F423125

General Info

Members Datasets Scaffolds Average Seq Length
363 236 327 503

Family's Representative Sequence

Representative Sequence 3300049705|Ga0501225_0000352|Ga0501225_0000352_320_1825
Length 480
Sequence VNQAESDQPGITPHFAPRAVDIPYVFARKHGVVMLPPEGERLTVAVREGSDPRVLLEVRRHLARSFDVRFVDGAQFDRHLSDHYAMEGSAATADDLLDSADDAPAIRLINGIIAEAARQGVSDIHIEPYETGLIVRMRIDGVLRETLRMPPHVAPVVVSRIKVMARLDIAERRVPQDGRVSTLPSRAGERVVLRILDKENAGMNLDLLGMAGAADRIFREGLQEPNGIILVTGPTGSGKTTTLYAGLRQLNDGTRNILTVEDPVEYAIEGVGQTQVNAKVGLTFAAGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAVGAITRMRDMRVEPFLLASTLRAVIAQRLVRRLCQHCREPVQADKSASALLGFDPGTIIYRARGCEECNGTGYKGRIGVFEAIRVDDTIRRLINDGGDESLIARHAFLNAPNLGSAARALVRDGQTTAEEAIRVSRRDAAEVETIGDG

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
3 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
4 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
5 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
6 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
7 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
8 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
9 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
10 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
11 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
12 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
13 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
14 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
15 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
16 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
17 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
18 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
19 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
20 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
21 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
22 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
23 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
24 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
25 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
26 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
27 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
28 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
29 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
30 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
31 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
32 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
33 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
34 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
35 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
36 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
37 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
38 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
39 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
40 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
41 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
42 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
43 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
44 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
45 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
46 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
47 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
48 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
49 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
50 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
51 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
52 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
53 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
54 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
55 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
56 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
57 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
58 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
59 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
60 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
61 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
62 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
63 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
64 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
65 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
66 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
67 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
68 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
69 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
70 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
71 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
72 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
73 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
74 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
75 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
76 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
77 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
78 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
79 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
80 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
81 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
82 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
83 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
84 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
85 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
86 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
87 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
88 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
89 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
90 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
91 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
92 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
93 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
94 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
95 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
96 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
98 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
137 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
141 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
142 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
143 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
144 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
145 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
146 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
147 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
148 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
149 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
150 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
151 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
152 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
153 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
154 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
155 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
156 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
157 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
158 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
159 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
162 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
163 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
164 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
165 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
166 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
167 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
168 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
169 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
170 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
171 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
172 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
173 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
174 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
175 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
176 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
177 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
178 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
179 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
180 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
181 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
182 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
183 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
184 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
185 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
186 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
187 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
188 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
189 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
190 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
191 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
192 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
193 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
194 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
195 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
196 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
197 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
198 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
205 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
206 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
207 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
208 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
209 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
210 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
212 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
213 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
214 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
215 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
216 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
217 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
218 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
219 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
220 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
221 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
222 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
223 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
224 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
225 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
226 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
227 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
228 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
229 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
230 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
231 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
232 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
233 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
234 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
235 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
236 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.08
Metatranscriptomes 0
Isolates 9.92

Biome Distribution

Category Percentage (%)
Aerial Root 1.38
Bulb 0
Endosphere 16.25
Nodule 0
Rhizoplane 5.23
Rhizosphere 64.46
Stem 0
Stem Tuber 0
Unclassified 12.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1003725 3300001904 Bacteria 2632
2 JGI24741J21665_1002118 3300001915 Bacteria 5289
3 JGI24752J21851_1001309 3300001976 Bacteria 3369
4 JGI24740J21852_10004987 3300001979 Bacteria 5639
5 JGI24739J22299_10000624 3300001989 Bacteria 12724
6 JGI24737J22298_10006928 3300001990 Bacteria 3846
7 JGI24735J21928_10006768 3300002067 Bacteria 3759
8 JGI24738J21930_10004494 3300002075 Bacteria 3408
9 JGI25165J46597_1000012 3300003214 Bacteria 421074
10 Ga0055536_1001149 3300003781 Bacteria 16552
11 Ga0055536_1003083 3300003781 Bacteria 9080
12 Ga0055536_1009987 3300003781 Bacteria 3837
13 Ga0055536_1022611 3300003781 Bacteria 1871
14 Ga0055530_10000737 3300003791 Bacteria 27278
15 Ga0055531_10012230 3300003794 Bacteria 4055
16 Ga0055531_10012954 3300003794 Bacteria 3881
17 Ga0065704_10080010 3300005289 Bacteria 4030
18 Ga0065704_10088368 3300005289 Bacteria 2945
19 Ga0065712_10005159 3300005290 Bacteria 6186
20 Ga0070670_100000568 3300005331 Bacteria 29308
21 Ga0070670_100006091 3300005331 Bacteria 10198
22 Ga0070677_10000140 3300005333 Bacteria 24374
23 Ga0070666_10000070 3300005335 Bacteria 75681
24 Ga0070666_10034542 3300005335 Bacteria 3351
25 Ga0068868_100000077 3300005338 Bacteria 58130
26 Ga0070660_100004806 3300005339 Bacteria 9345
27 Ga0070660_100059384 3300005339 Bacteria 2966
28 Ga0070661_100005431 3300005344 Bacteria 8787
29 Ga0070668_100000307 3300005347 Bacteria 32240
30 Ga0070668_100002546 3300005347 Bacteria 13412
31 Ga0070668_100010636 3300005347 Bacteria 6844
32 Ga0070668_100036447 3300005347 Bacteria 3754
33 Ga0070669_100000008 3300005353 Bacteria 226764
34 Ga0070669_100000193 3300005353 Bacteria 53850
35 Ga0070669_100014621 3300005353 Bacteria 5587
36 Ga0070675_100002969 3300005354 Bacteria 12807
37 Ga0070671_100000010 3300005355 Bacteria 202799
38 Ga0070671_100022525 3300005355 Bacteria 5144
39 Ga0070674_100067792 3300005356 Bacteria 2511
40 Ga0070673_100004246 3300005364 Bacteria 9036
41 Ga0070659_100000021 3300005366 Bacteria 154212
42 Ga0070667_100000204 3300005367 Bacteria 69734
43 Ga0070667_100003840 3300005367 Bacteria 12765
44 Ga0070667_100016506 3300005367 Bacteria 6111
45 Ga0070708_100227985 3300005445 Bacteria 1748
46 Ga0070663_100001697 3300005455 Bacteria 12231
47 Ga0070662_100015961 3300005457 Bacteria 5038
48 Ga0068853_100000753 3300005539 Bacteria 22451
49 Ga0070686_100000361 3300005544 Bacteria 29090
50 Ga0070665_100000011 3300005548 Bacteria 525539
51 Ga0070665_100000287 3300005548 Bacteria 79790
52 Ga0070665_100100332 3300005548 Bacteria 2899
53 Ga0070665_100114488 3300005548 Bacteria 2700
54 Ga0070664_100009065 3300005564 Bacteria 8073
55 Ga0068857_100010369 3300005577 Bacteria 8096
56 Ga0068854_100006390 3300005578 Bacteria 7495
57 Ga0068859_100000691 3300005617 Bacteria 33839
58 Ga0068859_100001119 3300005617 Bacteria 27381
59 Ga0068864_100000138 3300005618 Bacteria 69979
60 Ga0068864_100000244 3300005618 Bacteria 48603
61 Ga0068861_100000005 3300005719 Bacteria 101677
62 Ga0068861_100040331 3300005719 Bacteria 3491
63 Ga0068863_100000162 3300005841 Bacteria 71465
64 Ga0068863_100001710 3300005841 Bacteria 21716
65 Ga0068863_100008648 3300005841 Bacteria 9948
66 Ga0068858_100000279 3300005842 Bacteria 55120
67 Ga0068858_100000541 3300005842 Bacteria 39274
68 Ga0068858_100017323 3300005842 Bacteria 6757
69 Ga0068860_100000944 3300005843 Bacteria 32201
70 Ga0068860_100033402 3300005843 Bacteria 4937
71 Ga0068862_100000280 3300005844 Bacteria 56780
72 Ga0068862_100057032 3300005844 Bacteria 3348
73 Ga0081539_10023305 3300005985 Bacteria 4059
74 Ga0075368_10029127 3300006042 Bacteria 2134
75 Ga0075363_100014198 3300006048 Bacteria 3885
76 Ga0075370_10005621 3300006353 Bacteria 6254
77 Ga0097620_100000691 3300006931 Bacteria 33839
78 Ga0097620_100001119 3300006931 Bacteria 27381
79 Ga0105250_10031126 3300009092 Bacteria 2143
80 Ga0105247_10001561 3300009101 Bacteria 16302
81 Ga0105241_10027998 3300009174 Bacteria 4197
82 Ga0105248_10006913 3300009177 Bacteria 12435
83 Ga0105248_10020284 3300009177 Bacteria 7364
84 Ga0105238_10024930 3300009551 Bacteria 6095
85 Ga0105249_10000103 3300009553 Bacteria 118397
86 Ga0105249_10006841 3300009553 Bacteria 9942
87 Ga0105148_100031 3300009978 Bacteria 20228
88 Ga0157326_1001069 3300012513 Bacteria 3089
89 Ga0163163_10191375 3300014325 Bacteria 2094
90 Ga0183363_1005 3300015690 Bacteria 403020
91 Ga0163161_10037295 3300017792 Bacteria 3484
92 Ga0163161_10069865 3300017792 Bacteria 2567
93 Ga0213876_10012539 3300021384 Bacteria 4509
94 Ga0209147_102383 3300025229 Bacteria 4736
95 Ga0209233_1000058 3300025261 Bacteria 421872
96 Ga0209455_1007432 3300025272 Bacteria 3092
97 Ga0209675_1000082 3300025291 Bacteria 153550
98 Ga0209676_1000061 3300025292 Bacteria 332674
99 Ga0209676_1000130 3300025292 Bacteria 185796
100 Ga0209676_1000424 3300025292 Bacteria 74314
101 Ga0209676_1000567 3300025292 Bacteria 55724
102 Ga0209676_1001274 3300025292 Bacteria 26111
103 Ga0209050_1000017 3300025298 Bacteria 728928
104 Ga0209050_1004594 3300025298 Bacteria 9244
105 Ga0209050_1008587 3300025298 Bacteria 5413
106 Ga0209257_1000151 3300025304 Bacteria 191408
107 Ga0209257_1000178 3300025304 Bacteria 160969
108 Ga0209257_1000202 3300025304 Bacteria 147246
109 Ga0209257_1008234 3300025304 Bacteria 6008
110 Ga0207697_10001523 3300025315 Bacteria 12567
111 Ga0207696_1016674 3300025711 Bacteria 2453
112 Ga0207682_10000311 3300025893 Bacteria 22060
113 Ga0207710_10004059 3300025900 Bacteria 6441
114 Ga0207680_10001417 3300025903 Bacteria 11358
115 Ga0207680_10002393 3300025903 Bacteria 8740
116 Ga0207647_10004929 3300025904 Bacteria 9839
117 Ga0207645_10048450 3300025907 Bacteria 2713
118 Ga0207695_10051956 3300025913 Bacteria 4299
119 Ga0207657_10000743 3300025919 Bacteria 34553
120 Ga0207657_10006335 3300025919 Bacteria 12294
121 Ga0207649_10003515 3300025920 Bacteria 8565
122 Ga0207681_10000002 3300025923 Bacteria 985597
123 Ga0207681_10000176 3300025923 Bacteria 52358
124 Ga0207681_10017234 3300025923 Bacteria 4533
125 Ga0207681_10103124 3300025923 Bacteria 2061
126 Ga0207694_10006937 3300025924 Bacteria 8600
127 Ga0207650_10002362 3300025925 Bacteria 13124
128 Ga0207650_10003016 3300025925 Bacteria 11603
129 Ga0207659_10050200 3300025926 Bacteria 2963
130 Ga0207659_10075945 3300025926 Bacteria 2467
131 Ga0207644_10000002 3300025931 Bacteria 942221
132 Ga0207644_10005601 3300025931 Bacteria 8177
133 Ga0207644_10008193 3300025931 Bacteria 6846
134 Ga0207690_10000030 3300025932 Bacteria 156832
135 Ga0207690_10049499 3300025932 Bacteria 2802
136 Ga0207706_10026997 3300025933 Bacteria 5136
137 Ga0207711_10001542 3300025941 Bacteria 21367
138 Ga0207711_10059961 3300025941 Bacteria 3278
139 Ga0207661_10105011 3300025944 Bacteria 2380
140 Ga0207679_10005683 3300025945 Bacteria 7819
141 Ga0207651_10004891 3300025960 Bacteria 6833
142 Ga0207712_10000069 3300025961 Bacteria 127318
143 Ga0207712_10004105 3300025961 Bacteria 9191
144 Ga0207668_10000211 3300025972 Bacteria 39460
145 Ga0207668_10004306 3300025972 Bacteria 8359
146 Ga0207668_10006447 3300025972 Bacteria 6937
147 Ga0207658_10000170 3300025986 Bacteria 69794
148 Ga0207658_10002015 3300025986 Bacteria 15158
149 Ga0207658_10007876 3300025986 Bacteria 7255
150 Ga0207677_10000336 3300026023 Bacteria 33858
151 Ga0207703_10000447 3300026035 Bacteria 43512
152 Ga0207703_10000666 3300026035 Bacteria 34294
153 Ga0207639_10000705 3300026041 Bacteria 22908
154 Ga0207639_10012568 3300026041 Bacteria 5900
155 Ga0207639_10065701 3300026041 Bacteria 2817
156 Ga0207678_10001873 3300026067 Bacteria 19194
157 Ga0207641_10000225 3300026088 Bacteria 72580
158 Ga0207641_10002505 3300026088 Bacteria 16950
159 Ga0207641_10004144 3300026088 Bacteria 12633
160 Ga0207641_10017375 3300026088 Bacteria 5889
161 Ga0207676_10000526 3300026095 Bacteria 32146
162 Ga0207676_10002265 3300026095 Bacteria 13807
163 Ga0207674_10000984 3300026116 Bacteria 37235
164 Ga0207674_10036775 3300026116 Bacteria 5096
165 Ga0207675_100000020 3300026118 Bacteria 117374
166 Ga0207675_100000486 3300026118 Bacteria 38535
167 Ga0207698_10020565 3300026142 Bacteria 4545
168 Ga0209813_10000005 3300027866 Bacteria 128895
169 Ga0268266_10000058 3300028379 Bacteria 277346
170 Ga0268266_10062730 3300028379 Bacteria 3208
171 Ga0268266_10107328 3300028379 Bacteria 2469
172 Ga0268265_10000226 3300028380 Bacteria 65384
173 Ga0268265_10000739 3300028380 Bacteria 31842
174 Ga0268264_10000010 3300028381 Bacteria 596543
175 Ga0268264_10003898 3300028381 Bacteria 12784
176 Ga0307517_10016934 3300028786 Bacteria 9542
177 Ga0307513_10228531 3300031456 Bacteria 1675
178 Ga0307408_100010488 3300031548 Bacteria 6111
179 Ga0307408_100061461 3300031548 Bacteria 2742
180 Ga0307508_10001495 3300031616 Bacteria 26223
181 Ga0307405_10068299 3300031731 Bacteria 2274
182 Ga0307413_10015141 3300031824 Bacteria 3944
183 Ga0307413_10043007 3300031824 Bacteria 2659
184 Ga0307406_10020535 3300031901 Bacteria 3891
185 Ga0307406_10063296 3300031901 Bacteria 2395
186 Ga0307412_10006894 3300031911 Bacteria 6446
187 Ga0307412_10010465 3300031911 Bacteria 5343
188 Ga0307412_10014632 3300031911 Bacteria 4634
189 Ga0307412_10019037 3300031911 Bacteria 4146
190 Ga0307412_10049541 3300031911 Bacteria 2768
191 Ga0307412_10097318 3300031911 Bacteria 2073
192 Ga0307414_10000090 3300032004 Bacteria 78448
193 Ga0307414_10000100 3300032004 Bacteria 63343
194 Ga0307414_10005261 3300032004 Bacteria 7112
195 Ga0307414_10005993 3300032004 Bacteria 6737
196 Ga0307414_10013292 3300032004 Bacteria 4896
197 Ga0307414_10055643 3300032004 Bacteria 2771
198 Ga0307414_10058653 3300032004 Bacteria 2713
199 Ga0307411_10057156 3300032005 Bacteria 2575
200 Ga0307415_100003825 3300032126 Bacteria 7720
201 Ga0307415_100111778 3300032126 Bacteria 2029
202 Ga0395901_0041698 3300038443 Bacteria 4758
203 Ga0436365_1795953 3300039437 Bacteria 6129
204 Ga0451576_0022064 3300045051 Bacteria 6909
205 Ga0495617_005589 3300046452 Bacteria 4450
206 Ga0495627_000155 3300046453 Bacteria 79691
207 Ga0495638_0000016 3300046460 Bacteria 396505
208 Ga0495638_0028647 3300046460 Bacteria 3593
209 Ga0495650_0002375 3300046471 Bacteria 15450
210 Ga0495650_0017856 3300046471 Bacteria 3544
211 Ga0495607_0007045 3300046501 Bacteria 7819
212 Ga0495583_0000198 3300046506 Bacteria 101126
213 Ga0495583_0027577 3300046506 Bacteria 2802
214 Ga0495610_0000581 3300046512 Bacteria 36293
215 Ga0495616_0000030 3300046513 Bacteria 132950
216 Ga0495632_0000233 3300046519 Bacteria 55645
217 Ga0495632_0001618 3300046519 Bacteria 18487
218 Ga0495637_0000421 3300046520 Bacteria 31011
219 Ga0495637_0019564 3300046520 Bacteria 3129
220 Ga0495643_0000061 3300046522 Bacteria 185933
221 Ga0495648_0000101 3300046524 Bacteria 107124
222 Ga0495663_0000009 3300046525 Bacteria 256308
223 Ga0495598_0001490 3300046537 Bacteria 4657
224 Ga0495597_0032484 3300046542 Bacteria 2369
225 Ga0495633_0000264 3300046558 Bacteria 62296
226 Ga0495633_0000638 3300046558 Bacteria 32749
227 Ga0495668_0000031 3300046616 Bacteria 256576
228 Ga0495625_0000115 3300046660 Bacteria 122861
229 Ga0495625_0000263 3300046660 Bacteria 81813
230 Ga0495669_0000735 3300046684 Bacteria 14136
231 Ga0495671_0000036 3300046692 Bacteria 181192
232 Ga0495671_0000063 3300046692 Bacteria 106655
233 Ga0495677_0002730 3300047445 Bacteria 6898
234 Ga0495673_0000170 3300047469 Bacteria 106688
235 Ga0495681_0000006 3300047470 Bacteria 221565
236 Ga0495686_0000185 3300047472 Bacteria 116495
237 Ga0495686_0027282 3300047472 Bacteria 3730
238 Ga0495686_0030918 3300047472 Bacteria 3475
239 Ga0496100_0006359 3300048903 Bacteria 6436
240 Ga0496101_0001470 3300048904 Bacteria 14073
241 Ga0496102_0000049 3300048905 Bacteria 179480
242 Ga0496102_0000308 3300048905 Bacteria 62245
243 Ga0496103_0000021 3300048906 Bacteria 229062
244 Ga0496103_0000037 3300048906 Bacteria 179474
245 Ga0496104_0000131 3300048907 Bacteria 69658
246 Ga0496105_0000111 3300048908 Bacteria 55868
247 Ga0496108_0000661 3300048911 Bacteria 26566
248 Ga0496108_0021026 3300048911 Bacteria 5365
249 Ga0496108_0046914 3300048911 Bacteria 3611
250 Ga0496109_0051671 3300048912 Bacteria 3744
251 Ga0496109_0084676 3300048912 Bacteria 2925
252 Ga0496110_0006877 3300048913 Bacteria 9041
253 Ga0496110_0082383 3300048913 Bacteria 2869
254 Ga0496112_0000957 3300048915 Bacteria 21009
255 Ga0496113_0000112 3300048916 Bacteria 35072
256 Ga0496113_0045973 3300048916 Bacteria 3240
257 Ga0496116_0000664 3300048919 Bacteria 44805
258 Ga0496117_0000115 3300048920 Bacteria 179488
259 Ga0496117_0000284 3300048920 Bacteria 92675
260 Ga0496118_0000086 3300048921 Bacteria 179488
261 Ga0496118_0004782 3300048921 Bacteria 15825
262 Ga0496119_0000339 3300048922 Bacteria 65402
263 Ga0496119_0043367 3300048922 Bacteria 2843
264 Ga0496120_0000334 3300048923 Bacteria 78728
265 Ga0496120_0051293 3300048923 Bacteria 2357
266 Ga0496121_0001501 3300048924 Bacteria 39221
267 Ga0496122_0001206 3300048925 Bacteria 44057
268 Ga0496122_0005688 3300048925 Bacteria 14715
269 Ga0496122_0042409 3300048925 Bacteria 3581
270 Ga0496123_0000155 3300048926 Bacteria 139646
271 Ga0496123_0000367 3300048926 Bacteria 84634
272 Ga0496124_0000102 3300048927 Bacteria 179488
273 Ga0496124_0003977 3300048927 Bacteria 17619
274 Ga0496124_0018361 3300048927 Bacteria 6552
275 Ga0496125_0002033 3300048928 Bacteria 27406
276 Ga0496125_0034771 3300048928 Bacteria 4435
277 Ga0496125_0046543 3300048928 Bacteria 3638
278 Ga0496126_0000175 3300048929 Bacteria 146389
279 Ga0496126_0014780 3300048929 Bacteria 7875
280 Ga0496126_0027248 3300048929 Bacteria 5462
281 Ga0501032_0016872 3300049569 Bacteria 5132
282 Ga0501034_0018408 3300049571 Bacteria 7163
283 Ga0501037_0076309 3300049573 Bacteria 2433
284 Ga0501037_0110984 3300049573 Bacteria 1976
285 Ga0501038_0008554 3300049574 Bacteria 9398
286 Ga0501223_000071 3300049663 Bacteria 30564
287 Ga0501224_000023 3300049664 Bacteria 62414
288 Ga0501233_000966 3300049668 Bacteria 4877
289 Ga0501257_000046 3300049686 Bacteria 34691
290 Ga0501225_0000044 3300049705 Bacteria 41695
291 Ga0501225_0000077 3300049705 Bacteria 31868
292 Ga0501225_0000352 3300049705 Bacteria 14565
293 Ga0501035_0029587 3300049822 Bacteria 4995
294 Ga0501044_0031702 3300049823 Bacteria 5560
295 Ga0501226_000075 3300049853 Bacteria 30166
296 nmdc:mga06z11_24_c1 3300050494 Bacteria 67402
297 nmdc:mga0n895_41824_c1 3300050512 Bacteria 4456
298 nmdc:mga0sz30_24007_c1 3300050516 Bacteria 2486
299 Ga0500643_000139 3300053087 Bacteria 73348
300 Ga0500643_002363 3300053087 Bacteria 9844
301 Ga0500643_009279 3300053087 Bacteria 3767
302 Ga0500647_0020462 3300053091 Bacteria 3080
303 Ga0500556_0000031 3300053104 Bacteria 156000
304 Ga0500562_002297 3300053108 Bacteria 4790
305 Ga0500592_000190 3300053116 Bacteria 11718
306 Ga0500592_001906 3300053116 Bacteria 3353
307 Ga0500592_004585 3300053116 Bacteria 2196
308 Ga0500597_007683 3300053120 Bacteria 3672
309 Ga0500608_000566 3300053122 Bacteria 13807
310 Ga0500618_003672 3300053125 Bacteria 5182
311 Ga0500655_000067 3300053133 Bacteria 28296
312 Ga0500564_000123 3300053138 Bacteria 19609
313 Ga0500568_0000275 3300053139 Bacteria 43254
314 Ga0500604_0000040 3300053151 Bacteria 49952
315 Ga0500616_0000435 3300053153 Bacteria 55171
316 Ga0500616_0020796 3300053153 Bacteria 3685
317 Ga0500622_0017949 3300053156 Bacteria 3764
318 Ga0500624_000001 3300053157 Bacteria 284974
319 Ga0500624_000130 3300053157 Bacteria 32645
320 Ga0500624_001021 3300053157 Bacteria 5579
321 Ga0500627_0000003 3300053158 Bacteria 178186
322 Ga0500627_0000092 3300053158 Bacteria 30073
323 Ga0500636_0002382 3300053177 Bacteria 10413
324 Ga0500637_0000097 3300053178 Bacteria 31449
325 Ga0500570_000531 3300053724 Bacteria 14973
326 Ga0500625_000035 3300053729 Bacteria 47893
327 Ga0500645_000159 3300053730 Bacteria 52290

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2984555340 2984555589 438
2 3300001976 JGI24752J21851_1001309 JGI24752J21851_10013092 440
3 3300048912 Ga0496109_0084676 Ga0496109_0084676_28_1413 440
4 3300053120 Ga0500597_007683 Ga0500597_007683_41_1432 446
5 3300025944 Ga0207661_10105011 Ga0207661_101050112 448
6 3300017792 Ga0163161_10037295 Ga0163161_100372952 450
7 3300012513 Ga0157326_1001069 Ga0157326_10010692 454
8 3300005985 Ga0081539_10023305 Ga0081539_100233056 456
9 3300046501 Ga0495607_0007045 Ga0495607_0007045_6225_7661 456
10 3300005289 Ga0065704_10088368 Ga0065704_100883681 459
11 3300005347 Ga0070668_100002546 Ga0070668_1000025468 459
12 3300005353 Ga0070669_100000193 Ga0070669_10000019315 459
13 3300005367 Ga0070667_100003840 Ga0070667_1000038402 459
14 3300005548 Ga0070665_100114488 Ga0070665_1001144882 459
15 3300005844 Ga0068862_100057032 Ga0068862_1000570322 459
16 3300009092 Ga0105250_10031126 Ga0105250_100311261 459
17 3300025711 Ga0207696_1016674 Ga0207696_10166742 459
18 3300025923 Ga0207681_10000176 Ga0207681_1000017614 459
19 3300025931 Ga0207644_10008193 Ga0207644_100081931 459
20 3300025972 Ga0207668_10004306 Ga0207668_100043063 459
21 3300025986 Ga0207658_10002015 Ga0207658_100020158 459
22 3300028379 Ga0268266_10062730 Ga0268266_100627302 459
23 3300048903 Ga0496100_0006359 Ga0496100_0006359_3460_4953 459
24 3300048904 Ga0496101_0001470 Ga0496101_0001470_1860_3353 459
25 3300048905 Ga0496102_0000308 Ga0496102_0000308_50182_51675 459
26 3300048906 Ga0496103_0000021 Ga0496103_0000021_93097_94590 459
27 3300048907 Ga0496104_0000131 Ga0496104_0000131_37399_38892 459
28 3300048908 Ga0496105_0000111 Ga0496105_0000111_35198_36691 459
29 3300048915 Ga0496112_0000957 Ga0496112_0000957_6188_7681 459
30 3300048916 Ga0496113_0000112 Ga0496113_0000112_10594_12087 459
31 3300048920 Ga0496117_0000284 Ga0496117_0000284_11059_12552 459
32 3300048921 Ga0496118_0004782 Ga0496118_0004782_2038_3531 459
33 3300048922 Ga0496119_0000339 Ga0496119_0000339_24497_25990 459
34 3300048923 Ga0496120_0000334 Ga0496120_0000334_32811_34304 459
35 3300048925 Ga0496122_0001206 Ga0496122_0001206_18068_19561 459
36 3300048926 Ga0496123_0000367 Ga0496123_0000367_46567_48060 459
37 3300048927 Ga0496124_0003977 Ga0496124_0003977_12297_13790 459
38 3300048928 Ga0496125_0002033 Ga0496125_0002033_21811_23304 459
39 3300048929 Ga0496126_0000175 Ga0496126_0000175_134413_135906 459
40 3300005577 Ga0068857_100010369 Ga0068857_1000103692 461
41 3300032004 Ga0307414_10058653 Ga0307414_100586532 461
42 3300053157 Ga0500624_000001 Ga0500624_000001_37871_39355 463
43 3300053178 Ga0500637_0000097 Ga0500637_0000097_25453_26937 463
44 iso_pu_bacteria 2738541275 2738709896 464
45 iso_pu_bacteria 2738541301 2738848321 464
46 iso_pu_bacteria 2738541304 2738864050 464
47 iso_pu_bacteria 2738543022 2739296568 464
48 iso_pu_bacteria 2738543033 2739358246 464
49 iso_pu_bacteria 2928100450 2928101444 464
50 iso_pu_bacteria 2928959182 2928960145 464
51 3300009177 Ga0105248_10020284 Ga0105248_100202842 465
52 iso_pu_bacteria 2582581305 2585260361 467
53 3300005338 Ga0068868_100000077 Ga0068868_10000007726 468
54 3300005339 Ga0070660_100004806 Ga0070660_1000048062 468
55 3300005366 Ga0070659_100000021 Ga0070659_100000021136 468
56 3300025919 Ga0207657_10000743 Ga0207657_1000074328 468
57 3300025926 Ga0207659_10050200 Ga0207659_100502002 468
58 3300025932 Ga0207690_10000030 Ga0207690_10000030140 468
59 3300026023 Ga0207677_10000336 Ga0207677_1000033630 468
60 3300031824 Ga0307413_10015141 Ga0307413_100151414 470
61 3300038443 Ga0395901_0041698 Ga0395901_0041698_2352_3884 470
62 3300053091 Ga0500647_0020462 Ga0500647_0020462_981_2465 470
63 3300053125 Ga0500618_003672 Ga0500618_003672_1272_2756 470
64 3300053133 Ga0500655_000067 Ga0500655_000067_1279_2763 470
65 3300053156 Ga0500622_0017949 Ga0500622_0017949_77_1561 470
66 3300053724 Ga0500570_000531 Ga0500570_000531_12185_13669 470
67 3300053730 Ga0500645_000159 Ga0500645_000159_5044_6537 470
68 iso_pu_bacteria 2984564862 2984566297 470
69 3300031911 Ga0307412_10006894 Ga0307412_100068943 471
70 3300053116 Ga0500592_000190 Ga0500592_000190_7638_9146 471
71 3300053158 Ga0500627_0000092 Ga0500627_0000092_15361_16869 471
72 iso_pu_bacteria 2643221605 2644037256 471
73 3300005548 Ga0070665_100000011 Ga0070665_100000011496 472
74 3300028379 Ga0268266_10000058 Ga0268266_1000005834 472
75 3300045051 Ga0451576_0022064 Ga0451576_0022064_5054_6544 472
76 3300048929 Ga0496126_0027248 Ga0496126_0027248_1377_2921 472
77 3300031456 Ga0307513_10228531 Ga0307513_102285312 473
78 3300048924 Ga0496121_0001501 Ga0496121_0001501_35879_37393 473
79 3300048928 Ga0496125_0046543 Ga0496125_0046543_1351_2865 473
80 3300050494 nmdc:mga06z11_24_c1 nmdc:mga06z11_24_c1_10769_12283 473
81 iso_pu_bacteria 2643221699 2644547568 473
82 iso_pu_bacteria 2643221699 2644552856 473
83 iso_pu_bacteria 2941485952 2941486075 473
84 3300005333 Ga0070677_10000140 Ga0070677_100001403 474
85 3300005347 Ga0070668_100010636 Ga0070668_1000106362 474
86 3300005539 Ga0068853_100000753 Ga0068853_1000007535 474
87 3300005544 Ga0070686_100000361 Ga0070686_10000036114 474
88 3300005618 Ga0068864_100000138 Ga0068864_1000001382 474
89 3300005842 Ga0068858_100000541 Ga0068858_10000054119 474
90 3300025893 Ga0207682_10000311 Ga0207682_1000031123 474
91 3300025972 Ga0207668_10006447 Ga0207668_100064472 474
92 3300026035 Ga0207703_10000666 Ga0207703_1000066615 474
93 3300026041 Ga0207639_10000705 Ga0207639_100007055 474
94 3300026088 Ga0207641_10017375 Ga0207641_100173752 474
95 3300026095 Ga0207676_10000526 Ga0207676_1000052618 474
96 3300026116 Ga0207674_10000984 Ga0207674_100009845 474
97 3300032126 Ga0307415_100111778 Ga0307415_1001117782 474
98 3300046506 Ga0495583_0027577 Ga0495583_0027577_663_2219 474
99 3300048905 Ga0496102_0000049 Ga0496102_0000049_157653_159179 474
100 3300048906 Ga0496103_0000037 Ga0496103_0000037_20296_21822 474
101 3300048919 Ga0496116_0000664 Ga0496116_0000664_20023_21549 474
102 3300048920 Ga0496117_0000115 Ga0496117_0000115_157653_159179 474
103 3300048921 Ga0496118_0000086 Ga0496118_0000086_20310_21836 474
104 3300048922 Ga0496119_0043367 Ga0496119_0043367_573_2099 474
105 3300048923 Ga0496120_0051293 Ga0496120_0051293_30_1556 474
106 3300048927 Ga0496124_0000102 Ga0496124_0000102_20310_21836 474
107 3300050512 nmdc:mga0n895_41824_c1 nmdc:mga0n895_41824_c1_1036_2541 474
108 3300005841 Ga0068863_100001710 Ga0068863_10000171020 475
109 3300046542 Ga0495597_0032484 Ga0495597_0032484_583_2133 475
110 3300053104 Ga0500556_0000031 Ga0500556_0000031_11799_13349 475
111 3300053116 Ga0500592_001906 Ga0500592_001906_1235_2740 475
112 3300003781 Ga0055536_1022611 Ga0055536_10226112 476
113 3300021384 Ga0213876_10012539 Ga0213876_100125393 476
114 3300025292 Ga0209676_1000061 Ga0209676_100006147 476
115 3300025292 Ga0209676_1001274 Ga0209676_10012742 476
116 3300025298 Ga0209050_1008587 Ga0209050_10085872 476
117 3300025304 Ga0209257_1000178 Ga0209257_100017818 476
118 3300031901 Ga0307406_10020535 Ga0307406_100205352 476
119 3300031911 Ga0307412_10097318 Ga0307412_100973182 476
120 3300039437 Ga0436365_1795953 Ga0436365_1795953_3578_5101 476
121 3300053153 Ga0500616_0000435 Ga0500616_0000435_1309_2832 476
122 iso_pu_bacteria 2643221560 2643819698 476
123 iso_pu_bacteria 2643221563 2643834077 476
124 iso_pu_bacteria 2643221608 2644055003 476
125 iso_pu_bacteria 2852653556 2852654479 476
126 iso_pu_bacteria 2852680915 2852683970 476
127 3300005445 Ga0070708_100227985 Ga0070708_1002279851 477
128 3300050516 nmdc:mga0sz30_24007_c1 nmdc:mga0sz30_24007_c1_804_2348 478
129 3300053087 Ga0500643_009279 Ga0500643_009279_975_2507 478
130 3300009978 Ga0105148_100031 Ga0105148_10003118 479
131 3300053087 Ga0500643_000139 Ga0500643_000139_16853_18361 479
132 iso_pu_bacteria 2928027323 2928030618 479
133 iso_pu_bacteria 2993356040 2993357313 479
134 3300003781 Ga0055536_1001149 Ga0055536_100114911 480
135 3300003781 Ga0055536_1003083 Ga0055536_10030832 480
136 3300003781 Ga0055536_1009987 Ga0055536_10099872 480
137 3300003791 Ga0055530_10000737 Ga0055530_100007372 480
138 3300003794 Ga0055531_10012230 Ga0055531_100122302 480
139 3300003794 Ga0055531_10012954 Ga0055531_100129542 480
140 3300015690 Ga0183363_1005 Ga0183363_1005172 480
141 3300025291 Ga0209675_1000082 Ga0209675_1000082115 480
142 3300025292 Ga0209676_1000130 Ga0209676_1000130116 480
143 3300025292 Ga0209676_1000424 Ga0209676_100042456 480
144 3300025292 Ga0209676_1000567 Ga0209676_10005675 480
145 3300025298 Ga0209050_1000017 Ga0209050_1000017563 480
146 3300025298 Ga0209050_1004594 Ga0209050_10045944 480
147 3300025304 Ga0209257_1000151 Ga0209257_100015161 480
148 3300025304 Ga0209257_1000202 Ga0209257_100020281 480
149 3300025304 Ga0209257_1008234 Ga0209257_10082346 480
150 3300031911 Ga0307412_10010465 Ga0307412_100104657 480
151 3300031911 Ga0307412_10014632 Ga0307412_100146324 480
152 3300032004 Ga0307414_10000090 Ga0307414_100000905 480
153 3300032004 Ga0307414_10013292 Ga0307414_100132923 480
154 3300032004 Ga0307414_10055643 Ga0307414_100556432 480
155 3300046616 Ga0495668_0000031 Ga0495668_0000031_202369_203865 480
156 3300046660 Ga0495625_0000115 Ga0495625_0000115_45867_47360 480
157 3300049569 Ga0501032_0016872 Ga0501032_0016872_778_2271 480
158 3300049571 Ga0501034_0018408 Ga0501034_0018408_132_1625 480
159 3300049573 Ga0501037_0076309 Ga0501037_0076309_525_2018 480
160 3300049574 Ga0501038_0008554 Ga0501038_0008554_7525_9018 480
161 3300049705 Ga0501225_0000352 Ga0501225_0000352_320_1825 480
162 3300049822 Ga0501035_0029587 Ga0501035_0029587_239_1732 480
163 3300049823 Ga0501044_0031702 Ga0501044_0031702_1787_3280 480
164 3300053116 Ga0500592_004585 Ga0500592_004585_481_1977 480
165 3300053139 Ga0500568_0000275 Ga0500568_0000275_39752_41245 480
166 3300053158 Ga0500627_0000003 Ga0500627_0000003_142806_144302 480
167 3300005578 Ga0068854_100006390 Ga0068854_1000063902 481
168 3300025923 Ga0207681_10103124 Ga0207681_101031242 481
169 3300005335 Ga0070666_10034542 Ga0070666_100345422 482
170 3300005347 Ga0070668_100000307 Ga0070668_10000030712 482
171 3300005367 Ga0070667_100000204 Ga0070667_10000020456 482
172 3300005617 Ga0068859_100001119 Ga0068859_1000011192 482
173 3300005719 Ga0068861_100000005 Ga0068861_10000000533 482
174 3300005841 Ga0068863_100000162 Ga0068863_10000016263 482
175 3300005842 Ga0068858_100000279 Ga0068858_10000027953 482
176 3300005843 Ga0068860_100000944 Ga0068860_1000009444 482
177 3300005843 Ga0068860_100033402 Ga0068860_1000334022 482
178 3300005844 Ga0068862_100000280 Ga0068862_1000002803 482
179 3300006042 Ga0075368_10029127 Ga0075368_100291272 482
180 3300006048 Ga0075363_100014198 Ga0075363_1000141982 482
181 3300006353 Ga0075370_10005621 Ga0075370_100056215 482
182 3300006931 Ga0097620_100001119 Ga0097620_10000111924 482
183 3300009177 Ga0105248_10006913 Ga0105248_100069133 482
184 3300009553 Ga0105249_10000103 Ga0105249_1000010332 482
185 3300025903 Ga0207680_10002393 Ga0207680_100023932 482
186 3300025941 Ga0207711_10001542 Ga0207711_100015421 482
187 3300025961 Ga0207712_10000069 Ga0207712_1000006934 482
188 3300025972 Ga0207668_10000211 Ga0207668_1000021112 482
189 3300025986 Ga0207658_10000170 Ga0207658_1000017056 482
190 3300026035 Ga0207703_10000447 Ga0207703_100004477 482
191 3300026088 Ga0207641_10000225 Ga0207641_1000022561 482
192 3300026088 Ga0207641_10004144 Ga0207641_100041447 482
193 3300026118 Ga0207675_100000020 Ga0207675_10000002053 482
194 3300027866 Ga0209813_10000005 Ga0209813_1000000524 482
195 3300028380 Ga0268265_10000739 Ga0268265_100007393 482
196 3300028381 Ga0268264_10003898 Ga0268264_100038984 482
197 3300028786 Ga0307517_10016934 Ga0307517_100169347 482
198 3300046471 Ga0495650_0002375 Ga0495650_0002375_4310_5893 482
199 3300046471 Ga0495650_0017856 Ga0495650_0017856_396_1952 482
200 3300046537 Ga0495598_0001490 Ga0495598_0001490_972_2573 482
201 3300047445 Ga0495677_0002730 Ga0495677_0002730_1254_2855 482
202 3300053108 Ga0500562_002297 Ga0500562_002297_2411_3961 482
203 3300053157 Ga0500624_000130 Ga0500624_000130_22356_23957 482
204 iso_pu_bacteria 2739367664 2739650535 482
205 iso_pu_bacteria 2739367865 2740029008 482
206 iso_pu_bacteria 8057101203 8057105604 482
207 3300005289 Ga0065704_10080010 Ga0065704_100800104 483
208 3300005347 Ga0070668_100036447 Ga0070668_1000364473 483
209 3300031616 Ga0307508_10001495 Ga0307508_1000149519 483
210 3300048911 Ga0496108_0000661 Ga0496108_0000661_16777_18321 483
211 3300048925 Ga0496122_0042409 Ga0496122_0042409_1624_3171 483
212 3300048927 Ga0496124_0018361 Ga0496124_0018361_3129_4676 483
213 3300048929 Ga0496126_0014780 Ga0496126_0014780_339_1883 483
214 3300053122 Ga0500608_000566 Ga0500608_000566_11423_13024 483
215 3300053138 Ga0500564_000123 Ga0500564_000123_2905_4506 483
216 3300053729 Ga0500625_000035 Ga0500625_000035_30390_31991 483
217 3300032004 Ga0307414_10005261 Ga0307414_100052618 484
218 3300049686 Ga0501257_000046 Ga0501257_000046_12214_13770 484
219 iso_pu_bacteria 2599185354 2600202506 484
220 iso_pu_bacteria 2751185897 2753764299 484
221 3300003214 JGI25165J46597_1000012 JGI25165J46597_1000012358 485
222 3300009551 Ga0105238_10024930 Ga0105238_100249302 485
223 3300025261 Ga0209233_1000058 Ga0209233_100005860 485
224 3300025272 Ga0209455_1007432 Ga0209455_10074322 485
225 3300047472 Ga0495686_0000185 Ga0495686_0000185_72245_73810 486
226 3300053151 Ga0500604_0000040 Ga0500604_0000040_28422_30017 486
227 3300005290 Ga0065712_10005159 Ga0065712_100051597 487
228 3300005331 Ga0070670_100000568 Ga0070670_1000005686 487
229 3300005331 Ga0070670_100006091 Ga0070670_1000060919 487
230 3300005335 Ga0070666_10000070 Ga0070666_100000702 487
231 3300005344 Ga0070661_100005431 Ga0070661_1000054314 487
232 3300005353 Ga0070669_100000008 Ga0070669_100000008176 487
233 3300005353 Ga0070669_100014621 Ga0070669_1000146213 487
234 3300005354 Ga0070675_100002969 Ga0070675_1000029696 487
235 3300005355 Ga0070671_100000010 Ga0070671_10000001096 487
236 3300005355 Ga0070671_100022525 Ga0070671_1000225255 487
237 3300005356 Ga0070674_100067792 Ga0070674_1000677922 487
238 3300005364 Ga0070673_100004246 Ga0070673_1000042467 487
239 3300005367 Ga0070667_100016506 Ga0070667_1000165063 487
240 3300005457 Ga0070662_100015961 Ga0070662_1000159612 487
241 3300005548 Ga0070665_100000287 Ga0070665_10000028728 487
242 3300005548 Ga0070665_100100332 Ga0070665_1001003322 487
243 3300005564 Ga0070664_100009065 Ga0070664_1000090655 487
244 3300005617 Ga0068859_100000691 Ga0068859_10000069117 487
245 3300005618 Ga0068864_100000244 Ga0068864_10000024426 487
246 3300005719 Ga0068861_100040331 Ga0068861_1000403312 487
247 3300005841 Ga0068863_100008648 Ga0068863_1000086482 487
248 3300005842 Ga0068858_100017323 Ga0068858_1000173233 487
249 3300006931 Ga0097620_100000691 Ga0097620_10000069117 487
250 3300009101 Ga0105247_10001561 Ga0105247_100015612 487
251 3300009553 Ga0105249_10006841 Ga0105249_100068419 487
252 3300014325 Ga0163163_10191375 Ga0163163_101913752 487
253 3300017792 Ga0163161_10069865 Ga0163161_100698652 487
254 3300025315 Ga0207697_10001523 Ga0207697_1000152313 487
255 3300025900 Ga0207710_10004059 Ga0207710_100040593 487
256 3300025903 Ga0207680_10001417 Ga0207680_100014176 487
257 3300025907 Ga0207645_10048450 Ga0207645_100484502 487
258 3300025920 Ga0207649_10003515 Ga0207649_100035154 487
259 3300025923 Ga0207681_10000002 Ga0207681_10000002269 487
260 3300025923 Ga0207681_10017234 Ga0207681_100172343 487
261 3300025925 Ga0207650_10002362 Ga0207650_1000236212 487
262 3300025925 Ga0207650_10003016 Ga0207650_100030165 487
263 3300025926 Ga0207659_10075945 Ga0207659_100759452 487
264 3300025931 Ga0207644_10000002 Ga0207644_10000002267 487
265 3300025931 Ga0207644_10005601 Ga0207644_100056014 487
266 3300025933 Ga0207706_10026997 Ga0207706_100269972 487
267 3300025941 Ga0207711_10059961 Ga0207711_100599612 487
268 3300025945 Ga0207679_10005683 Ga0207679_100056835 487
269 3300025960 Ga0207651_10004891 Ga0207651_100048913 487
270 3300025961 Ga0207712_10004105 Ga0207712_100041058 487
271 3300025986 Ga0207658_10007876 Ga0207658_100078763 487
272 3300026088 Ga0207641_10002505 Ga0207641_100025058 487
273 3300026095 Ga0207676_10002265 Ga0207676_1000226512 487
274 3300026118 Ga0207675_100000486 Ga0207675_10000048612 487
275 3300028379 Ga0268266_10107328 Ga0268266_101073281 487
276 3300028380 Ga0268265_10000226 Ga0268265_100002264 487
277 3300028381 Ga0268264_10000010 Ga0268264_10000010485 487
278 3300031548 Ga0307408_100061461 Ga0307408_1000614612 487
279 3300031731 Ga0307405_10068299 Ga0307405_100682992 487
280 3300031824 Ga0307413_10043007 Ga0307413_100430072 487
281 3300031901 Ga0307406_10063296 Ga0307406_100632962 487
282 3300031911 Ga0307412_10049541 Ga0307412_100495412 487
283 3300032004 Ga0307414_10005993 Ga0307414_100059933 487
284 3300032005 Ga0307411_10057156 Ga0307411_100571562 487
285 3300032126 Ga0307415_100003825 Ga0307415_1000038256 487
286 3300046519 Ga0495632_0000233 Ga0495632_0000233_22186_23712 487
287 3300046520 Ga0495637_0000421 Ga0495637_0000421_13974_15500 487
288 3300046522 Ga0495643_0000061 Ga0495643_0000061_44212_45738 487
289 3300046525 Ga0495663_0000009 Ga0495663_0000009_31934_33460 487
290 3300046558 Ga0495633_0000264 Ga0495633_0000264_31051_32577 487
291 3300046558 Ga0495633_0000638 Ga0495633_0000638_9037_10563 487
292 3300046684 Ga0495669_0000735 Ga0495669_0000735_4330_5931 487
293 3300046692 Ga0495671_0000036 Ga0495671_0000036_44212_45738 487
294 3300047472 Ga0495686_0030918 Ga0495686_0030918_1642_3168 487
295 3300048911 Ga0496108_0046914 Ga0496108_0046914_373_1974 487
296 3300048912 Ga0496109_0051671 Ga0496109_0051671_1361_2962 487
297 3300048913 Ga0496110_0006877 Ga0496110_0006877_3221_4822 487
298 3300048925 Ga0496122_0005688 Ga0496122_0005688_452_2044 487
299 3300048926 Ga0496123_0000155 Ga0496123_0000155_12740_14332 487
300 3300048928 Ga0496125_0034771 Ga0496125_0034771_483_2069 487
301 3300049573 Ga0501037_0110984 Ga0501037_0110984_208_1776 487
302 3300053087 Ga0500643_002363 Ga0500643_002363_7577_9175 487
303 3300053157 Ga0500624_001021 Ga0500624_001021_1751_3292 487
304 3300053177 Ga0500636_0002382 Ga0500636_0002382_1945_3486 487
305 iso_pu_bacteria 2990265787 2990267535 487
306 iso_pu_bacteria 2993693658 2993695230 487
307 3300046460 Ga0495638_0000016 Ga0495638_0000016_58592_60220 488
308 3300046460 Ga0495638_0028647 Ga0495638_0028647_298_1884 488
309 3300046506 Ga0495583_0000198 Ga0495583_0000198_53314_54942 488
310 3300046519 Ga0495632_0001618 Ga0495632_0001618_13476_15104 488
311 3300046524 Ga0495648_0000101 Ga0495648_0000101_58338_59966 488
312 3300046660 Ga0495625_0000263 Ga0495625_0000263_36740_38329 488
313 3300046692 Ga0495671_0000063 Ga0495671_0000063_46384_48012 488
314 3300047469 Ga0495673_0000170 Ga0495673_0000170_46474_48102 488
315 3300053153 Ga0500616_0020796 Ga0500616_0020796_1009_2598 488
316 iso_pu_bacteria 2512564014 2512645292 488
317 iso_pu_bacteria 2830075706 2830076645 488
318 iso_pu_bacteria 2946787523 2946789034 488
319 3300025229 Ga0209147_102383 Ga0209147_1023832 490
320 3300026041 Ga0207639_10065701 Ga0207639_100657012 490
321 3300032004 Ga0307414_10000100 Ga0307414_1000010053 490
322 3300046520 Ga0495637_0019564 Ga0495637_0019564_904_2439 490
323 3300049663 Ga0501223_000071 Ga0501223_000071_8233_9780 490
324 3300049664 Ga0501224_000023 Ga0501224_000023_8227_9774 490
325 3300049668 Ga0501233_000966 Ga0501233_000966_577_2124 490
326 3300049705 Ga0501225_0000077 Ga0501225_0000077_27850_29397 490
327 3300049853 Ga0501226_000075 Ga0501226_000075_20491_22038 490
328 3300001904 JGI24736J21556_1003725 JGI24736J21556_10037252 493
329 3300001915 JGI24741J21665_1002118 JGI24741J21665_10021184 493
330 3300001979 JGI24740J21852_10004987 JGI24740J21852_100049873 493
331 3300001989 JGI24739J22299_10000624 JGI24739J22299_100006242 493
332 3300001990 JGI24737J22298_10006928 JGI24737J22298_100069282 493
333 3300002067 JGI24735J21928_10006768 JGI24735J21928_100067682 493
334 3300002075 JGI24738J21930_10004494 JGI24738J21930_100044942 493
335 3300005339 Ga0070660_100059384 Ga0070660_1000593841 493
336 3300005455 Ga0070663_100001697 Ga0070663_1000016978 493
337 3300009174 Ga0105241_10027998 Ga0105241_100279985 493
338 3300025904 Ga0207647_10004929 Ga0207647_100049294 493
339 3300025913 Ga0207695_10051956 Ga0207695_100519562 493
340 3300025919 Ga0207657_10006335 Ga0207657_100063358 493
341 3300025924 Ga0207694_10006937 Ga0207694_100069372 493
342 3300025932 Ga0207690_10049499 Ga0207690_100494992 493
343 3300026041 Ga0207639_10012568 Ga0207639_100125683 493
344 3300026067 Ga0207678_10001873 Ga0207678_100018739 493
345 3300026116 Ga0207674_10036775 Ga0207674_100367752 493
346 3300026142 Ga0207698_10020565 Ga0207698_100205653 493
347 3300031548 Ga0307408_100010488 Ga0307408_1000104882 493
348 3300031911 Ga0307412_10019037 Ga0307412_100190375 493
349 3300046452 Ga0495617_005589 Ga0495617_005589_2003_3547 493
350 3300046453 Ga0495627_000155 Ga0495627_000155_41924_43468 493
351 3300046512 Ga0495610_0000581 Ga0495610_0000581_12886_14538 493
352 3300046513 Ga0495616_0000030 Ga0495616_0000030_116119_117699 493
353 3300047470 Ga0495681_0000006 Ga0495681_0000006_15635_17179 493
354 3300047472 Ga0495686_0027282 Ga0495686_0027282_1627_3171 493
355 3300048911 Ga0496108_0021026 Ga0496108_0021026_1241_2785 493
356 3300048913 Ga0496110_0082383 Ga0496110_0082383_114_1658 493
357 3300048916 Ga0496113_0045973 Ga0496113_0045973_116_1660 493
358 3300049705 Ga0501225_0000044 Ga0501225_0000044_33811_35355 493
359 iso_pu_bacteria 2808606404 2809078101 493
360 iso_pu_bacteria 2808606405 2809082191 493
361 iso_pu_bacteria 2880518877 2880519677 493
362 iso_pu_bacteria 2885429604 2885431201 493
363 iso_pu_bacteria 2919709256 2919709922 493

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00437

T2SSE

Type II/IV secretion system protein

110

365

0.99

PF22341

GSPE_N1E

GSPII protein E, N1E domain

21

84

0.98

PF05157

MshEN

MshEN domain

8

90

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2bh1-assembly2.cif.gz_Y x-ray structure of the general secretion pathway complex of the n- terminal domain of epse and the cytosolic domain of epsl of vibrio cholerae 0.8904 21 84
5tsh-assembly1.cif.gz_E pilb from geobacter metallireducens bound to amp-pnp 0.855 104 479
5tsg-assembly1.cif.gz_C-2 pilb from geobacter metallireducens bound to adp 0.8487 104 478
5tsg-assembly1.cif.gz_B-2 pilb from geobacter metallireducens bound to adp 0.8484 104 479
5tsh-assembly1.cif.gz_F pilb from geobacter metallireducens bound to amp-pnp 0.8424 103 479
ID Description Score Start End Superfamily
5oiuB01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9633 103 207 3.30.450.90
af_P36645_64_185_3.30.450.90 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9546 104 209 3.30.450.90
5tshE01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9527 104 207 3.30.450.90
5oiuB01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9373 103 207 3.30.450.90
af_Q2FY30_1_105_3.30.450.90 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.93 108 209 3.30.450.90
ID Description Score Start End GO Terms
AF-A0A378BEZ9-F1-model_v4 General secretion pathway protein E 0.9655 337 469 GO:0005524
GO:0005886
GO:0015627
GO:0015628
GO:0016887
AF-A0A7V5CKK8-F1-model_v4 Bacterial type II secretion system protein E domain-containing protein 0.9638 105 209
AF-A0A351SBW4-F1-model_v4 Secretion system protein E 0.9627 312 479 GO:0005524
GO:0005886
GO:0016887
AF-A0A317Z3R7-F1-model_v4 Competence protein ComGA 0.9408 108 212
AF-A0A2N6CEC5-F1-model_v4 deleted 0.9397 310 478

Feature Viewer

pLDDT pTM Quality
79.78 0.6 Medium
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Predicted Structure (AlphaFold2)

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