F422045

General Info

Members Datasets Scaffolds Average Seq Length
360 198 720 211

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2554235005|2554257387
Length 250
Sequence DAATGGNVTSEDVSTRSGTGRPTTERLDGAPVVADEVGTCPPVTLLIVDDHPVVRDGLRGMFAADPGFHVLGEASGGVEGVRLALRLDPDVVLMDLRMPAGSGVEAIAELSRLGARAKVLVLTTYDTDSDTIPAIEAGATGYLLKDAPRADLFAAVRAAAEGRTVLSPAVASRLFSAVRKPAVPAGETLSAREREVVELVAKGMSNREIARELFISEATVKTHLTHLYGKLGVKDRAAAVAVAYDRGILG

Samples

Sample ID Description Type Environment
1 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
33 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
34 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
35 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
51 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
52 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
53 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
56 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
66 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
67 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
68 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
69 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
79 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
80 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
81 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
82 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
83 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
84 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
85 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
86 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
87 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
88 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
89 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
90 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
91 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
92 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
93 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
94 3300042117 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0415F_E14_082316_1937 Metagenome Rhizosphere
95 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
96 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
97 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
98 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
99 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
100 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
101 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
102 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
103 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
104 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
105 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
110 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
156 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
165 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
168 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
172 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
173 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
174 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
175 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
176 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
177 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
178 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
179 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
180 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
181 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
182 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
183 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
184 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
185 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
186 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
187 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
188 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
189 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
190 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
191 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
192 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
193 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
194 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
195 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
196 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
197 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
198 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.67
Metatranscriptomes 0
Isolates 8.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.11
Nodule 0
Rhizoplane 3.06
Rhizosphere 86.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10004799 3300002067 Bacteria 4514
2 JGI24751J29686_10003588 3300002459 Bacteria 3128
3 JGI25406J46586_10023907 3300003203 Bacteria 2406
4 JGI25407J50210_10009700 3300003373 Bacteria 2443
5 JGI25407J50210_10027268 3300003373 Bacteria 1481
6 JGI25407J50210_10073631 3300003373 Bacteria 852
7 Ga0070680_100366136 3300005336 Bacteria 1226
8 Ga0070667_100036528 3300005367 Bacteria 4119
9 Ga0070667_100676879 3300005367 Bacteria 953
10 Ga0070709_10000545 3300005434 Bacteria 22076
11 Ga0070709_10006945 3300005434 Bacteria 6180
12 Ga0070714_100007804 3300005435 Bacteria 8336
13 Ga0070713_100000681 3300005436 Bacteria 21792
14 Ga0070713_100002145 3300005436 Bacteria 12755
15 Ga0070713_100234033 3300005436 Bacteria 1671
16 Ga0070710_10000294 3300005437 Bacteria 23644
17 Ga0070711_100003185 3300005439 Bacteria 9525
18 Ga0070711_100018872 3300005439 Bacteria 4411
19 Ga0070706_100027617 3300005467 Bacteria 5222
20 Ga0070698_100003445 3300005471 Bacteria 17402
21 Ga0068854_100355723 3300005578 Bacteria 1200
22 Ga0068852_100358350 3300005616 Bacteria 1426
23 Ga0068859_100542225 3300005617 Bacteria 1258
24 Ga0068860_100509224 3300005843 Bacteria 1202
25 Ga0081455_10011170 3300005937 Bacteria 9039
26 Ga0081455_10035220 3300005937 Bacteria 4476
27 Ga0081455_10065361 3300005937 Bacteria 3042
28 Ga0081538_10000512 3300005981 Bacteria 43332
29 Ga0081538_10000805 3300005981 Bacteria 34030
30 Ga0081538_10001385 3300005981 Bacteria 24857
31 Ga0081538_10002246 3300005981 Bacteria 19116
32 Ga0081538_10007916 3300005981 Bacteria 9102
33 Ga0081538_10015374 3300005981 Bacteria 5928
34 Ga0081538_10045652 3300005981 Bacteria 2713
35 Ga0081538_10060646 3300005981 Bacteria 2173
36 Ga0081539_10005827 3300005985 Bacteria 12241
37 Ga0081539_10104145 3300005985 Bacteria 1441
38 Ga0081539_10139314 3300005985 Bacteria 1181
39 Ga0070717_10007805 3300006028 Bacteria 7961
40 Ga0070717_10036795 3300006028 Bacteria 3972
41 Ga0070715_10012027 3300006163 Bacteria 3134
42 Ga0070712_100008252 3300006175 Bacteria 6544
43 Ga0070712_100049892 3300006175 Bacteria 2909
44 Ga0075428_100000326 3300006844 Bacteria 47360
45 Ga0075428_101019992 3300006844 Bacteria 876
46 Ga0075430_100105069 3300006846 Bacteria 2357
47 Ga0075431_100147958 3300006847 Bacteria 2419
48 Ga0075431_100256083 3300006847 Bacteria 1777
49 Ga0075433_10892940 3300006852 Bacteria 775
50 Ga0097620_100542271 3300006931 Bacteria 1258
51 Ga0111539_10265658 3300009094 Bacteria 1997
52 Ga0111539_10439050 3300009094 Bacteria 1520
53 Ga0114129_10033715 3300009147 Bacteria 7234
54 Ga0114129_10933256 3300009147 Bacteria 1097
55 Ga0157375_10232132 3300013308 Bacteria 2004
56 Ga0157377_10858755 3300014745 Bacteria 675
57 Ga0209758_1001752 3300025297 Bacteria 24130
58 Ga0207426_1031527 3300025302 Bacteria 1729
59 Ga0207692_10000490 3300025898 Bacteria 13982
60 Ga0207685_10085175 3300025905 Bacteria 1318
61 Ga0207699_10000639 3300025906 Bacteria 16976
62 Ga0207699_10011378 3300025906 Bacteria 4492
63 Ga0207684_10023787 3300025910 Bacteria 5229
64 Ga0207693_10001538 3300025915 Bacteria 20379
65 Ga0207693_10056298 3300025915 Bacteria 3083
66 Ga0207663_10005857 3300025916 Bacteria 6234
67 Ga0207659_10361963 3300025926 Bacteria 1206
68 Ga0207700_10001861 3300025928 Bacteria 11960
69 Ga0207700_10008128 3300025928 Bacteria 6478
70 Ga0207664_10000374 3300025929 Bacteria 32561
71 Ga0207665_10002156 3300025939 Bacteria 13326
72 Ga0207640_10284970 3300025981 Bacteria 1300
73 Ga0207658_10633289 3300025986 Bacteria 963
74 Ga0207703_10246479 3300026035 Bacteria 1608
75 Ga0268266_10082178 3300028379 Bacteria 2810
76 Ga0268266_10578422 3300028379 Bacteria 1078
77 Ga0268264_10165229 3300028381 Bacteria 1997
78 Ga0307515_10024229 3300028794 Bacteria 10585
79 Ga0307515_10156490 3300028794 Bacteria 2349
80 Ga0307515_10264993 3300028794 Bacteria 1448
81 Ga0314311_1034832 3300030733 Bacteria 789
82 Ga0307513_10212663 3300031456 Bacteria 1763
83 Ga0307509_10074113 3300031507 Bacteria 3542
84 Ga0307408_100203415 3300031548 Bacteria 1604
85 Ga0307514_10030943 3300031649 Bacteria 4293
86 Ga0307514_10378205 3300031649 Bacteria 737
87 Ga0307405_10056436 3300031731 Bacteria 2463
88 Ga0307405_10098791 3300031731 Bacteria 1952
89 Ga0307405_10160888 3300031731 Bacteria 1590
90 Ga0307413_10143349 3300031824 Bacteria 1654
91 Ga0307413_10216301 3300031824 Bacteria 1396
92 Ga0307518_10052019 3300031838 Bacteria 2975
93 Ga0307410_10003730 3300031852 Bacteria 7714
94 Ga0307410_10418510 3300031852 Bacteria 1086
95 Ga0307410_10497815 3300031852 Bacteria 1002
96 Ga0307406_10026800 3300031901 Bacteria 3465
97 Ga0307406_10086205 3300031901 Bacteria 2102
98 Ga0307406_10301983 3300031901 Bacteria 1230
99 Ga0307406_10916597 3300031901 Bacteria 747
100 Ga0307412_10197023 3300031911 Bacteria 1527
101 Ga0307409_100104998 3300031995 Bacteria 2354
102 Ga0307409_100107641 3300031995 Bacteria 2329
103 Ga0307409_101048218 3300031995 Bacteria 835
104 Ga0307409_101301602 3300031995 Bacteria 752
105 Ga0307416_100001008 3300032002 Bacteria 14928
106 Ga0307416_100011398 3300032002 Bacteria 5926
107 Ga0307416_100202823 3300032002 Bacteria 1883
108 Ga0307416_100465280 3300032002 Bacteria 1321
109 Ga0307416_100849926 3300032002 Bacteria 1011
110 Ga0307416_100924188 3300032002 Bacteria 973
111 Ga0307415_100000540 3300032126 Bacteria 16517
112 Ga0307415_100021798 3300032126 Bacteria 3945
113 Ga0307415_100034486 3300032126 Bacteria 3296
114 Ga0307415_100125130 3300032126 Bacteria 1936
115 Ga0307415_100210309 3300032126 Bacteria 1551
116 Ga0307415_100247489 3300032126 Bacteria 1446
117 Ga0307415_100287533 3300032126 Bacteria 1355
118 Ga0307415_100487198 3300032126 Bacteria 1075
119 Ga0307507_10037180 3300033179 Bacteria 4959
120 Ga0373948_0024749 3300034817 Bacteria 1173
121 Ga0373940_0012747 3300035088 Bacteria 2019
122 Ga0373941_0013942 3300035115 Bacteria 2136
123 Ga0373942_0002469 3300035207 Bacteria 4483
124 Ga0373935_0102728 3300035692 Bacteria 1886
125 Ga0395899_0128619 3300037312 Bacteria 1810
126 Ga0395900_0072977 3300037418 Bacteria 3528
127 Ga0395900_0125203 3300037418 Bacteria 2636
128 Ga0395900_0235972 3300037418 Bacteria 1837
129 Ga0395898_0016012 3300037466 Bacteria 7679
130 Ga0395898_0033612 3300037466 Bacteria 5116
131 Ga0395905_0024255 3300037471 Bacteria 5725
132 Ga0436364_0272204 3300037853 Bacteria 1481
133 Ga0395901_0252016 3300038443 Bacteria 1839
134 Ga0395901_0269525 3300038443 Bacteria 1771
135 Ga0395901_0852501 3300038443 Bacteria 896
136 Ga0436365_1223028 3300039437 Bacteria 1921
137 Ga0439438_057498 3300041405 Bacteria 978
138 Ga0451837_1280867 3300041494 Bacteria 917
139 Ga0451839_1627744 3300041496 Bacteria 734
140 Ga0451843_1370068 3300041509 Bacteria 621
141 Ga0451855_1550856 3300041511 Bacteria 1210
142 Ga0451853_0238892 3300041512 Bacteria 2978
143 Ga0451853_3502965 3300041512 Bacteria 983
144 Ga0439433_0095475 3300041999 Bacteria 734
145 Ga0439443_022717 3300042003 Bacteria 997
146 Ga0439445_0157017 3300042004 Bacteria 664
147 Ga0439448_0102513 3300042005 Bacteria 973
148 Ga0439448_0148079 3300042005 Bacteria 814
149 Ga0439449_0071162 3300042007 Bacteria 1281
150 Ga0439449_0125689 3300042007 Bacteria 952
151 Ga0439450_002567 3300042008 Bacteria 2876
152 Ga0439454_014331 3300042011 Bacteria 1098
153 Ga0439456_012131 3300042013 Bacteria 1786
154 Ga0439463_010537 3300042016 Bacteria 2270
155 Ga0450912_005068 3300042116 Bacteria 1000
156 Ga0450913_000684 3300042117 Bacteria 1565
157 Ga0450915_000068 3300042119 Bacteria 2182
158 Ga0450917_004226 3300042120 Bacteria 1046
159 Ga0450902_009901 3300042137 Bacteria 1505
160 Ga0450905_012496 3300042142 Bacteria 1196
161 Ga0439435_0030102 3300042436 Bacteria 1470
162 Ga0439444_0001705 3300042437 Bacteria 2899
163 Ga0439464_0005635 3300042439 Bacteria 3242
164 Ga0439464_0040243 3300042439 Bacteria 1331
165 Ga0439460_0006419 3300042461 Bacteria 2915
166 Ga0450916_007234 3300042530 Bacteria 1328
167 Ga0439440_0100216 3300042993 Bacteria 787
168 Ga0466972_0007901 3300044658 Bacteria 5334
169 Ga0466966_0016331 3300044684 Bacteria 4907
170 Ga0466961_0017838 3300044693 Bacteria 4562
171 Ga0453684_0001942 3300044712 Bacteria 53308
172 Ga0453684_0006722 3300044712 Bacteria 21672
173 Ga0453684_0018110 3300044712 Bacteria 10842
174 Ga0453684_0025168 3300044712 Bacteria 8652
175 Ga0453684_0029570 3300044712 Bacteria 7774
176 Ga0466971_0047095 3300044719 Bacteria 1938
177 Ga0466968_0012792 3300044735 Bacteria 3292
178 Ga0466967_0128342 3300045976 Bacteria 2351
179 Ga0495592_0043380 3300046454 Bacteria 3365
180 Ga0495603_0040115 3300046455 Bacteria 2803
181 Ga0495629_0196402 3300046459 Bacteria 1395
182 Ga0495618_0049698 3300046514 Bacteria 2649
183 Ga0495676_0327764 3300047321 Bacteria 1027
184 Ga0495680_0046127 3300047322 Bacteria 3437
185 Ga0495602_0532938 3300048088 Bacteria 816
186 Ga0496100_0008943 3300048903 Bacteria 5602
187 Ga0496101_0006561 3300048904 Bacteria 7494
188 Ga0496102_0007860 3300048905 Bacteria 9112
189 Ga0496104_0004343 3300048907 Bacteria 12331
190 Ga0496106_0074126 3300048909 Bacteria 2605
191 Ga0496108_0000414 3300048911 Bacteria 34876
192 Ga0496108_0023653 3300048911 Bacteria 5057
193 Ga0496109_0004091 3300048912 Bacteria 12192
194 Ga0496110_0018222 3300048913 Bacteria 5884
195 Ga0496114_0000440 3300048917 Bacteria 30614
196 Ga0496117_0053920 3300048920 Bacteria 2821
197 Ga0501031_0002238 3300049568 Bacteria 12238
198 Ga0501031_0064798 3300049568 Bacteria 2380
199 Ga0501031_0141951 3300049568 Bacteria 1570
200 Ga0501031_0169190 3300049568 Bacteria 1428
201 Ga0501031_0401503 3300049568 Bacteria 886
202 Ga0501032_0027146 3300049569 Bacteria 3936
203 Ga0501032_0065486 3300049569 Bacteria 2430
204 Ga0501032_0509874 3300049569 Bacteria 768
205 Ga0501033_0193451 3300049570 Bacteria 1455
206 Ga0501034_0445285 3300049571 Bacteria 1213
207 Ga0501036_0000588 3300049572 Bacteria 26323
208 Ga0501036_0004091 3300049572 Bacteria 11743
209 Ga0501036_0102647 3300049572 Bacteria 2419
210 Ga0501036_0344272 3300049572 Bacteria 1245
211 Ga0501037_0054836 3300049573 Bacteria 2915
212 Ga0501037_0141354 3300049573 Bacteria 1722
213 Ga0501037_0143058 3300049573 Bacteria 1711
214 Ga0501038_0006976 3300049574 Bacteria 10431
215 Ga0501038_0012502 3300049574 Bacteria 7756
216 Ga0501038_0012561 3300049574 Bacteria 7738
217 Ga0501039_0000632 3300049575 Bacteria 25452
218 Ga0501039_0035056 3300049575 Bacteria 3873
219 Ga0501039_0087672 3300049575 Bacteria 2424
220 Ga0501040_0000179 3300049576 Bacteria 36114
221 Ga0501040_0001242 3300049576 Bacteria 16193
222 Ga0501040_0069017 3300049576 Bacteria 2438
223 Ga0501040_0189153 3300049576 Bacteria 1460
224 Ga0501040_0332672 3300049576 Bacteria 1087
225 Ga0501040_0355093 3300049576 Bacteria 1050
226 Ga0501041_0006636 3300049577 Bacteria 6779
227 Ga0501041_0063715 3300049577 Bacteria 2257
228 Ga0501041_0074532 3300049577 Bacteria 2085
229 Ga0501041_0455459 3300049577 Bacteria 812
230 Ga0501042_0000030 3300049578 Bacteria 46210
231 Ga0501042_0002377 3300049578 Bacteria 11533
232 Ga0501042_0042808 3300049578 Bacteria 3224
233 Ga0501042_0043875 3300049578 Bacteria 3185
234 Ga0501042_0062321 3300049578 Bacteria 2664
235 Ga0501043_0017326 3300049579 Bacteria 5652
236 Ga0501043_0051836 3300049579 Bacteria 3224
237 Ga0501043_0190871 3300049579 Bacteria 1593
238 Ga0501046_0000637 3300049580 Bacteria 34276
239 Ga0501046_0011010 3300049580 Bacteria 7752
240 Ga0501046_0028240 3300049580 Bacteria 4571
241 Ga0501046_0062136 3300049580 Bacteria 2919
242 Ga0501047_0034543 3300049581 Bacteria 4882
243 Ga0501047_0424484 3300049581 Bacteria 1161
244 Ga0501048_0000469 3300049582 Bacteria 28350
245 Ga0501048_0000527 3300049582 Bacteria 26925
246 Ga0501048_0355366 3300049582 Bacteria 1045
247 Ga0501048_0411778 3300049582 Bacteria 967
248 Ga0501048_0446312 3300049582 Bacteria 926
249 Ga0501068_0082434 3300049584 Bacteria 1975
250 Ga0501068_0115485 3300049584 Bacteria 1671
251 Ga0501069_0033737 3300049585 Bacteria 2820
252 Ga0501070_0221853 3300049586 Bacteria 1550
253 Ga0501070_0373103 3300049586 Bacteria 1156
254 Ga0501070_0923406 3300049586 Bacteria 680
255 Ga0501071_0001894 3300049587 Bacteria 12442
256 Ga0501071_0004320 3300049587 Bacteria 9010
257 Ga0501071_0035491 3300049587 Bacteria 3551
258 Ga0501071_0037442 3300049587 Bacteria 3464
259 Ga0501072_0000401 3300049588 Bacteria 31057
260 Ga0501072_0005541 3300049588 Bacteria 9600
261 Ga0501072_0052137 3300049588 Bacteria 3221
262 Ga0501072_0089126 3300049588 Bacteria 2448
263 Ga0501072_0145742 3300049588 Bacteria 1888
264 Ga0501074_0001602 3300049590 Bacteria 15349
265 Ga0501074_0114748 3300049590 Bacteria 1927
266 Ga0501075_0002151 3300049591 Bacteria 13047
267 Ga0501075_0003136 3300049591 Bacteria 11054
268 Ga0501075_0011030 3300049591 Bacteria 6378
269 Ga0501075_0025914 3300049591 Bacteria 4310
270 Ga0501075_0043611 3300049591 Bacteria 3364
271 Ga0501075_0183109 3300049591 Bacteria 1598
272 Ga0501076_0001682 3300049592 Bacteria 14942
273 Ga0501076_0002464 3300049592 Bacteria 12718
274 Ga0501076_0037085 3300049592 Bacteria 3822
275 Ga0501076_0055679 3300049592 Bacteria 3136
276 Ga0501076_0191856 3300049592 Bacteria 1667
277 Ga0501077_0001349 3300049593 Bacteria 14778
278 Ga0501077_0004975 3300049593 Bacteria 8062
279 Ga0501077_0052191 3300049593 Bacteria 2597
280 Ga0501079_0000605 3300049741 Bacteria 23765
281 Ga0501079_0002882 3300049741 Bacteria 12555
282 Ga0501079_0035534 3300049741 Bacteria 3836
283 Ga0501079_0081000 3300049741 Bacteria 2510
284 Ga0501079_0117786 3300049741 Bacteria 2064
285 Ga0501080_0074739 3300049742 Bacteria 3152
286 Ga0501080_0121337 3300049742 Bacteria 2422
287 Ga0501080_0292145 3300049742 Bacteria 1480
288 Ga0501080_0470282 3300049742 Bacteria 1125
289 Ga0501080_0610266 3300049742 Bacteria 968
290 Ga0501081_0031789 3300049743 Bacteria 3577
291 Ga0501081_0092756 3300049743 Bacteria 2125
292 Ga0501081_0115319 3300049743 Bacteria 1909
293 Ga0501081_0129373 3300049743 Bacteria 1803
294 Ga0501083_0032288 3300049744 Bacteria 3592
295 Ga0501083_0352660 3300049744 Bacteria 956
296 Ga0501035_0059952 3300049822 Bacteria 3389
297 Ga0501035_0087040 3300049822 Bacteria 2753
298 Ga0501035_0089941 3300049822 Bacteria 2703
299 Ga0501044_0002399 3300049823 Bacteria 21365
300 Ga0501044_0179788 3300049823 Bacteria 2083
301 Ga0501044_0328881 3300049823 Bacteria 1451
302 Ga0501045_0000169 3300049824 Bacteria 35650
303 Ga0501045_0000875 3300049824 Bacteria 19548
304 Ga0501045_0028021 3300049824 Bacteria 4062
305 Ga0501045_0169902 3300049824 Bacteria 1624
306 nmdc:mga05p37_131433_c1 3300050507 Bacteria 3072
307 nmdc:mga05p37_945800_c1 3300050507 Bacteria 923
308 nmdc:mga09592_212139_c1 3300050508 Bacteria 1678
309 nmdc:mga0qj67_294039_c1 3300050509 Bacteria 1316
310 nmdc:mga08y16_552459_c1 3300050511 Bacteria 1165
311 nmdc:mga08y16_664419_c1 3300050511 Bacteria 1045
312 Ga0500646_0135154 3300053090 Bacteria 805
313 Ga0500562_045888 3300053108 Bacteria 1165
314 Ga0501084_0000290 3300054114 Bacteria 38089
315 Ga0501084_0000667 3300054114 Bacteria 26186
316 Ga0501084_0046407 3300054114 Bacteria 3639
317 Ga0501084_0197936 3300054114 Bacteria 1695
318 Ga0501084_0409890 3300054114 Bacteria 1145
319 Ga0590075_000670 3300059424 Bacteria 9087
320 Ga0590077_011706 3300059426 Bacteria 1812
321 Ga0501082_0001092 3300060353 Bacteria 24030
322 Ga0501082_0001698 3300060353 Bacteria 19416
323 Ga0501082_0033931 3300060353 Bacteria 4402
324 Ga0501082_0092793 3300060353 Bacteria 2608
325 Ga0530510_0001754 3300061734 Bacteria 14780
326 Ga0530510_0002458 3300061734 Bacteria 12768
327 Ga0530510_0045068 3300061734 Bacteria 3187
328 Ga0530510_0054759 3300061734 Bacteria 2883
329 Ga0530510_0087550 3300061734 Bacteria 2269
330 Ga0530510_0511955 3300061734 Bacteria 910
331 2554257387 2554235005 Bacteria 6457341
332 2643943993 2643221587 Bacteria 7586415
333 2644434730 2643221677 Bacteria 7584031
334 2645721200 2643221961 Bacteria 3919167
335 2645724788 2643221962 Bacteria 3874254
336 2753269093 2751185782 Bacteria 11227053
337 2791914551 2791354901 Bacteria 8322202
338 2793980810 2791355406 Bacteria 11364898
339 2812355872 2811994879 Bacteria 9313447
340 2816425716 2816332119 Bacteria 8120218
341 2819742480 2818991472 Bacteria 10089953
342 2831937115 2831935698 Bacteria 5963223
343 2837269723 2837268691 Bacteria 7850704
344 2862186494 2862178590 Bacteria 8583590
345 2867306100 2867302475 Bacteria 7087181
346 2870723284 2870721527 Bacteria 9689237
347 2887482767 2887478801 Bacteria 8972725
348 2912762841 2912757875 Bacteria 7940295
349 2954005566 2954002825 Bacteria 9173742
350 8003317216 8003314358 Bacteria 10575343
351 8003319248 8003314358 Bacteria 10575343
352 8003861154 8003856774 Bacteria 7675274
353 8025536196 8025530807 Bacteria 8495698
354 8047718363 8047710418 Bacteria 11023148
355 8047720429 8047710418 Bacteria 11023148
356 8047894187 8047893842 Bacteria 11723082
357 8048365207 8048356638 Bacteria 11044339
358 8048371204 8048369669 Bacteria 11666822
359 8048380005 8048379754 Bacteria 11877923
360 8056058179 8056054917 Bacteria 5736694
361 JGI24735J21928_10004799
362 JGI24751J29686_10003588
363 JGI25406J46586_10023907
364 JGI25407J50210_10009700
365 JGI25407J50210_10027268
366 JGI25407J50210_10073631
367 Ga0070680_100366136
368 Ga0070667_100036528
369 Ga0070667_100676879
370 Ga0070709_10000545
371 Ga0070709_10006945
372 Ga0070714_100007804
373 Ga0070713_100000681
374 Ga0070713_100002145
375 Ga0070713_100234033
376 Ga0070710_10000294
377 Ga0070711_100003185
378 Ga0070711_100018872
379 Ga0070706_100027617
380 Ga0070698_100003445
381 Ga0068854_100355723
382 Ga0068852_100358350
383 Ga0068859_100542225
384 Ga0068860_100509224
385 Ga0081455_10011170
386 Ga0081455_10035220
387 Ga0081455_10065361
388 Ga0081538_10000512
389 Ga0081538_10000805
390 Ga0081538_10001385
391 Ga0081538_10002246
392 Ga0081538_10007916
393 Ga0081538_10015374
394 Ga0081538_10045652
395 Ga0081538_10060646
396 Ga0081539_10005827
397 Ga0081539_10104145
398 Ga0081539_10139314
399 Ga0070717_10007805
400 Ga0070717_10036795
401 Ga0070715_10012027
402 Ga0070712_100008252
403 Ga0070712_100049892
404 Ga0075428_100000326
405 Ga0075428_101019992
406 Ga0075430_100105069
407 Ga0075431_100147958
408 Ga0075431_100256083
409 Ga0075433_10892940
410 Ga0097620_100542271
411 Ga0111539_10265658
412 Ga0111539_10439050
413 Ga0114129_10033715
414 Ga0114129_10933256
415 Ga0157375_10232132
416 Ga0157377_10858755
417 Ga0209758_1001752
418 Ga0207426_1031527
419 Ga0207692_10000490
420 Ga0207685_10085175
421 Ga0207699_10000639
422 Ga0207699_10011378
423 Ga0207684_10023787
424 Ga0207693_10001538
425 Ga0207693_10056298
426 Ga0207663_10005857
427 Ga0207659_10361963
428 Ga0207700_10001861
429 Ga0207700_10008128
430 Ga0207664_10000374
431 Ga0207665_10002156
432 Ga0207640_10284970
433 Ga0207658_10633289
434 Ga0207703_10246479
435 Ga0268266_10082178
436 Ga0268266_10578422
437 Ga0268264_10165229
438 Ga0307515_10024229
439 Ga0307515_10156490
440 Ga0307515_10264993
441 Ga0314311_1034832
442 Ga0307513_10212663
443 Ga0307509_10074113
444 Ga0307408_100203415
445 Ga0307514_10030943
446 Ga0307514_10378205
447 Ga0307405_10056436
448 Ga0307405_10098791
449 Ga0307405_10160888
450 Ga0307413_10143349
451 Ga0307413_10216301
452 Ga0307518_10052019
453 Ga0307410_10003730
454 Ga0307410_10418510
455 Ga0307410_10497815
456 Ga0307406_10026800
457 Ga0307406_10086205
458 Ga0307406_10301983
459 Ga0307406_10916597
460 Ga0307412_10197023
461 Ga0307409_100104998
462 Ga0307409_100107641
463 Ga0307409_101048218
464 Ga0307409_101301602
465 Ga0307416_100001008
466 Ga0307416_100011398
467 Ga0307416_100202823
468 Ga0307416_100465280
469 Ga0307416_100849926
470 Ga0307416_100924188
471 Ga0307415_100000540
472 Ga0307415_100021798
473 Ga0307415_100034486
474 Ga0307415_100125130
475 Ga0307415_100210309
476 Ga0307415_100247489
477 Ga0307415_100287533
478 Ga0307415_100487198
479 Ga0307507_10037180
480 Ga0373948_0024749
481 Ga0373940_0012747
482 Ga0373941_0013942
483 Ga0373942_0002469
484 Ga0373935_0102728
485 Ga0395899_0128619
486 Ga0395900_0072977
487 Ga0395900_0125203
488 Ga0395900_0235972
489 Ga0395898_0016012
490 Ga0395898_0033612
491 Ga0395905_0024255
492 Ga0436364_0272204
493 Ga0395901_0252016
494 Ga0395901_0269525
495 Ga0395901_0852501
496 Ga0436365_1223028
497 Ga0439438_057498
498 Ga0451837_1280867
499 Ga0451839_1627744
500 Ga0451843_1370068
501 Ga0451855_1550856
502 Ga0451853_0238892
503 Ga0451853_3502965
504 Ga0439433_0095475
505 Ga0439443_022717
506 Ga0439445_0157017
507 Ga0439448_0102513
508 Ga0439448_0148079
509 Ga0439449_0071162
510 Ga0439449_0125689
511 Ga0439450_002567
512 Ga0439454_014331
513 Ga0439456_012131
514 Ga0439463_010537
515 Ga0450912_005068
516 Ga0450913_000684
517 Ga0450915_000068
518 Ga0450917_004226
519 Ga0450902_009901
520 Ga0450905_012496
521 Ga0439435_0030102
522 Ga0439444_0001705
523 Ga0439464_0005635
524 Ga0439464_0040243
525 Ga0439460_0006419
526 Ga0450916_007234
527 Ga0439440_0100216
528 Ga0466972_0007901
529 Ga0466966_0016331
530 Ga0466961_0017838
531 Ga0453684_0001942
532 Ga0453684_0006722
533 Ga0453684_0018110
534 Ga0453684_0025168
535 Ga0453684_0029570
536 Ga0466971_0047095
537 Ga0466968_0012792
538 Ga0466967_0128342
539 Ga0495592_0043380
540 Ga0495603_0040115
541 Ga0495629_0196402
542 Ga0495618_0049698
543 Ga0495676_0327764
544 Ga0495680_0046127
545 Ga0495602_0532938
546 Ga0496100_0008943
547 Ga0496101_0006561
548 Ga0496102_0007860
549 Ga0496104_0004343
550 Ga0496106_0074126
551 Ga0496108_0000414
552 Ga0496108_0023653
553 Ga0496109_0004091
554 Ga0496110_0018222
555 Ga0496114_0000440
556 Ga0496117_0053920
557 Ga0501031_0002238
558 Ga0501031_0064798
559 Ga0501031_0141951
560 Ga0501031_0169190
561 Ga0501031_0401503
562 Ga0501032_0027146
563 Ga0501032_0065486
564 Ga0501032_0509874
565 Ga0501033_0193451
566 Ga0501034_0445285
567 Ga0501036_0000588
568 Ga0501036_0004091
569 Ga0501036_0102647
570 Ga0501036_0344272
571 Ga0501037_0054836
572 Ga0501037_0141354
573 Ga0501037_0143058
574 Ga0501038_0006976
575 Ga0501038_0012502
576 Ga0501038_0012561
577 Ga0501039_0000632
578 Ga0501039_0035056
579 Ga0501039_0087672
580 Ga0501040_0000179
581 Ga0501040_0001242
582 Ga0501040_0069017
583 Ga0501040_0189153
584 Ga0501040_0332672
585 Ga0501040_0355093
586 Ga0501041_0006636
587 Ga0501041_0063715
588 Ga0501041_0074532
589 Ga0501041_0455459
590 Ga0501042_0000030
591 Ga0501042_0002377
592 Ga0501042_0042808
593 Ga0501042_0043875
594 Ga0501042_0062321
595 Ga0501043_0017326
596 Ga0501043_0051836
597 Ga0501043_0190871
598 Ga0501046_0000637
599 Ga0501046_0011010
600 Ga0501046_0028240
601 Ga0501046_0062136
602 Ga0501047_0034543
603 Ga0501047_0424484
604 Ga0501048_0000469
605 Ga0501048_0000527
606 Ga0501048_0355366
607 Ga0501048_0411778
608 Ga0501048_0446312
609 Ga0501068_0082434
610 Ga0501068_0115485
611 Ga0501069_0033737
612 Ga0501070_0221853
613 Ga0501070_0373103
614 Ga0501070_0923406
615 Ga0501071_0001894
616 Ga0501071_0004320
617 Ga0501071_0035491
618 Ga0501071_0037442
619 Ga0501072_0000401
620 Ga0501072_0005541
621 Ga0501072_0052137
622 Ga0501072_0089126
623 Ga0501072_0145742
624 Ga0501074_0001602
625 Ga0501074_0114748
626 Ga0501075_0002151
627 Ga0501075_0003136
628 Ga0501075_0011030
629 Ga0501075_0025914
630 Ga0501075_0043611
631 Ga0501075_0183109
632 Ga0501076_0001682
633 Ga0501076_0002464
634 Ga0501076_0037085
635 Ga0501076_0055679
636 Ga0501076_0191856
637 Ga0501077_0001349
638 Ga0501077_0004975
639 Ga0501077_0052191
640 Ga0501079_0000605
641 Ga0501079_0002882
642 Ga0501079_0035534
643 Ga0501079_0081000
644 Ga0501079_0117786
645 Ga0501080_0074739
646 Ga0501080_0121337
647 Ga0501080_0292145
648 Ga0501080_0470282
649 Ga0501080_0610266
650 Ga0501081_0031789
651 Ga0501081_0092756
652 Ga0501081_0115319
653 Ga0501081_0129373
654 Ga0501083_0032288
655 Ga0501083_0352660
656 Ga0501035_0059952
657 Ga0501035_0087040
658 Ga0501035_0089941
659 Ga0501044_0002399
660 Ga0501044_0179788
661 Ga0501044_0328881
662 Ga0501045_0000169
663 Ga0501045_0000875
664 Ga0501045_0028021
665 Ga0501045_0169902
666 nmdc:mga05p37_131433_c1
667 nmdc:mga05p37_945800_c1
668 nmdc:mga09592_212139_c1
669 nmdc:mga0qj67_294039_c1
670 nmdc:mga08y16_552459_c1
671 nmdc:mga08y16_664419_c1
672 Ga0500646_0135154
673 Ga0500562_045888
674 Ga0501084_0000290
675 Ga0501084_0000667
676 Ga0501084_0046407
677 Ga0501084_0197936
678 Ga0501084_0409890
679 Ga0590075_000670
680 Ga0590077_011706
681 Ga0501082_0001092
682 Ga0501082_0001698
683 Ga0501082_0033931
684 Ga0501082_0092793
685 Ga0530510_0001754
686 Ga0530510_0002458
687 Ga0530510_0045068
688 Ga0530510_0054759
689 Ga0530510_0087550
690 Ga0530510_0511955
691 2554257387
692 2643943993
693 2644434730
694 2645721200
695 2645724788
696 2753269093
697 2791914551
698 2793980810
699 2812355872
700 2816425716
701 2819742480
702 2831937115
703 2837269723
704 2862186494
705 2867306100
706 2870723284
707 2887482767
708 2912762841
709 2954005566
710 8003317216
711 8003319248
712 8003861154
713 8025536196
714 8047718363
715 8047720429
716 8047894187
717 8048365207
718 8048371204
719 8048380005
720 8056058179

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

45

157

0.98

PF00196

GerE

Bacterial regulatory proteins, luxR family

187

243

0.97

PF08281

Sigma70_r4_2

Sigma-70, region 4

187

231

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1fse-assembly2.cif.gz_C crystal structure of the bacillus subtilis regulatory protein gere 0.9936 148 206
1fse-assembly1.cif.gz_A crystal structure of the bacillus subtilis regulatory protein gere 0.984 147 208
3ulq-assembly1.cif.gz_B crystal structure of the anti-activator rapf complexed with the response regulator coma dna binding domain 0.9817 147 203
7x1k-assembly1.cif.gz_B crystal structure of the flagellar expression regulator degu from listeria monocytogenes 0.981 148 207
7ve6-assembly1.cif.gz_B n-terminal domain of vrar 0.9764 1 136
ID Description Score Start End Superfamily
3cloC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9998 148 203 1.10.10.10
3cloA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9944 148 203 1.10.10.10
1fseC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9936 148 206 1.10.10.10
3ulqB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9817 147 203 1.10.10.10
4hyeA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9758 147 208 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A6L4AE68-F1-model_v4 Response regulator transcription factor 0.9854 2 127 GO:0000160
GO:0003677
AF-A0A847WSA3-F1-model_v4 Response regulator transcription factor 0.9776 1 139 GO:0000160
GO:0003677
GO:0010468
AF-A0A1I1F8Z0-F1-model_v4 Two-component system, NarL family, response regulator LiaR 0.9769 2 139 GO:0000160
GO:0003677
GO:0005737
GO:0010468
AF-A0A399TBJ3-F1-model_v4 deleted 0.9768 2 140
AF-A0A7W9GUV8-F1-model_v4 DNA-binding NarL/FixJ family response regulator 0.9768 2 135 GO:0000160
GO:0003677

Map