F421809

General Info

Members Datasets Scaffolds Average Seq Length
360 157 720 304

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100312714|Ga0070699_1003127142
Length 362
Sequence MGAGFLPLPATRGFLRLGLVFRFRRGGSLRFMPPMSRGALDASNTSLLSNRCSYDIDMELRHLRYFVAVGEEQHYGRAAARLRVAQPALSRQIQDLEREIGFQLFDRLPRGVRLNAAGRALLEDARLILQQVNEATIRAGRVARGLAGTLRVGFTESASWHGVVPASFLQFRQGQPDAELQLSPLSSLDQVQAVRSGQLDAGYVFNMPRNDAELDQVQVASQKLVLAVPKQHPLTKSRSLRLRDLTDAAFVWFPRRQSPAYYDRLMQACSRGGLKAPRIVQEAMDQATLLSLVACGLGVAFVSDATRWRCPKDVALRPVVDMHLPIAFSLVWRKDNASPLLARFVAEVRQRPDVRALARSAE

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
51 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
67 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
109 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
110 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
111 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
112 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
113 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
114 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
115 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
116 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
117 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
118 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
119 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
120 3300042117 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0415F_E14_082316_1937 Metagenome Rhizosphere
121 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
122 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
123 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
124 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
125 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
126 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
127 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
128 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
129 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
130 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
131 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
132 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
133 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
137 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
142 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.28
Nodule 0
Rhizoplane 0.83
Rhizosphere 98.61
Stem 0
Stem Tuber 0
Unclassified 16.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100312714 3300005518 Bacteria 1410
2 Ga0065715_10276562 3300005293 Unclassified 1097
3 Ga0070676_10072926 3300005328 Bacteria 2065
4 Ga0070670_100412616 3300005331 Unclassified 1193
5 Ga0068869_100454423 3300005334 Bacteria 1062
6 Ga0070666_10065076 3300005335 Unclassified 2473
7 Ga0070689_100004786 3300005340 Bacteria 9181
8 Ga0070689_100264095 3300005340 Bacteria 1423
9 Ga0070668_100114332 3300005347 Bacteria 2150
10 Ga0070669_100311706 3300005353 Bacteria 1269
11 Ga0070675_100528509 3300005354 Unclassified 1065
12 Ga0070688_100048943 3300005365 Bacteria 2629
13 Ga0070688_100328682 3300005365 Unclassified 1113
14 Ga0070667_100461362 3300005367 Unclassified 1162
15 Ga0070709_10306291 3300005434 Bacteria 1162
16 Ga0070713_100104726 3300005436 Bacteria 2456
17 Ga0070713_100513606 3300005436 Unclassified 1131
18 Ga0070710_10120848 3300005437 Bacteria 1586
19 Ga0070710_10124813 3300005437 Bacteria 1563
20 Ga0070711_100016720 3300005439 Bacteria 4661
21 Ga0070711_100019879 3300005439 Bacteria 4318
22 Ga0070711_100031503 3300005439 Bacteria 3521
23 Ga0070711_100168158 3300005439 Bacteria 1669
24 Ga0070711_100250609 3300005439 Bacteria 1389
25 Ga0070711_100416674 3300005439 Bacteria 1094
26 Ga0070705_100084133 3300005440 Unclassified 1962
27 Ga0070705_100115166 3300005440 Bacteria 1726
28 Ga0070705_100180808 3300005440 Unclassified 1428
29 Ga0070705_100216360 3300005440 Bacteria 1324
30 Ga0070694_100016750 3300005444 Bacteria 4617
31 Ga0070694_100027545 3300005444 Bacteria 3691
32 Ga0070694_100110958 3300005444 Bacteria 1954
33 Ga0070694_100112552 3300005444 Bacteria 1941
34 Ga0070694_100296869 3300005444 Unclassified 1237
35 Ga0070708_100044085 3300005445 Bacteria 3921
36 Ga0070708_100066196 3300005445 Bacteria 3243
37 Ga0070708_100078046 3300005445 Bacteria 2993
38 Ga0070708_100079770 3300005445 Bacteria 2961
39 Ga0070708_100145120 3300005445 Bacteria 2204
40 Ga0070708_100233592 3300005445 Bacteria 1726
41 Ga0070708_100274015 3300005445 Bacteria 1587
42 Ga0070708_100307663 3300005445 Bacteria 1492
43 Ga0070708_100424079 3300005445 Bacteria 1255
44 Ga0070706_100022213 3300005467 Bacteria 5842
45 Ga0070706_100035235 3300005467 Bacteria 4622
46 Ga0070706_100064855 3300005467 Bacteria 3377
47 Ga0070706_100065333 3300005467 Bacteria 3364
48 Ga0070706_100108878 3300005467 Bacteria 2578
49 Ga0070706_100249109 3300005467 Bacteria 1658
50 Ga0070706_100323670 3300005467 Bacteria 1437
51 Ga0070707_100002916 3300005468 Bacteria 16239
52 Ga0070707_100046465 3300005468 Bacteria 4155
53 Ga0070707_100049096 3300005468 Bacteria 4044
54 Ga0070707_100053624 3300005468 Bacteria 3866
55 Ga0070707_100053625 3300005468 Bacteria 3866
56 Ga0070707_100110888 3300005468 Bacteria 2661
57 Ga0070707_100162592 3300005468 Unclassified 2175
58 Ga0070707_100366060 3300005468 Bacteria 1400
59 Ga0070698_100003450 3300005471 Bacteria 17393
60 Ga0070698_100028215 3300005471 Bacteria 5832
61 Ga0070698_100065878 3300005471 Bacteria 3647
62 Ga0070698_100085315 3300005471 Bacteria 3145
63 Ga0070698_100103417 3300005471 Bacteria 2818
64 Ga0070698_100302695 3300005471 Unclassified 1529
65 Ga0070698_100382340 3300005471 Unclassified 1340
66 Ga0070699_100016507 3300005518 Bacteria 6339
67 Ga0070699_100041903 3300005518 Bacteria 3961
68 Ga0070699_100062906 3300005518 Bacteria 3217
69 Ga0070699_100263245 3300005518 Bacteria 1542
70 Ga0070699_100274491 3300005518 Unclassified 1509
71 Ga0070699_100280022 3300005518 Bacteria 1494
72 Ga0070699_100283060 3300005518 Bacteria 1485
73 Ga0070699_100375110 3300005518 Bacteria 1284
74 Ga0070699_100390146 3300005518 Unclassified 1258
75 Ga0070697_100015901 3300005536 Bacteria 5912
76 Ga0070697_100024404 3300005536 Bacteria 4812
77 Ga0070697_100047905 3300005536 Bacteria 3465
78 Ga0070697_100049606 3300005536 Bacteria 3407
79 Ga0070697_100124748 3300005536 Bacteria 2157
80 Ga0070697_100192728 3300005536 Bacteria 1730
81 Ga0070697_100315982 3300005536 Unclassified 1344
82 Ga0070697_100453246 3300005536 Bacteria 1117
83 Ga0070686_100310651 3300005544 Unclassified 1172
84 Ga0070695_100018603 3300005545 Bacteria 4220
85 Ga0070695_100042421 3300005545 Bacteria 2888
86 Ga0070695_100068428 3300005545 Bacteria 2318
87 Ga0070696_100028892 3300005546 Bacteria 3785
88 Ga0070696_100106736 3300005546 Bacteria 2013
89 Ga0070696_100130995 3300005546 Bacteria 1825
90 Ga0070696_100153173 3300005546 Bacteria 1694
91 Ga0070665_100482487 3300005548 Unclassified 1250
92 Ga0070704_100115364 3300005549 Bacteria 2052
93 Ga0070704_100126854 3300005549 Bacteria 1970
94 Ga0068857_100373535 3300005577 Bacteria 1323
95 Ga0070702_100087865 3300005615 Bacteria 1878
96 Ga0068866_10155575 3300005718 Bacteria 1328
97 Ga0068863_100299122 3300005841 Bacteria 1561
98 Ga0068858_100365170 3300005842 Unclassified 1384
99 Ga0068862_100161559 3300005844 Bacteria 2000
100 Ga0081538_10092277 3300005981 Unclassified 1560
101 Ga0081540_1047645 3300005983 Bacteria 2153
102 Ga0070717_10097934 3300006028 Unclassified 2485
103 Ga0070715_10092634 3300006163 Bacteria 1394
104 Ga0070716_100034308 3300006173 Bacteria 2781
105 Ga0070716_100066515 3300006173 Unclassified 2102
106 Ga0070716_100071755 3300006173 Bacteria 2037
107 Ga0070716_100129759 3300006173 Bacteria 1592
108 Ga0070716_100218163 3300006173 Bacteria 1280
109 Ga0070712_100015638 3300006175 Bacteria 4892
110 Ga0070712_100052166 3300006175 Bacteria 2851
111 Ga0070712_100062498 3300006175 Bacteria 2633
112 Ga0070712_100218424 3300006175 Bacteria 1507
113 Ga0070712_100299165 3300006175 Unclassified 1302
114 Ga0070712_100379269 3300006175 Bacteria 1164
115 Ga0075367_10071433 3300006178 Bacteria 2088
116 Ga0097621_100208077 3300006237 Bacteria 1701
117 Ga0075428_100158367 3300006844 Bacteria 2458
118 Ga0075428_100219960 3300006844 Bacteria 2051
119 Ga0075428_100641583 3300006844 Bacteria 1133
120 Ga0075431_100024725 3300006847 Bacteria 6158
121 Ga0075431_100034121 3300006847 Bacteria 5243
122 Ga0075431_100355314 3300006847 Unclassified 1472
123 Ga0075433_10003568 3300006852 Bacteria 12009
124 Ga0075433_10070038 3300006852 Bacteria 3081
125 Ga0075433_10088106 3300006852 Unclassified 2742
126 Ga0075433_10106194 3300006852 Bacteria 2489
127 Ga0075433_10128307 3300006852 Unclassified 2253
128 Ga0075433_10130095 3300006852 Bacteria 2236
129 Ga0075433_10201923 3300006852 Unclassified 1767
130 Ga0075433_10277990 3300006852 Bacteria 1483
131 Ga0075434_100001043 3300006871 Bacteria 22614
132 Ga0075434_100126944 3300006871 Bacteria 2567
133 Ga0075434_100177733 3300006871 Bacteria 2148
134 Ga0075434_100194691 3300006871 Archaea 2047
135 Ga0075434_100206891 3300006871 Bacteria 1983
136 Ga0075434_100262661 3300006871 Unclassified 1746
137 Ga0075434_100375196 3300006871 Bacteria 1443
138 Ga0075434_100459488 3300006871 Unclassified 1294
139 Ga0075429_100073342 3300006880 Bacteria 2982
140 Ga0075436_100002029 3300006914 Bacteria 13966
141 Ga0075436_100013574 3300006914 Bacteria 5579
142 Ga0075436_100267118 3300006914 Bacteria 1221
143 Ga0075435_100007289 3300007076 Bacteria 7874
144 Ga0075435_100070511 3300007076 Bacteria 2853
145 Ga0075435_100095957 3300007076 Bacteria 2453
146 Ga0075435_100158036 3300007076 Bacteria 1908
147 Ga0075435_100261175 3300007076 Bacteria 1476
148 Ga0075435_100521799 3300007076 Bacteria 1028
149 Ga0099794_10018629 3300007265 Bacteria 3116
150 Ga0099794_10130383 3300007265 Bacteria 1269
151 Ga0099794_10147841 3300007265 Bacteria 1192
152 Ga0099795_10010513 3300007788 Bacteria 2728
153 Ga0111539_10356094 3300009094 Bacteria 1703
154 Ga0105245_10082356 3300009098 Bacteria 2944
155 Ga0114129_10019485 3300009147 Bacteria 9662
156 Ga0114129_10040798 3300009147 Bacteria 6543
157 Ga0114129_10041630 3300009147 Bacteria 6471
158 Ga0114129_10074059 3300009147 Bacteria 4743
159 Ga0114129_10095737 3300009147 Bacteria 4111
160 Ga0114129_10103994 3300009147 Unclassified 3925
161 Ga0114129_10106440 3300009147 Bacteria 3874
162 Ga0114129_10133224 3300009147 Bacteria 3412
163 Ga0114129_10155207 3300009147 Bacteria 3131
164 Ga0114129_10210222 3300009147 Bacteria 2631
165 Ga0114129_10318001 3300009147 Bacteria 2070
166 Ga0114129_10728743 3300009147 Bacteria 1271
167 Ga0105241_10432607 3300009174 Unclassified 1160
168 Ga0105242_10022988 3300009176 Bacteria 4911
169 Ga0105242_10166694 3300009176 Bacteria 1933
170 Ga0105248_10513546 3300009177 Bacteria 1351
171 Ga0105249_10159931 3300009553 Bacteria 2176
172 Ga0099796_10007002 3300010159 Bacteria 2922
173 Ga0157378_10003772 3300013297 Bacteria 13429
174 Ga0157378_10122916 3300013297 Bacteria 2395
175 Ga0157378_10372552 3300013297 Bacteria 1400
176 Ga0163162_10004709 3300013306 Bacteria 13152
177 Ga0163162_10020658 3300013306 Bacteria 6472
178 Ga0163162_10070906 3300013306 Bacteria 3537
179 Ga0163162_10359356 3300013306 Bacteria 1589
180 Ga0163162_10702722 3300013306 Unclassified 1133
181 Ga0157375_10283950 3300013308 Unclassified 1818
182 Ga0157380_10176543 3300014326 Bacteria 1872
183 Ga0157379_10204488 3300014968 Bacteria 1786
184 Ga0157376_10083573 3300014969 Unclassified 2747
185 Ga0157376_10436875 3300014969 Unclassified 1273
186 Ga0228598_1002021 3300024227 Bacteria 4430
187 Ga0228598_1007381 3300024227 Bacteria 2241
188 Ga0207653_10010462 3300025885 Bacteria 2894
189 Ga0207653_10013155 3300025885 Bacteria 2590
190 Ga0207692_10168929 3300025898 Bacteria 1266
191 Ga0207688_10155758 3300025901 Bacteria 1352
192 Ga0207685_10014921 3300025905 Bacteria 2446
193 Ga0207685_10034878 3300025905 Bacteria 1831
194 Ga0207685_10076402 3300025905 Bacteria 1373
195 Ga0207685_10100088 3300025905 Bacteria 1238
196 Ga0207684_10012650 3300025910 Bacteria 7329
197 Ga0207684_10018550 3300025910 Bacteria 5956
198 Ga0207684_10025238 3300025910 Bacteria 5066
199 Ga0207684_10047541 3300025910 Bacteria 3638
200 Ga0207684_10052973 3300025910 Bacteria 3445
201 Ga0207684_10152939 3300025910 Bacteria 1985
202 Ga0207693_10001036 3300025915 Bacteria 24880
203 Ga0207693_10014674 3300025915 Bacteria 6294
204 Ga0207693_10096600 3300025915 Bacteria 2316
205 Ga0207693_10103029 3300025915 Bacteria 2238
206 Ga0207693_10161025 3300025915 Bacteria 1765
207 Ga0207693_10187029 3300025915 Unclassified 1630
208 Ga0207693_10190670 3300025915 Bacteria 1613
209 Ga0207693_10273768 3300025915 Bacteria 1323
210 Ga0207663_10011249 3300025916 Bacteria 4799
211 Ga0207663_10093656 3300025916 Bacteria 2000
212 Ga0207663_10167668 3300025916 Unclassified 1557
213 Ga0207663_10249729 3300025916 Bacteria 1305
214 Ga0207663_10284032 3300025916 Bacteria 1230
215 Ga0207646_10007087 3300025922 Bacteria 11467
216 Ga0207646_10008581 3300025922 Bacteria 10213
217 Ga0207646_10016491 3300025922 Bacteria 6932
218 Ga0207646_10029407 3300025922 Bacteria 4994
219 Ga0207646_10098703 3300025922 Bacteria 2617
220 Ga0207646_10125698 3300025922 Bacteria 2306
221 Ga0207646_10175708 3300025922 Bacteria 1934
222 Ga0207646_10353769 3300025922 Bacteria 1327
223 Ga0207681_10243588 3300025923 Bacteria 1401
224 Ga0207659_10126241 3300025926 Bacteria 1968
225 Ga0207700_10104055 3300025928 Bacteria 2271
226 Ga0207700_10195453 3300025928 Bacteria 1702
227 Ga0207664_10560798 3300025929 Bacteria 1025
228 Ga0207686_10159059 3300025934 Bacteria 1581
229 Ga0207670_10054144 3300025936 Unclassified 2706
230 Ga0207704_10301972 3300025938 Unclassified 1227
231 Ga0207665_10002951 3300025939 Bacteria 11401
232 Ga0207665_10023205 3300025939 Bacteria 4087
233 Ga0207665_10033940 3300025939 Bacteria 3385
234 Ga0207665_10072278 3300025939 Bacteria 2356
235 Ga0207665_10084783 3300025939 Bacteria 2187
236 Ga0207665_10211744 3300025939 Bacteria 1416
237 Ga0207665_10290244 3300025939 Bacteria 1220
238 Ga0207689_10202700 3300025942 Bacteria 1638
239 Ga0207689_10242492 3300025942 Bacteria 1490
240 Ga0207689_10303638 3300025942 Bacteria 1323
241 Ga0207668_10328460 3300025972 Bacteria 1272
242 Ga0207677_10438242 3300026023 Bacteria 1117
243 Ga0207703_10080933 3300026035 Unclassified 2706
244 Ga0207703_10120270 3300026035 Bacteria 2254
245 Ga0207708_10254054 3300026075 Bacteria 1417
246 Ga0207708_10397327 3300026075 Bacteria 1139
247 Ga0207641_10386209 3300026088 Bacteria 1342
248 Ga0207648_10057247 3300026089 Bacteria 3401
249 Ga0207675_100078253 3300026118 Bacteria 3098
250 Ga0209967_1013816 3300027364 Bacteria 1147
251 Ga0209981_1007505 3300027378 Unclassified 1472
252 Ga0209999_1011661 3300027543 Bacteria 1591
253 Ga0209982_1013190 3300027552 Unclassified 1244
254 Ga0209983_1025896 3300027665 Bacteria 1239
255 Ga0209588_1017102 3300027671 Bacteria 2245
256 Ga0209966_1009384 3300027695 Bacteria 1747
257 Ga0209974_10067940 3300027876 Bacteria 1213
258 Ga0268265_10236638 3300028380 Bacteria 1609
259 Ga0307508_10000029 3300031616 Bacteria 168411
260 Ga0307413_10278904 3300031824 Bacteria 1256
261 Ga0307414_10102199 3300032004 Bacteria 2160
262 Ga0373961_0051052 3300035241 Bacteria 1227
263 Ga0373935_0031861 3300035692 Unclassified 3274
264 Ga0373935_0293222 3300035692 Bacteria 1148
265 Ga0373935_0433528 3300035692 Unclassified 947
266 Ga0373927_0038389 3300035695 Unclassified 3109
267 Ga0373947_0002413 3300035725 Bacteria 11277
268 Ga0373947_0324976 3300035725 Bacteria 1029
269 Ga0373925_0000166 3300037068 Bacteria 71445
270 Ga0439439_0011983 3300041406 Bacteria 2092
271 Ga0439453_0002987 3300041408 Bacteria 2392
272 Ga0439461_0006061 3300041410 Unclassified 2092
273 Ga0439431_0002734 3300041997 Bacteria 3875
274 Ga0439437_001924 3300042000 Bacteria 2208
275 Ga0439441_018683 3300042001 Unclassified 1255
276 Ga0439445_0017963 3300042004 Bacteria 1752
277 Ga0439448_0022404 3300042005 Bacteria 1963
278 Ga0439450_001310 3300042008 Unclassified 3610
279 Ga0439454_000279 3300042011 Bacteria 3742
280 Ga0439457_026956 3300042014 Bacteria 1272
281 Ga0439463_037680 3300042016 Unclassified 1226
282 Ga0450913_000307 3300042117 Bacteria 1876
283 Ga0450917_001049 3300042120 Bacteria 2034
284 Ga0450888_008414 3300042126 Unclassified 1161
285 Ga0450894_001120 3300042131 Bacteria 4031
286 Ga0450900_008511 3300042136 Bacteria 1283
287 Ga0439458_0017992 3300042157 Bacteria 1616
288 Ga0439444_0000329 3300042437 Bacteria 4972
289 Ga0439459_0024238 3300042438 Unclassified 1188
290 Ga0439464_0001612 3300042439 Bacteria 5368
291 Ga0439460_0010961 3300042461 Bacteria 2331
292 Ga0450916_000564 3300042530 Bacteria 3292
293 Ga0450918_004501 3300042531 Bacteria 2537
294 Ga0450893_0001440 3300042532 Bacteria 3643
295 Ga0495592_0191168 3300046454 Bacteria 1387
296 Ga0495580_0000210 3300046472 Bacteria 45189
297 Ga0495580_0096003 3300046472 Bacteria 2062
298 Ga0495664_0011538 3300046477 Bacteria 4984
299 Ga0495642_0099005 3300046528 Bacteria 1240
300 Ga0495586_0100950 3300046535 Bacteria 1601
301 Ga0495586_0212682 3300046535 Bacteria 1097
302 Ga0495587_0159757 3300046536 Unclassified 1283
303 Ga0495645_0058412 3300046543 Bacteria 2798
304 Ga0495667_0041497 3300046559 Bacteria 3052
305 Ga0495659_0012012 3300046664 Bacteria 2797
306 Ga0495599_0004692 3300046678 Bacteria 8109
307 Ga0495658_0188482 3300046683 Bacteria 1281
308 Ga0495636_0068110 3300047318 Bacteria 1515
309 Ga0495684_0050387 3300047471 Bacteria 3180
310 Ga0495602_0197431 3300048088 Bacteria 1538
311 Ga0496104_0338878 3300048907 Unclassified 1417
312 Ga0496104_0630933 3300048907 Unclassified 981
313 Ga0496106_0066228 3300048909 Bacteria 2751
314 nmdc:mga05p37_135677_c1 3300050507 Bacteria 3018
315 nmdc:mga05p37_188075_c1 3300050507 Bacteria 2509
316 nmdc:mga05p37_33076_c1 3300050507 Bacteria 6333
317 nmdc:mga05p37_42994_c1 3300050507 Bacteria 5555
318 nmdc:mga05p37_594999_c1 3300050507 Bacteria 1250
319 nmdc:mga05p37_623421_c1 3300050507 Bacteria 1213
320 nmdc:mga05p37_638613_c1 3300050507 Bacteria 1195
321 nmdc:mga05p37_90403_c1 3300050507 Unclassified 3773
322 nmdc:mga05p37_932_c1 3300050507 Bacteria 32971
323 nmdc:mga05p37_94632_c1 3300050507 Bacteria 3681
324 nmdc:mga09592_137231_c1 3300050508 Bacteria 2107
325 nmdc:mga09592_55395_c1 3300050508 Bacteria 3351
326 nmdc:mga06r32_26707_c1 3300050510 Bacteria 5387
327 nmdc:mga08y16_278823_c1 3300050511 Bacteria 1724
328 nmdc:mga08y16_301777_c1 3300050511 Unclassified 1651
329 nmdc:mga08y16_526520_c1 3300050511 Bacteria 1198
330 nmdc:mga0n895_108300_c1 3300050512 Bacteria 2793
331 nmdc:mga0n895_210664_c1 3300050512 Bacteria 1974
332 nmdc:mga0n895_2931_c1 3300050512 Bacteria 13536
333 nmdc:mga0n895_31916_c1 3300050512 Bacteria 5049
334 nmdc:mga0n895_332208_c1 3300050512 Unclassified 1540
335 nmdc:mga0n895_612184_c1 3300050512 Unclassified 1091
336 nmdc:mga0n895_86183_c1 3300050512 Bacteria 3137
337 nmdc:mga0rr50_100604_c1 3300050513 Bacteria 2271
338 nmdc:mga0rr50_10769_c1 3300050513 Bacteria 5827
339 nmdc:mga0rr50_143529_c1 3300050513 Bacteria 1923
340 nmdc:mga0rr50_171316_c1 3300050513 Bacteria 1769
341 nmdc:mga0rr50_198587_c1 3300050513 Bacteria 1647
342 nmdc:mga0rr50_290040_c1 3300050513 Bacteria 1367
343 nmdc:mga0rr50_686_c1 3300050513 Bacteria 18072
344 nmdc:mga0rr50_69905_c1 3300050513 Bacteria 2674
345 nmdc:mga08x19_129959_c1 3300050514 Bacteria 1693
346 nmdc:mga08x19_18688_c1 3300050514 Bacteria 4248
347 nmdc:mga08x19_191094_c1 3300050514 Bacteria 1401
348 nmdc:mga08x19_1991_c1 3300050514 Bacteria 12508
349 nmdc:mga08x19_6737_c1 3300050514 Bacteria 6820
350 nmdc:mga08x19_87281_c1 3300050514 Bacteria 2055
351 nmdc:mga08x19_95759_c1 3300050514 Bacteria 1964
352 nmdc:mga0a205_185799_c1 3300050515 Bacteria 1971
353 nmdc:mga0a205_198937_c1 3300050515 Bacteria 1895
354 nmdc:mga0a205_219619_c1 3300050515 Bacteria 1787
355 nmdc:mga0a205_221273_c1 3300050515 Bacteria 1778
356 nmdc:mga0a205_23712_c1 3300050515 Bacteria 5821
357 nmdc:mga0a205_327986_c1 3300050515 Bacteria 1401
358 nmdc:mga0a205_49618_c1 3300050515 Bacteria 4052
359 nmdc:mga0a205_83189_c1 3300050515 Bacteria 3091
360 Ga0495612_0220371 3300053078 Bacteria 840
361 Ga0070699_100312714
362 Ga0065715_10276562
363 Ga0070676_10072926
364 Ga0070670_100412616
365 Ga0068869_100454423
366 Ga0070666_10065076
367 Ga0070689_100004786
368 Ga0070689_100264095
369 Ga0070668_100114332
370 Ga0070669_100311706
371 Ga0070675_100528509
372 Ga0070688_100048943
373 Ga0070688_100328682
374 Ga0070667_100461362
375 Ga0070709_10306291
376 Ga0070713_100104726
377 Ga0070713_100513606
378 Ga0070710_10120848
379 Ga0070710_10124813
380 Ga0070711_100016720
381 Ga0070711_100019879
382 Ga0070711_100031503
383 Ga0070711_100168158
384 Ga0070711_100250609
385 Ga0070711_100416674
386 Ga0070705_100084133
387 Ga0070705_100115166
388 Ga0070705_100180808
389 Ga0070705_100216360
390 Ga0070694_100016750
391 Ga0070694_100027545
392 Ga0070694_100110958
393 Ga0070694_100112552
394 Ga0070694_100296869
395 Ga0070708_100044085
396 Ga0070708_100066196
397 Ga0070708_100078046
398 Ga0070708_100079770
399 Ga0070708_100145120
400 Ga0070708_100233592
401 Ga0070708_100274015
402 Ga0070708_100307663
403 Ga0070708_100424079
404 Ga0070706_100022213
405 Ga0070706_100035235
406 Ga0070706_100064855
407 Ga0070706_100065333
408 Ga0070706_100108878
409 Ga0070706_100249109
410 Ga0070706_100323670
411 Ga0070707_100002916
412 Ga0070707_100046465
413 Ga0070707_100049096
414 Ga0070707_100053624
415 Ga0070707_100053625
416 Ga0070707_100110888
417 Ga0070707_100162592
418 Ga0070707_100366060
419 Ga0070698_100003450
420 Ga0070698_100028215
421 Ga0070698_100065878
422 Ga0070698_100085315
423 Ga0070698_100103417
424 Ga0070698_100302695
425 Ga0070698_100382340
426 Ga0070699_100016507
427 Ga0070699_100041903
428 Ga0070699_100062906
429 Ga0070699_100263245
430 Ga0070699_100274491
431 Ga0070699_100280022
432 Ga0070699_100283060
433 Ga0070699_100375110
434 Ga0070699_100390146
435 Ga0070697_100015901
436 Ga0070697_100024404
437 Ga0070697_100047905
438 Ga0070697_100049606
439 Ga0070697_100124748
440 Ga0070697_100192728
441 Ga0070697_100315982
442 Ga0070697_100453246
443 Ga0070686_100310651
444 Ga0070695_100018603
445 Ga0070695_100042421
446 Ga0070695_100068428
447 Ga0070696_100028892
448 Ga0070696_100106736
449 Ga0070696_100130995
450 Ga0070696_100153173
451 Ga0070665_100482487
452 Ga0070704_100115364
453 Ga0070704_100126854
454 Ga0068857_100373535
455 Ga0070702_100087865
456 Ga0068866_10155575
457 Ga0068863_100299122
458 Ga0068858_100365170
459 Ga0068862_100161559
460 Ga0081538_10092277
461 Ga0081540_1047645
462 Ga0070717_10097934
463 Ga0070715_10092634
464 Ga0070716_100034308
465 Ga0070716_100066515
466 Ga0070716_100071755
467 Ga0070716_100129759
468 Ga0070716_100218163
469 Ga0070712_100015638
470 Ga0070712_100052166
471 Ga0070712_100062498
472 Ga0070712_100218424
473 Ga0070712_100299165
474 Ga0070712_100379269
475 Ga0075367_10071433
476 Ga0097621_100208077
477 Ga0075428_100158367
478 Ga0075428_100219960
479 Ga0075428_100641583
480 Ga0075431_100024725
481 Ga0075431_100034121
482 Ga0075431_100355314
483 Ga0075433_10003568
484 Ga0075433_10070038
485 Ga0075433_10088106
486 Ga0075433_10106194
487 Ga0075433_10128307
488 Ga0075433_10130095
489 Ga0075433_10201923
490 Ga0075433_10277990
491 Ga0075434_100001043
492 Ga0075434_100126944
493 Ga0075434_100177733
494 Ga0075434_100194691
495 Ga0075434_100206891
496 Ga0075434_100262661
497 Ga0075434_100375196
498 Ga0075434_100459488
499 Ga0075429_100073342
500 Ga0075436_100002029
501 Ga0075436_100013574
502 Ga0075436_100267118
503 Ga0075435_100007289
504 Ga0075435_100070511
505 Ga0075435_100095957
506 Ga0075435_100158036
507 Ga0075435_100261175
508 Ga0075435_100521799
509 Ga0099794_10018629
510 Ga0099794_10130383
511 Ga0099794_10147841
512 Ga0099795_10010513
513 Ga0111539_10356094
514 Ga0105245_10082356
515 Ga0114129_10019485
516 Ga0114129_10040798
517 Ga0114129_10041630
518 Ga0114129_10074059
519 Ga0114129_10095737
520 Ga0114129_10103994
521 Ga0114129_10106440
522 Ga0114129_10133224
523 Ga0114129_10155207
524 Ga0114129_10210222
525 Ga0114129_10318001
526 Ga0114129_10728743
527 Ga0105241_10432607
528 Ga0105242_10022988
529 Ga0105242_10166694
530 Ga0105248_10513546
531 Ga0105249_10159931
532 Ga0099796_10007002
533 Ga0157378_10003772
534 Ga0157378_10122916
535 Ga0157378_10372552
536 Ga0163162_10004709
537 Ga0163162_10020658
538 Ga0163162_10070906
539 Ga0163162_10359356
540 Ga0163162_10702722
541 Ga0157375_10283950
542 Ga0157380_10176543
543 Ga0157379_10204488
544 Ga0157376_10083573
545 Ga0157376_10436875
546 Ga0228598_1002021
547 Ga0228598_1007381
548 Ga0207653_10010462
549 Ga0207653_10013155
550 Ga0207692_10168929
551 Ga0207688_10155758
552 Ga0207685_10014921
553 Ga0207685_10034878
554 Ga0207685_10076402
555 Ga0207685_10100088
556 Ga0207684_10012650
557 Ga0207684_10018550
558 Ga0207684_10025238
559 Ga0207684_10047541
560 Ga0207684_10052973
561 Ga0207684_10152939
562 Ga0207693_10001036
563 Ga0207693_10014674
564 Ga0207693_10096600
565 Ga0207693_10103029
566 Ga0207693_10161025
567 Ga0207693_10187029
568 Ga0207693_10190670
569 Ga0207693_10273768
570 Ga0207663_10011249
571 Ga0207663_10093656
572 Ga0207663_10167668
573 Ga0207663_10249729
574 Ga0207663_10284032
575 Ga0207646_10007087
576 Ga0207646_10008581
577 Ga0207646_10016491
578 Ga0207646_10029407
579 Ga0207646_10098703
580 Ga0207646_10125698
581 Ga0207646_10175708
582 Ga0207646_10353769
583 Ga0207681_10243588
584 Ga0207659_10126241
585 Ga0207700_10104055
586 Ga0207700_10195453
587 Ga0207664_10560798
588 Ga0207686_10159059
589 Ga0207670_10054144
590 Ga0207704_10301972
591 Ga0207665_10002951
592 Ga0207665_10023205
593 Ga0207665_10033940
594 Ga0207665_10072278
595 Ga0207665_10084783
596 Ga0207665_10211744
597 Ga0207665_10290244
598 Ga0207689_10202700
599 Ga0207689_10242492
600 Ga0207689_10303638
601 Ga0207668_10328460
602 Ga0207677_10438242
603 Ga0207703_10080933
604 Ga0207703_10120270
605 Ga0207708_10254054
606 Ga0207708_10397327
607 Ga0207641_10386209
608 Ga0207648_10057247
609 Ga0207675_100078253
610 Ga0209967_1013816
611 Ga0209981_1007505
612 Ga0209999_1011661
613 Ga0209982_1013190
614 Ga0209983_1025896
615 Ga0209588_1017102
616 Ga0209966_1009384
617 Ga0209974_10067940
618 Ga0268265_10236638
619 Ga0307508_10000029
620 Ga0307413_10278904
621 Ga0307414_10102199
622 Ga0373961_0051052
623 Ga0373935_0031861
624 Ga0373935_0293222
625 Ga0373935_0433528
626 Ga0373927_0038389
627 Ga0373947_0002413
628 Ga0373947_0324976
629 Ga0373925_0000166
630 Ga0439439_0011983
631 Ga0439453_0002987
632 Ga0439461_0006061
633 Ga0439431_0002734
634 Ga0439437_001924
635 Ga0439441_018683
636 Ga0439445_0017963
637 Ga0439448_0022404
638 Ga0439450_001310
639 Ga0439454_000279
640 Ga0439457_026956
641 Ga0439463_037680
642 Ga0450913_000307
643 Ga0450917_001049
644 Ga0450888_008414
645 Ga0450894_001120
646 Ga0450900_008511
647 Ga0439458_0017992
648 Ga0439444_0000329
649 Ga0439459_0024238
650 Ga0439464_0001612
651 Ga0439460_0010961
652 Ga0450916_000564
653 Ga0450918_004501
654 Ga0450893_0001440
655 Ga0495592_0191168
656 Ga0495580_0000210
657 Ga0495580_0096003
658 Ga0495664_0011538
659 Ga0495642_0099005
660 Ga0495586_0100950
661 Ga0495586_0212682
662 Ga0495587_0159757
663 Ga0495645_0058412
664 Ga0495667_0041497
665 Ga0495659_0012012
666 Ga0495599_0004692
667 Ga0495658_0188482
668 Ga0495636_0068110
669 Ga0495684_0050387
670 Ga0495602_0197431
671 Ga0496104_0338878
672 Ga0496104_0630933
673 Ga0496106_0066228
674 nmdc:mga05p37_135677_c1
675 nmdc:mga05p37_188075_c1
676 nmdc:mga05p37_33076_c1
677 nmdc:mga05p37_42994_c1
678 nmdc:mga05p37_594999_c1
679 nmdc:mga05p37_623421_c1
680 nmdc:mga05p37_638613_c1
681 nmdc:mga05p37_90403_c1
682 nmdc:mga05p37_932_c1
683 nmdc:mga05p37_94632_c1
684 nmdc:mga09592_137231_c1
685 nmdc:mga09592_55395_c1
686 nmdc:mga06r32_26707_c1
687 nmdc:mga08y16_278823_c1
688 nmdc:mga08y16_301777_c1
689 nmdc:mga08y16_526520_c1
690 nmdc:mga0n895_108300_c1
691 nmdc:mga0n895_210664_c1
692 nmdc:mga0n895_2931_c1
693 nmdc:mga0n895_31916_c1
694 nmdc:mga0n895_332208_c1
695 nmdc:mga0n895_612184_c1
696 nmdc:mga0n895_86183_c1
697 nmdc:mga0rr50_100604_c1
698 nmdc:mga0rr50_10769_c1
699 nmdc:mga0rr50_143529_c1
700 nmdc:mga0rr50_171316_c1
701 nmdc:mga0rr50_198587_c1
702 nmdc:mga0rr50_290040_c1
703 nmdc:mga0rr50_686_c1
704 nmdc:mga0rr50_69905_c1
705 nmdc:mga08x19_129959_c1
706 nmdc:mga08x19_18688_c1
707 nmdc:mga08x19_191094_c1
708 nmdc:mga08x19_1991_c1
709 nmdc:mga08x19_6737_c1
710 nmdc:mga08x19_87281_c1
711 nmdc:mga08x19_95759_c1
712 nmdc:mga0a205_185799_c1
713 nmdc:mga0a205_198937_c1
714 nmdc:mga0a205_219619_c1
715 nmdc:mga0a205_221273_c1
716 nmdc:mga0a205_23712_c1
717 nmdc:mga0a205_327986_c1
718 nmdc:mga0a205_49618_c1
719 nmdc:mga0a205_83189_c1
720 Ga0495612_0220371

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

60

119

0.99

PF03466

LysR_substrate

LysR substrate binding domain

143

353

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xxp-assembly1.cif.gz_B crystal structure of cbnr_dbd-dna complex 0.966 1 83
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.9643 1 86
4ihs-assembly1.cif.gz_B crystal structure of benm_dbd/catb site 1 dna complex 0.9627 1 88
4ihs-assembly3.cif.gz_C crystal structure of benm_dbd/catb site 1 dna complex 0.9622 1 86
4iht-assembly2.cif.gz_C crystal structure of benm_dbd/bena site 1 dna complex 0.9566 1 86
ID Description Score Start End Superfamily
af_P23841_7_96_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9877 1 88 1.10.10.10
af_P77309_1_86_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9828 1 80 1.10.10.10
af_Q47141_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9795 1 82 1.10.10.10
af_P0ACR7_1_84_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9745 2 80 1.10.10.10
af_P37641_3_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9739 2 79 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0F4JEL2-F1-model_v4 LysR family transcriptional regulator 0.9911 1 76 GO:0003677
GO:0003700
GO:0032993
AF-A0A5R1NF86-F1-model_v4 deleted 0.9909 1 73
AF-Q7UTS6-F1-model_v4 Probable transcription regulator, HTH_1 family 0.9822 1 89 GO:0003677
GO:0003700
AF-A0A090SI89-F1-model_v4 deleted 0.9801 1 83
AF-A0A7Y8HXQ6-F1-model_v4 LysR family transcriptional regulator 0.9704 1 79 GO:0000976
GO:0003700

Map