F421289

General Info

Members Datasets Scaffolds Average Seq Length
358 258 342 305

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0008595|Ga0495625_0008595_3495_4481
Length 328
Sequence METLETDRFPYYVPSPRKLGEEFMRLPDLEAWAIFASVVEHRSFSGAADAIGVSKATVSKAVTRLEAHLGQSLFHRTSRRLTLTESGKSLAEHAARILAEAMAAEEAAHDAATAPHGLIRVTAPMTLGLVSLTPALAEFLSDHPGIEIDLNLSDAKVDIVAEGIDVALRIADLPDSSLRARRLGPIAIHIVAAPSYLEKHGRPTHAAQLGEHACLGYTNVTGPWRFVGPGGAEVAVRPAGPLRSNSGDALLPALRAGLGIGMLPDFIVGGDLAAGTLEAILTDWHVPPIALHLLTPPGNLRPARVEALISFLTERFRNICANQGPGGS

Samples

Sample ID Description Type Environment
1 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
4 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
5 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
6 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
7 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
8 2858950400 Achromobacter sp. K91 Isolate Unclassified
9 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
10 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
11 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
12 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
13 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
14 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
15 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
16 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
19 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
20 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
21 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
22 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
23 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
24 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
25 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
26 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
27 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
28 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
29 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
30 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
34 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
35 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
36 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
37 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
38 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
41 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
42 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
43 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
44 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
45 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
46 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
47 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
48 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
49 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
50 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
51 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
52 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
53 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
54 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
55 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
56 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
57 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
58 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
59 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
60 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
61 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
62 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
63 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
64 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
65 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
66 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
67 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
68 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
69 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
70 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
71 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
72 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
73 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
76 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
77 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
83 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
84 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
85 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
86 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
87 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
90 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
91 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
92 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
93 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
94 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
95 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
98 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
100 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
103 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
104 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
105 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
112 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
156 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
159 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
160 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
161 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
162 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
163 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
164 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
165 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
166 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
167 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
168 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
169 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
170 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
171 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
172 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
173 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
174 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
175 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
176 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
177 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
178 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
179 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
180 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
181 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
182 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
183 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
184 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
185 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
186 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
187 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
188 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
189 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
190 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
191 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
192 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
193 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
194 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
195 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
196 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
197 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
198 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
199 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
200 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
201 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
202 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
203 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
204 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
205 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
206 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
207 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
208 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
209 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
210 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
211 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
212 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
213 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
214 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
215 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
216 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
217 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
218 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
219 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
220 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
221 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
222 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
223 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
224 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
225 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
226 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
227 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
228 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
229 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
230 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
231 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
232 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
233 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
234 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
235 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
236 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
237 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
238 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
239 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
240 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
241 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
242 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
243 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
244 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
245 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
246 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
247 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
248 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
249 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
250 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
251 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
252 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
253 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
254 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
255 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
256 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
257 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
258 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.53
Metatranscriptomes 0
Isolates 4.47

Biome Distribution

Category Percentage (%)
Aerial Root 0.84
Bulb 0
Endosphere 23.18
Nodule 0
Rhizoplane 2.51
Rhizosphere 63.97
Stem 0
Stem Tuber 0
Unclassified 9.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1004560 3300001915 Bacteria 3044
2 JGI24740J21852_10015017 3300001979 Bacteria 2839
3 JGI24739J22299_10017214 3300001989 Bacteria 2611
4 JGI24737J22298_10014805 3300001990 Bacteria 2529
5 JGI24737J22298_10017743 3300001990 Bacteria 2290
6 JGI24744J21845_10012381 3300002077 Bacteria 1732
7 JGI25156J39149_1018507 3300002705 Bacteria 1284
8 JGI25150J39212_1000398 3300002774 Bacteria 20361
9 JGI25165J46597_1000095 3300003214 Bacteria 163883
10 JGI25153J46596_10000070 3300003215 Bacteria 117125
11 JGI25153J46596_10000091 3300003215 Bacteria 105614
12 JGI25153J46596_10019450 3300003215 Bacteria 2602
13 rootH2_10099832 3300003320 Bacteria 1186
14 Ga0055525_1000203 3300003759 Bacteria 68926
15 Ga0055535_1000039 3300003761 Bacteria 159377
16 Ga0055542_1000040 3300003762 Bacteria 214035
17 Ga0055529_1000037 3300003763 Bacteria 237307
18 Ga0055529_1000156 3300003763 Bacteria 93167
19 Ga0055529_1001069 3300003763 Bacteria 12694
20 Ga0055537_1001470 3300003773 Bacteria 9160
21 Ga0055537_1001547 3300003773 Bacteria 8796
22 Ga0055524_1001171 3300003775 Bacteria 15663
23 Ga0055536_1008747 3300003781 Bacteria 4296
24 Ga0055530_10000594 3300003791 Bacteria 31300
25 Ga0055530_10007115 3300003791 Bacteria 4794
26 Ga0055540_1003107 3300003792 Bacteria 8242
27 Ga0055531_10000116 3300003794 Bacteria 88368
28 Ga0055531_10010833 3300003794 Bacteria 4481
29 Ga0055531_10016434 3300003794 Bacteria 3191
30 Ga0065165_1002705 3300005262 Bacteria 14222
31 Ga0065165_1022693 3300005262 Bacteria 2144
32 Ga0070658_10000493 3300005327 Bacteria 34309
33 Ga0070670_100052473 3300005331 Bacteria 3502
34 Ga0070660_100018126 3300005339 Bacteria 5138
35 Ga0070661_100007029 3300005344 Bacteria 7766
36 Ga0070659_100085591 3300005366 Bacteria 2521
37 Ga0070659_100177601 3300005366 Bacteria 1746
38 Ga0070667_100072830 3300005367 Bacteria 2928
39 Ga0070709_10025034 3300005434 Bacteria 3521
40 Ga0070714_100080551 3300005435 Plasmid 2833
41 Ga0070714_100096160 3300005435 Bacteria 2602
42 Ga0070713_100019752 3300005436 Bacteria 5155
43 Ga0070710_10008635 3300005437 Bacteria 4963
44 Ga0070710_10020667 3300005437 Bacteria 3419
45 Ga0070711_100217244 3300005439 Bacteria 1484
46 Ga0070663_100031996 3300005455 Bacteria 3621
47 Ga0070663_100061428 3300005455 Bacteria 2706
48 Ga0070678_100000151 3300005456 Bacteria 28884
49 Ga0070678_100189768 3300005456 Bacteria 1689
50 Ga0070678_100480823 3300005456 Bacteria 1093
51 Ga0068867_100014737 3300005459 Bacteria 5541
52 Ga0070706_100156229 3300005467 Bacteria 2129
53 Ga0070698_100008789 3300005471 Bacteria 10867
54 Ga0070684_100172602 3300005535 Bacteria 1964
55 Ga0068853_100050258 3300005539 Bacteria 3586
56 Ga0070665_100000023 3300005548 Bacteria 375278
57 Ga0070665_100316569 3300005548 Bacteria 1564
58 Ga0068855_100492325 3300005563 Bacteria 1333
59 Ga0068854_100023889 3300005578 Bacteria 4179
60 Ga0068856_100387398 3300005614 Bacteria 1417
61 Ga0068852_100004582 3300005616 Bacteria 9788
62 Ga0068852_100157305 3300005616 Bacteria 2118
63 Ga0068859_100012317 3300005617 Bacteria 8605
64 Ga0068864_100003362 3300005618 Bacteria 13219
65 Ga0068861_100000040 3300005719 Bacteria 59725
66 Ga0068851_10115868 3300005834 Bacteria 1435
67 Ga0068858_100000380 3300005842 Bacteria 46520
68 Ga0068858_100001609 3300005842 Bacteria 23039
69 Ga0068860_100001690 3300005843 Bacteria 23583
70 Ga0081540_1051781 3300005983 Bacteria 2027
71 Ga0081539_10007074 3300005985 Bacteria 10376
72 Ga0070717_10030957 3300006028 Bacteria 4301
73 Ga0070712_100021940 3300006175 Bacteria 4199
74 Ga0070712_100152149 3300006175 Bacteria 1777
75 Ga0068865_100215635 3300006881 Bacteria 1498
76 Ga0097620_100012317 3300006931 Bacteria 8605
77 Ga0105240_10008119 3300009093 Bacteria 15069
78 Ga0105245_10002151 3300009098 Bacteria 17853
79 Ga0105243_10000847 3300009148 Bacteria 29024
80 Ga0105243_10009064 3300009148 Bacteria 7601
81 Ga0105241_10078479 3300009174 Bacteria 2580
82 Ga0105242_10227328 3300009176 Bacteria 1670
83 Ga0105248_10002393 3300009177 Bacteria 20837
84 Ga0105248_10005414 3300009177 Bacteria 14027
85 Ga0105237_10001179 3300009545 Bacteria 34921
86 Ga0105237_10429286 3300009545 Bacteria 1327
87 Ga0105238_10008522 3300009551 Bacteria 10261
88 Ga0105239_10000663 3300010375 Bacteria 49003
89 Ga0105239_10191151 3300010375 Bacteria 2291
90 Ga0157373_10103847 3300013100 Bacteria 1999
91 Ga0157371_10000029 3300013102 Bacteria 252131
92 Ga0157371_10158842 3300013102 Bacteria 1614
93 Ga0157370_10237808 3300013104 Bacteria 1685
94 Ga0157369_10210085 3300013105 Bacteria 2040
95 Ga0157369_10277154 3300013105 Bacteria 1747
96 Ga0157378_10058088 3300013297 Bacteria 3450
97 Ga0157378_10219665 3300013297 Bacteria 1806
98 Ga0163162_10004486 3300013306 Bacteria 13449
99 Ga0163162_10830996 3300013306 Bacteria 1040
100 Ga0157372_10750632 3300013307 Bacteria 1135
101 Ga0157380_10117983 3300014326 Bacteria 2242
102 Ga0157379_10106062 3300014968 Bacteria 2522
103 Ga0157376_10117917 3300014969 Bacteria 2348
104 Ga0183362_10002 3300015683 Bacteria 1432711
105 Ga0183363_1006 3300015690 Bacteria 400466
106 Ga0163161_10018355 3300017792 Bacteria 4903
107 Ga0213876_10009405 3300021384 Bacteria 5262
108 Ga0209672_103747 3300025228 Bacteria 3027
109 Ga0209563_100147 3300025230 Bacteria 69021
110 Ga0209437_103856 3300025233 Bacteria 2674
111 Ga0209258_100025 3300025242 Bacteria 534777
112 Ga0209258_103706 3300025242 Bacteria 3176
113 Ga0207425_1000049 3300025245 Bacteria 180735
114 Ga0209677_107346 3300025253 Bacteria 2362
115 Ga0209148_1000011 3300025254 Bacteria 1196503
116 Ga0209148_1002203 3300025254 Bacteria 7179
117 Ga0209759_1000877 3300025256 Bacteria 23001
118 Ga0209129_1001668 3300025258 Bacteria 12020
119 Ga0209233_1000052 3300025261 Bacteria 445813
120 Ga0209565_1000007 3300025263 Bacteria 784361
121 Ga0209565_1000170 3300025263 Bacteria 84580
122 Ga0209455_1000006 3300025272 Bacteria 1196503
123 Ga0209455_1000089 3300025272 Bacteria 235612
124 Ga0209455_1000589 3300025272 Bacteria 23557
125 Ga0209675_1004240 3300025291 Bacteria 6463
126 Ga0209676_1006038 3300025292 Bacteria 6104
127 Ga0209025_1000068 3300025294 Bacteria 294129
128 Ga0209564_1000335 3300025295 Bacteria 91079
129 Ga0209564_1015658 3300025295 Bacteria 3069
130 Ga0209758_1000004 3300025297 Bacteria 1375322
131 Ga0209758_1000023 3300025297 Bacteria 612453
132 Ga0209758_1011544 3300025297 Bacteria 5098
133 Ga0209050_1000001 3300025298 Bacteria 3563507
134 Ga0209050_1000196 3300025298 Bacteria 135678
135 Ga0209050_1006899 3300025298 Bacteria 6573
136 Ga0209050_1009345 3300025298 Bacteria 5034
137 Ga0209256_1000009 3300025299 Bacteria 922071
138 Ga0209256_1000010 3300025299 Bacteria 912110
139 Ga0209051_1000191 3300025303 Bacteria 108763
140 Ga0209257_1000228 3300025304 Bacteria 133390
141 Ga0209257_1003180 3300025304 Bacteria 14609
142 Ga0209257_1003572 3300025304 Bacteria 13185
143 Ga0209257_1003678 3300025304 Bacteria 12808
144 Ga0207656_10002598 3300025321 Bacteria 6104
145 Ga0207647_10020030 3300025904 Bacteria 4491
146 Ga0207647_10022747 3300025904 Bacteria 4159
147 Ga0207685_10029506 3300025905 Bacteria 1942
148 Ga0207699_10001790 3300025906 Bacteria 10088
149 Ga0207699_10179455 3300025906 Bacteria 1422
150 Ga0207645_10039222 3300025907 Bacteria 3035
151 Ga0207705_10001210 3300025909 Bacteria 20932
152 Ga0207654_10048089 3300025911 Bacteria 2440
153 Ga0207695_10005337 3300025913 Bacteria 17099
154 Ga0207695_10016518 3300025913 Bacteria 8631
155 Ga0207695_10173804 3300025913 Bacteria 2078
156 Ga0207671_10017854 3300025914 Bacteria 5458
157 Ga0207671_10046699 3300025914 Bacteria 3205
158 Ga0207693_10047559 3300025915 Bacteria 3370
159 Ga0207693_10138253 3300025915 Bacteria 1915
160 Ga0207693_10233246 3300025915 Bacteria 1445
161 Ga0207663_10083559 3300025916 Bacteria 2098
162 Ga0207657_10019604 3300025919 Bacteria 6415
163 Ga0207657_10075803 3300025919 Bacteria 2838
164 Ga0207649_10000710 3300025920 Bacteria 21878
165 Ga0207694_10004368 3300025924 Bacteria 11042
166 Ga0207650_10361342 3300025925 Bacteria 1196
167 Ga0207659_10179197 3300025926 Bacteria 1677
168 Ga0207687_10000798 3300025927 Bacteria 21269
169 Ga0207700_10108532 3300025928 Bacteria 2229
170 Ga0207690_10010086 3300025932 Bacteria 5613
171 Ga0207706_10019474 3300025933 Bacteria 6106
172 Ga0207709_10000039 3300025935 Bacteria 260127
173 Ga0207669_10000117 3300025937 Bacteria 39781
174 Ga0207669_10000382 3300025937 Bacteria 19815
175 Ga0207691_10221651 3300025940 Bacteria 1640
176 Ga0207711_10001717 3300025941 Bacteria 20140
177 Ga0207711_10002032 3300025941 Bacteria 18299
178 Ga0207661_10295873 3300025944 Bacteria 1450
179 Ga0207667_10000002 3300025949 Bacteria 895662
180 Ga0207667_10000006 3300025949 Bacteria 679876
181 Ga0207651_10058460 3300025960 Bacteria 2665
182 Ga0207640_10001785 3300025981 Bacteria 11558
183 Ga0207640_10019330 3300025981 Bacteria 4022
184 Ga0207658_10262512 3300025986 Bacteria 1472
185 Ga0207703_10000847 3300026035 Bacteria 30021
186 Ga0207703_10001312 3300026035 Bacteria 23010
187 Ga0207639_10006895 3300026041 Bacteria 7739
188 Ga0207639_10017056 3300026041 Bacteria 5146
189 Ga0207639_10038916 3300026041 Bacteria 3540
190 Ga0207678_10016640 3300026067 Bacteria 6460
191 Ga0207678_10276173 3300026067 Bacteria 1441
192 Ga0207702_10034995 3300026078 Bacteria 4200
193 Ga0207648_10047537 3300026089 Bacteria 3761
194 Ga0207676_10002443 3300026095 Bacteria 13239
195 Ga0207674_10024940 3300026116 Bacteria 6382
196 Ga0207675_100000157 3300026118 Bacteria 59865
197 Ga0207683_10000496 3300026121 Bacteria 36404
198 Ga0207683_10114049 3300026121 Bacteria 2421
199 Ga0207698_10004357 3300026142 Bacteria 8617
200 Ga0207698_10053445 3300026142 Bacteria 3101
201 Ga0209371_1004986 3300027312 Bacteria 5489
202 Ga0268266_10000002 3300028379 Bacteria 3059047
203 Ga0268266_10215363 3300028379 Bacteria 1763
204 Ga0268264_10000048 3300028381 Bacteria 334457
205 Ga0307517_10007109 3300028786 Bacteria 16416
206 Ga0307517_10055671 3300028786 Bacteria 3878
207 Ga0307515_10199056 3300028794 Bacteria 1885
208 Ga0268256_1004694 3300030500 Bacteria 5573
209 Ga0265330_10016701 3300031235 Plasmid 3384
210 Ga0265327_10001328 3300031251 Bacteria 32130
211 Ga0307513_10024144 3300031456 Bacteria 7079
212 Ga0307513_10217930 3300031456 Bacteria 1732
213 Ga0307513_10321532 3300031456 Bacteria 1305
214 Ga0307508_10000317 3300031616 Bacteria 58176
215 Ga0307406_10000994 3300031901 Bacteria 15740
216 Ga0307510_10072974 3300033180 Bacteria 3405
217 Ga0373937_0141144 3300036401 Bacteria 2254
218 Ga0436364_1275248 3300037853 Bacteria 1616
219 Ga0237819_01183 3300038705 Bacteria 7350
220 Ga0237816_00202 3300039145 Bacteria 4847
221 Ga0436365_1138701 3300039437 Bacteria 28644
222 Ga0436360_0242588 3300039438 Bacteria 1562
223 Ga0436361_0690638 3300039447 Bacteria 9367
224 Ga0436362_0880034 3300039453 Bacteria 2250
225 Ga0439436_0030454 3300041404 Bacteria 1568
226 Ga0439439_0000197 3300041406 Bacteria 9225
227 Ga0439461_0000051 3300041410 Bacteria 14159
228 Ga0439461_0005441 3300041410 Bacteria 2169
229 Ga0439465_0003536 3300041413 Bacteria 5093
230 Ga0439431_0000131 3300041997 Bacteria 13310
231 Ga0439432_001691 3300042006 Bacteria 8258
232 Ga0439452_001767 3300042010 Bacteria 8429
233 Ga0439446_0044490 3300042156 Bacteria 1314
234 Ga0439434_0003567 3300042435 Bacteria 4543
235 Ga0495629_0041152 3300046459 Bacteria 3252
236 Ga0495638_0000128 3300046460 Bacteria 123567
237 Ga0495650_0000470 3300046471 Bacteria 62114
238 Ga0495650_0001702 3300046471 Bacteria 20215
239 Ga0495650_0034126 3300046471 Bacteria 2257
240 Ga0495639_0058666 3300046475 Bacteria 1761
241 Ga0495584_0004592 3300046491 Bacteria 7400
242 Ga0495584_0052818 3300046491 Bacteria 2045
243 Ga0495585_0001815 3300046492 Bacteria 16168
244 Ga0495596_0043979 3300046500 Bacteria 1759
245 Ga0495607_0003621 3300046501 Bacteria 11730
246 Ga0495607_0072800 3300046501 Bacteria 1912
247 Ga0495583_0000524 3300046506 Bacteria 54376
248 Ga0495583_0001366 3300046506 Bacteria 25162
249 Ga0495583_0002817 3300046506 Bacteria 14221
250 Ga0495583_0103043 3300046506 Bacteria 1216
251 Ga0495606_0000092 3300046507 Bacteria 152369
252 Ga0495606_0002478 3300046507 Bacteria 21361
253 Ga0495631_0088274 3300046518 Bacteria 1335
254 Ga0495643_0000530 3300046522 Bacteria 47567
255 Ga0495643_0019650 3300046522 Bacteria 3904
256 Ga0495643_0046506 3300046522 Bacteria 2352
257 Ga0495643_0152666 3300046522 Bacteria 1142
258 Ga0495648_0000146 3300046524 Bacteria 84443
259 Ga0495648_0025432 3300046524 Bacteria 4008
260 Ga0495663_0001818 3300046525 Bacteria 6592
261 Ga0495666_0122939 3300046526 Bacteria 1215
262 Ga0495642_0002091 3300046528 Bacteria 8263
263 Ga0495654_0001245 3300046530 Bacteria 17990
264 Ga0495587_0034011 3300046536 Bacteria 3075
265 Ga0495622_0000811 3300046557 Bacteria 17289
266 Ga0495633_0000842 3300046558 Bacteria 27022
267 Ga0495668_0000056 3300046616 Bacteria 197862
268 Ga0495668_0006513 3300046616 Bacteria 7640
269 Ga0495611_0015996 3300046648 Bacteria 3207
270 Ga0495611_0113820 3300046648 Bacteria 1260
271 Ga0495625_0000054 3300046660 Bacteria 187599
272 Ga0495625_0000255 3300046660 Bacteria 82750
273 Ga0495625_0008595 3300046660 Bacteria 8690
274 Ga0495625_0009405 3300046660 Bacteria 8179
275 Ga0495669_0000155 3300046684 Bacteria 43475
276 Ga0495670_0076999 3300046691 Bacteria 1695
277 Ga0495649_0000204 3300046694 Bacteria 52437
278 Ga0495589_0003354 3300046794 Bacteria 8689
279 Ga0495600_0005075 3300046809 Bacteria 7912
280 Ga0495660_0030727 3300046810 Bacteria 3025
281 Ga0495683_0023364 3300047323 Bacteria 3177
282 Ga0495687_000077 3300047443 Bacteria 148889
283 Ga0495687_000353 3300047443 Bacteria 58833
284 Ga0495677_0008530 3300047445 Bacteria 3805
285 Ga0495677_0052386 3300047445 Bacteria 1504
286 Ga0495681_0056921 3300047470 Bacteria 1817
287 Ga0495686_0000425 3300047472 Bacteria 66316
288 Ga0495686_0082553 3300047472 Bacteria 1961
289 Ga0495686_0170924 3300047472 Bacteria 1264
290 Ga0495626_0000048 3300048091 Bacteria 161634
291 Ga0496102_0000163 3300048905 Bacteria 89673
292 Ga0496102_0019540 3300048905 Bacteria 5968
293 Ga0496103_0000052 3300048906 Bacteria 149437
294 Ga0496104_0018464 3300048907 Bacteria 6363
295 Ga0496105_0047424 3300048908 Bacteria 3545
296 Ga0496109_0285383 3300048912 Bacteria 1556
297 Ga0496115_0000078 3300048918 Bacteria 89817
298 Ga0496115_0001359 3300048918 Bacteria 17461
299 Ga0496116_0044312 3300048919 Bacteria 3023
300 Ga0496117_0000141 3300048920 Bacteria 158041
301 Ga0496118_0000103 3300048921 Bacteria 158099
302 Ga0496119_0009712 3300048922 Bacteria 8194
303 Ga0496121_0000105 3300048924 Bacteria 191437
304 Ga0496121_0000156 3300048924 Bacteria 149376
305 Ga0496121_0056906 3300048924 Bacteria 3244
306 Ga0496122_0002015 3300048925 Bacteria 30205
307 Ga0496123_0022976 3300048926 Bacteria 4788
308 Ga0496124_0000041 3300048927 Bacteria 303887
309 Ga0496125_0000238 3300048928 Bacteria 113252
310 Ga0496125_0119332 3300048928 Bacteria 1886
311 Ga0496126_0000155 3300048929 Bacteria 158816
312 Ga0496126_0012065 3300048929 Bacteria 8879
313 Ga0501031_0004526 3300049568 Bacteria 9008
314 Ga0501241_003175 3300049758 Bacteria 3125
315 Ga0501035_0092050 3300049822 Bacteria 2668
316 Ga0501044_0000022 3300049823 Bacteria 201689
317 Ga0501044_0233107 3300049823 Bacteria 1788
318 Ga0500610_0000144 3300053079 Bacteria 21374
319 Ga0500635_0008824 3300053080 Bacteria 2777
320 Ga0500643_000466 3300053087 Bacteria 29832
321 Ga0500643_001448 3300053087 Bacteria 13672
322 Ga0500647_0106490 3300053091 Bacteria 1336
323 Ga0500651_0091511 3300053093 Bacteria 1872
324 Ga0500566_0001162 3300053094 Bacteria 15319
325 Ga0500641_0015957 3300053096 Bacteria 2793
326 Ga0500641_0018494 3300053096 Bacteria 2621
327 Ga0500562_007916 3300053108 Bacteria 2683
328 Ga0500595_003283 3300053119 Bacteria 7624
329 Ga0500595_004310 3300053119 Bacteria 6407
330 Ga0500652_071023 3300053131 Bacteria 1443
331 Ga0500658_0002778 3300053134 Bacteria 6718
332 Ga0500658_0009388 3300053134 Bacteria 3608
333 Ga0500559_0039521 3300053136 Bacteria 2052
334 Ga0500568_0007024 3300053139 Bacteria 5569
335 Ga0500573_0000271 3300053140 Bacteria 21909
336 Ga0500616_0086090 3300053153 Bacteria 1568
337 Ga0500619_000886 3300053154 Bacteria 5108
338 Ga0500636_0003608 3300053177 Bacteria 8724
339 Ga0500636_0016274 3300053177 Bacteria 4386
340 Ga0500645_000001 3300053730 Bacteria 455558
341 Ga0500645_001391 3300053730 Bacteria 12342
342 Ga0500596_002262 3300053735 Bacteria 3814

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031251 Ga0265327_10001328 Ga0265327_1000132819 272
2 3300013297 Ga0157378_10058088 Ga0157378_100580885 273
3 3300053096 Ga0500641_0018494 Ga0500641_0018494_700_1611 279
4 3300005842 Ga0068858_100000380 Ga0068858_10000038050 281
5 3300009177 Ga0105248_10005414 Ga0105248_1000541413 281
6 3300013306 Ga0163162_10004486 Ga0163162_100044867 281
7 3300025941 Ga0207711_10002032 Ga0207711_1000203212 281
8 3300026035 Ga0207703_10001312 Ga0207703_100013122 281
9 3300005456 Ga0070678_100480823 Ga0070678_1004808231 282
10 3300005618 Ga0068864_100003362 Ga0068864_10000336212 282
11 3300026095 Ga0207676_10002443 Ga0207676_100024435 282
12 3300003763 Ga0055529_1001069 Ga0055529_10010692 285
13 3300025228 Ga0209672_103747 Ga0209672_1037473 285
14 3300025242 Ga0209258_103706 Ga0209258_1037063 285
15 3300025272 Ga0209455_1000589 Ga0209455_100058913 285
16 3300049822 Ga0501035_0092050 Ga0501035_0092050_455_1375 285
17 3300049823 Ga0501044_0000022 Ga0501044_0000022_109119_110039 285
18 iso_pu_bacteria 8057101203 8057102110 291
19 3300046526 Ga0495666_0122939 Ga0495666_0122939_97_1029 292
20 3300047472 Ga0495686_0000425 Ga0495686_0000425_45782_46792 293
21 3300028794 Ga0307515_10199056 Ga0307515_101990562 294
22 3300031456 Ga0307513_10321532 Ga0307513_103215321 294
23 iso_pu_bacteria 2599185354 2600201524 295
24 3300046501 Ga0495607_0003621 Ga0495607_0003621_7387_8277 296
25 3300013102 Ga0157371_10158842 Ga0157371_101588422 297
26 3300013105 Ga0157369_10277154 Ga0157369_102771542 297
27 iso_pu_bacteria 2946787523 2946789455 297
28 3300005262 Ga0065165_1002705 Ga0065165_10027057 298
29 iso_pu_bacteria 2751185897 2753763401 298
30 iso_pu_bacteria 2830075706 2830078985 298
31 iso_pu_bacteria 2846037992 2846040099 298
32 iso_pu_bacteria 2643221622 2644125903 299
33 iso_pu_bacteria 2885429604 2885431590 299
34 iso_pu_bacteria 2984555340 2984555743 299
35 iso_pu_bacteria 2993356040 2993357159 299
36 iso_pu_bacteria 2993693658 2993696140 299
37 3300005434 Ga0070709_10025034 Ga0070709_100250341 300
38 3300005435 Ga0070714_100096160 Ga0070714_1000961602 300
39 3300005436 Ga0070713_100019752 Ga0070713_1000197522 300
40 3300005437 Ga0070710_10008635 Ga0070710_100086351 300
41 3300005439 Ga0070711_100217244 Ga0070711_1002172441 300
42 3300005983 Ga0081540_1051781 Ga0081540_10517811 300
43 3300006175 Ga0070712_100021940 Ga0070712_1000219401 300
44 3300021384 Ga0213876_10009405 Ga0213876_100094052 300
45 3300025905 Ga0207685_10029506 Ga0207685_100295062 300
46 3300025906 Ga0207699_10001790 Ga0207699_100017906 300
47 3300025915 Ga0207693_10233246 Ga0207693_102332462 300
48 3300025916 Ga0207663_10083559 Ga0207663_100835591 300
49 3300025928 Ga0207700_10108532 Ga0207700_101085322 300
50 3300037853 Ga0436364_1275248 Ga0436364_1275248_603_1550 300
51 3300038705 Ga0237819_01183 Ga0237819_01183_1628_2536 300
52 3300039145 Ga0237816_00202 Ga0237816_00202_1798_2706 300
53 3300039437 Ga0436365_1138701 Ga0436365_1138701_26430_27338 300
54 3300039438 Ga0436360_0242588 Ga0436360_0242588_335_1243 300
55 3300039453 Ga0436362_0880034 Ga0436362_0880034_839_1747 300
56 iso_pu_bacteria 2886627955 2886634001 300
57 3300005843 Ga0068860_100001690 Ga0068860_10000169012 301
58 3300015690 Ga0183363_1006 Ga0183363_1006217 301
59 3300028381 Ga0268264_10000048 Ga0268264_10000048189 301
60 3300031235 Ga0265330_10016701 Ga0265330_100167013 301
61 3300031456 Ga0307513_10217930 Ga0307513_102179302 301
62 3300046691 Ga0495670_0076999 Ga0495670_0076999_720_1625 301
63 3300053087 Ga0500643_000466 Ga0500643_000466_14651_15562 301
64 3300053087 Ga0500643_001448 Ga0500643_001448_5967_6875 301
65 iso_pu_bacteria 2547132103 2547374136 301
66 iso_pu_bacteria 2843690924 2843694449 301
67 iso_pu_bacteria 2858950400 2858952028 301
68 iso_pu_bacteria 2891633521 2891635539 301
69 3300003320 rootH2_10099832 rootH2_100998321 302
70 3300005435 Ga0070714_100080551 Ga0070714_1000805513 302
71 3300005437 Ga0070710_10020667 Ga0070710_100206673 302
72 3300005455 Ga0070663_100031996 Ga0070663_1000319964 302
73 3300005456 Ga0070678_100189768 Ga0070678_1001897682 302
74 3300005616 Ga0068852_100004582 Ga0068852_10000458210 302
75 3300006028 Ga0070717_10030957 Ga0070717_100309573 302
76 3300006175 Ga0070712_100152149 Ga0070712_1001521493 302
77 3300009093 Ga0105240_10008119 Ga0105240_100081195 302
78 3300009545 Ga0105237_10001179 Ga0105237_1000117933 302
79 3300010375 Ga0105239_10000663 Ga0105239_1000066338 302
80 3300013307 Ga0157372_10750632 Ga0157372_107506322 302
81 3300025904 Ga0207647_10022747 Ga0207647_100227475 302
82 3300025906 Ga0207699_10179455 Ga0207699_101794552 302
83 3300025913 Ga0207695_10005337 Ga0207695_100053375 302
84 3300025913 Ga0207695_10016518 Ga0207695_100165187 302
85 3300025914 Ga0207671_10046699 Ga0207671_100466991 302
86 3300025915 Ga0207693_10047559 Ga0207693_100475593 302
87 3300025915 Ga0207693_10138253 Ga0207693_101382532 302
88 3300025919 Ga0207657_10075803 Ga0207657_100758031 302
89 3300025949 Ga0207667_10000006 Ga0207667_10000006492 302
90 3300025981 Ga0207640_10019330 Ga0207640_100193302 302
91 3300026041 Ga0207639_10006895 Ga0207639_100068957 302
92 3300026121 Ga0207683_10114049 Ga0207683_101140492 302
93 3300026142 Ga0207698_10053445 Ga0207698_100534452 302
94 3300028786 Ga0307517_10007109 Ga0307517_1000710916 302
95 3300036401 Ga0373937_0141144 Ga0373937_0141144_289_1200 302
96 3300039447 Ga0436361_0690638 Ga0436361_0690638_6830_7753 302
97 3300046471 Ga0495650_0034126 Ga0495650_0034126_82_990 302
98 3300046492 Ga0495585_0001815 Ga0495585_0001815_9476_10393 302
99 3300046530 Ga0495654_0001245 Ga0495654_0001245_10734_11648 302
100 3300048924 Ga0496121_0000105 Ga0496121_0000105_83037_83945 302
101 3300048924 Ga0496121_0056906 Ga0496121_0056906_949_1857 302
102 3300048928 Ga0496125_0119332 Ga0496125_0119332_102_1016 302
103 3300049823 Ga0501044_0233107 Ga0501044_0233107_742_1650 302
104 3300053730 Ga0500645_001391 Ga0500645_001391_882_1793 302
105 3300002774 JGI25150J39212_1000398 JGI25150J39212_100039812 303
106 3300003214 JGI25165J46597_1000095 JGI25165J46597_1000095107 303
107 3300003215 JGI25153J46596_10000091 JGI25153J46596_1000009169 303
108 3300003215 JGI25153J46596_10019450 JGI25153J46596_100194501 303
109 3300003773 Ga0055537_1001470 Ga0055537_100147010 303
110 3300003775 Ga0055524_1001171 Ga0055524_10011719 303
111 3300003781 Ga0055536_1008747 Ga0055536_10087472 303
112 3300003791 Ga0055530_10000594 Ga0055530_100005948 303
113 3300003791 Ga0055530_10007115 Ga0055530_100071157 303
114 3300003792 Ga0055540_1003107 Ga0055540_10031074 303
115 3300003794 Ga0055531_10000116 Ga0055531_1000011657 303
116 3300003794 Ga0055531_10010833 Ga0055531_100108337 303
117 3300003794 Ga0055531_10016434 Ga0055531_100164341 303
118 3300005262 Ga0065165_1022693 Ga0065165_10226931 303
119 3300005539 Ga0068853_100050258 Ga0068853_1000502582 303
120 3300005719 Ga0068861_100000040 Ga0068861_10000004050 303
121 3300005842 Ga0068858_100001609 Ga0068858_10000160926 303
122 3300009098 Ga0105245_10002151 Ga0105245_100021514 303
123 3300009148 Ga0105243_10009064 Ga0105243_100090644 303
124 3300009551 Ga0105238_10008522 Ga0105238_100085224 303
125 3300013297 Ga0157378_10219665 Ga0157378_102196652 303
126 3300013306 Ga0163162_10830996 Ga0163162_108309961 303
127 3300015683 Ga0183362_10002 Ga0183362_10002595 303
128 3300025233 Ga0209437_103856 Ga0209437_1038562 303
129 3300025245 Ga0207425_1000049 Ga0207425_1000049140 303
130 3300025258 Ga0209129_1001668 Ga0209129_10016689 303
131 3300025261 Ga0209233_1000052 Ga0209233_100005251 303
132 3300025263 Ga0209565_1000007 Ga0209565_100000739 303
133 3300025291 Ga0209675_1004240 Ga0209675_10042406 303
134 3300025292 Ga0209676_1006038 Ga0209676_10060385 303
135 3300025294 Ga0209025_1000068 Ga0209025_1000068112 303
136 3300025297 Ga0209758_1000004 Ga0209758_100000411 303
137 3300025297 Ga0209758_1011544 Ga0209758_10115445 303
138 3300025298 Ga0209050_1000001 Ga0209050_10000011940 303
139 3300025298 Ga0209050_1000196 Ga0209050_1000196105 303
140 3300025298 Ga0209050_1009345 Ga0209050_10093454 303
141 3300025299 Ga0209256_1000009 Ga0209256_1000009119 303
142 3300025299 Ga0209256_1000010 Ga0209256_100001043 303
143 3300025303 Ga0209051_1000191 Ga0209051_1000191129 303
144 3300025304 Ga0209257_1000228 Ga0209257_1000228105 303
145 3300025304 Ga0209257_1003180 Ga0209257_100318012 303
146 3300025304 Ga0209257_1003572 Ga0209257_100357216 303
147 3300025304 Ga0209257_1003678 Ga0209257_100367810 303
148 3300025924 Ga0207694_10004368 Ga0207694_100043684 303
149 3300025927 Ga0207687_10000798 Ga0207687_100007989 303
150 3300026035 Ga0207703_10000847 Ga0207703_1000084727 303
151 3300026041 Ga0207639_10038916 Ga0207639_100389163 303
152 3300026118 Ga0207675_100000157 Ga0207675_10000015719 303
153 3300031616 Ga0307508_10000317 Ga0307508_1000031725 303
154 3300041406 Ga0439439_0000197 Ga0439439_0000197_5112_6026 303
155 3300041410 Ga0439461_0000051 Ga0439461_0000051_10137_11051 303
156 3300041410 Ga0439461_0005441 Ga0439461_0005441_1123_2037 303
157 3300041413 Ga0439465_0003536 Ga0439465_0003536_4121_5035 303
158 3300041997 Ga0439431_0000131 Ga0439431_0000131_11603_12517 303
159 3300042006 Ga0439432_001691 Ga0439432_001691_6246_7160 303
160 3300042156 Ga0439446_0044490 Ga0439446_0044490_71_985 303
161 3300042435 Ga0439434_0003567 Ga0439434_0003567_2522_3436 303
162 3300046460 Ga0495638_0000128 Ga0495638_0000128_107934_108851 303
163 3300046660 Ga0495625_0000054 Ga0495625_0000054_62355_63272 303
164 3300046660 Ga0495625_0008595 Ga0495625_0008595_3495_4481 303
165 3300047472 Ga0495686_0170924 Ga0495686_0170924_72_989 303
166 3300048091 Ga0495626_0000048 Ga0495626_0000048_27064_27984 303
167 3300049758 Ga0501241_003175 Ga0501241_003175_760_1674 303
168 3300053094 Ga0500566_0001162 Ga0500566_0001162_14252_15166 303
169 3300053096 Ga0500641_0015957 Ga0500641_0015957_1138_2055 303
170 3300053119 Ga0500595_003283 Ga0500595_003283_1584_2546 303
171 3300053134 Ga0500658_0002778 Ga0500658_0002778_360_1277 303
172 3300053134 Ga0500658_0009388 Ga0500658_0009388_1922_2836 303
173 3300053136 Ga0500559_0039521 Ga0500559_0039521_476_1399 303
174 3300053139 Ga0500568_0007024 Ga0500568_0007024_4550_5485 303
175 3300001915 JGI24741J21665_1004560 JGI24741J21665_10045604 304
176 3300001979 JGI24740J21852_10015017 JGI24740J21852_100150174 304
177 3300001989 JGI24739J22299_10017214 JGI24739J22299_100172142 304
178 3300001990 JGI24737J22298_10014805 JGI24737J22298_100148052 304
179 3300001990 JGI24737J22298_10017743 JGI24737J22298_100177432 304
180 3300002077 JGI24744J21845_10012381 JGI24744J21845_100123812 304
181 3300002705 JGI25156J39149_1018507 JGI25156J39149_10185072 304
182 3300003215 JGI25153J46596_10000070 JGI25153J46596_1000007024 304
183 3300003759 Ga0055525_1000203 Ga0055525_100020325 304
184 3300003761 Ga0055535_1000039 Ga0055535_10000392 304
185 3300003762 Ga0055542_1000040 Ga0055542_1000040121 304
186 3300003763 Ga0055529_1000037 Ga0055529_1000037100 304
187 3300003763 Ga0055529_1000156 Ga0055529_100015618 304
188 3300003773 Ga0055537_1001547 Ga0055537_10015474 304
189 3300005327 Ga0070658_10000493 Ga0070658_100004936 304
190 3300005331 Ga0070670_100052473 Ga0070670_1000524735 304
191 3300005339 Ga0070660_100018126 Ga0070660_1000181262 304
192 3300005344 Ga0070661_100007029 Ga0070661_1000070298 304
193 3300005366 Ga0070659_100085591 Ga0070659_1000855913 304
194 3300005366 Ga0070659_100177601 Ga0070659_1001776012 304
195 3300005367 Ga0070667_100072830 Ga0070667_1000728302 304
196 3300005455 Ga0070663_100061428 Ga0070663_1000614283 304
197 3300005456 Ga0070678_100000151 Ga0070678_10000015116 304
198 3300005459 Ga0068867_100014737 Ga0068867_1000147371 304
199 3300005467 Ga0070706_100156229 Ga0070706_1001562292 304
200 3300005471 Ga0070698_100008789 Ga0070698_10000878912 304
201 3300005535 Ga0070684_100172602 Ga0070684_1001726022 304
202 3300005548 Ga0070665_100000023 Ga0070665_100000023306 304
203 3300005548 Ga0070665_100316569 Ga0070665_1003165692 304
204 3300005563 Ga0068855_100492325 Ga0068855_1004923252 304
205 3300005578 Ga0068854_100023889 Ga0068854_1000238895 304
206 3300005614 Ga0068856_100387398 Ga0068856_1003873981 304
207 3300005616 Ga0068852_100157305 Ga0068852_1001573053 304
208 3300005617 Ga0068859_100012317 Ga0068859_1000123172 304
209 3300005834 Ga0068851_10115868 Ga0068851_101158681 304
210 3300005985 Ga0081539_10007074 Ga0081539_100070744 304
211 3300006881 Ga0068865_100215635 Ga0068865_1002156351 304
212 3300006931 Ga0097620_100012317 Ga0097620_1000123172 304
213 3300009148 Ga0105243_10000847 Ga0105243_100008479 304
214 3300009174 Ga0105241_10078479 Ga0105241_100784793 304
215 3300009176 Ga0105242_10227328 Ga0105242_102273282 304
216 3300009177 Ga0105248_10002393 Ga0105248_1000239312 304
217 3300009545 Ga0105237_10429286 Ga0105237_104292862 304
218 3300010375 Ga0105239_10191151 Ga0105239_101911513 304
219 3300013100 Ga0157373_10103847 Ga0157373_101038472 304
220 3300013102 Ga0157371_10000029 Ga0157371_1000002947 304
221 3300013104 Ga0157370_10237808 Ga0157370_102378082 304
222 3300013105 Ga0157369_10210085 Ga0157369_102100851 304
223 3300014326 Ga0157380_10117983 Ga0157380_101179832 304
224 3300014968 Ga0157379_10106062 Ga0157379_101060622 304
225 3300014969 Ga0157376_10117917 Ga0157376_101179172 304
226 3300017792 Ga0163161_10018355 Ga0163161_100183552 304
227 3300025230 Ga0209563_100147 Ga0209563_10014726 304
228 3300025242 Ga0209258_100025 Ga0209258_100025252 304
229 3300025253 Ga0209677_107346 Ga0209677_1073462 304
230 3300025254 Ga0209148_1000011 Ga0209148_10000111018 304
231 3300025254 Ga0209148_1002203 Ga0209148_10022036 304
232 3300025256 Ga0209759_1000877 Ga0209759_100087722 304
233 3300025263 Ga0209565_1000170 Ga0209565_100017012 304
234 3300025272 Ga0209455_1000006 Ga0209455_1000006174 304
235 3300025272 Ga0209455_1000089 Ga0209455_1000089155 304
236 3300025295 Ga0209564_1000335 Ga0209564_100033550 304
237 3300025295 Ga0209564_1015658 Ga0209564_10156584 304
238 3300025297 Ga0209758_1000023 Ga0209758_1000023401 304
239 3300025298 Ga0209050_1006899 Ga0209050_10068991 304
240 3300025321 Ga0207656_10002598 Ga0207656_100025988 304
241 3300025904 Ga0207647_10020030 Ga0207647_100200306 304
242 3300025907 Ga0207645_10039222 Ga0207645_100392222 304
243 3300025909 Ga0207705_10001210 Ga0207705_1000121016 304
244 3300025911 Ga0207654_10048089 Ga0207654_100480893 304
245 3300025913 Ga0207695_10173804 Ga0207695_101738041 304
246 3300025914 Ga0207671_10017854 Ga0207671_100178542 304
247 3300025919 Ga0207657_10019604 Ga0207657_100196042 304
248 3300025920 Ga0207649_10000710 Ga0207649_1000071019 304
249 3300025925 Ga0207650_10361342 Ga0207650_103613422 304
250 3300025926 Ga0207659_10179197 Ga0207659_101791972 304
251 3300025932 Ga0207690_10010086 Ga0207690_100100863 304
252 3300025933 Ga0207706_10019474 Ga0207706_1001947410 304
253 3300025935 Ga0207709_10000039 Ga0207709_10000039188 304
254 3300025937 Ga0207669_10000117 Ga0207669_1000011737 304
255 3300025937 Ga0207669_10000382 Ga0207669_1000038214 304
256 3300025940 Ga0207691_10221651 Ga0207691_102216512 304
257 3300025941 Ga0207711_10001717 Ga0207711_1000171714 304
258 3300025944 Ga0207661_10295873 Ga0207661_102958732 304
259 3300025949 Ga0207667_10000002 Ga0207667_10000002869 304
260 3300025960 Ga0207651_10058460 Ga0207651_100584602 304
261 3300025981 Ga0207640_10001785 Ga0207640_100017853 304
262 3300025986 Ga0207658_10262512 Ga0207658_102625122 304
263 3300026041 Ga0207639_10017056 Ga0207639_100170563 304
264 3300026067 Ga0207678_10016640 Ga0207678_100166402 304
265 3300026067 Ga0207678_10276173 Ga0207678_102761732 304
266 3300026078 Ga0207702_10034995 Ga0207702_100349953 304
267 3300026089 Ga0207648_10047537 Ga0207648_100475374 304
268 3300026116 Ga0207674_10024940 Ga0207674_100249408 304
269 3300026121 Ga0207683_10000496 Ga0207683_1000049625 304
270 3300026142 Ga0207698_10004357 Ga0207698_100043578 304
271 3300027312 Ga0209371_1004986 Ga0209371_10049866 304
272 3300028379 Ga0268266_10000002 Ga0268266_100000021175 304
273 3300028379 Ga0268266_10215363 Ga0268266_102153632 304
274 3300028786 Ga0307517_10055671 Ga0307517_100556714 304
275 3300030500 Ga0268256_1004694 Ga0268256_10046942 304
276 3300031456 Ga0307513_10024144 Ga0307513_100241445 304
277 3300031901 Ga0307406_10000994 Ga0307406_1000099412 304
278 3300033180 Ga0307510_10072974 Ga0307510_100729743 304
279 3300041404 Ga0439436_0030454 Ga0439436_0030454_23_943 304
280 3300042010 Ga0439452_001767 Ga0439452_001767_5645_6571 304
281 3300046459 Ga0495629_0041152 Ga0495629_0041152_96_1010 304
282 3300046471 Ga0495650_0000470 Ga0495650_0000470_20409_21323 304
283 3300046471 Ga0495650_0001702 Ga0495650_0001702_15930_16862 304
284 3300046475 Ga0495639_0058666 Ga0495639_0058666_489_1403 304
285 3300046491 Ga0495584_0004592 Ga0495584_0004592_520_1437 304
286 3300046491 Ga0495584_0052818 Ga0495584_0052818_168_1085 304
287 3300046500 Ga0495596_0043979 Ga0495596_0043979_14_931 304
288 3300046501 Ga0495607_0072800 Ga0495607_0072800_960_1877 304
289 3300046506 Ga0495583_0000524 Ga0495583_0000524_21902_22858 304
290 3300046506 Ga0495583_0001366 Ga0495583_0001366_15687_16601 304
291 3300046506 Ga0495583_0002817 Ga0495583_0002817_11561_12478 304
292 3300046506 Ga0495583_0103043 Ga0495583_0103043_124_1041 304
293 3300046507 Ga0495606_0000092 Ga0495606_0000092_95821_96738 304
294 3300046507 Ga0495606_0002478 Ga0495606_0002478_9562_10518 304
295 3300046518 Ga0495631_0088274 Ga0495631_0088274_296_1213 304
296 3300046522 Ga0495643_0000530 Ga0495643_0000530_226_1143 304
297 3300046522 Ga0495643_0019650 Ga0495643_0019650_2405_3322 304
298 3300046522 Ga0495643_0046506 Ga0495643_0046506_1249_2166 304
299 3300046522 Ga0495643_0152666 Ga0495643_0152666_121_1038 304
300 3300046524 Ga0495648_0000146 Ga0495648_0000146_81151_82068 304
301 3300046524 Ga0495648_0025432 Ga0495648_0025432_2301_3215 304
302 3300046525 Ga0495663_0001818 Ga0495663_0001818_5414_6328 304
303 3300046528 Ga0495642_0002091 Ga0495642_0002091_5534_6451 304
304 3300046536 Ga0495587_0034011 Ga0495587_0034011_930_1844 304
305 3300046557 Ga0495622_0000811 Ga0495622_0000811_13097_14011 304
306 3300046558 Ga0495633_0000842 Ga0495633_0000842_755_1669 304
307 3300046616 Ga0495668_0000056 Ga0495668_0000056_144995_145912 304
308 3300046616 Ga0495668_0006513 Ga0495668_0006513_5560_6516 304
309 3300046648 Ga0495611_0015996 Ga0495611_0015996_459_1376 304
310 3300046648 Ga0495611_0113820 Ga0495611_0113820_212_1129 304
311 3300046660 Ga0495625_0000255 Ga0495625_0000255_26224_27141 304
312 3300046660 Ga0495625_0009405 Ga0495625_0009405_4885_5802 304
313 3300046684 Ga0495669_0000155 Ga0495669_0000155_22875_23792 304
314 3300046694 Ga0495649_0000204 Ga0495649_0000204_40244_41200 304
315 3300046794 Ga0495589_0003354 Ga0495589_0003354_6875_7831 304
316 3300046809 Ga0495600_0005075 Ga0495600_0005075_6298_7212 304
317 3300046810 Ga0495660_0030727 Ga0495660_0030727_429_1346 304
318 3300047323 Ga0495683_0023364 Ga0495683_0023364_1004_1921 304
319 3300047443 Ga0495687_000077 Ga0495687_000077_5646_6563 304
320 3300047443 Ga0495687_000353 Ga0495687_000353_25752_26669 304
321 3300047445 Ga0495677_0008530 Ga0495677_0008530_1905_2822 304
322 3300047445 Ga0495677_0052386 Ga0495677_0052386_211_1128 304
323 3300047470 Ga0495681_0056921 Ga0495681_0056921_653_1570 304
324 3300047472 Ga0495686_0082553 Ga0495686_0082553_879_1832 304
325 3300048905 Ga0496102_0000163 Ga0496102_0000163_38617_39531 304
326 3300048905 Ga0496102_0019540 Ga0496102_0019540_677_1603 304
327 3300048906 Ga0496103_0000052 Ga0496103_0000052_107016_107930 304
328 3300048907 Ga0496104_0018464 Ga0496104_0018464_929_1843 304
329 3300048908 Ga0496105_0047424 Ga0496105_0047424_2216_3130 304
330 3300048912 Ga0496109_0285383 Ga0496109_0285383_57_974 304
331 3300048918 Ga0496115_0000078 Ga0496115_0000078_50176_51090 304
332 3300048918 Ga0496115_0001359 Ga0496115_0001359_8601_9530 304
333 3300048919 Ga0496116_0044312 Ga0496116_0044312_2099_3013 304
334 3300048920 Ga0496117_0000141 Ga0496117_0000141_50111_51025 304
335 3300048921 Ga0496118_0000103 Ga0496118_0000103_50169_51083 304
336 3300048922 Ga0496119_0009712 Ga0496119_0009712_5073_5987 304
337 3300048924 Ga0496121_0000156 Ga0496121_0000156_106998_107912 304
338 3300048925 Ga0496122_0002015 Ga0496122_0002015_20141_21058 304
339 3300048926 Ga0496123_0022976 Ga0496123_0022976_2210_3127 304
340 3300048927 Ga0496124_0000041 Ga0496124_0000041_108889_109803 304
341 3300048928 Ga0496125_0000238 Ga0496125_0000238_28792_29709 304
342 3300048929 Ga0496126_0000155 Ga0496126_0000155_50163_51077 304
343 3300048929 Ga0496126_0012065 Ga0496126_0012065_2029_2970 304
344 3300049568 Ga0501031_0004526 Ga0501031_0004526_5973_6908 304
345 3300053079 Ga0500610_0000144 Ga0500610_0000144_10302_11219 304
346 3300053080 Ga0500635_0008824 Ga0500635_0008824_1159_2115 304
347 3300053091 Ga0500647_0106490 Ga0500647_0106490_333_1247 304
348 3300053093 Ga0500651_0091511 Ga0500651_0091511_138_1094 304
349 3300053108 Ga0500562_007916 Ga0500562_007916_444_1364 304
350 3300053119 Ga0500595_004310 Ga0500595_004310_909_1823 304
351 3300053131 Ga0500652_071023 Ga0500652_071023_149_1105 304
352 3300053140 Ga0500573_0000271 Ga0500573_0000271_17901_18851 304
353 3300053153 Ga0500616_0086090 Ga0500616_0086090_296_1216 304
354 3300053154 Ga0500619_000886 Ga0500619_000886_1403_2317 304
355 3300053177 Ga0500636_0003608 Ga0500636_0003608_2575_3489 304
356 3300053177 Ga0500636_0016274 Ga0500636_0016274_2813_3769 304
357 3300053730 Ga0500645_000001 Ga0500645_000001_320986_321903 304
358 3300053735 Ga0500596_002262 Ga0500596_002262_1416_2330 304

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

29

88

0.96

PF03466

LysR_substrate

LysR substrate binding domain

112

317

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x0n-assembly3.cif.gz_F regulatory domain of variant c227s aphb from vibrio vulnificus 0.9073 94 292
1fse-assembly2.cif.gz_C crystal structure of the bacillus subtilis regulatory protein gere 0.9064 7 48
7trv-assembly1.cif.gz_A crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9028 1 86
7trv-assembly1.cif.gz_B crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9018 2 86
5x0n-assembly3.cif.gz_F regulatory domain of variant c227s aphb from vibrio vulnificus 0.898 94 292
ID Description Score Start End Superfamily
af_P52696_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9485 5 87 1.10.10.10
3fzvC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9446 6 75 1.10.10.10
af_P52044_6_90_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9228 7 86 1.10.10.10
af_P0ACR4_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9218 6 83 1.10.10.10
af_P10151_15_101_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9172 3 79 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A850QN73-F1-model_v4 LysR family transcriptional regulator 0.9223 98 297 GO:0003700
GO:0006351
GO:0043565
AF-A0A2X3H033-F1-model_v4 Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme 0.9042 95 295 GO:0003700
GO:0006351
GO:0043565
AF-A0A5T3RIK7-F1-model_v4 LysR family transcriptional regulator 0.899 96 292 GO:0003700
GO:0006351
GO:0043565
AF-A0A447T6W0-F1-model_v4 D-malate degradation protein R 0.8944 90 294 GO:0003700
GO:0006351
GO:0043565
AF-A0A850QN73-F1-model_v4 LysR family transcriptional regulator 0.8924 98 297 GO:0003700
GO:0006351
GO:0043565

Feature Viewer

pLDDT pTM Quality
90.79 0.79 High
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Predicted Structure (AlphaFold2)

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