F420404

General Info

Members Datasets Scaffolds Average Seq Length
356 209 351 588

Family's Representative Sequence

Representative Sequence 3300005354|Ga0070675_100018252|Ga0070675_1000182522
Length 626
Sequence MSRTMGRHATVFPLAPVVRFAARRTPASLPPRRRFPLSFSTRVHSGLATLALACAAPVTQPAWCLKSNQNAQVLLDVMAKFGPEGAARLGIPGYDEAITDLSAGFEERVNAATASAAAELKKRLESESDPPVRQDLDILIRAAEQQIKGNELDHKFNQPYLSASAVVFQGLRALLDDQVSPERRKAALVRLRRYAGQEKGYTPISELAMARMRERMKEDLRKPFKDEVEKDLANSTRYIDGIGQLFTKYKLKGWEKNYATLKTQLTAFDAFVKTEILPTARTDFRQPPEIYAFSLEELGVDMPIDELQSRAKTSFQETQRAMQALAPLVAKEKGWKATDYRDVIKELKKSQLTGDAILAHYLKRSKEVEEIIRRESIVTVPAREMEIKLASEAESAAIPAPNMRPPRMIGNTGERGTFMLPLRIPGAPGEKEKQFDDFTHEAASWTLCAHEGRPGHELQFASVVERGVSLARALFAFNSVNAEGWGLYAEAEMVPYEPLDGQLIALQNRLMRNARAFLDPGLQLGTVTRDEAYRVLRDDVCLSDAMATQEVERYLFKSPGQATSYFVGYSRLLEIREDAQRALGPRFDRKRFNDFVLAQGLVPPSLLRKAVTEEFIPSLSQQTSTN

Samples

Sample ID Description Type Environment
1 2739367700 Dyella sp. YR388 Isolate Unclassified
2 2884411467 Dyella sp. AD56 Isolate Rhizosphere
3 2928963466 Dyella japonica 1073 Isolate Unclassified
4 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
9 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
10 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
11 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
12 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
13 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
14 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
18 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
19 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
20 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
21 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
22 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
23 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
24 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
27 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
28 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
29 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
30 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
31 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
35 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
36 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
37 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
38 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
39 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
40 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
41 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
44 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
45 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
46 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
47 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
48 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
49 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
50 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
51 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
54 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
55 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
56 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
57 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
58 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
59 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
60 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
61 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
62 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
63 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
64 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
65 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
66 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
67 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
68 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
69 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
70 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
71 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
72 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
73 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
74 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
77 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
87 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
88 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
89 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
90 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
91 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
97 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
98 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
100 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
101 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
103 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
104 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
105 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
109 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
112 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
113 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
114 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
116 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
144 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
147 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
148 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
149 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
150 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
151 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
152 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
153 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
154 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
155 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
156 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
157 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
158 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
159 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
160 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
161 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
162 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
163 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
164 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
165 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
166 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
167 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
168 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
169 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
170 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
171 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
172 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
173 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
174 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
175 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
176 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
177 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
178 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
179 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
180 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
181 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
182 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
183 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
184 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
185 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
186 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
187 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
188 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
189 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
190 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
191 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
192 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
193 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
196 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
200 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
201 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
202 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
203 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
204 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
205 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
206 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
207 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
208 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
209 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.03
Metatranscriptomes 0.56
Isolates 1.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 32.58
Nodule 0
Rhizoplane 1.69
Rhizosphere 54.49
Stem 0
Stem Tuber 0
Unclassified 11.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10016547 3300001979 Bacteria 2662
2 JGI24739J22299_10010617 3300001989 Bacteria 3417
3 JGI24739J22299_10020471 3300001989 Bacteria 2364
4 JGI24735J21928_10002380 3300002067 Bacteria 6540
5 JGI25156J39149_1000788 3300002705 Bacteria 16328
6 JGI25156J39149_1003440 3300002705 Bacteria 5182
7 JGI25156J39149_1009810 3300002705 Bacteria 2297
8 JGI25162J39368_1000392 3300002737 Bacteria 36961
9 JGI25162J39368_1000457 3300002737 Bacteria 31976
10 JGI25162J39368_1001258 3300002737 Bacteria 14480
11 JGI25162J39368_1002730 3300002737 Bacteria 6346
12 JGI25157J39369_1000195 3300002741 Bacteria 51278
13 JGI25157J39369_1000223 3300002741 Bacteria 45691
14 JGI25157J39369_1000511 3300002741 Bacteria 23826
15 JGI25163J39215_1000336 3300002771 Bacteria 15604
16 JGI25164J39214_1000024 3300002772 Bacteria 165608
17 JGI25164J39214_1000174 3300002772 Bacteria 60057
18 JGI25164J39214_1000336 3300002772 Bacteria 29991
19 JGI25165J46597_1000063 3300003214 Bacteria 205051
20 JGI25165J46597_1000394 3300003214 Bacteria 46232
21 JGI25165J46597_1002367 3300003214 Bacteria 6299
22 rootH1_10048142 3300003316 Bacteria 4325
23 rootH1_10101531 3300003316 Bacteria 5076
24 rootH2_10036585 3300003320 Bacteria 30375
25 rootH2_10105433 3300003320 Bacteria 4426
26 rootL2_10094700 3300003322 Bacteria 3580
27 Ga0006562J51391_1112987 3300003578 Bacteria 13486
28 Ga0006562J51391_1112988 3300003578 Bacteria 13340
29 Ga0055538_1001170 3300003751 Bacteria 5563
30 Ga0055533_1001001 3300003756 Bacteria 8210
31 Ga0055525_1000148 3300003759 Bacteria 94868
32 Ga0055525_1000270 3300003759 Bacteria 48606
33 Ga0055527_1000171 3300003760 Bacteria 44757
34 Ga0055527_1000225 3300003760 Bacteria 36280
35 Ga0055535_1000304 3300003761 Bacteria 50151
36 Ga0055535_1000327 3300003761 Bacteria 48055
37 Ga0055535_1000479 3300003761 Bacteria 36247
38 Ga0055535_1001036 3300003761 Bacteria 17528
39 Ga0055535_1001072 3300003761 Bacteria 16843
40 Ga0055542_1000354 3300003762 Bacteria 48055
41 Ga0055542_1000472 3300003762 Bacteria 37631
42 Ga0055542_1000484 3300003762 Bacteria 36961
43 Ga0055542_1000494 3300003762 Bacteria 36226
44 Ga0055542_1001030 3300003762 Bacteria 17500
45 Ga0055542_1001359 3300003762 Bacteria 12575
46 Ga0055529_1000262 3300003763 Bacteria 62770
47 Ga0055529_1000381 3300003763 Bacteria 48055
48 Ga0055529_1000387 3300003763 Bacteria 47628
49 Ga0055529_1000631 3300003763 Bacteria 26012
50 Ga0055526_1000003 3300003771 Bacteria 413092
51 Ga0055537_1000153 3300003773 Bacteria 51908
52 Ga0055524_1000002 3300003775 Bacteria 459550
53 Ga0055524_1007940 3300003775 Bacteria 4455
54 Ga0055524_1018208 3300003775 Bacteria 2447
55 Ga0055536_1007170 3300003781 Bacteria 5039
56 Ga0055534_1000050 3300003784 Bacteria 92561
57 Ga0055528_1000001 3300003790 Bacteria 402384
58 Ga0055530_10001611 3300003791 Bacteria 16187
59 Ga0055531_10015873 3300003794 Bacteria 3287
60 Ga0055531_10017683 3300003794 Bacteria 2993
61 Ga0055531_10022397 3300003794 Bacteria 2408
62 Ga0065165_1002207 3300005262 Bacteria 17409
63 Ga0068869_100101462 3300005334 Bacteria 2177
64 Ga0070689_100001673 3300005340 Bacteria 14155
65 Ga0070661_100024383 3300005344 Bacteria 4339
66 Ga0070668_100019428 3300005347 Bacteria 5114
67 Ga0070669_100000046 3300005353 Bacteria 119919
68 Ga0070675_100018252 3300005354 Bacteria 5584
69 Ga0070673_100020066 3300005364 Bacteria 4812
70 Ga0070659_100068950 3300005366 Bacteria 2807
71 Ga0070714_100000073 3300005435 Bacteria 88847
72 Ga0070700_100006896 3300005441 Bacteria 6100
73 Ga0070663_100013876 3300005455 Bacteria 5154
74 Ga0070662_100018901 3300005457 Bacteria 4668
75 Ga0070681_10110247 3300005458 Bacteria 2692
76 Ga0070685_10031081 3300005466 Unclassified 2980
77 Ga0070697_100002994 3300005536 Bacteria 12970
78 Ga0068853_100053368 3300005539 Bacteria 3481
79 Ga0070672_100001386 3300005543 Bacteria 14948
80 Ga0070686_100048285 3300005544 Unclassified 2696
81 Ga0070665_100000137 3300005548 Bacteria 137413
82 Ga0070665_100043096 3300005548 Bacteria 4536
83 Ga0070704_100124238 3300005549 Bacteria 1988
84 Ga0068855_100005171 3300005563 Bacteria 15911
85 Ga0068855_100011125 3300005563 Bacteria 10863
86 Ga0070664_100071459 3300005564 Bacteria 2974
87 Ga0068857_100026426 3300005577 Bacteria 5117
88 Ga0068857_100043361 3300005577 Bacteria 3991
89 Ga0068854_100001149 3300005578 Bacteria 15911
90 Ga0068856_100007303 3300005614 Bacteria 10784
91 Ga0068859_100030054 3300005617 Bacteria 5452
92 Ga0068864_100073314 3300005618 Bacteria 2985
93 Ga0068861_100047723 3300005719 Bacteria 3234
94 Ga0068861_100051498 3300005719 Bacteria 3126
95 Ga0068851_10003142 3300005834 Bacteria 7324
96 Ga0068860_100011283 3300005843 Bacteria 8804
97 Ga0068862_100062894 3300005844 Bacteria 3193
98 Ga0068862_100080397 3300005844 Bacteria 2826
99 Ga0070717_10000035 3300006028 Bacteria 126598
100 Ga0075366_10003933 3300006195 Bacteria 7921
101 Ga0075366_10059415 3300006195 Bacteria 2271
102 Ga0075428_100005767 3300006844 Bacteria 13750
103 Ga0075428_100012925 3300006844 Bacteria 9286
104 Ga0075428_100062488 3300006844 Bacteria 4077
105 Ga0075428_100116072 3300006844 Bacteria 2916
106 Ga0075430_100022186 3300006846 Bacteria 5397
107 Ga0075433_10030775 3300006852 Bacteria 4582
108 Ga0075434_100043478 3300006871 Bacteria 4456
109 Ga0097620_100030054 3300006931 Bacteria 5452
110 Ga0105240_10000241 3300009093 Bacteria 108694
111 Ga0105240_10000756 3300009093 Bacteria 58962
112 Ga0105247_10048374 3300009101 Bacteria 2611
113 Ga0114129_10019488 3300009147 Bacteria 9661
114 Ga0105248_10079335 3300009177 Bacteria 3690
115 Ga0105237_10000401 3300009545 Bacteria 61614
116 Ga0105237_10032571 3300009545 Bacteria 5276
117 Ga0105238_10074244 3300009551 Bacteria 3394
118 Ga0105239_10010650 3300010375 Bacteria 10286
119 Ga0105239_10023983 3300010375 Bacteria 6719
120 Ga0105239_10062403 3300010375 Bacteria 4090
121 Ga0157373_10064998 3300013100 Bacteria 2582
122 Ga0157370_10070755 3300013104 Bacteria 3293
123 Ga0157369_10159088 3300013105 Bacteria 2385
124 Ga0163162_10074921 3300013306 Bacteria 3444
125 Ga0157372_10011460 3300013307 Bacteria 9428
126 Ga0157372_10139405 3300013307 Bacteria 2793
127 Ga0157375_10083997 3300013308 Bacteria 3231
128 Ga0157380_10004832 3300014326 Bacteria 9387
129 Ga0182008_10012680 3300014497 Bacteria 4444
130 Ga0157376_10036493 3300014969 Bacteria 3983
131 Ga0183368_1002 3300015687 Bacteria 1865598
132 Ga0183360_10003 3300015689 Bacteria 713221
133 Ga0213872_10001537 3300021361 Bacteria 14827
134 Ga0209760_100147 3300025207 Bacteria 43787
135 Ga0209784_100042 3300025224 Bacteria 218070
136 Ga0209674_100014 3300025226 Bacteria 704989
137 Ga0209674_100279 3300025226 Bacteria 38524
138 Ga0209672_100004 3300025228 Bacteria 1467504
139 Ga0209672_100022 3300025228 Bacteria 374313
140 Ga0209672_100168 3300025228 Bacteria 55336
141 Ga0209672_100435 3300025228 Bacteria 24007
142 Ga0209672_101375 3300025228 Bacteria 9061
143 Ga0209672_101917 3300025228 Bacteria 5939
144 Ga0209563_100132 3300025230 Bacteria 95059
145 Ga0207427_100058 3300025231 Bacteria 192979
146 Ga0207427_100101 3300025231 Bacteria 120866
147 Ga0207427_100128 3300025231 Bacteria 94808
148 Ga0207427_101847 3300025231 Bacteria 6734
149 Ga0209437_100074 3300025233 Bacteria 300858
150 Ga0209437_100090 3300025233 Bacteria 247138
151 Ga0209437_100142 3300025233 Bacteria 165628
152 Ga0209437_100162 3300025233 Bacteria 147864
153 Ga0209258_100003 3300025242 Bacteria 1467504
154 Ga0209258_100004 3300025242 Bacteria 1376422
155 Ga0209258_100127 3300025242 Bacteria 177606
156 Ga0209258_100307 3300025242 Bacteria 77305
157 Ga0209258_100769 3300025242 Bacteria 19661
158 Ga0209258_100820 3300025242 Bacteria 17552
159 Ga0209646_1000431 3300025246 Bacteria 23248
160 Ga0209646_1002685 3300025246 Bacteria 3810
161 Ga0209026_1000072 3300025250 Bacteria 205447
162 Ga0209026_1000186 3300025250 Bacteria 90910
163 Ga0209026_1000568 3300025250 Bacteria 24797
164 Ga0209026_1003121 3300025250 Bacteria 5644
165 Ga0209148_1000005 3300025254 Bacteria 1806504
166 Ga0209148_1000025 3300025254 Bacteria 663262
167 Ga0209148_1000036 3300025254 Bacteria 530505
168 Ga0209148_1000053 3300025254 Bacteria 373506
169 Ga0209148_1000371 3300025254 Bacteria 55165
170 Ga0209148_1001026 3300025254 Bacteria 17552
171 Ga0209759_1000510 3300025256 Bacteria 42169
172 Ga0209759_1000642 3300025256 Bacteria 32622
173 Ga0209759_1001237 3300025256 Bacteria 15586
174 Ga0209129_1002265 3300025258 Bacteria 9607
175 Ga0209233_1000040 3300025261 Bacteria 530395
176 Ga0209233_1000077 3300025261 Bacteria 349570
177 Ga0209233_1000141 3300025261 Bacteria 192978
178 Ga0209565_1000002 3300025263 Bacteria 1423083
179 Ga0209455_1000004 3300025272 Bacteria 1467504
180 Ga0209455_1000007 3300025272 Bacteria 1157983
181 Ga0209455_1000040 3300025272 Bacteria 430197
182 Ga0209455_1000071 3300025272 Bacteria 300858
183 Ga0209455_1009889 3300025272 Bacteria 2466
184 Ga0209673_1000002 3300025273 Bacteria 1423083
185 Ga0209673_1002138 3300025273 Bacteria 14720
186 Ga0209673_1004359 3300025273 Bacteria 7622
187 Ga0209130_1003267 3300025284 Bacteria 7078
188 Ga0209675_1000002 3300025291 Bacteria 1423083
189 Ga0209676_1001312 3300025292 Bacteria 25251
190 Ga0209676_1001993 3300025292 Bacteria 16165
191 Ga0209676_1002699 3300025292 Bacteria 11982
192 Ga0209676_1003466 3300025292 Bacteria 9685
193 Ga0209025_1001633 3300025294 Bacteria 27859
194 Ga0209025_1024911 3300025294 Bacteria 3070
195 Ga0209564_1000004 3300025295 Bacteria 1424639
196 Ga0209564_1007409 3300025295 Bacteria 5676
197 Ga0209758_1000247 3300025297 Bacteria 110976
198 Ga0209050_1003661 3300025298 Bacteria 11102
199 Ga0209050_1008293 3300025298 Bacteria 5594
200 Ga0209256_1000004 3300025299 Bacteria 1424643
201 Ga0209256_1001661 3300025299 Bacteria 21628
202 Ga0209256_1001771 3300025299 Bacteria 20505
203 Ga0209051_1007950 3300025303 Bacteria 5706
204 Ga0209257_1000080 3300025304 Bacteria 312038
205 Ga0209257_1000474 3300025304 Bacteria 73194
206 Ga0209257_1000751 3300025304 Bacteria 48987
207 Ga0209257_1000965 3300025304 Bacteria 39472
208 Ga0209257_1002299 3300025304 Bacteria 19390
209 Ga0209257_1003092 3300025304 Bacteria 14960
210 Ga0209257_1005647 3300025304 Bacteria 8647
211 Ga0207656_10003315 3300025321 Bacteria 5514
212 Ga0207647_10000639 3300025904 Bacteria 27326
213 Ga0207647_10005187 3300025904 Bacteria 9587
214 Ga0207647_10011286 3300025904 Bacteria 6270
215 Ga0207645_10024406 3300025907 Bacteria 3920
216 Ga0207705_10009200 3300025909 Bacteria 7194
217 Ga0207707_10057259 3300025912 Bacteria 3393
218 Ga0207695_10000442 3300025913 Bacteria 90842
219 Ga0207695_10000443 3300025913 Bacteria 90818
220 Ga0207695_10000800 3300025913 Bacteria 58751
221 Ga0207671_10000037 3300025914 Bacteria 230395
222 Ga0207657_10008003 3300025919 Bacteria 10775
223 Ga0207681_10000080 3300025923 Bacteria 86343
224 Ga0207681_10047317 3300025923 Bacteria 2897
225 Ga0207694_10025378 3300025924 Bacteria 4505
226 Ga0207694_10105977 3300025924 Bacteria 2232
227 Ga0207650_10037387 3300025925 Bacteria 3537
228 Ga0207664_10000041 3300025929 Bacteria 154806
229 Ga0207690_10000169 3300025932 Bacteria 50879
230 Ga0207706_10054534 3300025933 Bacteria 3528
231 Ga0207670_10001535 3300025936 Bacteria 12127
232 Ga0207704_10079479 3300025938 Bacteria 2113
233 Ga0207691_10000278 3300025940 Bacteria 50663
234 Ga0207691_10017776 3300025940 Bacteria 6741
235 Ga0207667_10000097 3300025949 Bacteria 143270
236 Ga0207667_10000185 3300025949 Bacteria 90844
237 Ga0207651_10100473 3300025960 Bacteria 2145
238 Ga0207640_10000945 3300025981 Bacteria 16212
239 Ga0207678_10024432 3300026067 Bacteria 5276
240 Ga0207702_10001371 3300026078 Bacteria 24261
241 Ga0207702_10003748 3300026078 Bacteria 13737
242 Ga0207648_10114623 3300026089 Bacteria 2368
243 Ga0207674_10000919 3300026116 Bacteria 38320
244 Ga0207675_100087688 3300026118 Bacteria 2923
245 Ga0209974_10022155 3300027876 Bacteria 2104
246 Ga0268266_10000220 3300028379 Bacteria 99360
247 Ga0268264_10002643 3300028381 Bacteria 15652
248 Ga0307408_100036252 3300031548 Bacteria 3466
249 Ga0307408_100036576 3300031548 Bacteria 3452
250 Ga0373929_0000002 3300035085 Bacteria 683932
251 Ga0395899_0000072 3300037312 Bacteria 184393
252 Ga0395899_0006344 3300037312 Bacteria 9159
253 Ga0395899_0023037 3300037312 Bacteria 4719
254 Ga0395899_0027169 3300037312 Bacteria 4317
255 Ga0395900_0000062 3300037418 Bacteria 201968
256 Ga0395900_0008181 3300037418 Bacteria 10762
257 Ga0395900_0172871 3300037418 Bacteria 2198
258 Ga0395898_0000023 3300037466 Bacteria 379477
259 Ga0395898_0000110 3300037466 Bacteria 217100
260 Ga0395898_0006850 3300037466 Bacteria 12117
261 Ga0395898_0067953 3300037466 Bacteria 3449
262 Ga0395905_0003031 3300037471 Bacteria 18199
263 Ga0395901_0008198 3300038443 Bacteria 10557
264 Ga0395901_0025126 3300038443 Bacteria 6115
265 Ga0395901_0198609 3300038443 Bacteria 2102
266 Ga0436361_0753842 3300039447 Bacteria 1902
267 Ga0439447_000555 3300041407 Bacteria 13839
268 Ga0439448_0018492 3300042005 Bacteria 2137
269 Ga0466969_0011761 3300044656 Bacteria 4629
270 Ga0466969_0011773 3300044656 Bacteria 4626
271 Ga0466982_0000011 3300044672 Bacteria 175513
272 Ga0453683_0002829 3300044673 Bacteria 13175
273 Ga0466965_0001073 3300044683 Bacteria 10625
274 Ga0466966_0001918 3300044684 Bacteria 13480
275 Ga0466966_0003301 3300044684 Bacteria 10637
276 Ga0466966_0031390 3300044684 Bacteria 3445
277 Ga0466961_0003207 3300044693 Bacteria 10179
278 Ga0466961_0010335 3300044693 Bacteria 5951
279 Ga0466961_0042275 3300044693 Bacteria 2921
280 Ga0466971_0001866 3300044719 Bacteria 8963
281 Ga0466971_0002305 3300044719 Bacteria 8084
282 Ga0466971_0005856 3300044719 Bacteria 5352
283 Ga0466971_0041250 3300044719 Bacteria 2073
284 Ga0466970_0000557 3300044765 Bacteria 18205
285 Ga0466970_0012432 3300044765 Bacteria 4351
286 Ga0466957_0040657 3300044842 Bacteria 2809
287 Ga0466959_0001081 3300045049 Bacteria 16302
288 Ga0466959_0008936 3300045049 Bacteria 7109
289 Ga0451576_0038264 3300045051 Bacteria 5076
290 Ga0451576_0097431 3300045051 Bacteria 3058
291 Ga0466958_0005779 3300045836 Bacteria 6687
292 Ga0466958_0019060 3300045836 Bacteria 3990
293 Ga0466967_0104637 3300045976 Bacteria 2592
294 Ga0495638_0000200 3300046460 Bacteria 85703
295 Ga0495638_0000315 3300046460 Bacteria 62494
296 Ga0495638_0001936 3300046460 Bacteria 17761
297 Ga0495638_0019528 3300046460 Bacteria 4484
298 Ga0495650_0000767 3300046471 Bacteria 39743
299 Ga0495606_0001413 3300046507 Bacteria 32280
300 Ga0495586_0016633 3300046535 Bacteria 3911
301 Ga0495598_0001909 3300046537 Bacteria 4215
302 Ga0495656_0015362 3300046615 Bacteria 2888
303 Ga0495668_0000500 3300046616 Bacteria 48965
304 Ga0495670_0021873 3300046691 Bacteria 3156
305 Ga0495649_0000573 3300046694 Bacteria 31036
306 Ga0495636_0002305 3300047318 Bacteria 7330
307 Ga0495672_0000327 3300047320 Bacteria 62456
308 Ga0496105_0002441 3300048908 Bacteria 13451
309 Ga0496112_0003304 3300048915 Bacteria 13311
310 Ga0496113_0011599 3300048916 Bacteria 5889
311 Ga0496115_0000640 3300048918 Bacteria 26298
312 Ga0496115_0004837 3300048918 Bacteria 9772
313 Ga0496115_0020887 3300048918 Bacteria 5053
314 Ga0496116_0048617 3300048919 Bacteria 2845
315 Ga0496117_0006136 3300048920 Bacteria 12290
316 Ga0496117_0076423 3300048920 Bacteria 2220
317 Ga0496118_0002493 3300048921 Bacteria 24680
318 Ga0496118_0008330 3300048921 Bacteria 10739
319 Ga0496119_0000776 3300048922 Bacteria 42684
320 Ga0496119_0000923 3300048922 Bacteria 38005
321 Ga0496120_0000874 3300048923 Bacteria 42572
322 Ga0496121_0000745 3300048924 Bacteria 59829
323 Ga0496121_0004047 3300048924 Bacteria 20141
324 Ga0496121_0021456 3300048924 Bacteria 6323
325 Ga0496125_0000648 3300048928 Bacteria 58106
326 Ga0496126_0017885 3300048929 Bacteria 7053
327 Ga0496126_0020053 3300048929 Bacteria 6565
328 Ga0496126_0068525 3300048929 Bacteria 3167
329 Ga0495682_0002242 3300049460 Bacteria 9307
330 Ga0501033_0042652 3300049570 Bacteria 3381
331 Ga0501034_0032990 3300049571 Bacteria 5258
332 Ga0501034_0192644 3300049571 Bacteria 2000
333 Ga0501036_0079091 3300049572 Bacteria 2782
334 Ga0501041_0016443 3300049577 Bacteria 4398
335 Ga0501043_0019005 3300049579 Bacteria 5394
336 Ga0501043_0019927 3300049579 Bacteria 5266
337 Ga0501047_0079925 3300049581 Bacteria 3143
338 Ga0501047_0196806 3300049581 Bacteria 1877
339 Ga0501068_0037009 3300049584 Bacteria 2921
340 Ga0501071_0001889 3300049587 Bacteria 12450
341 Ga0501075_0000664 3300049591 Bacteria 21158
342 Ga0501080_0019635 3300049742 Bacteria 6260
343 nmdc:mga05p37_111031_c1 3300050507 Bacteria 3372
344 nmdc:mga05p37_63666_c1 3300050507 Bacteria 4538
345 nmdc:mga0a205_108386_c1 3300050515 Bacteria 2676
346 nmdc:mga0a205_9981_c1 3300050515 Bacteria 8712
347 Ga0500568_0003476 3300053139 Bacteria 8760
348 Ga0501084_0061286 3300054114 Bacteria 3150
349 Ga0501082_0001620 3300060353 Bacteria 19816
350 Ga0466962_0008354 3300061719 Bacteria 4961
351 Ga0466962_0022251 3300061719 Bacteria 3045

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049581 Ga0501047_0196806 Ga0501047_0196806_399_1865 488
2 iso_pu_bacteria 2939611941 2939615352 509
3 3300005441 Ga0070700_100006896 Ga0070700_1000068963 556
4 3300005577 Ga0068857_100043361 Ga0068857_1000433612 556
5 3300005719 Ga0068861_100047723 Ga0068861_1000477231 556
6 3300005334 Ga0068869_100101462 Ga0068869_1001014621 561
7 3300005719 Ga0068861_100051498 Ga0068861_1000514982 561
8 3300006195 Ga0075366_10003933 Ga0075366_100039334 561
9 3300026118 Ga0207675_100087688 Ga0207675_1000876883 561
10 3300054114 Ga0501084_0061286 Ga0501084_0061286_1345_3039 561
11 3300025938 Ga0207704_10079479 Ga0207704_100794791 562
12 3300005564 Ga0070664_100071459 Ga0070664_1000714592 564
13 3300025925 Ga0207650_10037387 Ga0207650_100373872 564
14 3300009177 Ga0105248_10079335 Ga0105248_100793352 565
15 3300025292 Ga0209676_1001312 Ga0209676_100131211 565
16 3300005618 Ga0068864_100073314 Ga0068864_1000733141 566
17 3300025940 Ga0207691_10017776 Ga0207691_100177768 566
18 3300046535 Ga0495586_0016633 Ga0495586_0016633_1979_3694 566
19 3300005364 Ga0070673_100020066 Ga0070673_1000200664 567
20 3300006871 Ga0075434_100043478 Ga0075434_1000434783 567
21 3300025303 Ga0209051_1007950 Ga0209051_10079502 567
22 3300027876 Ga0209974_10022155 Ga0209974_100221552 567
23 3300049579 Ga0501043_0019005 Ga0501043_0019005_1812_3668 567
24 3300050507 nmdc:mga05p37_111031_c1 nmdc:mga05p37_111031_c1_328_2046 567
25 3300053139 Ga0500568_0003476 Ga0500568_0003476_102_1910 567
26 3300013308 Ga0157375_10083997 Ga0157375_100839973 568
27 3300037312 Ga0395899_0006344 Ga0395899_0006344_6773_8560 568
28 3300037418 Ga0395900_0172871 Ga0395900_0172871_240_2051 568
29 3300037471 Ga0395905_0003031 Ga0395905_0003031_10127_11938 568
30 3300038443 Ga0395901_0025126 Ga0395901_0025126_3562_5373 568
31 3300045051 Ga0451576_0097431 Ga0451576_0097431_1305_3026 568
32 3300015689 Ga0183360_10003 Ga0183360_10003515 569
33 3300031548 Ga0307408_100036252 Ga0307408_1000362522 569
34 3300005366 Ga0070659_100068950 Ga0070659_1000689502 570
35 3300005543 Ga0070672_100001386 Ga0070672_1000013866 570
36 3300013307 Ga0157372_10139405 Ga0157372_101394052 570
37 3300025923 Ga0207681_10047317 Ga0207681_100473172 570
38 3300025940 Ga0207691_10000278 Ga0207691_1000027835 570
39 3300039447 Ga0436361_0753842 Ga0436361_0753842_162_1883 570
40 3300046537 Ga0495598_0001909 Ga0495598_0001909_1077_2906 570
41 3300048924 Ga0496121_0021456 Ga0496121_0021456_4197_6071 570
42 3300003775 Ga0055524_1007940 Ga0055524_10079402 571
43 3300003791 Ga0055530_10001611 Ga0055530_100016117 571
44 3300003794 Ga0055531_10017683 Ga0055531_100176832 571
45 3300005353 Ga0070669_100000046 Ga0070669_10000004642 571
46 3300005548 Ga0070665_100043096 Ga0070665_1000430962 571
47 3300006195 Ga0075366_10059415 Ga0075366_100594151 571
48 3300025273 Ga0209673_1002138 Ga0209673_10021383 571
49 3300025304 Ga0209257_1003092 Ga0209257_10030926 571
50 3300025304 Ga0209257_1005647 Ga0209257_10056478 571
51 3300025923 Ga0207681_10000080 Ga0207681_1000008019 571
52 3300026089 Ga0207648_10114623 Ga0207648_101146231 571
53 3300003771 Ga0055526_1000003 Ga0055526_1000003321 572
54 3300003773 Ga0055537_1000153 Ga0055537_10001537 572
55 3300003775 Ga0055524_1000002 Ga0055524_100000245 572
56 3300003784 Ga0055534_1000050 Ga0055534_100005037 572
57 3300003790 Ga0055528_1000001 Ga0055528_100000145 572
58 3300025263 Ga0209565_1000002 Ga0209565_1000002533 572
59 3300025273 Ga0209673_1000002 Ga0209673_1000002533 572
60 3300025291 Ga0209675_1000002 Ga0209675_1000002533 572
61 3300025295 Ga0209564_1000004 Ga0209564_1000004534 572
62 3300025299 Ga0209256_1000004 Ga0209256_1000004534 572
63 3300005544 Ga0070686_100048285 Ga0070686_1000482852 573
64 3300005549 Ga0070704_100124238 Ga0070704_1001242381 573
65 3300025960 Ga0207651_10100473 Ga0207651_101004731 573
66 3300037466 Ga0395898_0000023 Ga0395898_0000023_8020_9807 573
67 3300003761 Ga0055535_1001036 Ga0055535_10010367 574
68 3300003762 Ga0055542_1001030 Ga0055542_100103013 574
69 3300005466 Ga0070685_10031081 Ga0070685_100310812 574
70 3300005548 Ga0070665_100000137 Ga0070665_10000013726 574
71 3300025228 Ga0209672_101375 Ga0209672_1013757 574
72 3300025242 Ga0209258_100820 Ga0209258_10082013 574
73 3300025254 Ga0209148_1001026 Ga0209148_100102613 574
74 3300025272 Ga0209455_1009889 Ga0209455_10098892 574
75 3300028379 Ga0268266_10000220 Ga0268266_1000022010 574
76 3300041407 Ga0439447_000555 Ga0439447_000555_8644_10509 574
77 3300044693 Ga0466961_0010335 Ga0466961_0010335_3527_5299 574
78 3300045976 Ga0466967_0104637 Ga0466967_0104637_679_2451 574
79 3300046616 Ga0495668_0000500 Ga0495668_0000500_24836_26713 574
80 3300006844 Ga0075428_100005767 Ga0075428_1000057676 575
81 3300035085 Ga0373929_0000002 Ga0373929_0000002_134202_136019 577
82 3300005354 Ga0070675_100018252 Ga0070675_1000182522 578
83 3300025295 Ga0209564_1007409 Ga0209564_10074092 578
84 3300025299 Ga0209256_1001771 Ga0209256_100177113 578
85 3300025304 Ga0209257_1000965 Ga0209257_100096512 578
86 3300048915 Ga0496112_0003304 Ga0496112_0003304_7513_9273 578
87 3300005617 Ga0068859_100030054 Ga0068859_1000300542 579
88 3300006931 Ga0097620_100030054 Ga0097620_1000300542 579
89 3300046460 Ga0495638_0001936 Ga0495638_0001936_1608_3383 579
90 3300050515 nmdc:mga0a205_108386_c1 nmdc:mga0a205_108386_c1_398_2260 579
91 3300005536 Ga0070697_100002994 Ga0070697_1000029942 580
92 3300021361 Ga0213872_10001537 Ga0213872_1000153714 580
93 3300044673 Ga0453683_0002829 Ga0453683_0002829_6155_7957 580
94 3300045051 Ga0451576_0038264 Ga0451576_0038264_1927_3729 580
95 3300049584 Ga0501068_0037009 Ga0501068_0037009_915_2726 581
96 3300049591 Ga0501075_0000664 Ga0501075_0000664_17404_19215 581
97 3300003320 rootH2_10105433 rootH2_101054334 583
98 3300005347 Ga0070668_100019428 Ga0070668_1000194282 583
99 3300005455 Ga0070663_100013876 Ga0070663_1000138762 583
100 3300026067 Ga0207678_10024432 Ga0207678_100244322 583
101 3300031548 Ga0307408_100036576 Ga0307408_1000365762 583
102 3300046460 Ga0495638_0019528 Ga0495638_0019528_1775_3559 583
103 3300049742 Ga0501080_0019635 Ga0501080_0019635_3461_5272 583
104 3300060353 Ga0501082_0001620 Ga0501082_0001620_854_2665 583
105 3300025294 Ga0209025_1024911 Ga0209025_10249112 584
106 3300025304 Ga0209257_1000474 Ga0209257_100047446 584
107 3300025907 Ga0207645_10024406 Ga0207645_100244062 584
108 3300047320 Ga0495672_0000327 Ga0495672_0000327_4780_6564 584
109 3300049572 Ga0501036_0079091 Ga0501036_0079091_874_2679 584
110 iso_pu_bacteria 2884411467 2884415984 584
111 iso_pu_bacteria 2928963466 2928966065 584
112 3300005843 Ga0068860_100011283 Ga0068860_1000112833 585
113 3300006844 Ga0075428_100062488 Ga0075428_1000624883 585
114 3300013104 Ga0157370_10070755 Ga0157370_100707552 585
115 3300028381 Ga0268264_10002643 Ga0268264_100026435 585
116 iso_pu_bacteria 2739367700 2739729756 585
117 3300003775 Ga0055524_1018208 Ga0055524_10182082 586
118 3300003781 Ga0055536_1007170 Ga0055536_10071701 586
119 3300003794 Ga0055531_10022397 Ga0055531_100223971 586
120 3300005262 Ga0065165_1002207 Ga0065165_10022072 586
121 3300005844 Ga0068862_100062894 Ga0068862_1000628942 586
122 3300006844 Ga0075428_100012925 Ga0075428_1000129251 586
123 3300006844 Ga0075428_100116072 Ga0075428_1001160722 586
124 3300006846 Ga0075430_100022186 Ga0075430_1000221863 586
125 3300009101 Ga0105247_10048374 Ga0105247_100483742 586
126 3300009147 Ga0114129_10019488 Ga0114129_100194883 586
127 3300014326 Ga0157380_10004832 Ga0157380_100048322 586
128 3300025273 Ga0209673_1004359 Ga0209673_10043592 586
129 3300025292 Ga0209676_1002699 Ga0209676_100269912 586
130 3300025292 Ga0209676_1003466 Ga0209676_10034665 586
131 3300025298 Ga0209050_1003661 Ga0209050_10036612 586
132 3300025299 Ga0209256_1001661 Ga0209256_10016619 586
133 3300025304 Ga0209257_1002299 Ga0209257_10022995 586
134 3300049577 Ga0501041_0016443 Ga0501041_0016443_1328_3127 586
135 3300049587 Ga0501071_0001889 Ga0501071_0001889_20_1819 586
136 3300050507 nmdc:mga05p37_63666_c1 nmdc:mga05p37_63666_c1_205_2043 586
137 3300003794 Ga0055531_10015873 Ga0055531_100158732 587
138 3300025284 Ga0209130_1003267 Ga0209130_10032671 587
139 3300025292 Ga0209676_1001993 Ga0209676_10019933 587
140 3300025294 Ga0209025_1001633 Ga0209025_100163314 587
141 3300025298 Ga0209050_1008293 Ga0209050_10082935 587
142 3300025304 Ga0209257_1000080 Ga0209257_1000080232 587
143 3300025304 Ga0209257_1000751 Ga0209257_100075124 587
144 3300046615 Ga0495656_0015362 Ga0495656_0015362_125_1930 587
145 3300046691 Ga0495670_0021873 Ga0495670_0021873_1096_2901 587
146 3300047318 Ga0495636_0002305 Ga0495636_0002305_342_2147 587
147 iso_pu_bacteria 8003014200 8003017834 587
148 3300001989 JGI24739J22299_10020471 JGI24739J22299_100204712 588
149 3300002067 JGI24735J21928_10002380 JGI24735J21928_100023806 588
150 3300002705 JGI25156J39149_1003440 JGI25156J39149_10034403 588
151 3300002705 JGI25156J39149_1009810 JGI25156J39149_10098102 588
152 3300002737 JGI25162J39368_1000392 JGI25162J39368_100039231 588
153 3300002737 JGI25162J39368_1002730 JGI25162J39368_10027305 588
154 3300002741 JGI25157J39369_1000223 JGI25157J39369_100022316 588
155 3300002741 JGI25157J39369_1000511 JGI25157J39369_10005113 588
156 3300002771 JGI25163J39215_1000336 JGI25163J39215_10003369 588
157 3300002772 JGI25164J39214_1000174 JGI25164J39214_100017435 588
158 3300003214 JGI25165J46597_1000063 JGI25165J46597_100006335 588
159 3300003751 Ga0055538_1001170 Ga0055538_10011705 588
160 3300003756 Ga0055533_1001001 Ga0055533_10010013 588
161 3300003759 Ga0055525_1000148 Ga0055525_100014839 588
162 3300003759 Ga0055525_1000270 Ga0055525_100027039 588
163 3300003760 Ga0055527_1000171 Ga0055527_100017110 588
164 3300003760 Ga0055527_1000225 Ga0055527_10002259 588
165 3300003761 Ga0055535_1000304 Ga0055535_100030416 588
166 3300003761 Ga0055535_1000327 Ga0055535_100032710 588
167 3300003761 Ga0055535_1000479 Ga0055535_100047936 588
168 3300003762 Ga0055542_1000354 Ga0055542_100035410 588
169 3300003762 Ga0055542_1000472 Ga0055542_100047230 588
170 3300003762 Ga0055542_1000484 Ga0055542_100048431 588
171 3300003762 Ga0055542_1000494 Ga0055542_100049436 588
172 3300003763 Ga0055529_1000262 Ga0055529_100026235 588
173 3300003763 Ga0055529_1000381 Ga0055529_100038110 588
174 3300003763 Ga0055529_1000631 Ga0055529_10006317 588
175 3300005340 Ga0070689_100001673 Ga0070689_1000016737 588
176 3300005344 Ga0070661_100024383 Ga0070661_1000243833 588
177 3300005614 Ga0068856_100007303 Ga0068856_1000073039 588
178 3300005844 Ga0068862_100080397 Ga0068862_1000803972 588
179 3300013306 Ga0163162_10074921 Ga0163162_100749212 588
180 3300014969 Ga0157376_10036493 Ga0157376_100364932 588
181 3300015687 Ga0183368_1002 Ga0183368_1002871 588
182 3300025207 Ga0209760_100147 Ga0209760_10014711 588
183 3300025224 Ga0209784_100042 Ga0209784_10004243 588
184 3300025226 Ga0209674_100014 Ga0209674_100014592 588
185 3300025226 Ga0209674_100279 Ga0209674_10027935 588
186 3300025228 Ga0209672_100004 Ga0209672_100004931 588
187 3300025228 Ga0209672_100022 Ga0209672_10002250 588
188 3300025228 Ga0209672_101917 Ga0209672_1019175 588
189 3300025230 Ga0209563_100132 Ga0209563_10013267 588
190 3300025231 Ga0207427_100128 Ga0207427_10012843 588
191 3300025231 Ga0207427_101847 Ga0207427_1018476 588
192 3300025233 Ga0209437_100074 Ga0209437_100074116 588
193 3300025233 Ga0209437_100162 Ga0209437_100162106 588
194 3300025242 Ga0209258_100003 Ga0209258_100003931 588
195 3300025242 Ga0209258_100004 Ga0209258_100004330 588
196 3300025242 Ga0209258_100127 Ga0209258_100127116 588
197 3300025242 Ga0209258_100769 Ga0209258_1007699 588
198 3300025246 Ga0209646_1002685 Ga0209646_10026852 588
199 3300025250 Ga0209026_1000072 Ga0209026_1000072152 588
200 3300025250 Ga0209026_1000186 Ga0209026_100018646 588
201 3300025250 Ga0209026_1003121 Ga0209026_10031211 588
202 3300025254 Ga0209148_1000005 Ga0209148_10000051507 588
203 3300025254 Ga0209148_1000025 Ga0209148_1000025235 588
204 3300025254 Ga0209148_1000036 Ga0209148_1000036117 588
205 3300025254 Ga0209148_1000053 Ga0209148_100005375 588
206 3300025256 Ga0209759_1000510 Ga0209759_100051033 588
207 3300025256 Ga0209759_1000642 Ga0209759_10006423 588
208 3300025261 Ga0209233_1000040 Ga0209233_1000040115 588
209 3300025272 Ga0209455_1000004 Ga0209455_1000004931 588
210 3300025272 Ga0209455_1000007 Ga0209455_100000775 588
211 3300025272 Ga0209455_1000071 Ga0209455_1000071116 588
212 3300025904 Ga0207647_10011286 Ga0207647_100112864 588
213 3300025924 Ga0207694_10025378 Ga0207694_100253785 588
214 3300025936 Ga0207670_10001535 Ga0207670_1000153511 588
215 3300026078 Ga0207702_10001371 Ga0207702_1000137113 588
216 3300026078 Ga0207702_10003748 Ga0207702_100037483 588
217 3300037312 Ga0395899_0000072 Ga0395899_0000072_39503_41272 588
218 3300037418 Ga0395900_0000062 Ga0395900_0000062_161523_163292 588
219 3300037466 Ga0395898_0000110 Ga0395898_0000110_42930_44699 588
220 3300038443 Ga0395901_0198609 Ga0395901_0198609_304_2073 588
221 3300044656 Ga0466969_0011761 Ga0466969_0011761_1457_3226 588
222 3300044656 Ga0466969_0011773 Ga0466969_0011773_1401_3170 588
223 3300044684 Ga0466966_0003301 Ga0466966_0003301_2245_4086 588
224 3300044693 Ga0466961_0003207 Ga0466961_0003207_4695_6464 588
225 3300044719 Ga0466971_0041250 Ga0466971_0041250_99_1940 588
226 3300044765 Ga0466970_0000557 Ga0466970_0000557_11995_13764 588
227 3300046460 Ga0495638_0000315 Ga0495638_0000315_25905_27671 588
228 3300046471 Ga0495650_0000767 Ga0495650_0000767_3116_4882 588
229 3300048916 Ga0496113_0011599 Ga0496113_0011599_3003_4772 588
230 3300048918 Ga0496115_0004837 Ga0496115_0004837_6356_8125 588
231 3300048929 Ga0496126_0068525 Ga0496126_0068525_366_2132 588
232 3300006852 Ga0075433_10030775 Ga0075433_100307753 589
233 3300013100 Ga0157373_10064998 Ga0157373_100649982 589
234 3300025228 Ga0209672_100435 Ga0209672_10043525 589
235 3300037312 Ga0395899_0023037 Ga0395899_0023037_2033_3802 589
236 3300037418 Ga0395900_0008181 Ga0395900_0008181_2127_3896 589
237 3300044683 Ga0466965_0001073 Ga0466965_0001073_7897_9669 589
238 3300044684 Ga0466966_0031390 Ga0466966_0031390_629_2401 589
239 3300044693 Ga0466961_0042275 Ga0466961_0042275_426_2198 589
240 3300044719 Ga0466971_0001866 Ga0466971_0001866_5274_7046 589
241 3300044719 Ga0466971_0005856 Ga0466971_0005856_428_2200 589
242 3300044842 Ga0466957_0040657 Ga0466957_0040657_742_2514 589
243 3300045049 Ga0466959_0001081 Ga0466959_0001081_11583_13355 589
244 3300045049 Ga0466959_0008936 Ga0466959_0008936_4782_6554 589
245 3300045836 Ga0466958_0005779 Ga0466958_0005779_615_2387 589
246 3300045836 Ga0466958_0019060 Ga0466958_0019060_2006_3778 589
247 3300046460 Ga0495638_0000200 Ga0495638_0000200_35498_37270 589
248 3300046507 Ga0495606_0001413 Ga0495606_0001413_28807_30579 589
249 3300046694 Ga0495649_0000573 Ga0495649_0000573_8332_10104 589
250 3300048918 Ga0496115_0000640 Ga0496115_0000640_5698_7470 589
251 3300049460 Ga0495682_0002242 Ga0495682_0002242_1398_3170 589
252 3300049571 Ga0501034_0032990 Ga0501034_0032990_3320_5104 589
253 3300050515 nmdc:mga0a205_9981_c1 nmdc:mga0a205_9981_c1_1539_3359 589
254 3300061719 Ga0466962_0008354 Ga0466962_0008354_3141_4913 589
255 3300002737 JGI25162J39368_1000457 JGI25162J39368_100045711 590
256 3300002772 JGI25164J39214_1000336 JGI25164J39214_100033634 590
257 3300003214 JGI25165J46597_1002367 JGI25165J46597_10023675 590
258 3300003320 rootH2_10036585 rootH2_100365852 590
259 3300005435 Ga0070714_100000073 Ga0070714_10000007343 590
260 3300005457 Ga0070662_100018901 Ga0070662_1000189013 590
261 3300005539 Ga0068853_100053368 Ga0068853_1000533683 590
262 3300005563 Ga0068855_100005171 Ga0068855_1000051719 590
263 3300005578 Ga0068854_100001149 Ga0068854_1000011499 590
264 3300006028 Ga0070717_10000035 Ga0070717_1000003542 590
265 3300009545 Ga0105237_10032571 Ga0105237_100325715 590
266 3300009551 Ga0105238_10074244 Ga0105238_100742442 590
267 3300010375 Ga0105239_10062403 Ga0105239_100624033 590
268 3300014497 Ga0182008_10012680 Ga0182008_100126803 590
269 3300025231 Ga0207427_100101 Ga0207427_10010186 590
270 3300025233 Ga0209437_100090 Ga0209437_100090191 590
271 3300025261 Ga0209233_1000077 Ga0209233_1000077288 590
272 3300025904 Ga0207647_10000639 Ga0207647_100006397 590
273 3300025909 Ga0207705_10009200 Ga0207705_100092004 590
274 3300025919 Ga0207657_10008003 Ga0207657_1000800310 590
275 3300025924 Ga0207694_10105977 Ga0207694_101059772 590
276 3300025929 Ga0207664_10000041 Ga0207664_1000004194 590
277 3300025932 Ga0207690_10000169 Ga0207690_1000016949 590
278 3300025933 Ga0207706_10054534 Ga0207706_100545344 590
279 3300025949 Ga0207667_10000097 Ga0207667_1000009785 590
280 3300025981 Ga0207640_10000945 Ga0207640_100009459 590
281 3300037466 Ga0395898_0006850 Ga0395898_0006850_1467_3239 590
282 3300037466 Ga0395898_0067953 Ga0395898_0067953_372_2144 590
283 3300038443 Ga0395901_0008198 Ga0395901_0008198_363_2135 590
284 3300001979 JGI24740J21852_10016547 JGI24740J21852_100165471 591
285 3300001989 JGI24739J22299_10010617 JGI24739J22299_100106172 591
286 3300002705 JGI25156J39149_1000788 JGI25156J39149_100078810 591
287 3300002737 JGI25162J39368_1001258 JGI25162J39368_100125811 591
288 3300002741 JGI25157J39369_1000195 JGI25157J39369_10001959 591
289 3300002772 JGI25164J39214_1000024 JGI25164J39214_100002410 591
290 3300003214 JGI25165J46597_1000394 JGI25165J46597_100039438 591
291 3300003316 rootH1_10048142 rootH1_100481424 591
292 3300003316 rootH1_10101531 rootH1_101015316 591
293 3300003322 rootL2_10094700 rootL2_100947003 591
294 3300003578 Ga0006562J51391_1112987 Ga0006562J51391_11129872 591
295 3300003578 Ga0006562J51391_1112988 Ga0006562J51391_111298813 591
296 3300003761 Ga0055535_1001072 Ga0055535_10010728 591
297 3300003762 Ga0055542_1001359 Ga0055542_10013594 591
298 3300003763 Ga0055529_1000387 Ga0055529_100038710 591
299 3300005458 Ga0070681_10110247 Ga0070681_101102471 591
300 3300005563 Ga0068855_100011125 Ga0068855_1000111255 591
301 3300005577 Ga0068857_100026426 Ga0068857_1000264265 591
302 3300005834 Ga0068851_10003142 Ga0068851_100031427 591
303 3300009093 Ga0105240_10000241 Ga0105240_1000024151 591
304 3300009093 Ga0105240_10000756 Ga0105240_1000075638 591
305 3300009545 Ga0105237_10000401 Ga0105237_1000040124 591
306 3300010375 Ga0105239_10010650 Ga0105239_1001065010 591
307 3300010375 Ga0105239_10023983 Ga0105239_100239833 591
308 3300013105 Ga0157369_10159088 Ga0157369_101590882 591
309 3300013307 Ga0157372_10011460 Ga0157372_100114602 591
310 3300025228 Ga0209672_100168 Ga0209672_10016850 591
311 3300025231 Ga0207427_100058 Ga0207427_100058184 591
312 3300025233 Ga0209437_100142 Ga0209437_1001429 591
313 3300025242 Ga0209258_100307 Ga0209258_10030739 591
314 3300025246 Ga0209646_1000431 Ga0209646_100043120 591
315 3300025250 Ga0209026_1000568 Ga0209026_100056818 591
316 3300025254 Ga0209148_1000371 Ga0209148_10003718 591
317 3300025256 Ga0209759_1001237 Ga0209759_10012377 591
318 3300025258 Ga0209129_1002265 Ga0209129_100226510 591
319 3300025261 Ga0209233_1000141 Ga0209233_1000141184 591
320 3300025272 Ga0209455_1000040 Ga0209455_1000040370 591
321 3300025297 Ga0209758_1000247 Ga0209758_100024760 591
322 3300025321 Ga0207656_10003315 Ga0207656_100033155 591
323 3300025904 Ga0207647_10005187 Ga0207647_100051876 591
324 3300025912 Ga0207707_10057259 Ga0207707_100572591 591
325 3300025913 Ga0207695_10000442 Ga0207695_1000044231 591
326 3300025913 Ga0207695_10000443 Ga0207695_1000044339 591
327 3300025913 Ga0207695_10000800 Ga0207695_1000080052 591
328 3300025914 Ga0207671_10000037 Ga0207671_1000003771 591
329 3300025949 Ga0207667_10000185 Ga0207667_1000018534 591
330 3300026116 Ga0207674_10000919 Ga0207674_1000091913 591
331 3300037312 Ga0395899_0027169 Ga0395899_0027169_1071_2846 591
332 3300042005 Ga0439448_0018492 Ga0439448_0018492_299_2074 591
333 3300044672 Ga0466982_0000011 Ga0466982_0000011_114657_116432 591
334 3300044684 Ga0466966_0001918 Ga0466966_0001918_1189_2964 591
335 3300044719 Ga0466971_0002305 Ga0466971_0002305_655_2430 591
336 3300044765 Ga0466970_0012432 Ga0466970_0012432_1882_3657 591
337 3300048908 Ga0496105_0002441 Ga0496105_0002441_3118_4896 591
338 3300048918 Ga0496115_0020887 Ga0496115_0020887_160_1938 591
339 3300048919 Ga0496116_0048617 Ga0496116_0048617_949_2727 591
340 3300048920 Ga0496117_0006136 Ga0496117_0006136_3246_5024 591
341 3300048920 Ga0496117_0076423 Ga0496117_0076423_224_2002 591
342 3300048921 Ga0496118_0002493 Ga0496118_0002493_722_2500 591
343 3300048921 Ga0496118_0008330 Ga0496118_0008330_5716_7494 591
344 3300048922 Ga0496119_0000776 Ga0496119_0000776_3205_4983 591
345 3300048922 Ga0496119_0000923 Ga0496119_0000923_3059_4837 591
346 3300048923 Ga0496120_0000874 Ga0496120_0000874_3205_4983 591
347 3300048924 Ga0496121_0000745 Ga0496121_0000745_21249_23027 591
348 3300048924 Ga0496121_0004047 Ga0496121_0004047_16557_18332 591
349 3300048928 Ga0496125_0000648 Ga0496125_0000648_45410_47185 591
350 3300048929 Ga0496126_0017885 Ga0496126_0017885_5231_7009 591
351 3300048929 Ga0496126_0020053 Ga0496126_0020053_3118_4896 591
352 3300049570 Ga0501033_0042652 Ga0501033_0042652_528_2303 591
353 3300049571 Ga0501034_0192644 Ga0501034_0192644_51_1826 591
354 3300049579 Ga0501043_0019927 Ga0501043_0019927_273_2048 591
355 3300049581 Ga0501047_0079925 Ga0501047_0079925_952_2727 591
356 3300061719 Ga0466962_0022251 Ga0466962_0022251_275_2050 591

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

83

611

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.7964 32 586
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.7662 27 586
3u24-assembly1.cif.gz_A the structure of a putative lipoprotein of unknown function from shewanella oneidensis. 0.7583 25 580
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.7576 32 586
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.7573 31 578
ID Description Score Start End Superfamily
5lb7B00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.927 69 119 1.20.58.80
af_A0A1D6NFE4_361_439_1.20.58.80 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.9177 69 117 1.20.58.80
af_Q9WV86_1_78_1.20.58.80 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.9076 69 119 1.20.58.80
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.7911 60 579 1.10.1370.30
4wzxA01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.7358 30 119 1.20.58.80
ID Description Score Start End GO Terms
AF-A0A091AXC9-F1-model_v4 DUF885 domain-containing protein 0.9908 23 590
AF-A0A1Q4FQV8-F1-model_v4 DUF885 domain-containing protein 0.9893 27 588
AF-A0A1E4K9F6-F1-model_v4 DUF885 domain-containing protein 0.9874 23 588
AF-A0A7W4BVE5-F1-model_v4 DUF885 domain-containing protein 0.9865 23 586
AF-A0A3D1AYB1-F1-model_v4 DUF885 domain-containing protein 0.9848 23 588

Feature Viewer

pLDDT pTM Quality
92.55 0.89 High
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Predicted Structure (AlphaFold2)

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