F419950

General Info

Members Datasets Scaffolds Average Seq Length
354 214 320 289

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2585428182|2588207941
Length 298
Sequence IFLTLKNEKKIKRAVSEFNTELKLKGFRAFQIEQDGNETRVYSRKEFYKICLTTGKSKIHYSDKSFEQEGTVLFFGNPHIPYSWETISTTYKGYTILFSEEFFKNSERSESLQQSSFFKIGGTPVLKITEEQRQFLNTIFQKIIAEQESDYVYKDELIRNYISLIIHESLKLEPAEDFDQNKNAASRLSSVFLELLERQFPIETTHQSLQLKSAQDFAKNLNVHVNYLNRTIKEVTGKSTTAHITERILTEAKALLQHTDWNISEMAFALGFDYPTYFNNFFKKQTGANPKAFRLTEV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
4 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
5 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
6 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
7 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
8 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
9 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
10 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
11 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
12 2738543023 Pedobacter sp. OK628 Isolate Unclassified
13 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
14 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
15 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
16 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
17 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
18 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
19 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
20 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
21 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
22 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
23 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
24 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
25 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
26 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
27 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
28 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
29 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
30 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
31 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
32 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
33 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
34 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
35 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
36 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
37 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
38 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
39 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
40 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
41 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
44 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
45 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
46 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
47 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
48 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
49 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
50 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
51 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
52 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
53 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
54 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
55 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
56 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
57 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
58 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
59 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
60 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
61 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
62 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
63 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
64 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
65 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
66 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
67 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
68 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
69 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
70 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
71 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
72 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
73 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
74 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
75 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
76 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
77 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
78 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
79 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
80 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
81 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
82 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
83 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
84 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
85 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
86 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
87 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
88 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
89 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
90 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
91 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
92 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
93 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
94 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
95 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
96 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
97 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
98 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
99 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
100 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
101 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
102 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
103 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
104 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
105 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
106 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
107 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
108 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
109 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
111 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
112 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
142 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
144 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
145 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
146 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
147 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
148 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
149 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
150 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
151 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
152 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
153 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
154 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
155 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
156 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
157 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
158 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
159 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
160 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
161 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
162 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
163 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
164 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
165 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
166 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
167 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
168 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
169 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
170 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
171 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
172 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
173 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
174 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
175 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
176 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
177 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
178 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
179 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
180 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
181 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
182 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
185 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
186 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
187 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
188 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
189 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
190 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
191 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
192 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
193 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
194 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
195 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
196 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
197 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
198 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
199 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
200 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
201 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
202 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
203 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
204 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
205 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
206 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
207 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
208 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
209 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
210 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
211 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
212 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
213 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
214 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.4
Metatranscriptomes 0
Isolates 9.6

Biome Distribution

Category Percentage (%)
Aerial Root 0.56
Bulb 0
Endosphere 5.37
Nodule 0.56
Rhizoplane 0.56
Rhizosphere 81.36
Stem 0
Stem Tuber 0
Unclassified 11.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1382251 2162886007 Bacteria 1790
2 MRS1b_contig_718694 2162886011 Unclassified 1388
3 JGI24740J21852_10003055 3300001979 Bacteria 7401
4 JGI24739J22299_10057258 3300001989 Bacteria 1241
5 JGI24735J21928_10000002 3300002067 Bacteria 624895
6 JGI25154J39366_1000073 3300002738 Bacteria 92928
7 rootH1_10055678 3300003316 Bacteria 19068
8 rootH1_10120336 3300003316 Bacteria 3301
9 rootH1_10121111 3300003316 Bacteria 3208
10 rootH2_10025779 3300003320 Bacteria 23337
11 rootH2_10242480 3300003320 Unclassified 1208
12 rootH2_10271356 3300003320 Bacteria 1325
13 rootL2_10156854 3300003322 Bacteria 3220
14 rootH1_10056865 3300003323 Bacteria 14713
15 Ga0055542_1005177 3300003762 Bacteria 2996
16 Ga0055534_1005231 3300003784 Bacteria 3531
17 Ga0065714_10002207 3300005288 Bacteria 86097
18 Ga0065714_10004788 3300005288 Bacteria 8946
19 Ga0065714_10079192 3300005288 Bacteria 2536
20 Ga0065714_10080514 3300005288 Bacteria 2435
21 Ga0065704_10000199 3300005289 Bacteria 297176
22 Ga0065704_10072765 3300005289 Bacteria 8042
23 Ga0065704_10076744 3300005289 Bacteria 4993
24 Ga0065704_10078064 3300005289 Bacteria 4537
25 Ga0065704_10091636 3300005289 Bacteria 2704
26 Ga0065712_10070401 3300005290 Bacteria 6045
27 Ga0065712_10155261 3300005290 Bacteria 1329
28 Ga0065707_10241243 3300005295 Bacteria 1155
29 Ga0070683_100035062 3300005329 Bacteria 4587
30 Ga0070670_100241246 3300005331 Unclassified 1573
31 Ga0070670_100377727 3300005331 Bacteria 1248
32 Ga0070670_100638293 3300005331 Unclassified 955
33 Ga0068869_100002374 3300005334 Bacteria 11330
34 Ga0068869_100020964 3300005334 Bacteria 4491
35 Ga0070680_100236206 3300005336 Bacteria 1544
36 Ga0070682_100001009 3300005337 Bacteria 16310
37 Ga0068868_100032781 3300005338 Bacteria 3998
38 Ga0070660_100503076 3300005339 Bacteria 1008
39 Ga0070689_100003622 3300005340 Bacteria 10300
40 Ga0070689_100004849 3300005340 Bacteria 9127
41 Ga0070661_100019528 3300005344 Bacteria 4830
42 Ga0070669_100078947 3300005353 Bacteria 2447
43 Ga0070669_100150054 3300005353 Bacteria 1804
44 Ga0070675_100005674 3300005354 Bacteria 9555
45 Ga0070675_100200740 3300005354 Unclassified 1731
46 Ga0070675_100315025 3300005354 Bacteria 1381
47 Ga0070673_100509647 3300005364 Unclassified 1089
48 Ga0070688_100002757 3300005365 Bacteria 8926
49 Ga0070688_100006541 3300005365 Bacteria 6232
50 Ga0070694_100284459 3300005444 Bacteria 1262
51 Ga0070663_100024785 3300005455 Bacteria 4042
52 Ga0070663_100170096 3300005455 Bacteria 1684
53 Ga0070662_100165781 3300005457 Unclassified 1731
54 Ga0068867_100542215 3300005459 Bacteria 1006
55 Ga0070685_10002205 3300005466 Bacteria 10052
56 Ga0070685_10119281 3300005466 Bacteria 1636
57 Ga0070679_100323609 3300005530 Bacteria 1491
58 Ga0070684_100003455 3300005535 Bacteria 11856
59 Ga0070672_100063428 3300005543 Bacteria 2918
60 Ga0070686_100359722 3300005544 Bacteria 1096
61 Ga0068855_100023624 3300005563 Bacteria 7364
62 Ga0068855_100026816 3300005563 Bacteria 6893
63 Ga0068855_100307294 3300005563 Unclassified 1755
64 Ga0068855_100529799 3300005563 Bacteria 1277
65 Ga0070664_100000670 3300005564 Bacteria 26132
66 Ga0068857_100087870 3300005577 Bacteria 2781
67 Ga0068852_100500521 3300005616 Bacteria 1210
68 Ga0068859_100003995 3300005617 Bacteria 15034
69 Ga0068859_100015090 3300005617 Bacteria 7756
70 Ga0068859_100207300 3300005617 Bacteria 2046
71 Ga0068864_100000994 3300005618 Bacteria 23711
72 Ga0068861_100067024 3300005719 Bacteria 2769
73 Ga0068863_100371342 3300005841 Bacteria 1396
74 Ga0068860_100048525 3300005843 Bacteria 4047
75 Ga0068860_100066718 3300005843 Bacteria 3419
76 Ga0068860_100208345 3300005843 Unclassified 1896
77 Ga0075366_10035350 3300006195 Bacteria 2946
78 Ga0097621_100523765 3300006237 Bacteria 1076
79 Ga0068871_100000114 3300006358 Bacteria 49426
80 Ga0068871_100010739 3300006358 Bacteria 6696
81 Ga0097620_100003995 3300006931 Bacteria 15034
82 Ga0097620_100015090 3300006931 Bacteria 7756
83 Ga0097620_100207317 3300006931 Bacteria 2046
84 Ga0079104_1000005 3300006946 Bacteria 407099
85 Ga0105244_10000004 3300009036 Bacteria 492478
86 Ga0105244_10000343 3300009036 Bacteria 43808
87 Ga0105240_10427675 3300009093 Bacteria 1486
88 Ga0111539_10161988 3300009094 Bacteria 2616
89 Ga0111539_10515613 3300009094 Bacteria 1393
90 Ga0114129_10004913 3300009147 Bacteria 18871
91 Ga0105243_10008205 3300009148 Bacteria 8021
92 Ga0105243_10033659 3300009148 Unclassified 3964
93 Ga0105242_10132614 3300009176 Bacteria 2153
94 Ga0105242_10418922 3300009176 Bacteria 1254
95 Ga0105237_10002370 3300009545 Bacteria 23380
96 Ga0105237_10010276 3300009545 Bacteria 9969
97 Ga0105237_10828559 3300009545 Bacteria 932
98 Ga0105239_10051806 3300010375 Bacteria 4499
99 Ga0105239_10095125 3300010375 Bacteria 3291
100 Ga0157373_10000009 3300013100 Bacteria 201551
101 Ga0157373_10000502 3300013100 Bacteria 30851
102 Ga0157373_10016534 3300013100 Bacteria 5379
103 Ga0157371_10000258 3300013102 Bacteria 73082
104 Ga0157371_10001004 3300013102 Bacteria 31148
105 Ga0157371_10009402 3300013102 Bacteria 7697
106 Ga0157371_10018590 3300013102 Bacteria 5135
107 Ga0157371_10023559 3300013102 Bacteria 4501
108 Ga0157370_10006550 3300013104 Bacteria 12825
109 Ga0157370_10008916 3300013104 Bacteria 10777
110 Ga0157370_10013235 3300013104 Bacteria 8501
111 Ga0157370_10024013 3300013104 Bacteria 6045
112 Ga0157370_10043720 3300013104 Bacteria 4309
113 Ga0157370_10049875 3300013104 Bacteria 4003
114 Ga0157370_10133516 3300013104 Bacteria 2315
115 Ga0157370_10179571 3300013104 Bacteria 1967
116 Ga0157370_10247748 3300013104 Bacteria 1648
117 Ga0157370_10287540 3300013104 Unclassified 1519
118 Ga0157369_10000219 3300013105 Bacteria 79491
119 Ga0157369_10000961 3300013105 Bacteria 36565
120 Ga0157369_10045419 3300013105 Bacteria 4777
121 Ga0157374_10000966 3300013296 Bacteria 24956
122 Ga0157374_10535793 3300013296 Bacteria 1178
123 Ga0157378_10035499 3300013297 Bacteria 4410
124 Ga0157378_10106348 3300013297 Bacteria 2566
125 Ga0163162_10000404 3300013306 Bacteria 39585
126 Ga0163162_10007933 3300013306 Bacteria 10351
127 Ga0163162_10127625 3300013306 Bacteria 2651
128 Ga0163162_10269337 3300013306 Bacteria 1835
129 Ga0163162_10319827 3300013306 Bacteria 1684
130 Ga0163162_10399354 3300013306 Bacteria 1507
131 Ga0157372_10000070 3300013307 Bacteria 109649
132 Ga0157372_10002858 3300013307 Bacteria 18659
133 Ga0157372_10046495 3300013307 Bacteria 4818
134 Ga0157372_10053231 3300013307 Bacteria 4510
135 Ga0157375_10001677 3300013308 Bacteria 19068
136 Ga0157375_10069636 3300013308 Bacteria 3525
137 Ga0157375_10118571 3300013308 Bacteria 2753
138 Ga0157375_10248895 3300013308 Bacteria 1938
139 Ga0163163_10000836 3300014325 Bacteria 26189
140 Ga0163163_10457904 3300014325 Bacteria 1336
141 Ga0157380_10012083 3300014326 Bacteria 6250
142 Ga0157380_10016196 3300014326 Bacteria 5493
143 Ga0157380_10029430 3300014326 Bacteria 4197
144 Ga0157380_10067313 3300014326 Bacteria 2883
145 Ga0157380_10102350 3300014326 Bacteria 2388
146 Ga0157380_10367489 3300014326 Bacteria 1352
147 Ga0182008_10000028 3300014497 Bacteria 176968
148 Ga0182008_10002301 3300014497 Bacteria 12043
149 Ga0157377_10003455 3300014745 Bacteria 7157
150 Ga0157377_10008980 3300014745 Bacteria 4895
151 Ga0157379_10020089 3300014968 Bacteria 5903
152 Ga0157379_10046005 3300014968 Bacteria 3896
153 Ga0157379_10259387 3300014968 Bacteria 1579
154 Ga0157376_10006720 3300014969 Bacteria 8142
155 Ga0157376_10015031 3300014969 Bacteria 5836
156 Ga0157376_10268403 3300014969 Bacteria 1602
157 Ga0182006_1000110 3300015261 Bacteria 88392
158 Ga0182006_1017819 3300015261 Bacteria 3011
159 Ga0163161_10000012 3300017792 Bacteria 264639
160 Ga0163161_10000422 3300017792 Bacteria 35604
161 Ga0163161_10028035 3300017792 Bacteria 3997
162 Ga0209258_100193 3300025242 Bacteria 124682
163 Ga0209646_1000158 3300025246 Bacteria 92980
164 Ga0209646_1006712 3300025246 Bacteria 1920
165 Ga0209026_1000168 3300025250 Bacteria 100138
166 Ga0209148_1000167 3300025254 Bacteria 135407
167 Ga0209675_1000035 3300025291 Bacteria 255411
168 Ga0209675_1000263 3300025291 Bacteria 51088
169 Ga0207655_1000008 3300025728 Bacteria 734289
170 Ga0207655_1001003 3300025728 Bacteria 28719
171 Ga0207680_10131273 3300025903 Bacteria 1651
172 Ga0207647_10033221 3300025904 Bacteria 3304
173 Ga0207647_10116602 3300025904 Bacteria 1576
174 Ga0207645_10131948 3300025907 Bacteria 1626
175 Ga0207671_10001876 3300025914 Bacteria 23384
176 Ga0207671_10011873 3300025914 Bacteria 7047
177 Ga0207649_10137567 3300025920 Bacteria 1667
178 Ga0207681_10024385 3300025923 Bacteria 3882
179 Ga0207681_10071357 3300025923 Bacteria 2422
180 Ga0207650_10082178 3300025925 Unclassified 2445
181 Ga0207650_10380296 3300025925 Unclassified 1166
182 Ga0207650_10448357 3300025925 Bacteria 1074
183 Ga0207650_10565669 3300025925 Bacteria 954
184 Ga0207659_10073381 3300025926 Bacteria 2505
185 Ga0207659_10397659 3300025926 Bacteria 1152
186 Ga0207659_10495288 3300025926 Bacteria 1034
187 Ga0207659_10533393 3300025926 Bacteria 996
188 Ga0207706_10403616 3300025933 Unclassified 1185
189 Ga0207686_10296097 3300025934 Bacteria 1200
190 Ga0207709_10440865 3300025935 Unclassified 1004
191 Ga0207670_10002197 3300025936 Bacteria 10202
192 Ga0207670_10007771 3300025936 Bacteria 6015
193 Ga0207691_10057703 3300025940 Bacteria 3532
194 Ga0207691_10101926 3300025940 Bacteria 2561
195 Ga0207691_10131307 3300025940 Bacteria 2213
196 Ga0207691_10268765 3300025940 Bacteria 1469
197 Ga0207689_10009986 3300025942 Bacteria 8184
198 Ga0207689_10036473 3300025942 Bacteria 4081
199 Ga0207689_10116552 3300025942 Bacteria 2196
200 Ga0207689_10209002 3300025942 Bacteria 1612
201 Ga0207661_10011964 3300025944 Bacteria 6303
202 Ga0207679_10019149 3300025945 Bacteria 4595
203 Ga0207667_10049953 3300025949 Bacteria 4414
204 Ga0207667_10063651 3300025949 Bacteria 3854
205 Ga0207667_10097048 3300025949 Bacteria 3042
206 Ga0207667_10415008 3300025949 Unclassified 1370
207 Ga0207651_10016385 3300025960 Bacteria 4340
208 Ga0207651_10181093 3300025960 Bacteria 1672
209 Ga0207651_10522954 3300025960 Unclassified 1028
210 Ga0207712_10269551 3300025961 Bacteria 1384
211 Ga0207712_10625546 3300025961 Bacteria 933
212 Ga0207668_10042528 3300025972 Bacteria 3078
213 Ga0207677_10123550 3300026023 Bacteria 1952
214 Ga0207678_10039209 3300026067 Bacteria 4112
215 Ga0207678_10099161 3300026067 Bacteria 2488
216 Ga0207641_10230444 3300026088 Bacteria 1721
217 Ga0207648_10255003 3300026089 Unclassified 1564
218 Ga0207674_10003111 3300026116 Bacteria 20480
219 Ga0207674_10026709 3300026116 Bacteria 6125
220 Ga0207674_10118498 3300026116 Bacteria 2617
221 Ga0207675_100026005 3300026118 Bacteria 5448
222 Ga0209281_1000216 3300027111 Bacteria 125724
223 Ga0268264_10133729 3300028381 Bacteria 2203
224 Ga0268264_10269963 3300028381 Bacteria 1589
225 Ga0268264_10471938 3300028381 Eukaryota 1219
226 Ga0307515_10278342 3300028794 Bacteria 1384
227 Ga0316176_1118316 3300030732 Bacteria 9954
228 Ga0316183_1208293 3300030742 Bacteria 35492
229 Ga0307408_100001263 3300031548 Bacteria 18977
230 Ga0307408_100002471 3300031548 Bacteria 12958
231 Ga0307405_10000003 3300031731 Bacteria 569064
232 Ga0307410_10000266 3300031852 Bacteria 19991
233 Ga0307407_10000008 3300031903 Bacteria 191228
234 Ga0307412_10000017 3300031911 Bacteria 294698
235 Ga0307412_10000572 3300031911 Bacteria 21858
236 Ga0307416_100000009 3300032002 Bacteria 374271
237 Ga0307414_10000279 3300032004 Bacteria 30372
238 Ga0307414_10007215 3300032004 Bacteria 6237
239 Ga0307414_10029104 3300032004 Unclassified 3591
240 Ga0307414_10029391 3300032004 Bacteria 3577
241 Ga0307414_10037133 3300032004 Unclassified 3259
242 Ga0307414_10280182 3300032004 Bacteria 1400
243 Ga0307411_10069342 3300032005 Bacteria 2381
244 Ga0307510_10010767 3300033180 Bacteria 10877
245 Ga0395899_0000087 3300037312 Bacteria 157502
246 Ga0395899_0004577 3300037312 Bacteria 10779
247 Ga0395900_0060225 3300037418 Bacteria 3907
248 Ga0395900_0288966 3300037418 Bacteria 1629
249 Ga0395900_0611664 3300037418 Bacteria 1029
250 Ga0395898_0007001 3300037466 Bacteria 11983
251 Ga0395905_0006896 3300037471 Bacteria 11356
252 Ga0395905_0178786 3300037471 Bacteria 1992
253 Ga0395901_0001623 3300038443 Bacteria 23267
254 Ga0439431_0007604 3300041997 Bacteria 2420
255 Ga0439442_013190 3300042002 Bacteria 1695
256 Ga0439449_0004326 3300042007 Bacteria 5486
257 Ga0439449_0037779 3300042007 Unclassified 1796
258 Ga0439434_0008140 3300042435 Bacteria 3073
259 Ga0466969_0000179 3300044656 Bacteria 34089
260 Ga0466969_0034855 3300044656 Bacteria 2549
261 Ga0466969_0142309 3300044656 Bacteria 1108
262 Ga0466966_0000014 3300044684 Bacteria 127891
263 Ga0466966_0053484 3300044684 Bacteria 2561
264 Ga0466961_0048149 3300044693 Bacteria 2725
265 Ga0466961_0161662 3300044693 Bacteria 1396
266 Ga0466970_0240524 3300044765 Unclassified 1013
267 Ga0466959_0000011 3300045049 Bacteria 173387
268 Ga0466959_0004493 3300045049 Bacteria 9346
269 Ga0466959_0009748 3300045049 Bacteria 6842
270 Ga0466958_0087973 3300045836 Bacteria 1919
271 Ga0495627_000003 3300046453 Bacteria 704557
272 Ga0495585_0001034 3300046492 Bacteria 23127
273 Ga0495594_0144014 3300046499 Bacteria 1352
274 Ga0495596_0002153 3300046500 Bacteria 10746
275 Ga0495606_0004913 3300046507 Bacteria 13080
276 Ga0495606_0013207 3300046507 Bacteria 6551
277 Ga0495632_0004127 3300046519 Bacteria 9987
278 Ga0495643_0002808 3300046522 Bacteria 13304
279 Ga0495663_0000039 3300046525 Bacteria 68141
280 Ga0495654_0000001 3300046530 Bacteria 1513197
281 Ga0495633_0000562 3300046558 Bacteria 36317
282 Ga0495625_0001175 3300046660 Bacteria 33641
283 Ga0495625_0006572 3300046660 Bacteria 10318
284 Ga0495589_0029838 3300046794 Bacteria 2749
285 Ga0495660_0029825 3300046810 Bacteria 3076
286 Ga0495686_0002441 3300047472 Bacteria 17556
287 Ga0496110_0222871 3300048913 Bacteria 1715
288 Ga0496116_0011970 3300048919 Bacteria 7126
289 Ga0496117_0004077 3300048920 Bacteria 16401
290 Ga0496118_0027056 3300048921 Bacteria 4864
291 Ga0496121_0000008 3300048924 Bacteria 843593
292 Ga0496122_0001730 3300048925 Bacteria 33861
293 Ga0496122_0006098 3300048925 Bacteria 14037
294 Ga0496123_0009476 3300048926 Bacteria 8765
295 Ga0496123_0075918 3300048926 Bacteria 2071
296 Ga0496125_0000181 3300048928 Bacteria 138133
297 Ga0496126_0001001 3300048929 Bacteria 48107
298 Ga0496126_0043146 3300048929 Bacteria 4162
299 Ga0501223_001389 3300049663 Bacteria 5589
300 Ga0501249_000054 3300049679 Bacteria 43438
301 Ga0501219_000601 3300049703 Bacteria 5231
302 Ga0501225_0000755 3300049705 Bacteria 10139
303 Ga0501241_000006 3300049758 Bacteria 149999
304 Ga0501241_002108 3300049758 Bacteria 3891
305 Ga0501280_000492 3300049776 Bacteria 9376
306 nmdc:mga0k408_51166_c1 3300050493 Bacteria 2393
307 nmdc:mga05p37_7598_c1 3300050507 Bacteria 12789
308 nmdc:mga08y16_361846_c1 3300050511 Bacteria 1489
309 Ga0500578_0001655 3300053086 Bacteria 21459
310 Ga0500646_0010855 3300053090 Bacteria 2339
311 Ga0500651_0000148 3300053093 Bacteria 44606
312 Ga0500641_0000732 3300053096 Bacteria 11899
313 Ga0500594_0014423 3300053118 Bacteria 1892
314 Ga0500608_000292 3300053122 Bacteria 19418
315 Ga0500588_0056546 3300053146 Bacteria 1242
316 Ga0500616_0096615 3300053153 Bacteria 1452
317 Ga0500622_0000127 3300053156 Bacteria 80179
318 Ga0500584_019937 3300053726 Bacteria 3111
319 Ga0500661_007643 3300055283 Unclassified 1996
320 Ga0466962_0007942 3300061719 Bacteria 5089

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044656 Ga0466969_0142309 Ga0466969_0142309_316_1050 242
2 3300046499 Ga0495594_0144014 Ga0495594_0144014_35_778 247
3 3300003784 Ga0055534_1005231 Ga0055534_10052313 259
4 3300025291 Ga0209675_1000035 Ga0209675_1000035228 259
5 3300048929 Ga0496126_0001001 Ga0496126_0001001_19763_20641 259
6 3300009545 Ga0105237_10010276 Ga0105237_100102766 260
7 3300013104 Ga0157370_10008916 Ga0157370_100089168 260
8 3300014497 Ga0182008_10002301 Ga0182008_100023012 260
9 3300015261 Ga0182006_1000110 Ga0182006_100011066 260
10 3300017792 Ga0163161_10028035 Ga0163161_100280352 260
11 3300025914 Ga0207671_10011873 Ga0207671_100118733 260
12 3300005337 Ga0070682_100001009 Ga0070682_10000100913 264
13 3300009036 Ga0105244_10000343 Ga0105244_1000034325 264
14 3300025728 Ga0207655_1001003 Ga0207655_100100314 264
15 3300037418 Ga0395900_0611664 Ga0395900_0611664_200_1012 270
16 3300025940 Ga0207691_10101926 Ga0207691_101019262 272
17 3300005339 Ga0070660_100503076 Ga0070660_1005030761 273
18 3300005544 Ga0070686_100359722 Ga0070686_1003597221 273
19 3300005617 Ga0068859_100207300 Ga0068859_1002073003 273
20 3300005843 Ga0068860_100048525 Ga0068860_1000485253 273
21 3300006931 Ga0097620_100207317 Ga0097620_1002073173 273
22 3300013308 Ga0157375_10069636 Ga0157375_100696364 273
23 3300014968 Ga0157379_10020089 Ga0157379_100200893 273
24 3300025904 Ga0207647_10116602 Ga0207647_101166021 273
25 3300025940 Ga0207691_10057703 Ga0207691_100577033 273
26 3300026088 Ga0207641_10230444 Ga0207641_102304441 273
27 3300028381 Ga0268264_10133729 Ga0268264_101337293 273
28 3300046500 Ga0495596_0002153 Ga0495596_0002153_2397_3275 278
29 iso_pu_bacteria 2842903701 2842908959 280
30 3300046660 Ga0495625_0001175 Ga0495625_0001175_964_1842 283
31 3300005288 Ga0065714_10002207 Ga0065714_1000220744 284
32 3300005289 Ga0065704_10078064 Ga0065704_100780644 284
33 3300013104 Ga0157370_10006550 Ga0157370_100065506 284
34 3300013105 Ga0157369_10000219 Ga0157369_1000021923 284
35 3300030732 Ga0316176_1118316 Ga0316176_11183168 284
36 3300030742 Ga0316183_1208293 Ga0316183_120829326 284
37 3300046507 Ga0495606_0013207 Ga0495606_0013207_4580_5458 284
38 3300046519 Ga0495632_0004127 Ga0495632_0004127_3209_4087 284
39 3300046558 Ga0495633_0000562 Ga0495633_0000562_8559_9437 284
40 3300046660 Ga0495625_0006572 Ga0495625_0006572_7153_8031 284
41 3300046522 Ga0495643_0002808 Ga0495643_0002808_4695_5573 285
42 3300046810 Ga0495660_0029825 Ga0495660_0029825_1429_2307 285
43 3300005288 Ga0065714_10080514 Ga0065714_100805142 286
44 3300025960 Ga0207651_10181093 Ga0207651_101810931 287
45 3300045049 Ga0466959_0004493 Ga0466959_0004493_681_1550 287
46 3300048924 Ga0496121_0000008 Ga0496121_0000008_359798_360664 287
47 3300061719 Ga0466962_0007942 Ga0466962_0007942_2910_3779 287
48 iso_pu_bacteria 2513020052 2513235159 288
49 iso_pu_bacteria 2582581873 2585425565 288
50 iso_pu_bacteria 2585428182 2588209723 288
51 iso_pu_bacteria 2585428187 2588234082 288
52 iso_pu_bacteria 2599185184 2599478445 288
53 iso_pu_bacteria 2721755487 2722727869 288
54 iso_pu_bacteria 2738541279 2738732265 288
55 iso_pu_bacteria 2738541285 2738764830 288
56 iso_pu_bacteria 2738543007 2739213845 288
57 iso_pu_bacteria 2738543023 2739301361 288
58 iso_pu_bacteria 2751185877 2753671098 288
59 iso_pu_bacteria 2816332188 2816873839 288
60 iso_pu_bacteria 2818991442 2819577589 288
61 iso_pu_bacteria 2842722452 2842724963 288
62 iso_pu_bacteria 2842909656 2842914127 288
63 iso_pu_bacteria 2889290771 2889290918 288
64 iso_pu_bacteria 2928078545 2928080503 288
65 iso_pu_bacteria 2928147474 2928150691 288
66 iso_pu_bacteria 2929150217 2929153460 288
67 iso_pu_bacteria 2929177148 2929180601 288
68 iso_pu_bacteria 2929239360 2929241946 288
69 iso_pu_bacteria 2929921140 2929922741 288
70 iso_pu_bacteria 2932082852 2932083158 288
71 iso_pu_bacteria 2945924605 2945926618 288
72 iso_pu_bacteria 2945977869 2945982999 288
73 iso_pu_bacteria 2946013367 2946017605 288
74 iso_pu_bacteria 2954016120 2954018806 288
75 iso_pu_bacteria 2984572630 2984575690 288
76 iso_pu_bacteria 2984606641 2984609145 288
77 iso_pu_bacteria 2993372514 2993373896 288
78 iso_pu_bacteria 8055419101 8055421822 288
79 3300003762 Ga0055542_1005177 Ga0055542_10051774 289
80 3300025242 Ga0209258_100193 Ga0209258_10019385 289
81 3300025246 Ga0209646_1006712 Ga0209646_10067123 289
82 3300025254 Ga0209148_1000167 Ga0209148_100016731 289
83 3300005336 Ga0070680_100236206 Ga0070680_1002362061 290
84 3300005530 Ga0070679_100323609 Ga0070679_1003236092 290
85 3300005563 Ga0068855_100026816 Ga0068855_1000268163 290
86 3300013102 Ga0157371_10009402 Ga0157371_100094022 290
87 3300013104 Ga0157370_10043720 Ga0157370_100437201 290
88 3300025949 Ga0207667_10049953 Ga0207667_100499535 290
89 3300037312 Ga0395899_0004577 Ga0395899_0004577_9182_10054 290
90 3300037418 Ga0395900_0060225 Ga0395900_0060225_339_1211 290
91 3300037466 Ga0395898_0007001 Ga0395898_0007001_3192_4064 290
92 3300037471 Ga0395905_0178786 Ga0395905_0178786_342_1214 290
93 3300038443 Ga0395901_0001623 Ga0395901_0001623_15530_16402 290
94 3300049679 Ga0501249_000054 Ga0501249_000054_10810_11682 290
95 2162886011 MRS1b_contig_718694 MRS1b_0522.00003000 291
96 3300003320 rootH2_10242480 rootH2_102424801 291
97 3300005290 Ga0065712_10070401 Ga0065712_100704013 291
98 3300005334 Ga0068869_100020964 Ga0068869_1000209642 291
99 3300005340 Ga0070689_100004849 Ga0070689_1000048492 291
100 3300005353 Ga0070669_100078947 Ga0070669_1000789473 291
101 3300005354 Ga0070675_100005674 Ga0070675_10000567411 291
102 3300005365 Ga0070688_100002757 Ga0070688_1000027579 291
103 3300005466 Ga0070685_10002205 Ga0070685_100022054 291
104 3300005617 Ga0068859_100015090 Ga0068859_10001509010 291
105 3300006237 Ga0097621_100523765 Ga0097621_1005237651 291
106 3300006358 Ga0068871_100010739 Ga0068871_1000107394 291
107 3300006931 Ga0097620_100015090 Ga0097620_10001509010 291
108 3300013296 Ga0157374_10535793 Ga0157374_105357931 291
109 3300013297 Ga0157378_10106348 Ga0157378_101063482 291
110 3300013306 Ga0163162_10319827 Ga0163162_103198272 291
111 3300013308 Ga0157375_10118571 Ga0157375_101185713 291
112 3300014326 Ga0157380_10012083 Ga0157380_100120834 291
113 3300014745 Ga0157377_10003455 Ga0157377_100034554 291
114 3300014969 Ga0157376_10015031 Ga0157376_100150315 291
115 3300025923 Ga0207681_10024385 Ga0207681_100243852 291
116 3300025926 Ga0207659_10073381 Ga0207659_100733813 291
117 3300025926 Ga0207659_10397659 Ga0207659_103976591 291
118 3300025936 Ga0207670_10002197 Ga0207670_100021974 291
119 3300025942 Ga0207689_10209002 Ga0207689_102090022 291
120 3300028794 Ga0307515_10278342 Ga0307515_102783421 291
121 3300031548 Ga0307408_100001263 Ga0307408_10000126318 291
122 3300037418 Ga0395900_0288966 Ga0395900_0288966_608_1483 291
123 3300049663 Ga0501223_001389 Ga0501223_001389_99_974 291
124 2162886007 SwRhRL2b_contig_1382251 SwRhRL2b_0320.00002600 292
125 3300001979 JGI24740J21852_10003055 JGI24740J21852_100030552 292
126 3300001989 JGI24739J22299_10057258 JGI24739J22299_100572581 292
127 3300002067 JGI24735J21928_10000002 JGI24735J21928_10000002507 292
128 3300002738 JGI25154J39366_1000073 JGI25154J39366_100007350 292
129 3300003316 rootH1_10055678 rootH1_100556781 292
130 3300003316 rootH1_10120336 rootH1_101203361 292
131 3300003316 rootH1_10121111 rootH1_101211113 292
132 3300003320 rootH2_10025779 rootH2_1002577921 292
133 3300003320 rootH2_10271356 rootH2_102713562 292
134 3300003322 rootL2_10156854 rootL2_101568541 292
135 3300003323 rootH1_10056865 rootH1_1005686520 292
136 3300005288 Ga0065714_10004788 Ga0065714_100047885 292
137 3300005288 Ga0065714_10079192 Ga0065714_100791924 292
138 3300005289 Ga0065704_10000199 Ga0065704_1000019927 292
139 3300005289 Ga0065704_10072765 Ga0065704_100727653 292
140 3300005289 Ga0065704_10076744 Ga0065704_100767443 292
141 3300005289 Ga0065704_10091636 Ga0065704_100916361 292
142 3300005290 Ga0065712_10155261 Ga0065712_101552611 292
143 3300005295 Ga0065707_10241243 Ga0065707_102412431 292
144 3300005329 Ga0070683_100035062 Ga0070683_1000350625 292
145 3300005331 Ga0070670_100241246 Ga0070670_1002412462 292
146 3300005331 Ga0070670_100377727 Ga0070670_1003777272 292
147 3300005331 Ga0070670_100638293 Ga0070670_1006382931 292
148 3300005334 Ga0068869_100002374 Ga0068869_10000237414 292
149 3300005338 Ga0068868_100032781 Ga0068868_1000327811 292
150 3300005340 Ga0070689_100003622 Ga0070689_1000036229 292
151 3300005344 Ga0070661_100019528 Ga0070661_1000195285 292
152 3300005353 Ga0070669_100150054 Ga0070669_1001500543 292
153 3300005354 Ga0070675_100200740 Ga0070675_1002007402 292
154 3300005354 Ga0070675_100315025 Ga0070675_1003150251 292
155 3300005364 Ga0070673_100509647 Ga0070673_1005096472 292
156 3300005365 Ga0070688_100006541 Ga0070688_1000065412 292
157 3300005444 Ga0070694_100284459 Ga0070694_1002844591 292
158 3300005455 Ga0070663_100024785 Ga0070663_1000247853 292
159 3300005455 Ga0070663_100170096 Ga0070663_1001700961 292
160 3300005457 Ga0070662_100165781 Ga0070662_1001657812 292
161 3300005459 Ga0068867_100542215 Ga0068867_1005422151 292
162 3300005466 Ga0070685_10119281 Ga0070685_101192811 292
163 3300005535 Ga0070684_100003455 Ga0070684_10000345513 292
164 3300005543 Ga0070672_100063428 Ga0070672_1000634282 292
165 3300005563 Ga0068855_100023624 Ga0068855_1000236244 292
166 3300005563 Ga0068855_100307294 Ga0068855_1003072942 292
167 3300005563 Ga0068855_100529799 Ga0068855_1005297991 292
168 3300005564 Ga0070664_100000670 Ga0070664_10000067027 292
169 3300005577 Ga0068857_100087870 Ga0068857_1000878706 292
170 3300005616 Ga0068852_100500521 Ga0068852_1005005211 292
171 3300005617 Ga0068859_100003995 Ga0068859_10000399512 292
172 3300005618 Ga0068864_100000994 Ga0068864_1000009943 292
173 3300005719 Ga0068861_100067024 Ga0068861_1000670241 292
174 3300005841 Ga0068863_100371342 Ga0068863_1003713421 292
175 3300005843 Ga0068860_100066718 Ga0068860_1000667184 292
176 3300005843 Ga0068860_100208345 Ga0068860_1002083452 292
177 3300006195 Ga0075366_10035350 Ga0075366_100353502 292
178 3300006358 Ga0068871_100000114 Ga0068871_10000011454 292
179 3300006931 Ga0097620_100003995 Ga0097620_10000399512 292
180 3300006946 Ga0079104_1000005 Ga0079104_1000005213 292
181 3300009036 Ga0105244_10000004 Ga0105244_1000000473 292
182 3300009093 Ga0105240_10427675 Ga0105240_104276751 292
183 3300009094 Ga0111539_10161988 Ga0111539_101619881 292
184 3300009094 Ga0111539_10515613 Ga0111539_105156131 292
185 3300009147 Ga0114129_10004913 Ga0114129_100049138 292
186 3300009148 Ga0105243_10008205 Ga0105243_100082057 292
187 3300009148 Ga0105243_10033659 Ga0105243_100336591 292
188 3300009176 Ga0105242_10132614 Ga0105242_101326142 292
189 3300009176 Ga0105242_10418922 Ga0105242_104189222 292
190 3300009545 Ga0105237_10002370 Ga0105237_100023709 292
191 3300009545 Ga0105237_10828559 Ga0105237_108285591 292
192 3300010375 Ga0105239_10051806 Ga0105239_100518064 292
193 3300010375 Ga0105239_10095125 Ga0105239_100951256 292
194 3300013100 Ga0157373_10000009 Ga0157373_10000009139 292
195 3300013100 Ga0157373_10000502 Ga0157373_1000050221 292
196 3300013100 Ga0157373_10016534 Ga0157373_100165343 292
197 3300013102 Ga0157371_10000258 Ga0157371_1000025821 292
198 3300013102 Ga0157371_10001004 Ga0157371_1000100432 292
199 3300013102 Ga0157371_10018590 Ga0157371_100185907 292
200 3300013102 Ga0157371_10023559 Ga0157371_100235595 292
201 3300013104 Ga0157370_10013235 Ga0157370_100132356 292
202 3300013104 Ga0157370_10024013 Ga0157370_100240132 292
203 3300013104 Ga0157370_10049875 Ga0157370_100498755 292
204 3300013104 Ga0157370_10133516 Ga0157370_101335163 292
205 3300013104 Ga0157370_10179571 Ga0157370_101795712 292
206 3300013104 Ga0157370_10247748 Ga0157370_102477481 292
207 3300013104 Ga0157370_10287540 Ga0157370_102875402 292
208 3300013105 Ga0157369_10000961 Ga0157369_1000096117 292
209 3300013105 Ga0157369_10045419 Ga0157369_100454196 292
210 3300013296 Ga0157374_10000966 Ga0157374_100009661 292
211 3300013297 Ga0157378_10035499 Ga0157378_100354993 292
212 3300013306 Ga0163162_10000404 Ga0163162_100004049 292
213 3300013306 Ga0163162_10007933 Ga0163162_100079337 292
214 3300013306 Ga0163162_10127625 Ga0163162_101276253 292
215 3300013306 Ga0163162_10269337 Ga0163162_102693371 292
216 3300013306 Ga0163162_10399354 Ga0163162_103993541 292
217 3300013307 Ga0157372_10000070 Ga0157372_1000007026 292
218 3300013307 Ga0157372_10002858 Ga0157372_1000285816 292
219 3300013307 Ga0157372_10046495 Ga0157372_100464954 292
220 3300013307 Ga0157372_10053231 Ga0157372_100532312 292
221 3300013308 Ga0157375_10001677 Ga0157375_100016778 292
222 3300013308 Ga0157375_10248895 Ga0157375_102488951 292
223 3300014325 Ga0163163_10000836 Ga0163163_100008361 292
224 3300014325 Ga0163163_10457904 Ga0163163_104579041 292
225 3300014326 Ga0157380_10016196 Ga0157380_100161962 292
226 3300014326 Ga0157380_10029430 Ga0157380_100294303 292
227 3300014326 Ga0157380_10067313 Ga0157380_100673133 292
228 3300014326 Ga0157380_10102350 Ga0157380_101023503 292
229 3300014326 Ga0157380_10367489 Ga0157380_103674892 292
230 3300014497 Ga0182008_10000028 Ga0182008_1000002857 292
231 3300014745 Ga0157377_10008980 Ga0157377_100089803 292
232 3300014968 Ga0157379_10046005 Ga0157379_100460051 292
233 3300014968 Ga0157379_10259387 Ga0157379_102593871 292
234 3300014969 Ga0157376_10006720 Ga0157376_100067204 292
235 3300014969 Ga0157376_10268403 Ga0157376_102684032 292
236 3300015261 Ga0182006_1017819 Ga0182006_10178194 292
237 3300017792 Ga0163161_10000012 Ga0163161_10000012244 292
238 3300017792 Ga0163161_10000422 Ga0163161_1000042212 292
239 3300025246 Ga0209646_1000158 Ga0209646_100015833 292
240 3300025250 Ga0209026_1000168 Ga0209026_10001684 292
241 3300025291 Ga0209675_1000263 Ga0209675_100026328 292
242 3300025728 Ga0207655_1000008 Ga0207655_1000008515 292
243 3300025903 Ga0207680_10131273 Ga0207680_101312732 292
244 3300025904 Ga0207647_10033221 Ga0207647_100332212 292
245 3300025907 Ga0207645_10131948 Ga0207645_101319482 292
246 3300025914 Ga0207671_10001876 Ga0207671_1000187612 292
247 3300025920 Ga0207649_10137567 Ga0207649_101375671 292
248 3300025923 Ga0207681_10071357 Ga0207681_100713571 292
249 3300025925 Ga0207650_10082178 Ga0207650_100821782 292
250 3300025925 Ga0207650_10380296 Ga0207650_103802961 292
251 3300025925 Ga0207650_10448357 Ga0207650_104483571 292
252 3300025925 Ga0207650_10565669 Ga0207650_105656691 292
253 3300025926 Ga0207659_10495288 Ga0207659_104952881 292
254 3300025926 Ga0207659_10533393 Ga0207659_105333931 292
255 3300025933 Ga0207706_10403616 Ga0207706_104036161 292
256 3300025934 Ga0207686_10296097 Ga0207686_102960972 292
257 3300025935 Ga0207709_10440865 Ga0207709_104408651 292
258 3300025936 Ga0207670_10007771 Ga0207670_100077713 292
259 3300025940 Ga0207691_10131307 Ga0207691_101313072 292
260 3300025940 Ga0207691_10268765 Ga0207691_102687652 292
261 3300025942 Ga0207689_10009986 Ga0207689_1000998611 292
262 3300025942 Ga0207689_10036473 Ga0207689_100364736 292
263 3300025942 Ga0207689_10116552 Ga0207689_101165522 292
264 3300025944 Ga0207661_10011964 Ga0207661_100119643 292
265 3300025945 Ga0207679_10019149 Ga0207679_100191496 292
266 3300025949 Ga0207667_10063651 Ga0207667_100636517 292
267 3300025949 Ga0207667_10097048 Ga0207667_100970484 292
268 3300025949 Ga0207667_10415008 Ga0207667_104150082 292
269 3300025960 Ga0207651_10016385 Ga0207651_100163854 292
270 3300025960 Ga0207651_10522954 Ga0207651_105229541 292
271 3300025961 Ga0207712_10269551 Ga0207712_102695512 292
272 3300025961 Ga0207712_10625546 Ga0207712_106255461 292
273 3300025972 Ga0207668_10042528 Ga0207668_100425282 292
274 3300026023 Ga0207677_10123550 Ga0207677_101235503 292
275 3300026067 Ga0207678_10039209 Ga0207678_100392091 292
276 3300026067 Ga0207678_10099161 Ga0207678_100991611 292
277 3300026089 Ga0207648_10255003 Ga0207648_102550032 292
278 3300026116 Ga0207674_10003111 Ga0207674_1000311115 292
279 3300026116 Ga0207674_10026709 Ga0207674_100267097 292
280 3300026116 Ga0207674_10118498 Ga0207674_101184983 292
281 3300026118 Ga0207675_100026005 Ga0207675_1000260057 292
282 3300027111 Ga0209281_1000216 Ga0209281_10002163 292
283 3300028381 Ga0268264_10269963 Ga0268264_102699632 292
284 3300028381 Ga0268264_10471938 Ga0268264_104719381 292
285 3300031548 Ga0307408_100002471 Ga0307408_1000024714 292
286 3300031731 Ga0307405_10000003 Ga0307405_1000000310 292
287 3300031852 Ga0307410_10000266 Ga0307410_100002666 292
288 3300031903 Ga0307407_10000008 Ga0307407_10000008153 292
289 3300031911 Ga0307412_10000017 Ga0307412_10000017103 292
290 3300031911 Ga0307412_10000572 Ga0307412_1000057213 292
291 3300032002 Ga0307416_100000009 Ga0307416_10000000942 292
292 3300032004 Ga0307414_10000279 Ga0307414_1000027917 292
293 3300032004 Ga0307414_10007215 Ga0307414_100072153 292
294 3300032004 Ga0307414_10029104 Ga0307414_100291044 292
295 3300032004 Ga0307414_10029391 Ga0307414_100293915 292
296 3300032004 Ga0307414_10037133 Ga0307414_100371333 292
297 3300032004 Ga0307414_10280182 Ga0307414_102801822 292
298 3300032005 Ga0307411_10069342 Ga0307411_100693422 292
299 3300033180 Ga0307510_10010767 Ga0307510_100107674 292
300 3300037312 Ga0395899_0000087 Ga0395899_0000087_116151_117029 292
301 3300037471 Ga0395905_0006896 Ga0395905_0006896_5931_6809 292
302 3300041997 Ga0439431_0007604 Ga0439431_0007604_1142_2020 292
303 3300042002 Ga0439442_013190 Ga0439442_013190_726_1604 292
304 3300042007 Ga0439449_0004326 Ga0439449_0004326_4104_4982 292
305 3300042007 Ga0439449_0037779 Ga0439449_0037779_26_904 292
306 3300042435 Ga0439434_0008140 Ga0439434_0008140_279_1157 292
307 3300044656 Ga0466969_0000179 Ga0466969_0000179_1175_2053 292
308 3300044656 Ga0466969_0034855 Ga0466969_0034855_358_1236 292
309 3300044684 Ga0466966_0000014 Ga0466966_0000014_120626_121504 292
310 3300044684 Ga0466966_0053484 Ga0466966_0053484_1465_2343 292
311 3300044693 Ga0466961_0048149 Ga0466961_0048149_227_1105 292
312 3300044693 Ga0466961_0161662 Ga0466961_0161662_166_1044 292
313 3300044765 Ga0466970_0240524 Ga0466970_0240524_45_923 292
314 3300045049 Ga0466959_0000011 Ga0466959_0000011_31825_32703 292
315 3300045049 Ga0466959_0009748 Ga0466959_0009748_4250_5128 292
316 3300045836 Ga0466958_0087973 Ga0466958_0087973_765_1643 292
317 3300046453 Ga0495627_000003 Ga0495627_000003_695287_696165 292
318 3300046492 Ga0495585_0001034 Ga0495585_0001034_8644_9522 292
319 3300046507 Ga0495606_0004913 Ga0495606_0004913_8649_9527 292
320 3300046525 Ga0495663_0000039 Ga0495663_0000039_53866_54744 292
321 3300046530 Ga0495654_0000001 Ga0495654_0000001_463641_464519 292
322 3300046794 Ga0495589_0029838 Ga0495589_0029838_1177_2055 292
323 3300047472 Ga0495686_0002441 Ga0495686_0002441_12814_13692 292
324 3300048913 Ga0496110_0222871 Ga0496110_0222871_36_914 292
325 3300048919 Ga0496116_0011970 Ga0496116_0011970_3494_4372 292
326 3300048920 Ga0496117_0004077 Ga0496117_0004077_3338_4216 292
327 3300048921 Ga0496118_0027056 Ga0496118_0027056_3065_3943 292
328 3300048925 Ga0496122_0001730 Ga0496122_0001730_26895_27773 292
329 3300048925 Ga0496122_0006098 Ga0496122_0006098_5492_6370 292
330 3300048926 Ga0496123_0009476 Ga0496123_0009476_3572_4450 292
331 3300048926 Ga0496123_0075918 Ga0496123_0075918_163_1041 292
332 3300048928 Ga0496125_0000181 Ga0496125_0000181_27145_28023 292
333 3300048929 Ga0496126_0043146 Ga0496126_0043146_656_1534 292
334 3300049703 Ga0501219_000601 Ga0501219_000601_652_1530 292
335 3300049705 Ga0501225_0000755 Ga0501225_0000755_7685_8563 292
336 3300049758 Ga0501241_000006 Ga0501241_000006_104885_105763 292
337 3300049758 Ga0501241_002108 Ga0501241_002108_1006_1884 292
338 3300049776 Ga0501280_000492 Ga0501280_000492_5486_6364 292
339 3300050493 nmdc:mga0k408_51166_c1 nmdc:mga0k408_51166_c1_1195_2073 292
340 3300050507 nmdc:mga05p37_7598_c1 nmdc:mga05p37_7598_c1_8454_9332 292
341 3300050511 nmdc:mga08y16_361846_c1 nmdc:mga08y16_361846_c1_461_1339 292
342 3300053086 Ga0500578_0001655 Ga0500578_0001655_18512_19390 292
343 3300053090 Ga0500646_0010855 Ga0500646_0010855_1131_2009 292
344 3300053093 Ga0500651_0000148 Ga0500651_0000148_10531_11409 292
345 3300053096 Ga0500641_0000732 Ga0500641_0000732_4957_5835 292
346 3300053118 Ga0500594_0014423 Ga0500594_0014423_500_1378 292
347 3300053122 Ga0500608_000292 Ga0500608_000292_4591_5469 292
348 3300053146 Ga0500588_0056546 Ga0500588_0056546_300_1178 292
349 3300053153 Ga0500616_0096615 Ga0500616_0096615_430_1308 292
350 3300053156 Ga0500622_0000127 Ga0500622_0000127_36054_36932 292
351 3300053726 Ga0500584_019937 Ga0500584_019937_2025_2903 292
352 3300055283 Ga0500661_007643 Ga0500661_007643_563_1441 292
353 iso_pu_bacteria 2585428182 2588207941 292
354 iso_pu_bacteria 2816332188 2816873274 292

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

217

296

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1bl0-assembly1.cif.gz_A multiple antibiotic resistance protein (mara)/dna complex 0.8754 181 290
3lsg-assembly2.cif.gz_D the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.852 180 279
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8431 180 289
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8377 180 283
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8358 180 289
ID Description Score Start End Superfamily
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.946 241 284 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9054 240 284 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.899 246 289 1.10.10.60
3lsgB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8935 245 289 1.10.10.60
3lsgC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8701 246 289 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A5R8MH57-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9016 182 284 GO:0003700
GO:0043565
AF-A0A699M4B6-F1-model_v4 deleted 0.893 21 168
AF-A0A0J1NBP3-F1-model_v4 Multiple antibiotic resistance protein MarA 0.8827 174 284 GO:0003700
GO:0043565
GO:0046677
AF-A0A061PBG8-F1-model_v4 Transcriptional regulator, AraC family 0.8786 182 284 GO:0003700
GO:0043565
AF-A0A839BL91-F1-model_v4 deleted 0.8752 179 284

Feature Viewer

pLDDT pTM Quality
80.95 0.62 Medium
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Predicted Structure (AlphaFold2)

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Map