F419465

General Info

Members Datasets Scaffolds Average Seq Length
353 164 706 438

Family's Representative Sequence

Representative Sequence 3300038996|Ga0242420_004517|Ga0242420_004517_11_1525
Length 504
Sequence VPKNLPDTPAVNHLAVHTEDHPLEYASFKGEIAQGEYGGGLMLIWDRGTYEELKWQMGPRGKQEVQVLLHGEGRTSNRVGNGSRDHMPVLAQGGSAFIPLLVYRTGAYAPSGIPIANGMSDYLTLVNERDGGVNGVKIAWEECETQYDTKQGVECYERLKGKNALLVNPYSTGITYQLIPKAPVDKVVVFSMGYGMAAAADGRWFPWVFGFPTTYWSQASAVVRYIGAQEGGLEKLKGKKIAHIYHNSPYGKEANPTLEVLAKKYGFDLNLLAVDHPGQEQKSTWLQVRRLNPDWIFMSGWGVMNQVAVKEAAAIGFKMDHFIGNWWSANDSDVVPAGDGARGYKGATFHAPGTSFKVHADIVKFVYDKGKGAGKKDAMGEPLYNRGVVNSMFAVEAIRTAMGKFGNKSLSSEEVRWGFENLNLTDQRLEQLGMKGFTHAVKVSCEDHEGNGPVLIQQWDGKKWSIVSDWVQPMREVVRPMIEEAAIAEGKNLKYAMRDCSKEK

Samples

Sample ID Description Type Environment
1 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
2 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
99 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
107 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
111 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
153 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
157 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
158 2643221569 Achromobacter sp. Root565 Isolate Unclassified
159 2643221594 Achromobacter sp. Root170 Isolate Unclassified
160 2643221621 Achromobacter sp. Root83 Isolate Unclassified
161 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
162 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
163 2858950400 Achromobacter sp. K91 Isolate Unclassified
164 2941479691

Type Distribution

Type Percentage (%)
Metagenomes 97.45
Metatranscriptomes 0.28
Isolates 2.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.83
Nodule 0
Rhizoplane 0.85
Rhizosphere 90.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0242420_004517 3300038996 Bacteria 2109
2 Ga0058861_11966689 3300004800 Bacteria 1479
3 Ga0065704_10077991 3300005289 Bacteria 4559
4 Ga0065707_10095085 3300005295 Bacteria 3420
5 Ga0070683_100026969 3300005329 Bacteria 5178
6 Ga0070680_100013244 3300005336 Bacteria 6421
7 Ga0070680_100059035 3300005336 Bacteria 3138
8 Ga0070660_100185886 3300005339 Bacteria 1682
9 Ga0070692_10029740 3300005345 Bacteria 2726
10 Ga0070669_100052976 3300005353 Bacteria 2970
11 Ga0070703_10008427 3300005406 Bacteria 2898
12 Ga0070713_100122048 3300005436 Bacteria 2287
13 Ga0070701_10003378 3300005438 Bacteria 6304
14 Ga0070705_100005055 3300005440 Bacteria 6419
15 Ga0070700_100034456 3300005441 Bacteria 3059
16 Ga0070708_100000402 3300005445 Bacteria 32565
17 Ga0070708_100011325 3300005445 Bacteria 7252
18 Ga0070708_100052495 3300005445 Bacteria 3615
19 Ga0070708_100123593 3300005445 Bacteria 2390
20 Ga0070708_100158474 3300005445 Bacteria 2108
21 Ga0070708_100180213 3300005445 Bacteria 1974
22 Ga0070708_100245463 3300005445 Bacteria 1681
23 Ga0070708_100324009 3300005445 Bacteria 1451
24 Ga0070678_100020347 3300005456 Bacteria 4352
25 Ga0070706_100000113 3300005467 Bacteria 98415
26 Ga0070706_100001137 3300005467 Bacteria 28677
27 Ga0070706_100007724 3300005467 Bacteria 10059
28 Ga0070706_100027679 3300005467 Bacteria 5215
29 Ga0070706_100046588 3300005467 Bacteria 4002
30 Ga0070706_100120429 3300005467 Bacteria 2446
31 Ga0070706_100120647 3300005467 Bacteria 2444
32 Ga0070707_100005204 3300005468 Bacteria 12175
33 Ga0070707_100006962 3300005468 Bacteria 10481
34 Ga0070707_100009756 3300005468 Bacteria 8925
35 Ga0070707_100033901 3300005468 Bacteria 4869
36 Ga0070707_100067745 3300005468 Bacteria 3434
37 Ga0070707_100079232 3300005468 Bacteria 3170
38 Ga0070698_100010154 3300005471 Bacteria 10059
39 Ga0070698_100015305 3300005471 Bacteria 8110
40 Ga0070698_100066021 3300005471 Bacteria 3643
41 Ga0070698_100135649 3300005471 Bacteria 2415
42 Ga0070698_100294267 3300005471 Bacteria 1554
43 Ga0070699_100000945 3300005518 Bacteria 27089
44 Ga0070699_100014195 3300005518 Bacteria 6854
45 Ga0070699_100016827 3300005518 Bacteria 6277
46 Ga0070699_100193891 3300005518 Bacteria 1805
47 Ga0070699_100200906 3300005518 Bacteria 1772
48 Ga0070699_100287505 3300005518 Bacteria 1473
49 Ga0070697_100000582 3300005536 Bacteria 27575
50 Ga0070697_100005517 3300005536 Bacteria 9751
51 Ga0070697_100010446 3300005536 Bacteria 7246
52 Ga0070697_100015409 3300005536 Bacteria 6001
53 Ga0070697_100081299 3300005536 Bacteria 2670
54 Ga0070697_100085308 3300005536 Bacteria 2605
55 Ga0070672_100030104 3300005543 Bacteria 4075
56 Ga0070696_100038481 3300005546 Bacteria 3301
57 Ga0070665_100056749 3300005548 Bacteria 3926
58 Ga0068855_100107736 3300005563 Bacteria 3201
59 Ga0068857_100024652 3300005577 Bacteria 5297
60 Ga0068856_100027965 3300005614 Bacteria 5502
61 Ga0068859_100112841 3300005617 Bacteria 2782
62 Ga0068861_100044694 3300005719 Bacteria 3331
63 Ga0068861_100280281 3300005719 Bacteria 1435
64 Ga0068870_10023669 3300005840 Bacteria 3032
65 Ga0068863_100061459 3300005841 Bacteria 3552
66 Ga0068860_100017284 3300005843 Bacteria 7028
67 Ga0081540_1013196 3300005983 Bacteria 5388
68 Ga0081540_1083869 3300005983 Bacteria 1424
69 Ga0081539_10000009 3300005985 Bacteria 509286
70 Ga0081539_10017586 3300005985 Bacteria 5010
71 Ga0075365_10024343 3300006038 Bacteria 3817
72 Ga0075364_10000449 3300006051 Bacteria 20713
73 Ga0075364_10019391 3300006051 Bacteria 4268
74 Ga0075364_10147717 3300006051 Bacteria 1583
75 Ga0070712_100012699 3300006175 Bacteria 5361
76 Ga0075369_10047281 3300006186 Bacteria 1855
77 Ga0068871_100285103 3300006358 Bacteria 1446
78 Ga0075428_100008321 3300006844 Bacteria 11495
79 Ga0075428_100124358 3300006844 Bacteria 2807
80 Ga0075428_100171907 3300006844 Bacteria 2348
81 Ga0075430_100000036 3300006846 Bacteria 68655
82 Ga0075430_100105073 3300006846 Bacteria 2357
83 Ga0075430_100126602 3300006846 Bacteria 2129
84 Ga0075431_100000441 3300006847 Bacteria 33990
85 Ga0075431_100009225 3300006847 Bacteria 9901
86 Ga0075431_100050412 3300006847 Bacteria 4292
87 Ga0075431_100102704 3300006847 Bacteria 2951
88 Ga0075431_100162983 3300006847 Bacteria 2292
89 Ga0075431_100208750 3300006847 Bacteria 1996
90 Ga0075433_10015282 3300006852 Bacteria 6292
91 Ga0075433_10024305 3300006852 Bacteria 5112
92 Ga0075433_10079356 3300006852 Bacteria 2892
93 Ga0075433_10158593 3300006852 Bacteria 2013
94 Ga0075433_10264696 3300006852 Bacteria 1524
95 Ga0075434_100001420 3300006871 Bacteria 20108
96 Ga0075434_100057867 3300006871 Bacteria 3852
97 Ga0075434_100058719 3300006871 Bacteria 3823
98 Ga0075434_100111209 3300006871 Bacteria 2750
99 Ga0075434_100223003 3300006871 Bacteria 1905
100 Ga0075429_100000001 3300006880 Bacteria 139031
101 Ga0075429_100054029 3300006880 Bacteria 3495
102 Ga0075429_100059961 3300006880 Bacteria 3315
103 Ga0075429_100146222 3300006880 Bacteria 2069
104 Ga0075429_100266959 3300006880 Bacteria 1499
105 Ga0075436_100000722 3300006914 Bacteria 21877
106 Ga0097620_100112837 3300006931 Bacteria 2782
107 Ga0075435_100032638 3300007076 Bacteria 4113
108 Ga0075435_100097476 3300007076 Bacteria 2433
109 Ga0075435_100131257 3300007076 Bacteria 2096
110 Ga0075435_100137419 3300007076 Bacteria 2048
111 Ga0099794_10006660 3300007265 Bacteria 4693
112 Ga0099794_10077171 3300007265 Bacteria 1638
113 Ga0111539_10006265 3300009094 Bacteria 15359
114 Ga0111539_10024896 3300009094 Bacteria 7337
115 Ga0111539_10029825 3300009094 Bacteria 6637
116 Ga0111539_10239711 3300009094 Bacteria 2111
117 Ga0111539_10343455 3300009094 Bacteria 1737
118 Ga0114129_10000156 3300009147 Bacteria 72734
119 Ga0114129_10002738 3300009147 Bacteria 24561
120 Ga0114129_10005904 3300009147 Bacteria 17321
121 Ga0114129_10011962 3300009147 Bacteria 12344
122 Ga0114129_10024814 3300009147 Bacteria 8498
123 Ga0114129_10026609 3300009147 Bacteria 8193
124 Ga0114129_10026611 3300009147 Bacteria 8192
125 Ga0114129_10036598 3300009147 Bacteria 6930
126 Ga0114129_10103441 3300009147 Bacteria 3938
127 Ga0114129_10172667 3300009147 Bacteria 2946
128 Ga0114129_10547759 3300009147 Bacteria 1505
129 Ga0105243_10072419 3300009148 Bacteria 2790
130 Ga0105241_10007999 3300009174 Bacteria 7777
131 Ga0105242_10030394 3300009176 Bacteria 4313
132 Ga0105248_10262932 3300009177 Bacteria 1942
133 Ga0105237_10327530 3300009545 Bacteria 1536
134 Ga0105249_10193393 3300009553 Bacteria 1987
135 Ga0157373_10091482 3300013100 Bacteria 2143
136 Ga0157370_10296379 3300013104 Bacteria 1493
137 Ga0163162_10138933 3300013306 Bacteria 2542
138 Ga0157375_10173517 3300013308 Bacteria 2305
139 Ga0157379_10160915 3300014968 Bacteria 2026
140 Ga0213871_10013349 3300021441 Bacteria 1929
141 Ga0209050_1004241 3300025298 Bacteria 9849
142 Ga0207426_1019647 3300025302 Bacteria 2359
143 Ga0207684_10000057 3300025910 Bacteria 211445
144 Ga0207684_10000370 3300025910 Bacteria 60789
145 Ga0207684_10003860 3300025910 Bacteria 14412
146 Ga0207684_10010223 3300025910 Bacteria 8261
147 Ga0207684_10030522 3300025910 Bacteria 4587
148 Ga0207684_10163326 3300025910 Bacteria 1918
149 Ga0207684_10266381 3300025910 Bacteria 1478
150 Ga0207693_10020303 3300025915 Bacteria 5286
151 Ga0207660_10023484 3300025917 Bacteria 4165
152 Ga0207657_10080625 3300025919 Bacteria 2735
153 Ga0207646_10000466 3300025922 Bacteria 54002
154 Ga0207646_10001054 3300025922 Bacteria 35091
155 Ga0207646_10004703 3300025922 Bacteria 14713
156 Ga0207646_10049627 3300025922 Bacteria 3758
157 Ga0207646_10057463 3300025922 Bacteria 3476
158 Ga0207646_10060604 3300025922 Bacteria 3378
159 Ga0207646_10137211 3300025922 Bacteria 2202
160 Ga0207681_10201786 3300025923 Bacteria 1527
161 Ga0207694_10171512 3300025924 Bacteria 1757
162 Ga0207706_10020080 3300025933 Bacteria 6003
163 Ga0207686_10010379 3300025934 Bacteria 5071
164 Ga0207709_10079747 3300025935 Bacteria 2106
165 Ga0207691_10062710 3300025940 Bacteria 3372
166 Ga0207711_10082285 3300025941 Bacteria 2814
167 Ga0207661_10095770 3300025944 Bacteria 2482
168 Ga0207712_10039896 3300025961 Bacteria 3219
169 Ga0207712_10097806 3300025961 Bacteria 2175
170 Ga0207708_10012754 3300026075 Bacteria 6267
171 Ga0207674_10021198 3300026116 Bacteria 7005
172 Ga0207698_10019146 3300026142 Bacteria 4679
173 Ga0209967_1002688 3300027364 Bacteria 2314
174 Ga0207428_10000018 3300027907 Bacteria 293117
175 Ga0207428_10000119 3300027907 Bacteria 106261
176 Ga0207428_10004177 3300027907 Bacteria 13837
177 Ga0268265_10026668 3300028380 Bacteria 4113
178 Ga0268265_10077698 3300028380 Bacteria 2608
179 Ga0268264_10117066 3300028381 Bacteria 2343
180 Ga0265334_10002743 3300028573 Bacteria 8140
181 Ga0265340_10016472 3300031247 Bacteria 3827
182 Ga0307408_100054590 3300031548 Bacteria 2889
183 Ga0307407_10116362 3300031903 Bacteria 1687
184 Ga0307412_10003718 3300031911 Bacteria 8472
185 Ga0373931_0005490 3300035691 Bacteria 5870
186 Ga0373927_0063646 3300035695 Bacteria 2386
187 Ga0395899_0054404 3300037312 Bacteria 2962
188 Ga0395899_0086211 3300037312 Bacteria 2281
189 Ga0395900_0018381 3300037418 Bacteria 7130
190 Ga0395898_0047655 3300037466 Bacteria 4204
191 Ga0395901_0042354 3300038443 Bacteria 4720
192 Ga0395901_0061281 3300038443 Bacteria 3915
193 Ga0395901_0100804 3300038443 Bacteria 3029
194 Ga0439435_0016892 3300042436 Bacteria 1837
195 Ga0439460_0000355 3300042461 Bacteria 9644
196 Ga0451577_0001635 3300042876 Bacteria 29060
197 Ga0451577_0072541 3300042876 Bacteria 3072
198 Ga0451577_0155637 3300042876 Bacteria 2057
199 Ga0451577_0167508 3300042876 Bacteria 1980
200 Ga0453683_0015074 3300044673 Bacteria 5016
201 Ga0453684_0015335 3300044712 Bacteria 12140
202 Ga0453684_0044800 3300044712 Bacteria 5912
203 Ga0453684_0214600 3300044712 Bacteria 2234
204 Ga0466957_0108513 3300044842 Bacteria 1758
205 Ga0451576_0010753 3300045051 Bacteria 10474
206 Ga0451576_0017649 3300045051 Bacteria 7842
207 Ga0451576_0152950 3300045051 Bacteria 2406
208 Ga0466967_0008744 3300045976 Bacteria 7460
209 Ga0495580_0000143 3300046472 Bacteria 51276
210 Ga0495669_0037103 3300046684 Bacteria 2156
211 Ga0496106_0082065 3300048909 Bacteria 2477
212 Ga0496110_0015580 3300048913 Bacteria 6331
213 Ga0496116_0009480 3300048919 Bacteria 8291
214 Ga0496117_0009648 3300048920 Bacteria 8931
215 Ga0496118_0017690 3300048921 Bacteria 6472
216 Ga0496120_0024370 3300048923 Bacteria 3774
217 Ga0496121_0000195 3300048924 Bacteria 136162
218 Ga0496122_0000936 3300048925 Bacteria 53067
219 Ga0496123_0005971 3300048926 Bacteria 11982
220 Ga0496123_0016829 3300048926 Bacteria 5911
221 Ga0496124_0052080 3300048927 Bacteria 3479
222 Ga0496125_0000364 3300048928 Bacteria 85440
223 Ga0496125_0018853 3300048928 Bacteria 6533
224 Ga0496125_0036029 3300048928 Bacteria 4328
225 Ga0496126_0023231 3300048929 Bacteria 6010
226 Ga0496126_0041560 3300048929 Bacteria 4253
227 Ga0496126_0153209 3300048929 Bacteria 1974
228 Ga0501031_0105252 3300049568 Bacteria 1841
229 Ga0501034_0077248 3300049571 Bacteria 3335
230 Ga0501036_0040718 3300049572 Bacteria 3930
231 Ga0501038_0016535 3300049574 Bacteria 6687
232 Ga0501038_0112668 3300049574 Bacteria 2252
233 Ga0501039_0007948 3300049575 Bacteria 8076
234 Ga0501040_0009191 3300049576 Bacteria 6438
235 Ga0501040_0015228 3300049576 Bacteria 5081
236 Ga0501040_0025753 3300049576 Bacteria 3957
237 Ga0501040_0067222 3300049576 Bacteria 2470
238 Ga0501041_0003919 3300049577 Bacteria 8580
239 Ga0501041_0034508 3300049577 Bacteria 3063
240 Ga0501042_0005925 3300049578 Bacteria 7906
241 Ga0501042_0113436 3300049578 Bacteria 1952
242 Ga0501048_0002571 3300049582 Bacteria 13888
243 Ga0501070_0163122 3300049586 Bacteria 1837
244 Ga0501071_0010346 3300049587 Bacteria 6248
245 Ga0501071_0051536 3300049587 Bacteria 2966
246 Ga0501072_0001067 3300049588 Bacteria 20321
247 Ga0501072_0024716 3300049588 Bacteria 4676
248 Ga0501075_0000347 3300049591 Bacteria 26292
249 Ga0501075_0012357 3300049591 Bacteria 6067
250 Ga0501075_0017500 3300049591 Bacteria 5179
251 Ga0501075_0056889 3300049591 Bacteria 2945
252 Ga0501075_0108989 3300049591 Bacteria 2105
253 Ga0501076_0003035 3300049592 Bacteria 11669
254 Ga0501076_0003341 3300049592 Bacteria 11257
255 Ga0501076_0008091 3300049592 Bacteria 7686
256 Ga0501077_0009067 3300049593 Bacteria 6176
257 Ga0501077_0030084 3300049593 Bacteria 3454
258 Ga0501077_0030573 3300049593 Bacteria 3426
259 Ga0501225_0018932 3300049705 Bacteria 1906
260 Ga0501079_0002208 3300049741 Bacteria 14038
261 Ga0501079_0003459 3300049741 Bacteria 11602
262 Ga0501079_0022668 3300049741 Bacteria 4817
263 Ga0501080_0107566 3300049742 Bacteria 2585
264 Ga0501081_0000414 3300049743 Bacteria 23540
265 Ga0501081_0010330 3300049743 Bacteria 6093
266 Ga0501035_0015656 3300049822 Bacteria 6999
267 Ga0501035_0145837 3300049822 Bacteria 2056
268 Ga0501044_0215670 3300049823 Bacteria 1872
269 Ga0501045_0002413 3300049824 Bacteria 12704
270 Ga0501045_0015323 3300049824 Bacteria 5442
271 Ga0501045_0125951 3300049824 Bacteria 1903
272 nmdc:mga06z11_13890_c1 3300050494 Bacteria 3550
273 nmdc:mga05p37_106937_c1 3300050507 Bacteria 3442
274 nmdc:mga05p37_11117_c1 3300050507 Bacteria 10699
275 nmdc:mga05p37_1865_c2 3300050507 Bacteria 9403
276 nmdc:mga05p37_1966_c1 3300050507 Bacteria 23972
277 nmdc:mga05p37_245_c1 3300050507 Bacteria 55562
278 nmdc:mga05p37_295823_c1 3300050507 Bacteria 1925
279 nmdc:mga05p37_36028_c1 3300050507 Bacteria 6071
280 nmdc:mga05p37_430627_c1 3300050507 Bacteria 1533
281 nmdc:mga05p37_69998_c1 3300050507 Bacteria 4316
282 nmdc:mga05p37_72140_c1 3300050507 Bacteria 4248
283 nmdc:mga05p37_88661_c1 3300050507 Bacteria 3813
284 nmdc:mga05p37_9391_c1 3300050507 Bacteria 11578
285 nmdc:mga09592_11029_c1 3300050508 Bacteria 7351
286 nmdc:mga09592_262471_c1 3300050508 Bacteria 1498
287 nmdc:mga09592_64364_c1 3300050508 Bacteria 3104
288 nmdc:mga09592_66851_c1 3300050508 Bacteria 3048
289 nmdc:mga09592_797_c1 3300050508 Bacteria 24389
290 nmdc:mga0qj67_116128_c1 3300050509 Bacteria 2163
291 nmdc:mga0qj67_12005_c1 3300050509 Bacteria 6510
292 nmdc:mga0qj67_528_c1 3300050509 Bacteria 26031
293 nmdc:mga0qj67_5695_c2 3300050509 Bacteria 8713
294 nmdc:mga0qj67_6392_c1 3300050509 Bacteria 8656
295 nmdc:mga06r32_11455_c1 3300050510 Bacteria 7985
296 nmdc:mga06r32_13591_c1 3300050510 Bacteria 7380
297 nmdc:mga06r32_150469_c1 3300050510 Bacteria 2306
298 nmdc:mga06r32_19981_c1 3300050510 Bacteria 6158
299 nmdc:mga06r32_30684_c1 3300050510 Bacteria 5045
300 nmdc:mga06r32_3683_c1 3300050510 Bacteria 13687
301 nmdc:mga06r32_63980_c1 3300050510 Bacteria 3547
302 nmdc:mga06r32_7435_c1 3300050510 Bacteria 9857
303 nmdc:mga06r32_9309_c1 3300050510 Bacteria 8855
304 nmdc:mga08y16_1288_c1 3300050511 Bacteria 24890
305 nmdc:mga08y16_2991_c1 3300050511 Bacteria 17434
306 nmdc:mga08y16_46176_c1 3300050511 Bacteria 4560
307 nmdc:mga08y16_9324_c1 3300050511 Bacteria 10294
308 nmdc:mga0n895_215998_c1 3300050512 Bacteria 1947
309 nmdc:mga0n895_25237_c1 3300050512 Bacteria 5614
310 nmdc:mga0n895_28592_c1 3300050512 Bacteria 5305
311 nmdc:mga0n895_39501_c1 3300050512 Bacteria 4579
312 nmdc:mga0n895_49650_c1 3300050512 Bacteria 4112
313 nmdc:mga0n895_54385_c1 3300050512 Bacteria 3938
314 nmdc:mga0n895_7727_c1 3300050512 Bacteria 9256
315 nmdc:mga0n895_90022_c1 3300050512 Bacteria 3070
316 nmdc:mga0rr50_14626_c1 3300050513 Bacteria 5154
317 nmdc:mga0rr50_36449_c1 3300050513 Bacteria 3542
318 nmdc:mga08x19_2554_c1 3300050514 Bacteria 11057
319 nmdc:mga08x19_52044_c1 3300050514 Bacteria 2632
320 nmdc:mga0a205_102128_c1 3300050515 Bacteria 2766
321 nmdc:mga0a205_1518_c1 3300050515 Bacteria 19847
322 nmdc:mga0a205_20074_c1 3300050515 Bacteria 6304
323 nmdc:mga0a205_22966_c1 3300050515 Bacteria 5914
324 nmdc:mga0a205_2435_c1 3300050515 Bacteria 16411
325 nmdc:mga0a205_29357_c1 3300050515 Bacteria 5262
326 nmdc:mga0a205_38390_c2 3300050515 Bacteria 3478
327 nmdc:mga0a205_40062_c1 3300050515 Bacteria 4510
328 nmdc:mga0a205_46837_c1 3300050515 Bacteria 4171
329 nmdc:mga0a205_7404_c1 3300050515 Bacteria 9941
330 nmdc:mga0a205_87543_c1 3300050515 Bacteria 3009
331 nmdc:mga0a205_9153_c1 3300050515 Bacteria 9037
332 nmdc:mga0sz30_965_c1 3300050516 Bacteria 10317
333 Ga0500641_0050116 3300053096 Bacteria 1714
334 Ga0501084_0020909 3300054114 Bacteria 5456
335 Ga0501084_0030878 3300054114 Bacteria 4480
336 Ga0501084_0041100 3300054114 Bacteria 3868
337 Ga0501084_0065429 3300054114 Bacteria 3041
338 Ga0501084_0196845 3300054114 Bacteria 1700
339 Ga0501082_0002366 3300060353 Bacteria 16513
340 Ga0501082_0015293 3300060353 Bacteria 6606
341 Ga0501082_0021468 3300060353 Bacteria 5569
342 Ga0530510_0005138 3300061734 Bacteria 9029
343 Ga0530510_0006084 3300061734 Bacteria 8380
344 Ga0530510_0006333 3300061734 Bacteria 8233
345 Ga0530510_0055548 3300061734 Bacteria 2860
346 2599904273 2599185292 Bacteria 6290804
347 2643859428 2643221569 Bacteria 6064337
348 2643982982 2643221594 Bacteria 5811388
349 2644123188 2643221621 Bacteria 6212786
350 2809033569 2808606395 Bacteria 6020352
351 2857537942 2857537821 Bacteria 5248181
352 2858954304 2858950400 Bacteria 6783797
353 2941484174
354 Ga0242420_004517
355 Ga0058861_11966689
356 Ga0065704_10077991
357 Ga0065707_10095085
358 Ga0070683_100026969
359 Ga0070680_100013244
360 Ga0070680_100059035
361 Ga0070660_100185886
362 Ga0070692_10029740
363 Ga0070669_100052976
364 Ga0070703_10008427
365 Ga0070713_100122048
366 Ga0070701_10003378
367 Ga0070705_100005055
368 Ga0070700_100034456
369 Ga0070708_100000402
370 Ga0070708_100011325
371 Ga0070708_100052495
372 Ga0070708_100123593
373 Ga0070708_100158474
374 Ga0070708_100180213
375 Ga0070708_100245463
376 Ga0070708_100324009
377 Ga0070678_100020347
378 Ga0070706_100000113
379 Ga0070706_100001137
380 Ga0070706_100007724
381 Ga0070706_100027679
382 Ga0070706_100046588
383 Ga0070706_100120429
384 Ga0070706_100120647
385 Ga0070707_100005204
386 Ga0070707_100006962
387 Ga0070707_100009756
388 Ga0070707_100033901
389 Ga0070707_100067745
390 Ga0070707_100079232
391 Ga0070698_100010154
392 Ga0070698_100015305
393 Ga0070698_100066021
394 Ga0070698_100135649
395 Ga0070698_100294267
396 Ga0070699_100000945
397 Ga0070699_100014195
398 Ga0070699_100016827
399 Ga0070699_100193891
400 Ga0070699_100200906
401 Ga0070699_100287505
402 Ga0070697_100000582
403 Ga0070697_100005517
404 Ga0070697_100010446
405 Ga0070697_100015409
406 Ga0070697_100081299
407 Ga0070697_100085308
408 Ga0070672_100030104
409 Ga0070696_100038481
410 Ga0070665_100056749
411 Ga0068855_100107736
412 Ga0068857_100024652
413 Ga0068856_100027965
414 Ga0068859_100112841
415 Ga0068861_100044694
416 Ga0068861_100280281
417 Ga0068870_10023669
418 Ga0068863_100061459
419 Ga0068860_100017284
420 Ga0081540_1013196
421 Ga0081540_1083869
422 Ga0081539_10000009
423 Ga0081539_10017586
424 Ga0075365_10024343
425 Ga0075364_10000449
426 Ga0075364_10019391
427 Ga0075364_10147717
428 Ga0070712_100012699
429 Ga0075369_10047281
430 Ga0068871_100285103
431 Ga0075428_100008321
432 Ga0075428_100124358
433 Ga0075428_100171907
434 Ga0075430_100000036
435 Ga0075430_100105073
436 Ga0075430_100126602
437 Ga0075431_100000441
438 Ga0075431_100009225
439 Ga0075431_100050412
440 Ga0075431_100102704
441 Ga0075431_100162983
442 Ga0075431_100208750
443 Ga0075433_10015282
444 Ga0075433_10024305
445 Ga0075433_10079356
446 Ga0075433_10158593
447 Ga0075433_10264696
448 Ga0075434_100001420
449 Ga0075434_100057867
450 Ga0075434_100058719
451 Ga0075434_100111209
452 Ga0075434_100223003
453 Ga0075429_100000001
454 Ga0075429_100054029
455 Ga0075429_100059961
456 Ga0075429_100146222
457 Ga0075429_100266959
458 Ga0075436_100000722
459 Ga0097620_100112837
460 Ga0075435_100032638
461 Ga0075435_100097476
462 Ga0075435_100131257
463 Ga0075435_100137419
464 Ga0099794_10006660
465 Ga0099794_10077171
466 Ga0111539_10006265
467 Ga0111539_10024896
468 Ga0111539_10029825
469 Ga0111539_10239711
470 Ga0111539_10343455
471 Ga0114129_10000156
472 Ga0114129_10002738
473 Ga0114129_10005904
474 Ga0114129_10011962
475 Ga0114129_10024814
476 Ga0114129_10026609
477 Ga0114129_10026611
478 Ga0114129_10036598
479 Ga0114129_10103441
480 Ga0114129_10172667
481 Ga0114129_10547759
482 Ga0105243_10072419
483 Ga0105241_10007999
484 Ga0105242_10030394
485 Ga0105248_10262932
486 Ga0105237_10327530
487 Ga0105249_10193393
488 Ga0157373_10091482
489 Ga0157370_10296379
490 Ga0163162_10138933
491 Ga0157375_10173517
492 Ga0157379_10160915
493 Ga0213871_10013349
494 Ga0209050_1004241
495 Ga0207426_1019647
496 Ga0207684_10000057
497 Ga0207684_10000370
498 Ga0207684_10003860
499 Ga0207684_10010223
500 Ga0207684_10030522
501 Ga0207684_10163326
502 Ga0207684_10266381
503 Ga0207693_10020303
504 Ga0207660_10023484
505 Ga0207657_10080625
506 Ga0207646_10000466
507 Ga0207646_10001054
508 Ga0207646_10004703
509 Ga0207646_10049627
510 Ga0207646_10057463
511 Ga0207646_10060604
512 Ga0207646_10137211
513 Ga0207681_10201786
514 Ga0207694_10171512
515 Ga0207706_10020080
516 Ga0207686_10010379
517 Ga0207709_10079747
518 Ga0207691_10062710
519 Ga0207711_10082285
520 Ga0207661_10095770
521 Ga0207712_10039896
522 Ga0207712_10097806
523 Ga0207708_10012754
524 Ga0207674_10021198
525 Ga0207698_10019146
526 Ga0209967_1002688
527 Ga0207428_10000018
528 Ga0207428_10000119
529 Ga0207428_10004177
530 Ga0268265_10026668
531 Ga0268265_10077698
532 Ga0268264_10117066
533 Ga0265334_10002743
534 Ga0265340_10016472
535 Ga0307408_100054590
536 Ga0307407_10116362
537 Ga0307412_10003718
538 Ga0373931_0005490
539 Ga0373927_0063646
540 Ga0395899_0054404
541 Ga0395899_0086211
542 Ga0395900_0018381
543 Ga0395898_0047655
544 Ga0395901_0042354
545 Ga0395901_0061281
546 Ga0395901_0100804
547 Ga0439435_0016892
548 Ga0439460_0000355
549 Ga0451577_0001635
550 Ga0451577_0072541
551 Ga0451577_0155637
552 Ga0451577_0167508
553 Ga0453683_0015074
554 Ga0453684_0015335
555 Ga0453684_0044800
556 Ga0453684_0214600
557 Ga0466957_0108513
558 Ga0451576_0010753
559 Ga0451576_0017649
560 Ga0451576_0152950
561 Ga0466967_0008744
562 Ga0495580_0000143
563 Ga0495669_0037103
564 Ga0496106_0082065
565 Ga0496110_0015580
566 Ga0496116_0009480
567 Ga0496117_0009648
568 Ga0496118_0017690
569 Ga0496120_0024370
570 Ga0496121_0000195
571 Ga0496122_0000936
572 Ga0496123_0005971
573 Ga0496123_0016829
574 Ga0496124_0052080
575 Ga0496125_0000364
576 Ga0496125_0018853
577 Ga0496125_0036029
578 Ga0496126_0023231
579 Ga0496126_0041560
580 Ga0496126_0153209
581 Ga0501031_0105252
582 Ga0501034_0077248
583 Ga0501036_0040718
584 Ga0501038_0016535
585 Ga0501038_0112668
586 Ga0501039_0007948
587 Ga0501040_0009191
588 Ga0501040_0015228
589 Ga0501040_0025753
590 Ga0501040_0067222
591 Ga0501041_0003919
592 Ga0501041_0034508
593 Ga0501042_0005925
594 Ga0501042_0113436
595 Ga0501048_0002571
596 Ga0501070_0163122
597 Ga0501071_0010346
598 Ga0501071_0051536
599 Ga0501072_0001067
600 Ga0501072_0024716
601 Ga0501075_0000347
602 Ga0501075_0012357
603 Ga0501075_0017500
604 Ga0501075_0056889
605 Ga0501075_0108989
606 Ga0501076_0003035
607 Ga0501076_0003341
608 Ga0501076_0008091
609 Ga0501077_0009067
610 Ga0501077_0030084
611 Ga0501077_0030573
612 Ga0501225_0018932
613 Ga0501079_0002208
614 Ga0501079_0003459
615 Ga0501079_0022668
616 Ga0501080_0107566
617 Ga0501081_0000414
618 Ga0501081_0010330
619 Ga0501035_0015656
620 Ga0501035_0145837
621 Ga0501044_0215670
622 Ga0501045_0002413
623 Ga0501045_0015323
624 Ga0501045_0125951
625 nmdc:mga06z11_13890_c1
626 nmdc:mga05p37_106937_c1
627 nmdc:mga05p37_11117_c1
628 nmdc:mga05p37_1865_c2
629 nmdc:mga05p37_1966_c1
630 nmdc:mga05p37_245_c1
631 nmdc:mga05p37_295823_c1
632 nmdc:mga05p37_36028_c1
633 nmdc:mga05p37_430627_c1
634 nmdc:mga05p37_69998_c1
635 nmdc:mga05p37_72140_c1
636 nmdc:mga05p37_88661_c1
637 nmdc:mga05p37_9391_c1
638 nmdc:mga09592_11029_c1
639 nmdc:mga09592_262471_c1
640 nmdc:mga09592_64364_c1
641 nmdc:mga09592_66851_c1
642 nmdc:mga09592_797_c1
643 nmdc:mga0qj67_116128_c1
644 nmdc:mga0qj67_12005_c1
645 nmdc:mga0qj67_528_c1
646 nmdc:mga0qj67_5695_c2
647 nmdc:mga0qj67_6392_c1
648 nmdc:mga06r32_11455_c1
649 nmdc:mga06r32_13591_c1
650 nmdc:mga06r32_150469_c1
651 nmdc:mga06r32_19981_c1
652 nmdc:mga06r32_30684_c1
653 nmdc:mga06r32_3683_c1
654 nmdc:mga06r32_63980_c1
655 nmdc:mga06r32_7435_c1
656 nmdc:mga06r32_9309_c1
657 nmdc:mga08y16_1288_c1
658 nmdc:mga08y16_2991_c1
659 nmdc:mga08y16_46176_c1
660 nmdc:mga08y16_9324_c1
661 nmdc:mga0n895_215998_c1
662 nmdc:mga0n895_25237_c1
663 nmdc:mga0n895_28592_c1
664 nmdc:mga0n895_39501_c1
665 nmdc:mga0n895_49650_c1
666 nmdc:mga0n895_54385_c1
667 nmdc:mga0n895_7727_c1
668 nmdc:mga0n895_90022_c1
669 nmdc:mga0rr50_14626_c1
670 nmdc:mga0rr50_36449_c1
671 nmdc:mga08x19_2554_c1
672 nmdc:mga08x19_52044_c1
673 nmdc:mga0a205_102128_c1
674 nmdc:mga0a205_1518_c1
675 nmdc:mga0a205_20074_c1
676 nmdc:mga0a205_22966_c1
677 nmdc:mga0a205_2435_c1
678 nmdc:mga0a205_29357_c1
679 nmdc:mga0a205_38390_c2
680 nmdc:mga0a205_40062_c1
681 nmdc:mga0a205_46837_c1
682 nmdc:mga0a205_7404_c1
683 nmdc:mga0a205_87543_c1
684 nmdc:mga0a205_9153_c1
685 nmdc:mga0sz30_965_c1
686 Ga0500641_0050116
687 Ga0501084_0020909
688 Ga0501084_0030878
689 Ga0501084_0041100
690 Ga0501084_0065429
691 Ga0501084_0196845
692 Ga0501082_0002366
693 Ga0501082_0015293
694 Ga0501082_0021468
695 Ga0530510_0005138
696 Ga0530510_0006084
697 Ga0530510_0006333
698 Ga0530510_0055548
699 2599904273
700 2643859428
701 2643982982
702 2644123188
703 2809033569
704 2857537942
705 2858954304
706 2941484174

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13458

Peripla_BP_6

Periplasmic binding protein

95

463

0.92

PF13298

LigD_N

DNA polymerase Ligase (LigD)

1

78

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ru0-assembly2.cif.gz_B the crystal structure of abc transporter permease from pseudomonas fluorescens group 0.9561 28 435
4ru0-assembly2.cif.gz_B the crystal structure of abc transporter permease from pseudomonas fluorescens group 0.9383 28 435
3lkb-assembly1.cif.gz_A crystal structure of a branched chain amino acid abc transporter from thermus thermophilus with bound valine 0.8544 27 412
3td9-assembly1.cif.gz_A-2 crystal structure of a leucine binding protein livk (tm1135) from thermotoga maritima msb8 at 1.90 a resolution 0.8456 31 408
3lkb-assembly1.cif.gz_A crystal structure of a branched chain amino acid abc transporter from thermus thermophilus with bound valine 0.8441 27 412
ID Description Score Start End Superfamily
3lkbB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8763 149 284 3.40.50.2300
3sg0A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.874 154 282 3.40.50.2300
4jb2A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8697 153 283 3.40.50.2300
3hutA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8454 149 284 3.40.50.2300
1usiA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8409 152 281 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A382AIW7-F1-model_v4 Leucine-binding protein domain-containing protein 0.9891 51 434
AF-A0A537BQ30-F1-model_v4 ABC transporter permease 0.9839 151 439
AF-A0A249P4E5-F1-model_v4 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein 0.9838 114 439
AF-A0A2E4WED4-F1-model_v4 ABC transporter permease 0.9832 116 434
AF-A0A537A442-F1-model_v4 ABC transporter permease 0.9822 183 439

Map