F418959

General Info

Members Datasets Scaffolds Average Seq Length
352 162 704 376

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10010576|Ga0081538_100105768
Length 428
Sequence VATTDRASTARPGLGDLVPERARPGGRRGEWWRGWFAPAQGLRPRPLDVLVALVIAFVQVAGTVAYSQDEPPSPWAFDALAYIPLAAGPVALLFRRRWPEATLVVAFAAAAGYAASGYPRGPAGFPAFAFAVVSAIMMGRRAFAWGALAVAYLAFTWLPSLIPDEVEEARGLAGAATNLVWLPLVGAVGEIARIRVERRADRAQLAREEERLLIARELHDVLAHNISLINVQSGVALHLLDERPEQARPALEAINEASEEVLGELRSVLDVLHGGLGDSAWAPHAPTAGLRDVDGLVRRTRAAGLDVQLAVDGEARPVPAGVDLAAFRIVQEALTNVVRHGGGGARATVRLVYAPAGLVVRVDDDGRGVESASGRRSRDSDRQIRRSGRGIAGMRERVQALGGTFTAGPRPGGGFGVRARFPLEDGSR

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
77 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
78 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
79 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
80 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
81 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
82 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
83 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
84 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
85 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
86 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
98 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
99 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
160 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
161 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
162 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.86
Metatranscriptomes 0
Isolates 1.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.14
Nodule 0
Rhizoplane 3.98
Rhizosphere 92.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10010576 3300005981 Bacteria 7557
2 JGI25406J46586_10004756 3300003203 Bacteria 6313
3 JGI25406J46586_10005514 3300003203 Bacteria 5861
4 JGI25407J50210_10000828 3300003373 Bacteria 6628
5 JGI25407J50210_10011097 3300003373 Bacteria 2301
6 Ga0070689_100233711 3300005340 Bacteria 1512
7 Ga0070668_100031898 3300005347 Bacteria 4010
8 Ga0070668_100100729 3300005347 Bacteria 2288
9 Ga0070674_100170861 3300005356 Bacteria 1657
10 Ga0070674_100187643 3300005356 Bacteria 1588
11 Ga0070688_100042892 3300005365 Bacteria 2785
12 Ga0070714_100009656 3300005435 Bacteria 7597
13 Ga0070714_100023375 3300005435 Bacteria 5077
14 Ga0070714_100145744 3300005435 Bacteria 2130
15 Ga0070714_100185787 3300005435 Bacteria 1894
16 Ga0070713_100010859 3300005436 Bacteria 6602
17 Ga0070681_10232422 3300005458 Bacteria 1758
18 Ga0068867_100011507 3300005459 Bacteria 6246
19 Ga0070686_100010156 3300005544 Bacteria 5300
20 Ga0068855_100003723 3300005563 Bacteria 18638
21 Ga0068856_100235321 3300005614 Bacteria 1847
22 Ga0070702_100066485 3300005615 Bacteria 2114
23 Ga0068866_10001996 3300005718 Bacteria 8497
24 Ga0068858_100000024 3300005842 Bacteria 166473
25 Ga0081455_10001431 3300005937 Bacteria 29530
26 Ga0081455_10001651 3300005937 Bacteria 27074
27 Ga0081455_10025613 3300005937 Bacteria 5440
28 Ga0081455_10037051 3300005937 Bacteria 4335
29 Ga0081455_10048651 3300005937 Bacteria 3661
30 Ga0081455_10065236 3300005937 Bacteria 3046
31 Ga0081538_10000236 3300005981 Bacteria 62334
32 Ga0081538_10000356 3300005981 Bacteria 52018
33 Ga0081538_10001361 3300005981 Bacteria 25143
34 Ga0081538_10002317 3300005981 Bacteria 18802
35 Ga0081538_10003464 3300005981 Bacteria 14901
36 Ga0081538_10006351 3300005981 Bacteria 10426
37 Ga0081538_10008584 3300005981 Bacteria 8646
38 Ga0081538_10012138 3300005981 Bacteria 6925
39 Ga0081538_10013145 3300005981 Bacteria 6573
40 Ga0081538_10016863 3300005981 Bacteria 5574
41 Ga0081538_10035962 3300005981 Bacteria 3242
42 Ga0081538_10037202 3300005981 Bacteria 3163
43 Ga0081538_10044979 3300005981 Bacteria 2744
44 Ga0081538_10047572 3300005981 Bacteria 2629
45 Ga0081538_10054979 3300005981 Bacteria 2348
46 Ga0081538_10063139 3300005981 Bacteria 2105
47 Ga0081538_10071573 3300005981 Bacteria 1907
48 Ga0081538_10075367 3300005981 Bacteria 1831
49 Ga0081539_10004183 3300005985 Bacteria 16348
50 Ga0081539_10051041 3300005985 Bacteria 2335
51 Ga0070717_10038451 3300006028 Bacteria 3889
52 Ga0075363_100037445 3300006048 Bacteria 2547
53 Ga0075364_10002391 3300006051 Bacteria 10522
54 Ga0075427_10004601 3300006194 Bacteria 1939
55 Ga0075428_100008950 3300006844 Bacteria 11109
56 Ga0075428_100045597 3300006844 Bacteria 4816
57 Ga0075430_100005143 3300006846 Bacteria 11014
58 Ga0075430_100074765 3300006846 Bacteria 2841
59 Ga0075431_100003895 3300006847 Bacteria 14528
60 Ga0075431_100038084 3300006847 Bacteria 4951
61 Ga0075433_10012646 3300006852 Bacteria 6827
62 Ga0075434_100011818 3300006871 Bacteria 8249
63 Ga0075429_100000385 3300006880 Bacteria 32534
64 Ga0075429_100088671 3300006880 Bacteria 2697
65 Ga0075429_100146260 3300006880 Bacteria 2068
66 Ga0068865_100013921 3300006881 Bacteria 5100
67 Ga0105240_10007415 3300009093 Bacteria 15937
68 Ga0111539_10032153 3300009094 Bacteria 6373
69 Ga0111539_10146346 3300009094 Bacteria 2766
70 Ga0111539_10269890 3300009094 Bacteria 1980
71 Ga0111539_10476277 3300009094 Bacteria 1454
72 Ga0105247_10000670 3300009101 Bacteria 27002
73 Ga0114129_10003531 3300009147 Bacteria 21990
74 Ga0114129_10042126 3300009147 Bacteria 6429
75 Ga0105243_10009702 3300009148 Bacteria 7331
76 Ga0105243_10024883 3300009148 Bacteria 4570
77 Ga0105242_10004320 3300009176 Bacteria 11068
78 Ga0157370_10002635 3300013104 Bacteria 21559
79 Ga0157369_10002998 3300013105 Bacteria 20208
80 Ga0157375_10055418 3300013308 Bacteria 3909
81 Ga0157375_10172907 3300013308 Bacteria 2308
82 Ga0163163_10132584 3300014325 Bacteria 2532
83 Ga0157380_10138192 3300014326 Bacteria 2089
84 Ga0157379_10000203 3300014968 Bacteria 46082
85 Ga0163161_10147032 3300017792 Bacteria 1788
86 Ga0163161_10163563 3300017792 Bacteria 1698
87 Ga0207642_10034251 3300025899 Bacteria 2158
88 Ga0207710_10000110 3300025900 Bacteria 104170
89 Ga0207700_10025428 3300025928 Bacteria 4110
90 Ga0207664_10003968 3300025929 Bacteria 9961
91 Ga0207664_10073943 3300025929 Bacteria 2752
92 Ga0207706_10012248 3300025933 Bacteria 7817
93 Ga0207706_10355892 3300025933 Bacteria 1272
94 Ga0207709_10083765 3300025935 Bacteria 2063
95 Ga0207669_10057836 3300025937 Bacteria 2363
96 Ga0207704_10027875 3300025938 Bacteria 3124
97 Ga0207712_10031695 3300025961 Bacteria 3563
98 Ga0207712_10346933 3300025961 Bacteria 1233
99 Ga0207668_10100794 3300025972 Bacteria 2145
100 Ga0207703_10000005 3300026035 Bacteria 506356
101 Ga0207702_10182377 3300026078 Bacteria 1934
102 Ga0207648_10002212 3300026089 Bacteria 21087
103 Ga0207675_100031074 3300026118 Bacteria 4973
104 Ga0207675_100325721 3300026118 Bacteria 1501
105 Ga0207428_10003477 3300027907 Bacteria 15280
106 Ga0207428_10173412 3300027907 Bacteria 1632
107 Ga0307408_100142212 3300031548 Bacteria 1884
108 Ga0307405_10006448 3300031731 Bacteria 5773
109 Ga0307405_10055563 3300031731 Bacteria 2478
110 Ga0307413_10035241 3300031824 Bacteria 2868
111 Ga0307413_10035952 3300031824 Bacteria 2847
112 Ga0307410_10024520 3300031852 Bacteria 3769
113 Ga0307410_10119567 3300031852 Bacteria 1919
114 Ga0307407_10007443 3300031903 Bacteria 4960
115 Ga0307407_10072054 3300031903 Bacteria 2059
116 Ga0307407_10136641 3300031903 Bacteria 1576
117 Ga0307412_10020997 3300031911 Bacteria 3983
118 Ga0307412_10132204 3300031911 Bacteria 1814
119 Ga0307409_100009073 3300031995 Bacteria 6087
120 Ga0307409_100025191 3300031995 Bacteria 4167
121 Ga0307409_100035517 3300031995 Bacteria 3653
122 Ga0307409_100068948 3300031995 Bacteria 2799
123 Ga0307409_100165176 3300031995 Bacteria 1941
124 Ga0307409_100172445 3300031995 Bacteria 1905
125 Ga0307409_100236959 3300031995 Bacteria 1658
126 Ga0307416_100010503 3300032002 Bacteria 6119
127 Ga0307416_100019152 3300032002 Bacteria 4845
128 Ga0307416_100127103 3300032002 Bacteria 2285
129 Ga0307416_100247819 3300032002 Bacteria 1731
130 Ga0307416_100314499 3300032002 Bacteria 1564
131 Ga0307414_10016064 3300032004 Bacteria 4539
132 Ga0307414_10123379 3300032004 Bacteria 1996
133 Ga0307411_10002872 3300032005 Bacteria 7791
134 Ga0307411_10050172 3300032005 Bacteria 2716
135 Ga0307415_100000481 3300032126 Bacteria 17277
136 Ga0307415_100003365 3300032126 Bacteria 8126
137 Ga0307415_100042792 3300032126 Bacteria 3017
138 Ga0307415_100090600 3300032126 Bacteria 2212
139 Ga0395900_0082453 3300037418 Bacteria 3304
140 Ga0395900_0132596 3300037418 Bacteria 2553
141 Ga0395900_0133053 3300037418 Bacteria 2548
142 Ga0395900_0304030 3300037418 Bacteria 1580
143 Ga0395898_0044777 3300037466 Bacteria 4353
144 Ga0395905_0152973 3300037471 Bacteria 2170
145 Ga0395905_0156000 3300037471 Bacteria 2147
146 Ga0436364_0250852 3300037853 Bacteria 2446
147 Ga0436364_0485333 3300037853 Bacteria 18545
148 Ga0395901_0008666 3300038443 Bacteria 10277
149 Ga0395901_0041752 3300038443 Bacteria 4755
150 Ga0436365_0438688 3300039437 Bacteria 6767
151 Ga0439443_006091 3300042003 Bacteria 1638
152 Ga0439448_0000021 3300042005 Bacteria 26881
153 Ga0439448_0006639 3300042005 Bacteria 3332
154 Ga0439450_000049 3300042008 Bacteria 10449
155 Ga0439454_001623 3300042011 Bacteria 2204
156 Ga0439463_000076 3300042016 Bacteria 22783
157 Ga0439463_009741 3300042016 Bacteria 2361
158 Ga0450900_010832 3300042136 Bacteria 1175
159 Ga0450902_005893 3300042137 Bacteria 1866
160 Ga0439444_0005181 3300042437 Bacteria 1925
161 Ga0439464_0017712 3300042439 Bacteria 1933
162 Ga0439460_0000385 3300042461 Bacteria 9366
163 Ga0439460_0012877 3300042461 Bacteria 2178
164 Ga0439440_0001902 3300042993 Bacteria 3880
165 Ga0439440_0033798 3300042993 Bacteria 1220
166 Ga0466966_0065044 3300044684 Bacteria 2294
167 Ga0466961_0165873 3300044693 Bacteria 1375
168 Ga0466963_0010153 3300044694 Bacteria 5693
169 Ga0466963_0028985 3300044694 Bacteria 3559
170 Ga0466963_0217802 3300044694 Bacteria 1337
171 Ga0466968_0025238 3300044735 Bacteria 2433
172 Ga0466970_0087431 3300044765 Bacteria 1690
173 Ga0466957_0004676 3300044842 Bacteria 7654
174 Ga0466958_0002339 3300045836 Bacteria 9475
175 Ga0466958_0023230 3300045836 Bacteria 3637
176 Ga0466967_0003779 3300045976 Bacteria 9998
177 Ga0466967_0043979 3300045976 Bacteria 3870
178 Ga0495628_0116720 3300046516 Bacteria 2050
179 Ga0495630_0105593 3300046517 Bacteria 2133
180 Ga0495656_0033150 3300046615 Bacteria 2106
181 Ga0495636_0064251 3300047318 Bacteria 1557
182 Ga0495602_0064726 3300048088 Bacteria 3159
183 Ga0496101_0078495 3300048904 Bacteria 2435
184 Ga0496102_0132104 3300048905 Bacteria 2338
185 Ga0496103_0108222 3300048906 Bacteria 1764
186 Ga0496104_0046562 3300048907 Bacteria 4084
187 Ga0496105_0054184 3300048908 Bacteria 3312
188 Ga0496105_0095293 3300048908 Bacteria 2458
189 Ga0496106_0072425 3300048909 Bacteria 2635
190 Ga0496107_0145026 3300048910 Bacteria 1755
191 Ga0496108_0086510 3300048911 Bacteria 2661
192 Ga0496108_0118202 3300048911 Bacteria 2272
193 Ga0496110_0042277 3300048913 Bacteria 3978
194 Ga0496112_0001126 3300048915 Bacteria 19883
195 Ga0496113_0025861 3300048916 Bacteria 4190
196 Ga0496114_0199002 3300048917 Bacteria 1754
197 Ga0496119_0015420 3300048922 Bacteria 5885
198 Ga0496121_0013028 3300048924 Bacteria 8981
199 Ga0496126_0006979 3300048929 Bacteria 12483
200 Ga0496126_0069979 3300048929 Bacteria 3128
201 Ga0501031_0000360 3300049568 Bacteria 26525
202 Ga0501031_0001445 3300049568 Bacteria 14740
203 Ga0501031_0009955 3300049568 Bacteria 6190
204 Ga0501031_0072633 3300049568 Bacteria 2240
205 Ga0501032_0025993 3300049569 Bacteria 4032
206 Ga0501032_0038154 3300049569 Bacteria 3273
207 Ga0501032_0048288 3300049569 Bacteria 2874
208 Ga0501032_0056670 3300049569 Bacteria 2634
209 Ga0501033_0002712 3300049570 Bacteria 14853
210 Ga0501033_0006097 3300049570 Bacteria 9455
211 Ga0501033_0013842 3300049570 Bacteria 6138
212 Ga0501033_0055501 3300049570 Bacteria 2929
213 Ga0501036_0000272 3300049572 Bacteria 35377
214 Ga0501036_0000811 3300049572 Bacteria 23196
215 Ga0501036_0002196 3300049572 Bacteria 15246
216 Ga0501036_0005452 3300049572 Bacteria 10309
217 Ga0501036_0019121 3300049572 Bacteria 5747
218 Ga0501037_0003858 3300049573 Bacteria 10875
219 Ga0501037_0007969 3300049573 Bacteria 7765
220 Ga0501037_0012669 3300049573 Bacteria 6214
221 Ga0501037_0016808 3300049573 Bacteria 5383
222 Ga0501038_0001666 3300049574 Bacteria 20587
223 Ga0501038_0004217 3300049574 Bacteria 13360
224 Ga0501038_0005901 3300049574 Bacteria 11320
225 Ga0501039_0000197 3300049575 Bacteria 43481
226 Ga0501039_0000328 3300049575 Bacteria 33856
227 Ga0501039_0000551 3300049575 Bacteria 27127
228 Ga0501039_0000614 3300049575 Bacteria 25777
229 Ga0501039_0003245 3300049575 Bacteria 12166
230 Ga0501040_0000209 3300049576 Bacteria 34062
231 Ga0501040_0000337 3300049576 Bacteria 27531
232 Ga0501040_0000816 3300049576 Bacteria 19445
233 Ga0501040_0004731 3300049576 Bacteria 8836
234 Ga0501040_0121270 3300049576 Bacteria 1834
235 Ga0501041_0000263 3300049577 Bacteria 24851
236 Ga0501041_0000411 3300049577 Bacteria 21621
237 Ga0501041_0001603 3300049577 Bacteria 12627
238 Ga0501041_0002586 3300049577 Bacteria 10320
239 Ga0501041_0008899 3300049577 Bacteria 5908
240 Ga0501042_0000007 3300049578 Bacteria 63673
241 Ga0501042_0000210 3300049578 Bacteria 27775
242 Ga0501042_0000908 3300049578 Bacteria 16559
243 Ga0501042_0001769 3300049578 Bacteria 12922
244 Ga0501042_0023653 3300049578 Bacteria 4301
245 Ga0501042_0133867 3300049578 Bacteria 1787
246 Ga0501043_0032517 3300049579 Bacteria 4102
247 Ga0501046_0000880 3300049580 Bacteria 29202
248 Ga0501046_0001199 3300049580 Bacteria 25205
249 Ga0501046_0002536 3300049580 Bacteria 17085
250 Ga0501046_0006739 3300049580 Bacteria 10147
251 Ga0501047_0158936 3300049581 Bacteria 2132
252 Ga0501048_0000320 3300049582 Bacteria 32947
253 Ga0501048_0004348 3300049582 Bacteria 10781
254 Ga0501048_0004595 3300049582 Bacteria 10505
255 Ga0501048_0007280 3300049582 Bacteria 8392
256 Ga0501068_0055420 3300049584 Bacteria 2402
257 Ga0501068_0065598 3300049584 Bacteria 2210
258 Ga0501068_0123998 3300049584 Bacteria 1612
259 Ga0501068_0128078 3300049584 Bacteria 1586
260 Ga0501069_0027922 3300049585 Bacteria 3094
261 Ga0501069_0057691 3300049585 Bacteria 2165
262 Ga0501070_0006780 3300049586 Bacteria 9746
263 Ga0501070_0123256 3300049586 Bacteria 2142
264 Ga0501070_0323990 3300049586 Bacteria 1253
265 Ga0501071_0001132 3300049587 Bacteria 14899
266 Ga0501071_0001636 3300049587 Bacteria 13155
267 Ga0501071_0001912 3300049587 Bacteria 12392
268 Ga0501071_0041810 3300049587 Bacteria 3282
269 Ga0501072_0000195 3300049588 Bacteria 44197
270 Ga0501072_0001730 3300049588 Bacteria 16273
271 Ga0501072_0002194 3300049588 Bacteria 14588
272 Ga0501074_0000297 3300049590 Bacteria 28572
273 Ga0501074_0003483 3300049590 Bacteria 11168
274 Ga0501074_0003547 3300049590 Bacteria 11064
275 Ga0501074_0113766 3300049590 Bacteria 1936
276 Ga0501075_0000331 3300049591 Bacteria 26704
277 Ga0501075_0000497 3300049591 Bacteria 23584
278 Ga0501075_0001600 3300049591 Bacteria 14824
279 Ga0501075_0002302 3300049591 Bacteria 12679
280 Ga0501075_0041367 3300049591 Bacteria 3453
281 Ga0501075_0041403 3300049591 Bacteria 3452
282 Ga0501076_0000192 3300049592 Bacteria 36610
283 Ga0501076_0000217 3300049592 Bacteria 34870
284 Ga0501076_0001964 3300049592 Bacteria 14035
285 Ga0501076_0005836 3300049592 Bacteria 8881
286 Ga0501076_0041306 3300049592 Bacteria 3628
287 Ga0501077_0000856 3300049593 Bacteria 18397
288 Ga0501077_0000981 3300049593 Bacteria 17196
289 Ga0501077_0001573 3300049593 Bacteria 13752
290 Ga0501077_0004590 3300049593 Bacteria 8389
291 Ga0501257_000733 3300049686 Bacteria 6523
292 Ga0501079_0000200 3300049741 Bacteria 34694
293 Ga0501079_0001415 3300049741 Bacteria 16922
294 Ga0501079_0002777 3300049741 Bacteria 12768
295 Ga0501079_0003311 3300049741 Bacteria 11812
296 Ga0501079_0020741 3300049741 Bacteria 5025
297 Ga0501079_0030515 3300049741 Bacteria 4142
298 Ga0501080_0012876 3300049742 Bacteria 7675
299 Ga0501080_0179289 3300049742 Bacteria 1950
300 Ga0501081_0000172 3300049743 Bacteria 30389
301 Ga0501081_0000413 3300049743 Bacteria 23565
302 Ga0501081_0001415 3300049743 Bacteria 14670
303 Ga0501081_0004402 3300049743 Bacteria 9036
304 Ga0501081_0010814 3300049743 Bacteria 5961
305 Ga0501083_0052560 3300049744 Bacteria 2737
306 Ga0501035_0044731 3300049822 Bacteria 3985
307 Ga0501035_0122302 3300049822 Bacteria 2274
308 Ga0501044_0144360 3300049823 Bacteria 2367
309 Ga0501044_0294620 3300049823 Bacteria 1553
310 Ga0501045_0000015 3300049824 Bacteria 72669
311 Ga0501045_0001887 3300049824 Bacteria 14195
312 Ga0501045_0005230 3300049824 Bacteria 8976
313 Ga0501045_0006021 3300049824 Bacteria 8396
314 Ga0501045_0007307 3300049824 Bacteria 7675
315 nmdc:mga00v17_2492_c1 3300050491 Bacteria 4023
316 nmdc:mga05p37_13827_c1 3300050507 Bacteria 9670
317 nmdc:mga05p37_2063_c1 3300050507 Bacteria 23423
318 nmdc:mga09592_32569_c1 3300050508 Bacteria 4346
319 nmdc:mga09592_408_c1 3300050508 Bacteria 31545
320 nmdc:mga09592_98081_c1 3300050508 Bacteria 2508
321 nmdc:mga0qj67_182144_c1 3300050509 Bacteria 1706
322 nmdc:mga0qj67_525_c1 3300050509 Bacteria 26055
323 nmdc:mga06r32_14442_c1 3300050510 Bacteria 7168
324 nmdc:mga06r32_246372_c1 3300050510 Bacteria 1775
325 nmdc:mga08y16_5342_c1 3300050511 Bacteria 13441
326 nmdc:mga08y16_64085_c1 3300050511 Bacteria 3838
327 nmdc:mga0a205_2076_c1 3300050515 Bacteria 17524
328 nmdc:mga0a205_32490_c1 3300050515 Bacteria 5004
329 Ga0500616_0001307 3300053153 Bacteria 24658
330 Ga0501084_0000298 3300054114 Bacteria 37605
331 Ga0501084_0000331 3300054114 Bacteria 36157
332 Ga0501084_0000576 3300054114 Bacteria 28065
333 Ga0501084_0001074 3300054114 Bacteria 21252
334 Ga0501084_0001561 3300054114 Bacteria 18181
335 Ga0590075_001533 3300059424 Bacteria 5754
336 Ga0590075_024064 3300059424 Bacteria 1527
337 Ga0590077_004422 3300059426 Bacteria 2887
338 Ga0590077_014818 3300059426 Bacteria 1625
339 Ga0501082_0000373 3300060353 Bacteria 39570
340 Ga0501082_0000885 3300060353 Bacteria 26463
341 Ga0501082_0000995 3300060353 Bacteria 25021
342 Ga0501082_0004138 3300060353 Bacteria 12673
343 Ga0501082_0108930 3300060353 Bacteria 2397
344 Ga0530510_0000660 3300061734 Bacteria 22310
345 Ga0530510_0001025 3300061734 Bacteria 18494
346 Ga0530510_0001360 3300061734 Bacteria 16343
347 Ga0530510_0002970 3300061734 Bacteria 11631
348 Ga0530510_0013681 3300061734 Bacteria 5711
349 2515853809 2515154155 Bacteria 7985436
350 2676476137 2675903058 Bacteria 6822861
351 2827633967 2827628540 Bacteria 6858585
352 8053949106 8053945823 Bacteria 8962862
353 Ga0081538_10010576
354 JGI25406J46586_10004756
355 JGI25406J46586_10005514
356 JGI25407J50210_10000828
357 JGI25407J50210_10011097
358 Ga0070689_100233711
359 Ga0070668_100031898
360 Ga0070668_100100729
361 Ga0070674_100170861
362 Ga0070674_100187643
363 Ga0070688_100042892
364 Ga0070714_100009656
365 Ga0070714_100023375
366 Ga0070714_100145744
367 Ga0070714_100185787
368 Ga0070713_100010859
369 Ga0070681_10232422
370 Ga0068867_100011507
371 Ga0070686_100010156
372 Ga0068855_100003723
373 Ga0068856_100235321
374 Ga0070702_100066485
375 Ga0068866_10001996
376 Ga0068858_100000024
377 Ga0081455_10001431
378 Ga0081455_10001651
379 Ga0081455_10025613
380 Ga0081455_10037051
381 Ga0081455_10048651
382 Ga0081455_10065236
383 Ga0081538_10000236
384 Ga0081538_10000356
385 Ga0081538_10001361
386 Ga0081538_10002317
387 Ga0081538_10003464
388 Ga0081538_10006351
389 Ga0081538_10008584
390 Ga0081538_10012138
391 Ga0081538_10013145
392 Ga0081538_10016863
393 Ga0081538_10035962
394 Ga0081538_10037202
395 Ga0081538_10044979
396 Ga0081538_10047572
397 Ga0081538_10054979
398 Ga0081538_10063139
399 Ga0081538_10071573
400 Ga0081538_10075367
401 Ga0081539_10004183
402 Ga0081539_10051041
403 Ga0070717_10038451
404 Ga0075363_100037445
405 Ga0075364_10002391
406 Ga0075427_10004601
407 Ga0075428_100008950
408 Ga0075428_100045597
409 Ga0075430_100005143
410 Ga0075430_100074765
411 Ga0075431_100003895
412 Ga0075431_100038084
413 Ga0075433_10012646
414 Ga0075434_100011818
415 Ga0075429_100000385
416 Ga0075429_100088671
417 Ga0075429_100146260
418 Ga0068865_100013921
419 Ga0105240_10007415
420 Ga0111539_10032153
421 Ga0111539_10146346
422 Ga0111539_10269890
423 Ga0111539_10476277
424 Ga0105247_10000670
425 Ga0114129_10003531
426 Ga0114129_10042126
427 Ga0105243_10009702
428 Ga0105243_10024883
429 Ga0105242_10004320
430 Ga0157370_10002635
431 Ga0157369_10002998
432 Ga0157375_10055418
433 Ga0157375_10172907
434 Ga0163163_10132584
435 Ga0157380_10138192
436 Ga0157379_10000203
437 Ga0163161_10147032
438 Ga0163161_10163563
439 Ga0207642_10034251
440 Ga0207710_10000110
441 Ga0207700_10025428
442 Ga0207664_10003968
443 Ga0207664_10073943
444 Ga0207706_10012248
445 Ga0207706_10355892
446 Ga0207709_10083765
447 Ga0207669_10057836
448 Ga0207704_10027875
449 Ga0207712_10031695
450 Ga0207712_10346933
451 Ga0207668_10100794
452 Ga0207703_10000005
453 Ga0207702_10182377
454 Ga0207648_10002212
455 Ga0207675_100031074
456 Ga0207675_100325721
457 Ga0207428_10003477
458 Ga0207428_10173412
459 Ga0307408_100142212
460 Ga0307405_10006448
461 Ga0307405_10055563
462 Ga0307413_10035241
463 Ga0307413_10035952
464 Ga0307410_10024520
465 Ga0307410_10119567
466 Ga0307407_10007443
467 Ga0307407_10072054
468 Ga0307407_10136641
469 Ga0307412_10020997
470 Ga0307412_10132204
471 Ga0307409_100009073
472 Ga0307409_100025191
473 Ga0307409_100035517
474 Ga0307409_100068948
475 Ga0307409_100165176
476 Ga0307409_100172445
477 Ga0307409_100236959
478 Ga0307416_100010503
479 Ga0307416_100019152
480 Ga0307416_100127103
481 Ga0307416_100247819
482 Ga0307416_100314499
483 Ga0307414_10016064
484 Ga0307414_10123379
485 Ga0307411_10002872
486 Ga0307411_10050172
487 Ga0307415_100000481
488 Ga0307415_100003365
489 Ga0307415_100042792
490 Ga0307415_100090600
491 Ga0395900_0082453
492 Ga0395900_0132596
493 Ga0395900_0133053
494 Ga0395900_0304030
495 Ga0395898_0044777
496 Ga0395905_0152973
497 Ga0395905_0156000
498 Ga0436364_0250852
499 Ga0436364_0485333
500 Ga0395901_0008666
501 Ga0395901_0041752
502 Ga0436365_0438688
503 Ga0439443_006091
504 Ga0439448_0000021
505 Ga0439448_0006639
506 Ga0439450_000049
507 Ga0439454_001623
508 Ga0439463_000076
509 Ga0439463_009741
510 Ga0450900_010832
511 Ga0450902_005893
512 Ga0439444_0005181
513 Ga0439464_0017712
514 Ga0439460_0000385
515 Ga0439460_0012877
516 Ga0439440_0001902
517 Ga0439440_0033798
518 Ga0466966_0065044
519 Ga0466961_0165873
520 Ga0466963_0010153
521 Ga0466963_0028985
522 Ga0466963_0217802
523 Ga0466968_0025238
524 Ga0466970_0087431
525 Ga0466957_0004676
526 Ga0466958_0002339
527 Ga0466958_0023230
528 Ga0466967_0003779
529 Ga0466967_0043979
530 Ga0495628_0116720
531 Ga0495630_0105593
532 Ga0495656_0033150
533 Ga0495636_0064251
534 Ga0495602_0064726
535 Ga0496101_0078495
536 Ga0496102_0132104
537 Ga0496103_0108222
538 Ga0496104_0046562
539 Ga0496105_0054184
540 Ga0496105_0095293
541 Ga0496106_0072425
542 Ga0496107_0145026
543 Ga0496108_0086510
544 Ga0496108_0118202
545 Ga0496110_0042277
546 Ga0496112_0001126
547 Ga0496113_0025861
548 Ga0496114_0199002
549 Ga0496119_0015420
550 Ga0496121_0013028
551 Ga0496126_0006979
552 Ga0496126_0069979
553 Ga0501031_0000360
554 Ga0501031_0001445
555 Ga0501031_0009955
556 Ga0501031_0072633
557 Ga0501032_0025993
558 Ga0501032_0038154
559 Ga0501032_0048288
560 Ga0501032_0056670
561 Ga0501033_0002712
562 Ga0501033_0006097
563 Ga0501033_0013842
564 Ga0501033_0055501
565 Ga0501036_0000272
566 Ga0501036_0000811
567 Ga0501036_0002196
568 Ga0501036_0005452
569 Ga0501036_0019121
570 Ga0501037_0003858
571 Ga0501037_0007969
572 Ga0501037_0012669
573 Ga0501037_0016808
574 Ga0501038_0001666
575 Ga0501038_0004217
576 Ga0501038_0005901
577 Ga0501039_0000197
578 Ga0501039_0000328
579 Ga0501039_0000551
580 Ga0501039_0000614
581 Ga0501039_0003245
582 Ga0501040_0000209
583 Ga0501040_0000337
584 Ga0501040_0000816
585 Ga0501040_0004731
586 Ga0501040_0121270
587 Ga0501041_0000263
588 Ga0501041_0000411
589 Ga0501041_0001603
590 Ga0501041_0002586
591 Ga0501041_0008899
592 Ga0501042_0000007
593 Ga0501042_0000210
594 Ga0501042_0000908
595 Ga0501042_0001769
596 Ga0501042_0023653
597 Ga0501042_0133867
598 Ga0501043_0032517
599 Ga0501046_0000880
600 Ga0501046_0001199
601 Ga0501046_0002536
602 Ga0501046_0006739
603 Ga0501047_0158936
604 Ga0501048_0000320
605 Ga0501048_0004348
606 Ga0501048_0004595
607 Ga0501048_0007280
608 Ga0501068_0055420
609 Ga0501068_0065598
610 Ga0501068_0123998
611 Ga0501068_0128078
612 Ga0501069_0027922
613 Ga0501069_0057691
614 Ga0501070_0006780
615 Ga0501070_0123256
616 Ga0501070_0323990
617 Ga0501071_0001132
618 Ga0501071_0001636
619 Ga0501071_0001912
620 Ga0501071_0041810
621 Ga0501072_0000195
622 Ga0501072_0001730
623 Ga0501072_0002194
624 Ga0501074_0000297
625 Ga0501074_0003483
626 Ga0501074_0003547
627 Ga0501074_0113766
628 Ga0501075_0000331
629 Ga0501075_0000497
630 Ga0501075_0001600
631 Ga0501075_0002302
632 Ga0501075_0041367
633 Ga0501075_0041403
634 Ga0501076_0000192
635 Ga0501076_0000217
636 Ga0501076_0001964
637 Ga0501076_0005836
638 Ga0501076_0041306
639 Ga0501077_0000856
640 Ga0501077_0000981
641 Ga0501077_0001573
642 Ga0501077_0004590
643 Ga0501257_000733
644 Ga0501079_0000200
645 Ga0501079_0001415
646 Ga0501079_0002777
647 Ga0501079_0003311
648 Ga0501079_0020741
649 Ga0501079_0030515
650 Ga0501080_0012876
651 Ga0501080_0179289
652 Ga0501081_0000172
653 Ga0501081_0000413
654 Ga0501081_0001415
655 Ga0501081_0004402
656 Ga0501081_0010814
657 Ga0501083_0052560
658 Ga0501035_0044731
659 Ga0501035_0122302
660 Ga0501044_0144360
661 Ga0501044_0294620
662 Ga0501045_0000015
663 Ga0501045_0001887
664 Ga0501045_0005230
665 Ga0501045_0006021
666 Ga0501045_0007307
667 nmdc:mga00v17_2492_c1
668 nmdc:mga05p37_13827_c1
669 nmdc:mga05p37_2063_c1
670 nmdc:mga09592_32569_c1
671 nmdc:mga09592_408_c1
672 nmdc:mga09592_98081_c1
673 nmdc:mga0qj67_182144_c1
674 nmdc:mga0qj67_525_c1
675 nmdc:mga06r32_14442_c1
676 nmdc:mga06r32_246372_c1
677 nmdc:mga08y16_5342_c1
678 nmdc:mga08y16_64085_c1
679 nmdc:mga0a205_2076_c1
680 nmdc:mga0a205_32490_c1
681 Ga0500616_0001307
682 Ga0501084_0000298
683 Ga0501084_0000331
684 Ga0501084_0000576
685 Ga0501084_0001074
686 Ga0501084_0001561
687 Ga0590075_001533
688 Ga0590075_024064
689 Ga0590077_004422
690 Ga0590077_014818
691 Ga0501082_0000373
692 Ga0501082_0000885
693 Ga0501082_0000995
694 Ga0501082_0004138
695 Ga0501082_0108930
696 Ga0530510_0000660
697 Ga0530510_0001025
698 Ga0530510_0001360
699 Ga0530510_0002970
700 Ga0530510_0013681
701 2515853809
702 2676476137
703 2827633967
704 8053949106

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07730

HisKA_3

Histidine kinase

210

276

0.98

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

321

425

0.88

PF13581

HATPase_c_2

Histidine kinase-like ATPase domain

325

410

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gt8-assembly1.cif.gz_A crystal structure of the catalytic and atp-binding domain from vras in complex with adp 0.836 254 388
3ehg-assembly1.cif.gz_A crystal structure of the atp-binding domain of desk in complex with atp 0.8289 253 385
8sbm-assembly2.cif.gz_B crystal structure of the wild-type catalytic atp-binding domain of mtb doss 0.8241 251 388
8sbm-assembly1.cif.gz_A crystal structure of the wild-type catalytic atp-binding domain of mtb doss 0.8204 251 388
8sbm-assembly2.cif.gz_B crystal structure of the wild-type catalytic atp-binding domain of mtb doss 0.8122 251 388
ID Description Score Start End Superfamily
af_P0AFA2_454_587_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8488 253 388 3.30.565.10
af_Q2FVM6_212_344_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.836 246 386 3.30.565.10
4gt8A00 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.836 254 388 3.30.565.10
af_Q2FX96_238_370_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.822 246 387 3.30.565.10
3zxoB00 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8194 251 387 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A7C2PKX3-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8501 271 387 GO:0000160
GO:0016301
AF-A0A7C2PKX3-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8283 271 387 GO:0000160
GO:0016301
AF-A0A073INV9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8281 245 390 GO:0000160
GO:0016301
AF-A0A6G3TRA1-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8124 250 391 GO:0000160
GO:0016301
AF-A0A534Y434-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8122 250 390 GO:0000160
GO:0005886
GO:0016301

Map