F418657

General Info

Members Datasets Scaffolds Average Seq Length
351 218 702 158

Family's Representative Sequence

Representative Sequence 3300025915|Ga0207693_10124125|Ga0207693_101241252
Length 169
Sequence MSGSGAPEVAPVEAEGLTLGIVATTWHAEITEALLARAVVAARACGVAEPTVVAQALTERHDAVVALGVVIRGGTPHFGYVCDAVTAGLTRVALDAGKPVGNGVLTCDTEEQARDRAGLPGSAEDKGWEATVAARAEDDWLSPAMISTEYFLPPTVIPLASAARTWPST

Samples

Sample ID Description Type Environment
1 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
105 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
106 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
107 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
108 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
109 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
110 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
111 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
114 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
122 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
123 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
124 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
133 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
134 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
135 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
136 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
137 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
138 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
139 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
140 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
141 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
142 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
143 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
144 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
145 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
146 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
147 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
148 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
149 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
150 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
151 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
152 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
153 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
168 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
169 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
170 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
173 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
175 2501939600 Micromonospora sp. L5 Isolate Unclassified
176 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
177 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
178 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
179 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
180 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
181 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
182 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
183 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
184 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
185 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
186 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
187 2855683550 Micromonospora sp. RP3T Isolate Unclassified
188 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
189 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
190 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
191 2858868258 Micromonospora sp. MH33 Isolate Unclassified
192 2858882152 Micromonospora noduli MED15 Isolate Nodule
193 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
194 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
195 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
196 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
197 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
198 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
199 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
200 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
201 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
202 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
203 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
204 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
205 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
206 2902582711 Micromonospora sp. AP08 Isolate Unclassified
207 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
208 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
209 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
210 649633069 Micromonospora sp. L5 Isolate Unclassified
211 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
212 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
213 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
214 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
215 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
216 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
217 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
218 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.32
Metatranscriptomes 1.14
Isolates 12.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.28
Nodule 1.71
Rhizoplane 1.71
Rhizosphere 79.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207693_10124125 3300025915 Bacteria 2029
2 JGI25406J46586_10003285 3300003203 Bacteria 7605
3 Ga0070658_10042657 3300005327 Bacteria 3664
4 Ga0070683_100020720 3300005329 Bacteria 5855
5 Ga0070683_100030639 3300005329 Bacteria 4886
6 Ga0068869_100016968 3300005334 Bacteria 4924
7 Ga0070680_100164616 3300005336 Bacteria 1864
8 Ga0070682_100092525 3300005337 Bacteria 1981
9 Ga0068868_100017047 3300005338 Bacteria 5405
10 Ga0070691_10595818 3300005341 Bacteria 652
11 Ga0070687_100110793 3300005343 Bacteria 1553
12 Ga0070687_100992003 3300005343 Bacteria 608
13 Ga0070661_100009536 3300005344 Bacteria 6728
14 Ga0070661_100062247 3300005344 Bacteria 2740
15 Ga0070692_10808795 3300005345 Bacteria 641
16 Ga0070668_100188315 3300005347 Bacteria 1689
17 Ga0070668_100271319 3300005347 Bacteria 1414
18 Ga0070675_100000432 3300005354 Bacteria 28465
19 Ga0070659_100018376 3300005366 Bacteria 5277
20 Ga0070659_100099171 3300005366 Bacteria 2343
21 Ga0070714_100440387 3300005435 Bacteria 1237
22 Ga0070713_100181025 3300005436 Bacteria 1894
23 Ga0070701_10301501 3300005438 Bacteria 985
24 Ga0070705_101562639 3300005440 Bacteria 554
25 Ga0070700_100040473 3300005441 Bacteria 2853
26 Ga0070663_100018872 3300005455 Bacteria 4533
27 Ga0070678_100567816 3300005456 Bacteria 1009
28 Ga0070662_100004777 3300005457 Bacteria 8586
29 Ga0070681_10298756 3300005458 Bacteria 1520
30 Ga0068867_100711427 3300005459 Bacteria 887
31 Ga0070706_100977275 3300005467 Bacteria 781
32 Ga0070684_100030724 3300005535 Bacteria 4567
33 Ga0070684_100062261 3300005535 Bacteria 3268
34 Ga0070684_100085027 3300005535 Bacteria 2805
35 Ga0070665_100992634 3300005548 Bacteria 852
36 Ga0070704_101127432 3300005549 Bacteria 713
37 Ga0070704_101610061 3300005549 Bacteria 599
38 Ga0068855_100455722 3300005563 Bacteria 1395
39 Ga0070664_100002893 3300005564 Bacteria 13897
40 Ga0070664_100024877 3300005564 Bacteria 4960
41 Ga0070664_100490232 3300005564 Bacteria 1132
42 Ga0068857_100014513 3300005577 Bacteria 6872
43 Ga0068857_100140588 3300005577 Bacteria 2182
44 Ga0068857_100353570 3300005577 Bacteria 1361
45 Ga0068857_101309950 3300005577 Bacteria 703
46 Ga0068856_100293404 3300005614 Bacteria 1643
47 Ga0068859_100088771 3300005617 Bacteria 3141
48 Ga0068864_100049573 3300005618 Bacteria 3613
49 Ga0068864_100107844 3300005618 Bacteria 2478
50 Ga0068864_100116283 3300005618 Bacteria 2386
51 Ga0068864_100245845 3300005618 Bacteria 1659
52 Ga0068861_100266927 3300005719 Bacteria 1468
53 Ga0068863_100010575 3300005841 Bacteria 8958
54 Ga0068863_101150700 3300005841 Bacteria 781
55 Ga0068858_100147539 3300005842 Bacteria 2210
56 Ga0068858_100489230 3300005842 Bacteria 1188
57 Ga0068860_101014809 3300005843 Bacteria 848
58 Ga0068862_100126567 3300005844 Bacteria 2256
59 Ga0081539_10001842 3300005985 Bacteria 33429
60 Ga0081539_10004135 3300005985 Bacteria 16512
61 Ga0081539_10004900 3300005985 Bacteria 14269
62 Ga0081539_10060487 3300005985 Bacteria 2080
63 Ga0075364_10104054 3300006051 Bacteria 1891
64 Ga0075428_100004276 3300006844 Bacteria 15722
65 Ga0075428_100116157 3300006844 Bacteria 2915
66 Ga0075428_100281164 3300006844 Bacteria 1790
67 Ga0075428_100372124 3300006844 Bacteria 1532
68 Ga0075428_100987270 3300006844 Bacteria 892
69 Ga0075430_100003387 3300006846 Bacteria 13340
70 Ga0075430_100004679 3300006846 Bacteria 11505
71 Ga0075430_100532921 3300006846 Bacteria 969
72 Ga0075430_100619242 3300006846 Bacteria 893
73 Ga0075430_100764885 3300006846 Bacteria 796
74 Ga0075431_100003257 3300006847 Bacteria 15722
75 Ga0075431_100050666 3300006847 Bacteria 4280
76 Ga0075431_100198189 3300006847 Bacteria 2055
77 Ga0075431_100357249 3300006847 Bacteria 1468
78 Ga0075431_100666759 3300006847 Bacteria 1020
79 Ga0075429_100000244 3300006880 Bacteria 37496
80 Ga0075429_100002140 3300006880 Bacteria 16477
81 Ga0075429_100048245 3300006880 Bacteria 3704
82 Ga0075429_100145749 3300006880 Bacteria 2072
83 Ga0075429_100440954 3300006880 Bacteria 1141
84 Ga0068865_101298385 3300006881 Bacteria 647
85 Ga0097620_100088774 3300006931 Bacteria 3141
86 Ga0111539_10024618 3300009094 Bacteria 7385
87 Ga0111539_10764553 3300009094 Bacteria 1124
88 Ga0111539_11049324 3300009094 Bacteria 947
89 Ga0105245_10017382 3300009098 Bacteria 6273
90 Ga0114129_10000130 3300009147 Bacteria 77049
91 Ga0114129_10000723 3300009147 Bacteria 41902
92 Ga0114129_10011004 3300009147 Bacteria 12889
93 Ga0114129_10035890 3300009147 Bacteria 7001
94 Ga0114129_10348688 3300009147 Bacteria 1962
95 Ga0114129_10803584 3300009147 Bacteria 1199
96 Ga0114129_11444529 3300009147 Bacteria 847
97 Ga0114129_12231637 3300009147 Bacteria 658
98 Ga0105248_10145430 3300009177 Bacteria 2675
99 Ga0105239_10266580 3300010375 Bacteria 1926
100 Ga0105239_11856823 3300010375 Bacteria 698
101 Ga0157369_10023194 3300013105 Bacteria 6914
102 Ga0163162_11469572 3300013306 Bacteria 776
103 Ga0157372_10409240 3300013307 Bacteria 1581
104 Ga0157375_11234650 3300013308 Bacteria 877
105 Ga0163163_10447352 3300014325 Bacteria 1352
106 Ga0163163_10564679 3300014325 Bacteria 1201
107 Ga0163163_11440505 3300014325 Bacteria 750
108 Ga0163163_11453930 3300014325 Bacteria 747
109 Ga0157377_10000412 3300014745 Bacteria 18566
110 Ga0157376_11042347 3300014969 Bacteria 842
111 Ga0206356_11420602 3300020070 Bacteria 5401
112 Ga0206354_10324049 3300020081 Bacteria 1374
113 Ga0206353_10413276 3300020082 Bacteria 4114
114 Ga0224712_10017953 3300022467 Bacteria 2355
115 Ga0207643_10073613 3300025908 Bacteria 1969
116 Ga0207705_11281920 3300025909 Bacteria 560
117 Ga0207684_11262907 3300025910 Bacteria 609
118 Ga0207707_10421547 3300025912 Bacteria 1144
119 Ga0207660_10351877 3300025917 Bacteria 1181
120 Ga0207649_10006051 3300025920 Bacteria 6567
121 Ga0207649_10138715 3300025920 Bacteria 1661
122 Ga0207652_10877839 3300025921 Bacteria 793
123 Ga0207681_10105626 3300025923 Bacteria 2039
124 Ga0207650_10267374 3300025925 Bacteria 1389
125 Ga0207659_10006647 3300025926 Bacteria 7103
126 Ga0207687_10003225 3300025927 Bacteria 11043
127 Ga0207664_10875974 3300025929 Bacteria 807
128 Ga0207690_10060220 3300025932 Bacteria 2576
129 Ga0207690_10202388 3300025932 Bacteria 1509
130 Ga0207706_10005138 3300025933 Bacteria 12214
131 Ga0207669_11117105 3300025937 Bacteria 666
132 Ga0207665_10585694 3300025939 Bacteria 870
133 Ga0207711_10124377 3300025941 Bacteria 2306
134 Ga0207689_10003272 3300025942 Bacteria 14852
135 Ga0207661_10001793 3300025944 Bacteria 14674
136 Ga0207679_10008197 3300025945 Bacteria 6650
137 Ga0207679_10145515 3300025945 Bacteria 1921
138 Ga0207679_10198156 3300025945 Bacteria 1675
139 Ga0207667_10301291 3300025949 Bacteria 1638
140 Ga0207712_10039490 3300025961 Bacteria 3234
141 Ga0207668_10366940 3300025972 Bacteria 1208
142 Ga0207677_10014456 3300026023 Bacteria 4611
143 Ga0207703_10200516 3300026035 Bacteria 1773
144 Ga0207678_10004168 3300026067 Bacteria 12977
145 Ga0207708_10117613 3300026075 Bacteria 2069
146 Ga0207708_11042847 3300026075 Bacteria 712
147 Ga0207702_10277961 3300026078 Bacteria 1582
148 Ga0207641_11692145 3300026088 Bacteria 634
149 Ga0207648_10887864 3300026089 Bacteria 832
150 Ga0207676_10109817 3300026095 Bacteria 2306
151 Ga0207674_10013397 3300026116 Bacteria 9102
152 Ga0207674_10089554 3300026116 Bacteria 3070
153 Ga0207674_10123288 3300026116 Bacteria 2557
154 Ga0207674_10144437 3300026116 Bacteria 2338
155 Ga0207674_11026163 3300026116 Bacteria 794
156 Ga0207675_100073191 3300026118 Bacteria 3206
157 Ga0207683_10339539 3300026121 Bacteria 1377
158 Ga0207428_10057108 3300027907 Bacteria 3099
159 Ga0268266_10123867 3300028379 Bacteria 2304
160 Ga0268266_10488256 3300028379 Bacteria 1175
161 Ga0268265_10100874 3300028380 Bacteria 2331
162 Ga0307517_10095286 3300028786 Bacteria 2396
163 Ga0307515_10000182 3300028794 Bacteria 154288
164 Ga0307515_10007109 3300028794 Bacteria 22231
165 Ga0307515_10009461 3300028794 Bacteria 18832
166 Ga0307515_10041850 3300028794 Bacteria 7189
167 Ga0307515_10103449 3300028794 Bacteria 3413
168 Ga0307511_10199495 3300030521 Bacteria 1042
169 Ga0307512_10004147 3300030522 Bacteria 16071
170 Ga0307512_10004201 3300030522 Bacteria 15934
171 Ga0316177_1182040 3300030731 Bacteria 929
172 Ga0316178_1044905 3300030735 Bacteria 771
173 Ga0316182_1226613 3300030745 Bacteria 1562
174 Ga0265328_10062321 3300031239 Bacteria 1369
175 Ga0307513_10000009 3300031456 Bacteria 403893
176 Ga0307513_10005579 3300031456 Bacteria 16592
177 Ga0307513_10010282 3300031456 Bacteria 11746
178 Ga0307513_10172856 3300031456 Bacteria 2035
179 Ga0307513_10518707 3300031456 Bacteria 907
180 Ga0307509_10146413 3300031507 Bacteria 2287
181 Ga0307408_100964998 3300031548 Bacteria 784
182 Ga0307408_101079479 3300031548 Bacteria 744
183 Ga0307508_10030164 3300031616 Bacteria 4900
184 Ga0307508_10042150 3300031616 Bacteria 4096
185 Ga0307508_10418339 3300031616 Bacteria 932
186 Ga0307516_10000395 3300031730 Bacteria 56947
187 Ga0307516_10035436 3300031730 Bacteria 5007
188 Ga0307405_10534427 3300031731 Bacteria 946
189 Ga0307413_10144954 3300031824 Bacteria 1647
190 Ga0307413_10196413 3300031824 Bacteria 1453
191 Ga0307518_10339515 3300031838 Bacteria 883
192 Ga0307410_10145419 3300031852 Bacteria 1759
193 Ga0307410_10265674 3300031852 Bacteria 1340
194 Ga0307410_10443772 3300031852 Bacteria 1057
195 Ga0307410_10447050 3300031852 Bacteria 1053
196 Ga0307410_10584431 3300031852 Bacteria 930
197 Ga0307410_10967111 3300031852 Bacteria 733
198 Ga0326468_10000125 3300031889 Bacteria 7203
199 Ga0307406_10017927 3300031901 Bacteria 4130
200 Ga0307406_10195706 3300031901 Bacteria 1484
201 Ga0307406_10207631 3300031901 Bacteria 1447
202 Ga0307406_10248741 3300031901 Bacteria 1338
203 Ga0307406_10339862 3300031901 Bacteria 1169
204 Ga0307406_10525261 3300031901 Bacteria 964
205 Ga0307407_10225086 3300031903 Bacteria 1271
206 Ga0307407_10235075 3300031903 Bacteria 1247
207 Ga0307407_10701588 3300031903 Bacteria 762
208 Ga0307407_10717138 3300031903 Bacteria 755
209 Ga0307412_10891406 3300031911 Bacteria 779
210 Ga0307409_100026888 3300031995 Bacteria 4067
211 Ga0307409_100059069 3300031995 Bacteria 2982
212 Ga0307409_100703769 3300031995 Bacteria 1010
213 Ga0307409_100744722 3300031995 Bacteria 983
214 Ga0307416_100072570 3300032002 Bacteria 2866
215 Ga0307416_100086292 3300032002 Bacteria 2675
216 Ga0307416_100103756 3300032002 Bacteria 2483
217 Ga0307416_100174441 3300032002 Bacteria 2006
218 Ga0307416_100985739 3300032002 Bacteria 945
219 Ga0307416_102442792 3300032002 Bacteria 622
220 Ga0307416_102821294 3300032002 Bacteria 581
221 Ga0307411_10403415 3300032005 Bacteria 1131
222 Ga0307411_10852344 3300032005 Bacteria 806
223 Ga0307411_11229113 3300032005 Bacteria 680
224 Ga0307415_100012953 3300032126 Bacteria 4848
225 Ga0307415_100045374 3300032126 Bacteria 2946
226 Ga0307415_100066819 3300032126 Bacteria 2511
227 Ga0307415_100142397 3300032126 Bacteria 1833
228 Ga0307415_100277516 3300032126 Bacteria 1376
229 Ga0307415_100367139 3300032126 Bacteria 1217
230 Ga0307415_100649318 3300032126 Bacteria 946
231 Ga0307415_100665236 3300032126 Bacteria 935
232 Ga0307415_100819485 3300032126 Bacteria 851
233 Ga0307415_100913323 3300032126 Bacteria 810
234 Ga0307510_10139986 3300033180 Bacteria 2066
235 Ga0395899_0025125 3300037312 Bacteria 4498
236 Ga0395900_0003750 3300037418 Bacteria 16323
237 Ga0395898_0046306 3300037466 Bacteria 4272
238 Ga0395905_0001026 3300037471 Bacteria 35609
239 Ga0395905_0199937 3300037471 Bacteria 1874
240 Ga0395901_0024044 3300038443 Bacteria 6249
241 Ga0395901_0316201 3300038443 Bacteria 1616
242 Ga0439436_0017607 3300041404 Bacteria 2138
243 Ga0439438_022081 3300041405 Bacteria 1769
244 Ga0439439_0008503 3300041406 Bacteria 2426
245 Ga0439453_0145712 3300041408 Bacteria 559
246 Ga0451802_1510515 3300041460 Bacteria 516
247 Ga0439449_0001912 3300042007 Bacteria 8175
248 Ga0439457_003743 3300042014 Bacteria 4088
249 Ga0450908_076539 3300042184 Bacteria 598
250 Ga0466963_0688402 3300044694 Bacteria 721
251 Ga0466964_0052688 3300044706 Bacteria 1673
252 Ga0466960_0396578 3300044901 Bacteria 794
253 Ga0466960_0682506 3300044901 Bacteria 615
254 Ga0466967_0052592 3300045976 Bacteria 3576
255 Ga0466967_0114925 3300045976 Bacteria 2478
256 Ga0466967_1161643 3300045976 Bacteria 769
257 Ga0495638_0371129 3300046460 Bacteria 750
258 Ga0495639_0239965 3300046475 Bacteria 894
259 Ga0495594_0021940 3300046499 Bacteria 3412
260 Ga0495594_0045545 3300046499 Bacteria 2408
261 Ga0495594_0045748 3300046499 Bacteria 2403
262 Ga0495606_0010018 3300046507 Bacteria 7925
263 Ga0495632_0140905 3300046519 Bacteria 1119
264 Ga0495668_0000477 3300046616 Bacteria 50176
265 Ga0495625_0000969 3300046660 Bacteria 38144
266 Ga0495626_0000234 3300048091 Bacteria 65050
267 Ga0496102_1153426 3300048905 Bacteria 694
268 Ga0496104_0055670 3300048907 Bacteria 3740
269 Ga0496108_0101384 3300048911 Bacteria 2456
270 Ga0496110_0552298 3300048913 Bacteria 1047
271 Ga0496112_0059211 3300048915 Bacteria 3773
272 Ga0496125_0248603 3300048928 Bacteria 1124
273 Ga0496126_0978783 3300048929 Bacteria 636
274 Ga0501048_1061433 3300049582 Bacteria 583
275 Ga0501068_0696260 3300049584 Bacteria 664
276 nmdc:mga05p37_1298899_c1 3300050507 Bacteria 742
277 nmdc:mga05p37_17439_c1 3300050507 Bacteria 8666
278 nmdc:mga05p37_3122_c1 3300050507 Bacteria 19253
279 nmdc:mga05p37_40844_c1 3300050507 Bacteria 5696
280 nmdc:mga05p37_5990_c1 3300050507 Bacteria 14313
281 nmdc:mga09592_172638_c1 3300050508 Bacteria 1869
282 nmdc:mga09592_17965_c1 3300050508 Bacteria 5795
283 nmdc:mga09592_295031_c1 3300050508 Bacteria 1405
284 nmdc:mga09592_3885_c1 3300050508 Bacteria 12036
285 nmdc:mga09592_43353_c1 3300050508 Bacteria 3787
286 nmdc:mga09592_711117_c1 3300050508 Bacteria 854
287 nmdc:mga09592_794_c1 3300050508 Bacteria 24428
288 nmdc:mga0qj67_10416_c1 3300050509 Bacteria 6948
289 nmdc:mga0qj67_1441_c1 3300050509 Bacteria 16661
290 nmdc:mga0qj67_193_c1 3300050509 Bacteria 41569
291 nmdc:mga0qj67_234662_c1 3300050509 Bacteria 1488
292 nmdc:mga0qj67_492436_c1 3300050509 Bacteria 986
293 nmdc:mga06r32_14875_c1 3300050510 Bacteria 5457
294 nmdc:mga06r32_1527037_c1 3300050510 Bacteria 608
295 nmdc:mga06r32_275_c1 3300050510 Bacteria 42703
296 nmdc:mga06r32_51771_c1 3300050510 Bacteria 3931
297 nmdc:mga06r32_645956_c1 3300050510 Bacteria 1026
298 nmdc:mga08y16_1159274_c1 3300050511 Bacteria 745
299 nmdc:mga08y16_16770_c1 3300050511 Bacteria 7710
300 Ga0500644_0151046 3300053088 Bacteria 931
301 Ga0500651_0421014 3300053093 Bacteria 747
302 Ga0500650_0042547 3300053098 Bacteria 2099
303 Ga0500594_0047614 3300053118 Bacteria 1196
304 Ga0500559_0020673 3300053136 Bacteria 2784
305 Ga0500600_0098422 3300053149 Bacteria 1547
306 Ga0500633_0038695 3300053160 Bacteria 1590
307 Ga0530510_0538840 3300061734 Bacteria 886
308 2501942807 2501939600 Bacteria 6907073
309 2515494896 2515154088 Bacteria 5526283
310 2515718900 2515154129 Bacteria 5584369
311 2515755559 2515154137 Bacteria 5711575
312 2516083112 2515154202 Bacteria 5471270
313 2516090198 2515154203 Bacteria 5458536
314 2623588003 2622736626 Bacteria 7181580
315 2772643635 2772190715 Bacteria 6959372
316 2831936626 2831935698 Bacteria 5963223
317 2832008537 2832004796 Bacteria 6538017
318 2855675194 2855670206 Bacteria 7120389
319 2855681973 2855676851 Bacteria 7063653
320 2855686852 2855683550 Bacteria 7134265
321 2856862032 2856858025 Bacteria 7255264
322 2857289204 2857288857 Bacteria 7189066
323 2858850026 2858848962 Bacteria 6963058
324 2858875871 2858868258 Bacteria 7683772
325 2858883462 2858882152 Bacteria 7230291
326 2858891953 2858888857 Bacteria 7060307
327 2858899358 2858895516 Bacteria 7378898
328 2858907822 2858902515 Bacteria 7086037
329 2866065329 2866065130 Bacteria 6518152
330 2867307799 2867302475 Bacteria 7087181
331 2867320118 2867319477 Bacteria 7069771
332 2867508623 2867507094 Bacteria 6506033
333 2869050843 2869048445 Bacteria 6875584
334 2869067968 2869061728 Bacteria 7112407
335 2869073421 2869068681 Bacteria 7205615
336 2880492055 2880489317 Bacteria 7096270
337 2880500243 2880495981 Bacteria 7340502
338 2887486825 2887478801 Bacteria 8972725
339 2902586672 2902582711 Bacteria 6187705
340 2929222135 2929219909 Bacteria 6984360
341 2929228794 2929226422 Bacteria 7248583
342 2996227960 2996221748 Bacteria 6799777
343 649812631 649633069 Bacteria 6962533
344 8003832019 8003830390 Bacteria 6541657
345 8003860407 8003856774 Bacteria 7675274
346 8003876242 8003870546 Bacteria 7396674
347 8054706788 8054704163 Bacteria 7247792
348 8054731771 8054727385 Bacteria 7558670
349 8054738917 8054734606 Bacteria 6947278
350 8055416311 8055412473 Bacteria 6257500
351 8056059341 8056054917 Bacteria 5736694
352 Ga0207693_10124125
353 JGI25406J46586_10003285
354 Ga0070658_10042657
355 Ga0070683_100020720
356 Ga0070683_100030639
357 Ga0068869_100016968
358 Ga0070680_100164616
359 Ga0070682_100092525
360 Ga0068868_100017047
361 Ga0070691_10595818
362 Ga0070687_100110793
363 Ga0070687_100992003
364 Ga0070661_100009536
365 Ga0070661_100062247
366 Ga0070692_10808795
367 Ga0070668_100188315
368 Ga0070668_100271319
369 Ga0070675_100000432
370 Ga0070659_100018376
371 Ga0070659_100099171
372 Ga0070714_100440387
373 Ga0070713_100181025
374 Ga0070701_10301501
375 Ga0070705_101562639
376 Ga0070700_100040473
377 Ga0070663_100018872
378 Ga0070678_100567816
379 Ga0070662_100004777
380 Ga0070681_10298756
381 Ga0068867_100711427
382 Ga0070706_100977275
383 Ga0070684_100030724
384 Ga0070684_100062261
385 Ga0070684_100085027
386 Ga0070665_100992634
387 Ga0070704_101127432
388 Ga0070704_101610061
389 Ga0068855_100455722
390 Ga0070664_100002893
391 Ga0070664_100024877
392 Ga0070664_100490232
393 Ga0068857_100014513
394 Ga0068857_100140588
395 Ga0068857_100353570
396 Ga0068857_101309950
397 Ga0068856_100293404
398 Ga0068859_100088771
399 Ga0068864_100049573
400 Ga0068864_100107844
401 Ga0068864_100116283
402 Ga0068864_100245845
403 Ga0068861_100266927
404 Ga0068863_100010575
405 Ga0068863_101150700
406 Ga0068858_100147539
407 Ga0068858_100489230
408 Ga0068860_101014809
409 Ga0068862_100126567
410 Ga0081539_10001842
411 Ga0081539_10004135
412 Ga0081539_10004900
413 Ga0081539_10060487
414 Ga0075364_10104054
415 Ga0075428_100004276
416 Ga0075428_100116157
417 Ga0075428_100281164
418 Ga0075428_100372124
419 Ga0075428_100987270
420 Ga0075430_100003387
421 Ga0075430_100004679
422 Ga0075430_100532921
423 Ga0075430_100619242
424 Ga0075430_100764885
425 Ga0075431_100003257
426 Ga0075431_100050666
427 Ga0075431_100198189
428 Ga0075431_100357249
429 Ga0075431_100666759
430 Ga0075429_100000244
431 Ga0075429_100002140
432 Ga0075429_100048245
433 Ga0075429_100145749
434 Ga0075429_100440954
435 Ga0068865_101298385
436 Ga0097620_100088774
437 Ga0111539_10024618
438 Ga0111539_10764553
439 Ga0111539_11049324
440 Ga0105245_10017382
441 Ga0114129_10000130
442 Ga0114129_10000723
443 Ga0114129_10011004
444 Ga0114129_10035890
445 Ga0114129_10348688
446 Ga0114129_10803584
447 Ga0114129_11444529
448 Ga0114129_12231637
449 Ga0105248_10145430
450 Ga0105239_10266580
451 Ga0105239_11856823
452 Ga0157369_10023194
453 Ga0163162_11469572
454 Ga0157372_10409240
455 Ga0157375_11234650
456 Ga0163163_10447352
457 Ga0163163_10564679
458 Ga0163163_11440505
459 Ga0163163_11453930
460 Ga0157377_10000412
461 Ga0157376_11042347
462 Ga0206356_11420602
463 Ga0206354_10324049
464 Ga0206353_10413276
465 Ga0224712_10017953
466 Ga0207643_10073613
467 Ga0207705_11281920
468 Ga0207684_11262907
469 Ga0207707_10421547
470 Ga0207660_10351877
471 Ga0207649_10006051
472 Ga0207649_10138715
473 Ga0207652_10877839
474 Ga0207681_10105626
475 Ga0207650_10267374
476 Ga0207659_10006647
477 Ga0207687_10003225
478 Ga0207664_10875974
479 Ga0207690_10060220
480 Ga0207690_10202388
481 Ga0207706_10005138
482 Ga0207669_11117105
483 Ga0207665_10585694
484 Ga0207711_10124377
485 Ga0207689_10003272
486 Ga0207661_10001793
487 Ga0207679_10008197
488 Ga0207679_10145515
489 Ga0207679_10198156
490 Ga0207667_10301291
491 Ga0207712_10039490
492 Ga0207668_10366940
493 Ga0207677_10014456
494 Ga0207703_10200516
495 Ga0207678_10004168
496 Ga0207708_10117613
497 Ga0207708_11042847
498 Ga0207702_10277961
499 Ga0207641_11692145
500 Ga0207648_10887864
501 Ga0207676_10109817
502 Ga0207674_10013397
503 Ga0207674_10089554
504 Ga0207674_10123288
505 Ga0207674_10144437
506 Ga0207674_11026163
507 Ga0207675_100073191
508 Ga0207683_10339539
509 Ga0207428_10057108
510 Ga0268266_10123867
511 Ga0268266_10488256
512 Ga0268265_10100874
513 Ga0307517_10095286
514 Ga0307515_10000182
515 Ga0307515_10007109
516 Ga0307515_10009461
517 Ga0307515_10041850
518 Ga0307515_10103449
519 Ga0307511_10199495
520 Ga0307512_10004147
521 Ga0307512_10004201
522 Ga0316177_1182040
523 Ga0316178_1044905
524 Ga0316182_1226613
525 Ga0265328_10062321
526 Ga0307513_10000009
527 Ga0307513_10005579
528 Ga0307513_10010282
529 Ga0307513_10172856
530 Ga0307513_10518707
531 Ga0307509_10146413
532 Ga0307408_100964998
533 Ga0307408_101079479
534 Ga0307508_10030164
535 Ga0307508_10042150
536 Ga0307508_10418339
537 Ga0307516_10000395
538 Ga0307516_10035436
539 Ga0307405_10534427
540 Ga0307413_10144954
541 Ga0307413_10196413
542 Ga0307518_10339515
543 Ga0307410_10145419
544 Ga0307410_10265674
545 Ga0307410_10443772
546 Ga0307410_10447050
547 Ga0307410_10584431
548 Ga0307410_10967111
549 Ga0326468_10000125
550 Ga0307406_10017927
551 Ga0307406_10195706
552 Ga0307406_10207631
553 Ga0307406_10248741
554 Ga0307406_10339862
555 Ga0307406_10525261
556 Ga0307407_10225086
557 Ga0307407_10235075
558 Ga0307407_10701588
559 Ga0307407_10717138
560 Ga0307412_10891406
561 Ga0307409_100026888
562 Ga0307409_100059069
563 Ga0307409_100703769
564 Ga0307409_100744722
565 Ga0307416_100072570
566 Ga0307416_100086292
567 Ga0307416_100103756
568 Ga0307416_100174441
569 Ga0307416_100985739
570 Ga0307416_102442792
571 Ga0307416_102821294
572 Ga0307411_10403415
573 Ga0307411_10852344
574 Ga0307411_11229113
575 Ga0307415_100012953
576 Ga0307415_100045374
577 Ga0307415_100066819
578 Ga0307415_100142397
579 Ga0307415_100277516
580 Ga0307415_100367139
581 Ga0307415_100649318
582 Ga0307415_100665236
583 Ga0307415_100819485
584 Ga0307415_100913323
585 Ga0307510_10139986
586 Ga0395899_0025125
587 Ga0395900_0003750
588 Ga0395898_0046306
589 Ga0395905_0001026
590 Ga0395905_0199937
591 Ga0395901_0024044
592 Ga0395901_0316201
593 Ga0439436_0017607
594 Ga0439438_022081
595 Ga0439439_0008503
596 Ga0439453_0145712
597 Ga0451802_1510515
598 Ga0439449_0001912
599 Ga0439457_003743
600 Ga0450908_076539
601 Ga0466963_0688402
602 Ga0466964_0052688
603 Ga0466960_0396578
604 Ga0466960_0682506
605 Ga0466967_0052592
606 Ga0466967_0114925
607 Ga0466967_1161643
608 Ga0495638_0371129
609 Ga0495639_0239965
610 Ga0495594_0021940
611 Ga0495594_0045545
612 Ga0495594_0045748
613 Ga0495606_0010018
614 Ga0495632_0140905
615 Ga0495668_0000477
616 Ga0495625_0000969
617 Ga0495626_0000234
618 Ga0496102_1153426
619 Ga0496104_0055670
620 Ga0496108_0101384
621 Ga0496110_0552298
622 Ga0496112_0059211
623 Ga0496125_0248603
624 Ga0496126_0978783
625 Ga0501048_1061433
626 Ga0501068_0696260
627 nmdc:mga05p37_1298899_c1
628 nmdc:mga05p37_17439_c1
629 nmdc:mga05p37_3122_c1
630 nmdc:mga05p37_40844_c1
631 nmdc:mga05p37_5990_c1
632 nmdc:mga09592_172638_c1
633 nmdc:mga09592_17965_c1
634 nmdc:mga09592_295031_c1
635 nmdc:mga09592_3885_c1
636 nmdc:mga09592_43353_c1
637 nmdc:mga09592_711117_c1
638 nmdc:mga09592_794_c1
639 nmdc:mga0qj67_10416_c1
640 nmdc:mga0qj67_1441_c1
641 nmdc:mga0qj67_193_c1
642 nmdc:mga0qj67_234662_c1
643 nmdc:mga0qj67_492436_c1
644 nmdc:mga06r32_14875_c1
645 nmdc:mga06r32_1527037_c1
646 nmdc:mga06r32_275_c1
647 nmdc:mga06r32_51771_c1
648 nmdc:mga06r32_645956_c1
649 nmdc:mga08y16_1159274_c1
650 nmdc:mga08y16_16770_c1
651 Ga0500644_0151046
652 Ga0500651_0421014
653 Ga0500650_0042547
654 Ga0500594_0047614
655 Ga0500559_0020673
656 Ga0500600_0098422
657 Ga0500633_0038695
658 Ga0530510_0538840
659 2501942807
660 2515494896
661 2515718900
662 2515755559
663 2516083112
664 2516090198
665 2623588003
666 2772643635
667 2831936626
668 2832008537
669 2855675194
670 2855681973
671 2855686852
672 2856862032
673 2857289204
674 2858850026
675 2858875871
676 2858883462
677 2858891953
678 2858899358
679 2858907822
680 2866065329
681 2867307799
682 2867320118
683 2867508623
684 2869050843
685 2869067968
686 2869073421
687 2880492055
688 2880500243
689 2887486825
690 2902586672
691 2929222135
692 2929228794
693 2996227960
694 649812631
695 8003832019
696 8003860407
697 8003876242
698 8054706788
699 8054731771
700 8054738917
701 8055416311
702 8056059341

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00885

DMRL_synthase

6,7-dimethyl-8-ribityllumazine synthase

16

137

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j07-assembly1.cif.gz_B crystal structure of a probable riboflavin synthase, beta chain ribh (6,7-dimethyl-8-ribityllumazine synthase, dmrl synthase, lumazine synthase) from mycobacterium leprae 0.9737 12 154
2c9b-assembly2.cif.gz_G lumazine synthase from mycobacterium tuberculosus bound to 3-(1,3,7- trihydro-9-d-ribityl-2,6,8-purinetrione-7-yl) 0.9627 13 156
8f25-assembly1.cif.gz_A cryo-em structure of lumazine synthase nanoparticle linked to vp8* antigen 0.9392 11 154
1hqk-assembly1.cif.gz_A crystal structure analysis of lumazine synthase from aquifex aeolicus 0.9381 11 145
2c9b-assembly2.cif.gz_G lumazine synthase from mycobacterium tuberculosus bound to 3-(1,3,7- trihydro-9-d-ribityl-2,6,8-purinetrione-7-yl) 0.9373 13 156
ID Description Score Start End Superfamily
2vi5I00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Lumazine/riboflavin synthase 0.9595 10 156 3.40.50.960
1nqwC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Lumazine/riboflavin synthase 0.9394 11 154 3.40.50.960
2vi5I00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Lumazine/riboflavin synthase 0.9346 10 156 3.40.50.960
af_B4FBV7_62_217_3.40.50.960 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Lumazine/riboflavin synthase 0.9292 10 145 3.40.50.960
af_Q57751_4_141_3.40.50.960 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Lumazine/riboflavin synthase 0.926 17 156 3.40.50.960
ID Description Score Start End GO Terms
AF-A0A6J4JFP9-F1-model_v4 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (EC 2.5.1.78) 0.9824 10 154 GO:0000906
GO:0005829
GO:0009231
GO:0009349
AF-F4F3M7-F1-model_v4 deleted 0.976 17 155
AF-A0A6A9UXY3-F1-model_v4 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (EC 2.5.1.78) 0.9742 10 155 GO:0000906
GO:0005829
GO:0009231
GO:0009349
AF-A0A7W5T3Z0-F1-model_v4 deleted 0.9731 12 155
AF-A0A6L5FA86-F1-model_v4 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) 0.9688 17 128 GO:0000906
GO:0005829
GO:0009231
GO:0009349

Map