F418083

General Info

Members Datasets Scaffolds Average Seq Length
349 229 336 414

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919704043|2919707261
Length 444
Sequence QQPDAKGHFGIYGGSFVSETLTHAINELKAAYAKYQNDPEFLAEFKSELAHFVGRPSPVYHAARMSREQGGAQIFLKREDLNHTGAHKVNNTIGQAMLAKRMGKPRIIAETGAGQHGVATATICARYGLECVVYMGSEDVKRQSPNVYRMKLLGATVVPVDSGSKTLKDALNEAMRDWVANVDNTFYIIGTVAGPHPYPMMVRDFQSVIGNECLVQMPEMLKTAGCKGEQPDAVVACVGGGSNAMGIFYPYIDHASTRLIGVEAAGEGLDSGKHSASLQKGSPGVLHGNRTYVLQDDNGQVTETHSVSAGLDYPGVGPEHAFLKDIGRAEYVGVTDAEALEAFHYLCRTEGIIPALESSHAVAYAMKLAKTMRPDQSILVNLSGRGDKDIGTVADLSQADFYCRPSCRGQSVKGSMDTASVQIKAKPATVRASRAKTSKVGNAQ

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
3 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
6 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
7 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
8 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
9 2858950400 Achromobacter sp. K91 Isolate Unclassified
10 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
11 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
12 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
13 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
14 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
15 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
16 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
17 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
18 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
19 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
20 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
21 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
22 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
23 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
24 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
25 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
26 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
27 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
28 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
29 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
30 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
31 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
34 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
35 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
36 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
37 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
38 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
39 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
40 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
41 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
42 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
43 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
44 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
45 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
48 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
49 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
54 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
55 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
56 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
57 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
58 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
59 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
60 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
61 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
62 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
63 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
64 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
65 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
66 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
67 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
68 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
69 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
70 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
71 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
72 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
73 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
74 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
78 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
79 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
80 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
83 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
84 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
87 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
88 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
89 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
90 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
91 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
92 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
93 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
94 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
95 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
96 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
97 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
98 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
99 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
110 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
148 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
152 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
153 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
154 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
155 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
156 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
157 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
158 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
159 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
160 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
161 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
162 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
163 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
164 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
165 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
166 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
167 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
168 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
169 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
170 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
171 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
172 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
173 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
174 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
175 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
176 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
177 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
178 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
179 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
180 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
181 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
182 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
183 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
184 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
185 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
186 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
187 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
188 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
189 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
190 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
191 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
192 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
193 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
194 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
195 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
196 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
197 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
198 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
199 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
200 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
201 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
202 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
203 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
204 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
205 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
206 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
207 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
208 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
209 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
210 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
211 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
212 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
213 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
214 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
215 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
216 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
217 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
218 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
219 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
220 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
221 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
222 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
223 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
224 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
225 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
226 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
227 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
228 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
229 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.7
Metatranscriptomes 0.57
Isolates 3.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.63
Nodule 1.15
Rhizoplane 0.29
Rhizosphere 60.74
Stem 0
Stem Tuber 0
Unclassified 17.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000041 3300002704 Bacteria 88843
2 JGI25156J39149_1000031 3300002705 Bacteria 124983
3 JGI25154J39366_1000049 3300002738 Bacteria 124995
4 JGI25157J39369_1000041 3300002741 Bacteria 124982
5 JGI25152J39213_1006184 3300002773 Bacteria 3322
6 JGI25150J39212_1005717 3300002774 Bacteria 2631
7 JGI25159J45721_1007776 3300002987 Bacteria 3028
8 JGI25159J45721_1007901 3300002987 Bacteria 2986
9 Ga0006778J45830_1058353 3300003162 Bacteria 1796
10 JGI25151J46595_10005373 3300003187 Bacteria 6624
11 JGI25153J46596_10005823 3300003215 Bacteria 6405
12 JGI25153J46596_10005931 3300003215 Bacteria 6301
13 JGI25160J50197_1000474 3300003354 Bacteria 24439
14 JGI25161J50226_1000042 3300003374 Bacteria 123841
15 Ga0055526_1018996 3300003771 Bacteria 2528
16 Ga0055537_1006292 3300003773 Bacteria 3037
17 Ga0055524_1000228 3300003775 Bacteria 59742
18 Ga0055536_1002721 3300003781 Bacteria 9803
19 Ga0055530_10000666 3300003791 Bacteria 29345
20 Ga0055540_1000010 3300003792 Bacteria 290865
21 Ga0055531_10001404 3300003794 Bacteria 17808
22 Ga0055543_1001010 3300004625 Bacteria 12544
23 Ga0055543_1006896 3300004625 Bacteria 2687
24 Ga0065165_1000995 3300005262 Bacteria 34985
25 Ga0070676_10003580 3300005328 Bacteria 8119
26 Ga0070676_10055996 3300005328 Bacteria 2329
27 Ga0070670_100005784 3300005331 Bacteria 10450
28 Ga0070670_100047389 3300005331 Bacteria 3698
29 Ga0070677_10000217 3300005333 Bacteria 19892
30 Ga0068869_100007333 3300005334 Bacteria 7036
31 Ga0068868_100035131 3300005338 Bacteria 3873
32 Ga0070687_100054471 3300005343 Bacteria 2084
33 Ga0070668_100006437 3300005347 Bacteria 8708
34 Ga0070669_100008796 3300005353 Bacteria 7203
35 Ga0070669_100026230 3300005353 Bacteria 4191
36 Ga0070675_100003222 3300005354 Bacteria 12362
37 Ga0070675_100084889 3300005354 Bacteria 2644
38 Ga0070671_100002468 3300005355 Bacteria 14300
39 Ga0070663_100163822 3300005455 Bacteria 1713
40 Ga0070662_100016696 3300005457 Bacteria 4933
41 Ga0068867_100000005 3300005459 Bacteria 174097
42 Ga0068867_100002034 3300005459 Bacteria 14144
43 Ga0068867_100009727 3300005459 Bacteria 6780
44 Ga0068867_100055223 3300005459 Bacteria 2936
45 Ga0068867_100101659 3300005459 Bacteria 2196
46 Ga0070706_100001359 3300005467 Bacteria 26010
47 Ga0070698_100101474 3300005471 Bacteria 2849
48 Ga0068853_100117321 3300005539 Bacteria 2370
49 Ga0070672_100000137 3300005543 Bacteria 38969
50 Ga0070672_100008994 3300005543 Bacteria 6865
51 Ga0070665_100213265 3300005548 Bacteria 1931
52 Ga0068855_100018675 3300005563 Bacteria 8338
53 Ga0070664_100109574 3300005564 Bacteria 2409
54 Ga0068852_100079370 3300005616 Bacteria 2907
55 Ga0068852_100149095 3300005616 Bacteria 2173
56 Ga0068859_100057687 3300005617 Bacteria 3911
57 Ga0068864_100006813 3300005618 Bacteria 9361
58 Ga0068866_10016107 3300005718 Bacteria 3335
59 Ga0068851_10026394 3300005834 Bacteria 2854
60 Ga0068863_100038295 3300005841 Bacteria 4562
61 Ga0068858_100051898 3300005842 Bacteria 3794
62 Ga0068860_100000989 3300005843 Bacteria 31420
63 Ga0068860_100005562 3300005843 Bacteria 12742
64 Ga0068860_100139434 3300005843 Bacteria 2330
65 Ga0075365_10015682 3300006038 Bacteria 4589
66 Ga0075364_10021082 3300006051 Bacteria 4105
67 Ga0075432_10028354 3300006058 Bacteria 1931
68 Ga0075362_10010075 3300006177 Bacteria 3678
69 Ga0075362_10022444 3300006177 Bacteria 2659
70 Ga0075367_10006981 3300006178 Bacteria 5750
71 Ga0075367_10051333 3300006178 Bacteria 2437
72 Ga0075366_10001021 3300006195 Bacteria 13727
73 Ga0075366_10009550 3300006195 Bacteria 5418
74 Ga0075366_10033502 3300006195 Bacteria 3026
75 Ga0075366_10042970 3300006195 Bacteria 2676
76 Ga0075366_10047106 3300006195 Bacteria 2555
77 Ga0075366_10136050 3300006195 Bacteria 1484
78 Ga0075370_10011217 3300006353 Bacteria 4703
79 Ga0075370_10060404 3300006353 Bacteria 2159
80 Ga0075370_10063522 3300006353 Bacteria 2105
81 Ga0075370_10063691 3300006353 Bacteria 2102
82 Ga0068865_100013136 3300006881 Bacteria 5225
83 Ga0097620_100057688 3300006931 Bacteria 3911
84 Ga0079104_1000002 3300006946 Bacteria 514469
85 Ga0099826_10000015 3300006948 Bacteria 254837
86 Ga0099826_10081312 3300006948 Bacteria 2017
87 Ga0105250_10003071 3300009092 Bacteria 8051
88 Ga0105240_10010953 3300009093 Bacteria 12704
89 Ga0111539_10249865 3300009094 Bacteria 2065
90 Ga0105245_10118072 3300009098 Bacteria 2475
91 Ga0105245_10133816 3300009098 Bacteria 2328
92 Ga0105243_10010405 3300009148 Bacteria 7065
93 Ga0105242_10001350 3300009176 Bacteria 19375
94 Ga0105242_10035309 3300009176 Bacteria 4009
95 Ga0105248_10164097 3300009177 Bacteria 2505
96 Ga0105249_10059678 3300009553 Bacteria 3499
97 Ga0157374_10017423 3300013296 Bacteria 6324
98 Ga0157374_10132987 3300013296 Bacteria 2409
99 Ga0157378_10158402 3300013297 Bacteria 2115
100 Ga0163162_10001273 3300013306 Bacteria 23577
101 Ga0163162_10038029 3300013306 Bacteria 4803
102 Ga0163162_10107216 3300013306 Bacteria 2889
103 Ga0163162_10263213 3300013306 Bacteria 1856
104 Ga0157375_10003007 3300013308 Bacteria 14639
105 Ga0157375_10003841 3300013308 Bacteria 13033
106 Ga0163163_10067261 3300014325 Bacteria 3562
107 Ga0157377_10000244 3300014745 Bacteria 27334
108 Ga0157379_10007711 3300014968 Bacteria 9320
109 Ga0157379_10046568 3300014968 Bacteria 3868
110 Ga0157376_10033861 3300014969 Bacteria 4118
111 Ga0163161_10010581 3300017792 Bacteria 6387
112 Ga0213872_10000090 3300021361 Bacteria 83813
113 Ga0213872_10000192 3300021361 Bacteria 54234
114 Ga0213875_10006816 3300021388 Bacteria 5962
115 Ga0209435_100014 3300025206 Bacteria 322129
116 Ga0207425_1011309 3300025245 Bacteria 2135
117 Ga0209646_1000001 3300025246 Bacteria 3092932
118 Ga0209026_1000073 3300025250 Bacteria 205399
119 Ga0209759_1000013 3300025256 Bacteria 399300
120 Ga0209129_1000041 3300025258 Bacteria 307590
121 Ga0209565_1000824 3300025263 Bacteria 17629
122 Ga0209673_1000008 3300025273 Bacteria 626013
123 Ga0209673_1003449 3300025273 Bacteria 9317
124 Ga0209130_1000216 3300025284 Bacteria 75536
125 Ga0209130_1000578 3300025284 Bacteria 35635
126 Ga0209675_1000400 3300025291 Bacteria 35775
127 Ga0209675_1010930 3300025291 Bacteria 3054
128 Ga0209676_1000007 3300025292 Bacteria 1029371
129 Ga0209025_1002450 3300025294 Bacteria 19609
130 Ga0209025_1005008 3300025294 Bacteria 11066
131 Ga0209564_1000029 3300025295 Bacteria 505995
132 Ga0209564_1001825 3300025295 Bacteria 19536
133 Ga0209758_1000043 3300025297 Bacteria 402310
134 Ga0209758_1000057 3300025297 Bacteria 333111
135 Ga0209050_1000003 3300025298 Bacteria 1609245
136 Ga0209050_1000529 3300025298 Bacteria 63410
137 Ga0209256_1000001 3300025299 Bacteria 2166974
138 Ga0207426_1000817 3300025302 Bacteria 33418
139 Ga0209051_1000003 3300025303 Bacteria 1609245
140 Ga0209257_1000020 3300025304 Bacteria 773356
141 Ga0207697_10033989 3300025315 Bacteria 2087
142 Ga0207682_10001876 3300025893 Bacteria 9581
143 Ga0207642_10004119 3300025899 Bacteria 4663
144 Ga0207688_10013852 3300025901 Bacteria 4384
145 Ga0207645_10006800 3300025907 Bacteria 8163
146 Ga0207645_10143117 3300025907 Bacteria 1558
147 Ga0207705_10122118 3300025909 Bacteria 1934
148 Ga0207684_10054277 3300025910 Bacteria 3399
149 Ga0207662_10035254 3300025918 Bacteria 2922
150 Ga0207652_10065699 3300025921 Bacteria 3142
151 Ga0207652_10077020 3300025921 Bacteria 2909
152 Ga0207681_10000205 3300025923 Bacteria 47034
153 Ga0207681_10041553 3300025923 Bacteria 3066
154 Ga0207650_10000909 3300025925 Bacteria 22299
155 Ga0207650_10049976 3300025925 Bacteria 3090
156 Ga0207650_10195422 3300025925 Bacteria 1618
157 Ga0207650_10245651 3300025925 Bacteria 1447
158 Ga0207659_10001432 3300025926 Bacteria 14215
159 Ga0207687_10073857 3300025927 Bacteria 2443
160 Ga0207687_10076478 3300025927 Bacteria 2405
161 Ga0207687_10125666 3300025927 Bacteria 1925
162 Ga0207644_10002037 3300025931 Bacteria 13083
163 Ga0207706_10009658 3300025933 Bacteria 8855
164 Ga0207706_10153840 3300025933 Bacteria 2023
165 Ga0207706_10190100 3300025933 Bacteria 1802
166 Ga0207706_10302115 3300025933 Bacteria 1394
167 Ga0207686_10004245 3300025934 Bacteria 7679
168 Ga0207686_10200944 3300025934 Bacteria 1427
169 Ga0207704_10004314 3300025938 Bacteria 6497
170 Ga0207691_10001983 3300025940 Bacteria 20016
171 Ga0207691_10013352 3300025940 Bacteria 7866
172 Ga0207711_10044179 3300025941 Bacteria 3803
173 Ga0207689_10007315 3300025942 Bacteria 9689
174 Ga0207679_10168966 3300025945 Bacteria 1798
175 Ga0207667_10126721 3300025949 Bacteria 2630
176 Ga0207651_10003939 3300025960 Bacteria 7368
177 Ga0207712_10021116 3300025961 Bacteria 4271
178 Ga0207668_10006845 3300025972 Bacteria 6760
179 Ga0207668_10047970 3300025972 Bacteria 2928
180 Ga0207658_10001252 3300025986 Bacteria 20100
181 Ga0207658_10005498 3300025986 Bacteria 8687
182 Ga0207658_10167111 3300025986 Bacteria 1808
183 Ga0207677_10028448 3300026023 Bacteria 3535
184 Ga0207677_10029892 3300026023 Bacteria 3470
185 Ga0207677_10066047 3300026023 Bacteria 2527
186 Ga0207703_10011157 3300026035 Bacteria 6992
187 Ga0207678_10246334 3300026067 Bacteria 1531
188 Ga0207708_10021642 3300026075 Bacteria 4850
189 Ga0207708_10065658 3300026075 Bacteria 2774
190 Ga0207641_10004081 3300026088 Bacteria 12733
191 Ga0207648_10000310 3300026089 Bacteria 53471
192 Ga0207648_10000541 3300026089 Bacteria 42157
193 Ga0207648_10017210 3300026089 Bacteria 6588
194 Ga0207648_10040304 3300026089 Bacteria 4105
195 Ga0207648_10085356 3300026089 Bacteria 2754
196 Ga0207676_10018266 3300026095 Bacteria 5096
197 Ga0207676_10073002 3300026095 Bacteria 2760
198 Ga0207683_10031603 3300026121 Bacteria 4594
199 Ga0207683_10037011 3300026121 Bacteria 4250
200 Ga0207683_10040811 3300026121 Bacteria 4052
201 Ga0207683_10083050 3300026121 Bacteria 2847
202 Ga0207698_10121334 3300026142 Bacteria 2213
203 Ga0209282_1000033 3300027666 Bacteria 141940
204 Ga0209998_10017558 3300027717 Bacteria 1513
205 Ga0268265_10095674 3300028380 Bacteria 2385
206 Ga0268264_10001585 3300028381 Bacteria 21062
207 Ga0268264_10013175 3300028381 Bacteria 6803
208 Ga0268264_10187618 3300028381 Bacteria 1882
209 Ga0307517_10001635 3300028786 Bacteria 37076
210 Ga0307515_10000084 3300028794 Bacteria 221434
211 Ga0307515_10002409 3300028794 Bacteria 40792
212 Ga0307515_10020164 3300028794 Bacteria 11918
213 Ga0307512_10050038 3300030522 Bacteria 3361
214 Ga0265332_10000009 3300031238 Bacteria 295760
215 Ga0265332_10072051 3300031238 Bacteria 1471
216 Ga0265316_10000168 3300031344 Bacteria 73962
217 Ga0307513_10000011 3300031456 Bacteria 354929
218 Ga0307513_10000557 3300031456 Bacteria 53384
219 Ga0307513_10012208 3300031456 Bacteria 10620
220 Ga0307513_10023451 3300031456 Bacteria 7208
221 Ga0307513_10036776 3300031456 Bacteria 5456
222 Ga0307513_10076288 3300031456 Bacteria 3477
223 Ga0307513_10103251 3300031456 Bacteria 2868
224 Ga0307509_10004656 3300031507 Bacteria 19591
225 Ga0307509_10004944 3300031507 Bacteria 18868
226 Ga0307509_10016899 3300031507 Bacteria 8418
227 Ga0307408_100000874 3300031548 Bacteria 23686
228 Ga0307408_100008340 3300031548 Bacteria 6843
229 Ga0307408_100048344 3300031548 Bacteria 3051
230 Ga0307508_10000140 3300031616 Bacteria 85941
231 Ga0307508_10002494 3300031616 Bacteria 19401
232 Ga0307508_10002594 3300031616 Bacteria 19009
233 Ga0307508_10126484 3300031616 Bacteria 2158
234 Ga0307514_10000319 3300031649 Bacteria 115327
235 Ga0307514_10000906 3300031649 Bacteria 45659
236 Ga0307514_10003920 3300031649 Bacteria 13920
237 Ga0307514_10035292 3300031649 Bacteria 3980
238 Ga0316575_10005367 3300031665 Bacteria 4567
239 Ga0316575_10023860 3300031665 Bacteria 2366
240 Ga0265314_10001674 3300031711 Bacteria 24148
241 Ga0265342_10093128 3300031712 Bacteria 1725
242 Ga0316578_10053406 3300031728 Bacteria 2367
243 Ga0307516_10071338 3300031730 Bacteria 3335
244 Ga0307405_10010625 3300031731 Bacteria 4783
245 Ga0307518_10141342 3300031838 Bacteria 1679
246 Ga0307406_10035363 3300031901 Bacteria 3071
247 Ga0307406_10075377 3300031901 Bacteria 2225
248 Ga0316583_10012268 3300032133 Bacteria 3092
249 Ga0307507_10099452 3300033179 Bacteria 2443
250 Ga0307510_10005535 3300033180 Bacteria 15059
251 Ga0307510_10060400 3300033180 Bacteria 3901
252 Ga0307510_10127239 3300033180 Bacteria 2233
253 Ga0307510_10139288 3300033180 Bacteria 2074
254 Ga0307510_10152263 3300033180 Bacteria 1928
255 Ga0316588_1001805 3300033528 Bacteria 3618
256 Ga0373926_0048985 3300035083 Bacteria 1521
257 Ga0316574_0005091 3300035398 Bacteria 6983
258 Ga0316574_0028810 3300035398 Bacteria 3351
259 Ga0373937_0068025 3300036401 Bacteria 3283
260 Ga0373937_0171990 3300036401 Bacteria 2033
261 Ga0316582_0004765 3300036647 Bacteria 6911
262 Ga0316582_0036701 3300036647 Bacteria 3034
263 Ga0316584_0032252 3300036712 Bacteria 3877
264 Ga0316584_0042025 3300036712 Bacteria 3408
265 Ga0373925_0002050 3300037068 Bacteria 16608
266 Ga0395899_0003039 3300037312 Bacteria 13398
267 Ga0395900_0000054 3300037418 Bacteria 220487
268 Ga0395898_0004344 3300037466 Bacteria 15524
269 Ga0395898_0141723 3300037466 Bacteria 2301
270 Ga0395905_0044723 3300037471 Bacteria 4154
271 Ga0395905_0048444 3300037471 Bacteria 3982
272 Ga0395905_0112226 3300037471 Bacteria 2560
273 Ga0395905_0241553 3300037471 Bacteria 1688
274 Ga0436364_1186915 3300037853 Bacteria 7469
275 Ga0395901_0000034 3300038443 Bacteria 230365
276 Ga0395901_0054049 3300038443 Bacteria 4174
277 Ga0395901_0082880 3300038443 Bacteria 3351
278 Ga0395901_0185748 3300038443 Bacteria 2180
279 Ga0395901_0406518 3300038443 Bacteria 1398
280 Ga0400484_39316 3300038725 Bacteria 39081
281 Ga0400488_23163 3300038741 Bacteria 2048
282 Ga0400488_25304 3300038741 Bacteria 5252
283 Ga0400486_04254 3300038742 Bacteria 2818
284 Ga0400483_072400 3300039062 Bacteria 15624
285 Ga0400483_077594 3300039062 Bacteria 2062
286 Ga0400483_289224 3300039062 Bacteria 44357
287 Ga0400487_10510 3300039110 Bacteria 18428
288 Ga0400487_44661 3300039110 Bacteria 2014
289 Ga0436361_0350386 3300039447 Bacteria 47576
290 Ga0451577_0005521 3300042876 Bacteria 12911
291 Ga0466969_0012632 3300044656 Bacteria 4450
292 Ga0466972_0039721 3300044658 Bacteria 2295
293 Ga0453683_0004136 3300044673 Bacteria 10417
294 Ga0466961_0017615 3300044693 Bacteria 4589
295 Ga0453684_0000069 3300044712 Bacteria 456439
296 Ga0453684_0001796 3300044712 Bacteria 56954
297 Ga0451576_0017096 3300045051 Bacteria 7981
298 Ga0451576_0040382 3300045051 Bacteria 4939
299 Ga0451576_0046653 3300045051 Bacteria 4562
300 Ga0451576_0084550 3300045051 Bacteria 3301
301 Ga0466967_0096488 3300045976 Bacteria 2697
302 Ga0495592_0000021 3300046454 Bacteria 140462
303 Ga0495585_0000175 3300046492 Bacteria 69100
304 Ga0495616_0006070 3300046513 Bacteria 7361
305 Ga0495633_0005080 3300046558 Bacteria 8184
306 Ga0495649_0002061 3300046694 Bacteria 14469
307 Ga0496114_0125884 3300048917 Bacteria 2209
308 Ga0496116_0010268 3300048919 Bacteria 7869
309 Ga0496122_0012928 3300048925 Bacteria 8239
310 Ga0496123_0001951 3300048926 Bacteria 26821
311 Ga0496125_0008691 3300048928 Bacteria 10576
312 Ga0501043_0000108 3300049579 Bacteria 77329
313 Ga0501046_0000050 3300049580 Bacteria 134922
314 Ga0501047_0000012 3300049581 Bacteria 368824
315 Ga0501048_0001920 3300049582 Bacteria 15783
316 Ga0501070_0007212 3300049586 Bacteria 9435
317 Ga0501077_0020855 3300049593 Bacteria 4149
318 Ga0501198_000004 3300049649 Bacteria 175146
319 Ga0501222_000038 3300049662 Bacteria 51424
320 Ga0501045_0005119 3300049824 Bacteria 9072
321 nmdc:mga0yw44_14099_c1 3300050492 Bacteria 4232
322 nmdc:mga0k408_11324_c1 3300050493 Bacteria 4854
323 nmdc:mga0k408_44081_c1 3300050493 Bacteria 2572
324 nmdc:mga0k408_63826_c1 3300050493 Bacteria 2143
325 nmdc:mga06z11_32509_c1 3300050494 Bacteria 2545
326 nmdc:mga06z11_71129_c1 3300050494 Bacteria 1841
327 nmdc:mga07m45_17067_c1 3300050496 Bacteria 3893
328 nmdc:mga07m45_67540_c1 3300050496 Bacteria 2032
329 Ga0500578_0001187 3300053086 Bacteria 27526
330 Ga0500644_0009464 3300053088 Bacteria 2607
331 Ga0500651_0012618 3300053093 Bacteria 5124
332 Ga0500559_0000135 3300053136 Bacteria 56960
333 Ga0500568_0001605 3300053139 Bacteria 14305
334 Ga0500622_0005574 3300053156 Bacteria 7513
335 Ga0500645_001437 3300053730 Bacteria 12084
336 Ga0590071_000225 3300059421 Bacteria 16513

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0406518 Ga0395901_0406518_300_1334 344
2 3300038741 Ga0400488_23163 Ga0400488_23163_33_1115 360
3 3300035398 Ga0316574_0005091 Ga0316574_0005091_938_2062 374
4 3300036647 Ga0316582_0004765 Ga0316582_0004765_1823_2947 374
5 3300036712 Ga0316584_0042025 Ga0316584_0042025_103_1227 374
6 3300039062 Ga0400483_077594 Ga0400483_077594_413_1537 374
7 iso_pu_bacteria 2928503688 2928506990 393
8 3300049586 Ga0501070_0007212 Ga0501070_0007212_5124_6308 394
9 iso_pu_bacteria 2858950400 2858955294 396
10 3300004625 Ga0055543_1006896 Ga0055543_10068962 397
11 3300006948 Ga0099826_10000015 Ga0099826_10000015171 397
12 3300009094 Ga0111539_10249865 Ga0111539_102498652 397
13 3300027666 Ga0209282_1000033 Ga0209282_100003372 397
14 3300031665 Ga0316575_10023860 Ga0316575_100238603 397
15 3300032133 Ga0316583_10012268 Ga0316583_100122683 397
16 3300036647 Ga0316582_0036701 Ga0316582_0036701_993_2219 397
17 3300036712 Ga0316584_0032252 Ga0316584_0032252_1644_2870 397
18 3300038725 Ga0400484_39316 Ga0400484_39316_13827_15044 397
19 3300038741 Ga0400488_25304 Ga0400488_25304_1013_2245 397
20 3300038742 Ga0400486_04254 Ga0400486_04254_192_1406 397
21 3300039062 Ga0400483_072400 Ga0400483_072400_9226_10458 397
22 3300039062 Ga0400483_289224 Ga0400483_289224_35733_36974 397
23 3300039110 Ga0400487_10510 Ga0400487_10510_1631_2848 397
24 3300039110 Ga0400487_44661 Ga0400487_44661_95_1309 397
25 3300046513 Ga0495616_0006070 Ga0495616_0006070_2124_3317 397
26 3300046694 Ga0495649_0002061 Ga0495649_0002061_2173_3366 397
27 3300048917 Ga0496114_0125884 Ga0496114_0125884_762_1955 397
28 3300048919 Ga0496116_0010268 Ga0496116_0010268_1549_2742 397
29 3300048925 Ga0496122_0012928 Ga0496122_0012928_231_1424 397
30 3300048926 Ga0496123_0001951 Ga0496123_0001951_20183_21376 397
31 3300021388 Ga0213875_10006816 Ga0213875_100068163 398
32 3300025921 Ga0207652_10077020 Ga0207652_100770203 398
33 3300037853 Ga0436364_1186915 Ga0436364_1186915_1984_3195 398
34 3300045051 Ga0451576_0017096 Ga0451576_0017096_1668_2864 398
35 3300005328 Ga0070676_10003580 Ga0070676_100035803 399
36 3300005331 Ga0070670_100047389 Ga0070670_1000473892 399
37 3300005334 Ga0068869_100007333 Ga0068869_1000073335 399
38 3300005338 Ga0068868_100035131 Ga0068868_1000351312 399
39 3300005343 Ga0070687_100054471 Ga0070687_1000544712 399
40 3300005347 Ga0070668_100006437 Ga0070668_1000064377 399
41 3300005353 Ga0070669_100008796 Ga0070669_1000087963 399
42 3300005354 Ga0070675_100084889 Ga0070675_1000848893 399
43 3300005455 Ga0070663_100163822 Ga0070663_1001638222 399
44 3300005457 Ga0070662_100016696 Ga0070662_1000166965 399
45 3300005459 Ga0068867_100055223 Ga0068867_1000552233 399
46 3300005459 Ga0068867_100101659 Ga0068867_1001016592 399
47 3300005543 Ga0070672_100008994 Ga0070672_1000089944 399
48 3300005616 Ga0068852_100079370 Ga0068852_1000793703 399
49 3300005616 Ga0068852_100149095 Ga0068852_1001490952 399
50 3300005617 Ga0068859_100057687 Ga0068859_1000576872 399
51 3300005718 Ga0068866_10016107 Ga0068866_100161074 399
52 3300005841 Ga0068863_100038295 Ga0068863_1000382953 399
53 3300005842 Ga0068858_100051898 Ga0068858_1000518984 399
54 3300005843 Ga0068860_100005562 Ga0068860_10000556210 399
55 3300006881 Ga0068865_100013136 Ga0068865_1000131363 399
56 3300006931 Ga0097620_100057688 Ga0097620_1000576882 399
57 3300009098 Ga0105245_10133816 Ga0105245_101338162 399
58 3300009148 Ga0105243_10010405 Ga0105243_100104051 399
59 3300009176 Ga0105242_10035309 Ga0105242_100353094 399
60 3300009177 Ga0105248_10164097 Ga0105248_101640973 399
61 3300009553 Ga0105249_10059678 Ga0105249_100596783 399
62 3300013306 Ga0163162_10038029 Ga0163162_100380294 399
63 3300013308 Ga0157375_10003007 Ga0157375_100030074 399
64 3300013308 Ga0157375_10003841 Ga0157375_100038415 399
65 3300014325 Ga0163163_10067261 Ga0163163_100672612 399
66 3300014968 Ga0157379_10046568 Ga0157379_100465683 399
67 3300017792 Ga0163161_10010581 Ga0163161_100105811 399
68 3300021361 Ga0213872_10000192 Ga0213872_1000019248 399
69 3300025315 Ga0207697_10033989 Ga0207697_100339892 399
70 3300025899 Ga0207642_10004119 Ga0207642_100041193 399
71 3300025907 Ga0207645_10006800 Ga0207645_100068005 399
72 3300025918 Ga0207662_10035254 Ga0207662_100352542 399
73 3300025923 Ga0207681_10000205 Ga0207681_100002057 399
74 3300025925 Ga0207650_10049976 Ga0207650_100499763 399
75 3300025925 Ga0207650_10245651 Ga0207650_102456512 399
76 3300025927 Ga0207687_10076478 Ga0207687_100764782 399
77 3300025933 Ga0207706_10153840 Ga0207706_101538402 399
78 3300025933 Ga0207706_10190100 Ga0207706_101901002 399
79 3300025933 Ga0207706_10302115 Ga0207706_103021152 399
80 3300025934 Ga0207686_10200944 Ga0207686_102009441 399
81 3300025938 Ga0207704_10004314 Ga0207704_100043142 399
82 3300025940 Ga0207691_10013352 Ga0207691_100133524 399
83 3300025941 Ga0207711_10044179 Ga0207711_100441794 399
84 3300025942 Ga0207689_10007315 Ga0207689_100073156 399
85 3300025961 Ga0207712_10021116 Ga0207712_100211163 399
86 3300025972 Ga0207668_10006845 Ga0207668_100068455 399
87 3300025986 Ga0207658_10001252 Ga0207658_100012529 399
88 3300026023 Ga0207677_10029892 Ga0207677_100298924 399
89 3300026035 Ga0207703_10011157 Ga0207703_100111571 399
90 3300026067 Ga0207678_10246334 Ga0207678_102463341 399
91 3300026075 Ga0207708_10021642 Ga0207708_100216423 399
92 3300026075 Ga0207708_10065658 Ga0207708_100656583 399
93 3300026088 Ga0207641_10004081 Ga0207641_100040819 399
94 3300026089 Ga0207648_10017210 Ga0207648_100172105 399
95 3300026089 Ga0207648_10085356 Ga0207648_100853563 399
96 3300026121 Ga0207683_10083050 Ga0207683_100830503 399
97 3300026142 Ga0207698_10121334 Ga0207698_101213342 399
98 3300027717 Ga0209998_10017558 Ga0209998_100175581 399
99 3300028380 Ga0268265_10095674 Ga0268265_100956742 399
100 3300028381 Ga0268264_10001585 Ga0268264_1000158511 399
101 3300031665 Ga0316575_10005367 Ga0316575_100053674 399
102 3300031728 Ga0316578_10053406 Ga0316578_100534062 399
103 3300033528 Ga0316588_1001805 Ga0316588_10018053 399
104 3300035083 Ga0373926_0048985 Ga0373926_0048985_111_1334 399
105 3300035398 Ga0316574_0028810 Ga0316574_0028810_2122_3321 399
106 3300036401 Ga0373937_0068025 Ga0373937_0068025_1253_2452 399
107 3300036401 Ga0373937_0171990 Ga0373937_0171990_543_1742 399
108 3300037312 Ga0395899_0003039 Ga0395899_0003039_5644_6918 399
109 3300038443 Ga0395901_0000034 Ga0395901_0000034_156399_157667 399
110 3300039447 Ga0436361_0350386 Ga0436361_0350386_42459_43658 399
111 3300044712 Ga0453684_0000069 Ga0453684_0000069_332829_334034 399
112 3300044712 Ga0453684_0001796 Ga0453684_0001796_21397_22617 399
113 3300045051 Ga0451576_0046653 Ga0451576_0046653_1706_2911 399
114 3300049593 Ga0501077_0020855 Ga0501077_0020855_2792_3991 399
115 3300005539 Ga0068853_100117321 Ga0068853_1001173212 400
116 3300046492 Ga0495585_0000175 Ga0495585_0000175_5414_6658 400
117 3300005548 Ga0070665_100213265 Ga0070665_1002132652 401
118 3300005618 Ga0068864_100006813 Ga0068864_1000068134 401
119 3300005843 Ga0068860_100139434 Ga0068860_1001394342 401
120 3300009098 Ga0105245_10118072 Ga0105245_101180722 401
121 3300013296 Ga0157374_10132987 Ga0157374_101329873 401
122 3300013306 Ga0163162_10107216 Ga0163162_101072163 401
123 3300025925 Ga0207650_10195422 Ga0207650_101954221 401
124 3300026095 Ga0207676_10018266 Ga0207676_100182665 401
125 3300026121 Ga0207683_10040811 Ga0207683_100408113 401
126 3300028381 Ga0268264_10187618 Ga0268264_101876182 401
127 3300031649 Ga0307514_10000906 Ga0307514_1000090620 401
128 3300033180 Ga0307510_10127239 Ga0307510_101272392 401
129 3300037418 Ga0395900_0000054 Ga0395900_0000054_108443_109648 401
130 3300037466 Ga0395898_0004344 Ga0395898_0004344_3608_4813 401
131 3300031456 Ga0307513_10103251 Ga0307513_101032513 402
132 3300006195 Ga0075366_10033502 Ga0075366_100335023 406
133 3300050493 nmdc:mga0k408_11324_c1 nmdc:mga0k408_11324_c1_1178_2407 407
134 3300053139 Ga0500568_0001605 Ga0500568_0001605_4909_6162 410
135 iso_pu_bacteria 2585428057 2587726334 410
136 iso_pu_bacteria 2585428058 2587731764 410
137 iso_pu_bacteria 2588253510 2588292270 410
138 iso_pu_bacteria 2643221592 2643970877 410
139 iso_pu_bacteria 2643221625 2644138873 410
140 iso_pu_bacteria 2643221648 2644273896 410
141 3300009176 Ga0105242_10001350 Ga0105242_1000135015 411
142 3300025934 Ga0207686_10004245 Ga0207686_100042455 411
143 3300042876 Ga0451577_0005521 Ga0451577_0005521_6160_7428 411
144 3300045976 Ga0466967_0096488 Ga0466967_0096488_1356_2606 412
145 iso_pu_bacteria 2932422444 2932424772 413
146 3300003215 JGI25153J46596_10005823 JGI25153J46596_100058233 414
147 3300006051 Ga0075364_10021082 Ga0075364_100210824 414
148 3300006353 Ga0075370_10011217 Ga0075370_100112174 414
149 3300025273 Ga0209673_1003449 Ga0209673_10034498 414
150 3300025297 Ga0209758_1000057 Ga0209758_10000574 414
151 3300025298 Ga0209050_1000529 Ga0209050_100052922 414
152 3300025933 Ga0207706_10009658 Ga0207706_100096583 414
153 3300028794 Ga0307515_10002409 Ga0307515_100024099 414
154 3300031344 Ga0265316_10000168 Ga0265316_1000016859 414
155 3300031616 Ga0307508_10000140 Ga0307508_1000014035 414
156 3300031649 Ga0307514_10003920 Ga0307514_100039204 414
157 3300045051 Ga0451576_0084550 Ga0451576_0084550_953_2197 414
158 3300050496 nmdc:mga07m45_17067_c1 nmdc:mga07m45_17067_c1_1198_2442 414
159 3300053086 Ga0500578_0001187 Ga0500578_0001187_21179_22435 414
160 3300053093 Ga0500651_0012618 Ga0500651_0012618_2129_3373 414
161 3300053156 Ga0500622_0005574 Ga0500622_0005574_2785_4029 414
162 3300002773 JGI25152J39213_1006184 JGI25152J39213_10061843 415
163 3300003215 JGI25153J46596_10005931 JGI25153J46596_100059314 415
164 3300003771 Ga0055526_1018996 Ga0055526_10189963 415
165 3300005459 Ga0068867_100002034 Ga0068867_10000203413 415
166 3300005563 Ga0068855_100018675 Ga0068855_1000186756 415
167 3300005843 Ga0068860_100000989 Ga0068860_1000009899 415
168 3300006038 Ga0075365_10015682 Ga0075365_100156823 415
169 3300006177 Ga0075362_10010075 Ga0075362_100100753 415
170 3300006178 Ga0075367_10006981 Ga0075367_100069812 415
171 3300006195 Ga0075366_10042970 Ga0075366_100429702 415
172 3300006195 Ga0075366_10047106 Ga0075366_100471061 415
173 3300006353 Ga0075370_10063691 Ga0075370_100636912 415
174 3300009093 Ga0105240_10010953 Ga0105240_100109538 415
175 3300013297 Ga0157378_10158402 Ga0157378_101584021 415
176 3300013306 Ga0163162_10001273 Ga0163162_100012732 415
177 3300014968 Ga0157379_10007711 Ga0157379_100077116 415
178 3300014969 Ga0157376_10033861 Ga0157376_100338612 415
179 3300025258 Ga0209129_1000041 Ga0209129_100004124 415
180 3300025295 Ga0209564_1000029 Ga0209564_1000029170 415
181 3300025297 Ga0209758_1000043 Ga0209758_1000043270 415
182 3300025921 Ga0207652_10065699 Ga0207652_100656992 415
183 3300025927 Ga0207687_10073857 Ga0207687_100738573 415
184 3300025949 Ga0207667_10126721 Ga0207667_101267212 415
185 3300026023 Ga0207677_10066047 Ga0207677_100660472 415
186 3300026089 Ga0207648_10000310 Ga0207648_1000031030 415
187 3300026121 Ga0207683_10037011 Ga0207683_100370112 415
188 3300028381 Ga0268264_10013175 Ga0268264_100131755 415
189 3300028786 Ga0307517_10001635 Ga0307517_100016352 415
190 3300028794 Ga0307515_10020164 Ga0307515_100201646 415
191 3300030522 Ga0307512_10050038 Ga0307512_100500384 415
192 3300031456 Ga0307513_10012208 Ga0307513_100122085 415
193 3300031456 Ga0307513_10036776 Ga0307513_100367764 415
194 3300031507 Ga0307509_10004656 Ga0307509_100046566 415
195 3300031507 Ga0307509_10004944 Ga0307509_1000494415 415
196 3300031507 Ga0307509_10016899 Ga0307509_100168994 415
197 3300031548 Ga0307408_100048344 Ga0307408_1000483442 415
198 3300031616 Ga0307508_10002494 Ga0307508_100024945 415
199 3300031616 Ga0307508_10002594 Ga0307508_1000259410 415
200 3300031616 Ga0307508_10126484 Ga0307508_101264842 415
201 3300031649 Ga0307514_10035292 Ga0307514_100352924 415
202 3300031838 Ga0307518_10141342 Ga0307518_101413422 415
203 3300033179 Ga0307507_10099452 Ga0307507_100994521 415
204 3300033180 Ga0307510_10005535 Ga0307510_1000553512 415
205 3300033180 Ga0307510_10060400 Ga0307510_100604004 415
206 3300033180 Ga0307510_10139288 Ga0307510_101392882 415
207 3300033180 Ga0307510_10152263 Ga0307510_101522632 415
208 3300038443 Ga0395901_0054049 Ga0395901_0054049_2316_3563 415
209 3300044656 Ga0466969_0012632 Ga0466969_0012632_2773_4020 415
210 3300044693 Ga0466961_0017615 Ga0466961_0017615_2747_3994 415
211 3300046454 Ga0495592_0000021 Ga0495592_0000021_12974_14221 415
212 3300048928 Ga0496125_0008691 Ga0496125_0008691_4635_5882 415
213 3300050492 nmdc:mga0yw44_14099_c1 nmdc:mga0yw44_14099_c1_2083_3330 415
214 3300053088 Ga0500644_0009464 Ga0500644_0009464_700_1959 415
215 3300053136 Ga0500559_0000135 Ga0500559_0000135_13906_15165 415
216 3300059421 Ga0590071_000225 Ga0590071_000225_3675_4970 415
217 3300006195 Ga0075366_10136050 Ga0075366_101360502 416
218 3300025927 Ga0207687_10125666 Ga0207687_101256662 416
219 3300025986 Ga0207658_10005498 Ga0207658_100054985 416
220 3300031456 Ga0307513_10076288 Ga0307513_100762882 416
221 3300037466 Ga0395898_0141723 Ga0395898_0141723_891_2141 416
222 3300037471 Ga0395905_0241553 Ga0395905_0241553_136_1395 416
223 3300038443 Ga0395901_0082880 Ga0395901_0082880_1918_3168 416
224 3300038443 Ga0395901_0185748 Ga0395901_0185748_49_1299 416
225 3300044658 Ga0466972_0039721 Ga0466972_0039721_920_2170 416
226 3300050494 nmdc:mga06z11_32509_c1 nmdc:mga06z11_32509_c1_1252_2502 416
227 3300006946 Ga0079104_1000002 Ga0079104_1000002306 417
228 3300009092 Ga0105250_10003071 Ga0105250_100030714 417
229 3300037068 Ga0373925_0002050 Ga0373925_0002050_3860_5122 417
230 3300037471 Ga0395905_0048444 Ga0395905_0048444_1094_2347 417
231 3300037471 Ga0395905_0112226 Ga0395905_0112226_877_2130 417
232 3300046558 Ga0495633_0005080 Ga0495633_0005080_5414_6682 417
233 iso_pu_bacteria 2643221654 2644302080 417
234 iso_pu_bacteria 2939631187 2939631930 418
235 3300002774 JGI25150J39212_1005717 JGI25150J39212_10057173 419
236 3300002987 JGI25159J45721_1007901 JGI25159J45721_10079013 419
237 3300003354 JGI25160J50197_1000474 JGI25160J50197_100047414 419
238 3300003374 JGI25161J50226_1000042 JGI25161J50226_100004253 419
239 3300004625 Ga0055543_1001010 Ga0055543_100101011 419
240 3300006058 Ga0075432_10028354 Ga0075432_100283542 419
241 3300025245 Ga0207425_1011309 Ga0207425_10113091 419
242 3300025284 Ga0209130_1000216 Ga0209130_100021623 419
243 3300025302 Ga0207426_1000817 Ga0207426_100081722 419
244 3300028794 Ga0307515_10000084 Ga0307515_1000008489 419
245 3300031456 Ga0307513_10000557 Ga0307513_1000055716 419
246 3300031456 Ga0307513_10023451 Ga0307513_100234516 419
247 3300031649 Ga0307514_10000319 Ga0307514_1000031975 419
248 3300053730 Ga0500645_001437 Ga0500645_001437_7027_8286 419
249 3300013296 Ga0157374_10017423 Ga0157374_100174234 420
250 3300031548 Ga0307408_100000874 Ga0307408_10000087410 420
251 3300031901 Ga0307406_10035363 Ga0307406_100353633 420
252 3300049579 Ga0501043_0000108 Ga0501043_0000108_12367_13629 420
253 3300049580 Ga0501046_0000050 Ga0501046_0000050_63739_65001 420
254 3300049581 Ga0501047_0000012 Ga0501047_0000012_303831_305093 420
255 3300049582 Ga0501048_0001920 Ga0501048_0001920_8005_9267 420
256 3300049824 Ga0501045_0005119 Ga0501045_0005119_7439_8701 420
257 3300003162 Ga0006778J45830_1058353 Ga0006778J45830_10583532 421
258 3300005459 Ga0068867_100000005 Ga0068867_10000000521 421
259 3300005467 Ga0070706_100001359 Ga0070706_10000135915 421
260 3300005471 Ga0070698_100101474 Ga0070698_1001014743 421
261 3300006178 Ga0075367_10051333 Ga0075367_100513332 421
262 3300006195 Ga0075366_10001021 Ga0075366_100010218 421
263 3300006195 Ga0075366_10009550 Ga0075366_100095503 421
264 3300006353 Ga0075370_10060404 Ga0075370_100604042 421
265 3300014745 Ga0157377_10000244 Ga0157377_1000024422 421
266 3300025910 Ga0207684_10054277 Ga0207684_100542773 421
267 3300026089 Ga0207648_10000541 Ga0207648_1000054117 421
268 3300031238 Ga0265332_10072051 Ga0265332_100720511 421
269 3300031711 Ga0265314_10001674 Ga0265314_1000167422 421
270 3300031712 Ga0265342_10093128 Ga0265342_100931282 421
271 3300037471 Ga0395905_0044723 Ga0395905_0044723_779_2044 421
272 3300049649 Ga0501198_000004 Ga0501198_000004_61741_63006 421
273 3300049662 Ga0501222_000038 Ga0501222_000038_11992_13257 421
274 3300050493 nmdc:mga0k408_44081_c1 nmdc:mga0k408_44081_c1_125_1408 421
275 3300050493 nmdc:mga0k408_63826_c1 nmdc:mga0k408_63826_c1_299_1564 421
276 3300050494 nmdc:mga06z11_71129_c1 nmdc:mga06z11_71129_c1_50_1333 421
277 3300050496 nmdc:mga07m45_67540_c1 nmdc:mga07m45_67540_c1_334_1617 421
278 3300005328 Ga0070676_10055996 Ga0070676_100559963 422
279 3300005331 Ga0070670_100005784 Ga0070670_1000057842 422
280 3300005333 Ga0070677_10000217 Ga0070677_100002176 422
281 3300005353 Ga0070669_100026230 Ga0070669_1000262303 422
282 3300005354 Ga0070675_100003222 Ga0070675_10000322212 422
283 3300005355 Ga0070671_100002468 Ga0070671_1000024683 422
284 3300005459 Ga0068867_100009727 Ga0068867_1000097275 422
285 3300005543 Ga0070672_100000137 Ga0070672_10000013718 422
286 3300005564 Ga0070664_100109574 Ga0070664_1001095742 422
287 3300005834 Ga0068851_10026394 Ga0068851_100263943 422
288 3300006177 Ga0075362_10022444 Ga0075362_100224443 422
289 3300013306 Ga0163162_10263213 Ga0163162_102632132 422
290 3300025291 Ga0209675_1010930 Ga0209675_10109301 422
291 3300025893 Ga0207682_10001876 Ga0207682_100018764 422
292 3300025901 Ga0207688_10013852 Ga0207688_100138524 422
293 3300025907 Ga0207645_10143117 Ga0207645_101431172 422
294 3300025923 Ga0207681_10041553 Ga0207681_100415534 422
295 3300025925 Ga0207650_10000909 Ga0207650_1000090912 422
296 3300025926 Ga0207659_10001432 Ga0207659_1000143214 422
297 3300025931 Ga0207644_10002037 Ga0207644_1000203711 422
298 3300025940 Ga0207691_10001983 Ga0207691_100019839 422
299 3300025945 Ga0207679_10168966 Ga0207679_101689662 422
300 3300025960 Ga0207651_10003939 Ga0207651_100039391 422
301 3300025972 Ga0207668_10047970 Ga0207668_100479703 422
302 3300025986 Ga0207658_10167111 Ga0207658_101671112 422
303 3300026023 Ga0207677_10028448 Ga0207677_100284483 422
304 3300026089 Ga0207648_10040304 Ga0207648_100403043 422
305 3300026095 Ga0207676_10073002 Ga0207676_100730023 422
306 3300026121 Ga0207683_10031603 Ga0207683_100316032 422
307 3300025909 Ga0207705_10122118 Ga0207705_101221181 423
308 3300031731 Ga0307405_10010625 Ga0307405_100106252 423
309 3300005262 Ga0065165_1000995 Ga0065165_100099529 426
310 3300021361 Ga0213872_10000090 Ga0213872_1000009063 426
311 iso_pu_bacteria 2511231002 2511244151 426
312 3300031238 Ga0265332_10000009 Ga0265332_1000000969 427
313 iso_pu_bacteria 2919704043 2919707261 429
314 3300031730 Ga0307516_10071338 Ga0307516_100713383 432
315 3300002704 JGI25155J39150_1000041 JGI25155J39150_100004156 433
316 3300002705 JGI25156J39149_1000031 JGI25156J39149_100003126 433
317 3300002738 JGI25154J39366_1000049 JGI25154J39366_100004987 433
318 3300002741 JGI25157J39369_1000041 JGI25157J39369_100004187 433
319 3300002987 JGI25159J45721_1007776 JGI25159J45721_10077761 433
320 3300003187 JGI25151J46595_10005373 JGI25151J46595_100053731 433
321 3300003773 Ga0055537_1006292 Ga0055537_10062921 433
322 3300003775 Ga0055524_1000228 Ga0055524_100022815 433
323 3300003781 Ga0055536_1002721 Ga0055536_10027214 433
324 3300003791 Ga0055530_10000666 Ga0055530_1000066615 433
325 3300003792 Ga0055540_1000010 Ga0055540_100001061 433
326 3300003794 Ga0055531_10001404 Ga0055531_1000140411 433
327 3300006353 Ga0075370_10063522 Ga0075370_100635221 433
328 3300006948 Ga0099826_10081312 Ga0099826_100813122 433
329 3300025206 Ga0209435_100014 Ga0209435_10001487 433
330 3300025246 Ga0209646_1000001 Ga0209646_100000188 433
331 3300025250 Ga0209026_1000073 Ga0209026_100007387 433
332 3300025256 Ga0209759_1000013 Ga0209759_100001388 433
333 3300025263 Ga0209565_1000824 Ga0209565_10008244 433
334 3300025273 Ga0209673_1000008 Ga0209673_1000008478 433
335 3300025284 Ga0209130_1000578 Ga0209130_100057815 433
336 3300025291 Ga0209675_1000400 Ga0209675_100040037 433
337 3300025292 Ga0209676_1000007 Ga0209676_100000787 433
338 3300025294 Ga0209025_1002450 Ga0209025_100245011 433
339 3300025294 Ga0209025_1005008 Ga0209025_10050081 433
340 3300025295 Ga0209564_1001825 Ga0209564_10018254 433
341 3300025298 Ga0209050_1000003 Ga0209050_10000031421 433
342 3300025299 Ga0209256_1000001 Ga0209256_10000011423 433
343 3300025303 Ga0209051_1000003 Ga0209051_10000031421 433
344 3300025304 Ga0209257_1000020 Ga0209257_100002087 433
345 3300031456 Ga0307513_10000011 Ga0307513_10000011353 433
346 3300031548 Ga0307408_100008340 Ga0307408_1000083404 433
347 3300031901 Ga0307406_10075377 Ga0307406_100753772 433
348 3300044673 Ga0453683_0004136 Ga0453683_0004136_734_2056 433
349 3300045051 Ga0451576_0040382 Ga0451576_0040382_2795_4117 433

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

51

384

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rnp-assembly2.cif.gz_B engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9_h275e with 4-cl-trp non-covalently bound 0.9861 13 394
6cuv-assembly1.cif.gz_B engineered holo trpb from pyrococcus furiosus, pftrpb7e6 0.9852 12 395
5ey5-assembly1.cif.gz_D lbcats 0.985 11 393
6ami-assembly1.cif.gz_B engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb4d11 with trp non-covalently bound 0.9847 12 396
6am7-assembly1.cif.gz_B engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9 0.9846 12 394
ID Description Score Start End Superfamily
af_P14671_91_282_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9823 23 208 3.40.50.1100
af_Q60179_69_392_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9812 62 387 3.40.50.1100
af_Q60179_217_401_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9757 212 397 3.40.50.1100
af_Q60179_69_392_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9753 62 387 3.40.50.1100
af_P43283_44_197_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.9706 57 204 3.60.21.10
ID Description Score Start End GO Terms
AF-A0A317YN28-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9995 107 210 GO:0004834
GO:0005737
AF-A0A2X3CN98-F1-model_v4 Tryptophan synthase beta chain (EC 4.2.1.20) 0.9983 97 223 GO:0004834
GO:0005737
AF-Q3HUY4-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9938 95 244 GO:0004834
GO:0005737
AF-A0A3A0UPF1-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9934 96 252 GO:0004834
GO:0005737
AF-A0A140ECE3-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9888 97 275 GO:0004834
GO:0005737

Feature Viewer

pLDDT pTM Quality
86.7 0.86 High
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Predicted Structure (AlphaFold2)

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