F417895

General Info

Members Datasets Scaffolds Average Seq Length
349 213 698 471

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10092828|Ga0163162_100928282
Length 507
Sequence MVVTLPAVWWVRQAAGQQTATDCQWLEGSITMKAMPTEPAALSPHPDRLLPTDPGVRTIARRLYDAVRDLPIISPHGHVDPQLLVDDVPFADPTSLLLQPDHYVTRLLHANGVSLDDLGVAAGPLPEARARAAWRLLCANWHVFRGTPVRYWFDAELSEIFGITQRPSAANADALYDQISDRLAQDAFRPRALMRQFGIEVMATTDDPADDLAPHAALAADPTFAPRVIPTFRPDRYLEPARDGWASAVKQLGAVAGVDVGEYAGYVAALEDRRRYFISHGATSADHSHVDAIAEPLAVAEAQRIYRLALSGQASVEEATAFRRHMVLEMARMSCDDGLVMTLHPGVRRNHHPGTFALYGADTGHDIPVAVEFTNALQPLLERYGTHPNLHLVLFTLDADVFSREVAPLAGFYPSVYAGAPWWFLDNPSAIHGFQQQVTEITGLTRLSGFIDDTRAFCSIPARHDMSRRLDAGFLAGLVAQHRLDEDEALDSITALVADQPRKVFKL

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
99 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
100 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
101 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
102 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
109 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
110 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
111 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
112 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
113 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
114 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
115 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
116 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
117 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
118 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
124 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
127 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
163 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
164 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
185 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 2643221615 Nocardioides sp. Root224 Isolate Unclassified
191 2643221616 Leifsonia sp. Root227 Isolate Unclassified
192 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
193 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
194 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
195 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
196 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
197 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
198 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
199 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
200 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
201 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
202 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
203 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
204 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
205 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
206 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
207 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
208 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
209 2919395869 Microbacterium resistens 2980 Isolate Unclassified
210 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
211 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
212 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
213 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 92.26
Metatranscriptomes 0.86
Isolates 6.88

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 5.44
Nodule 0
Rhizoplane 9.74
Rhizosphere 69.91
Stem 0
Stem Tuber 0.29
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10092828 3300013306 Bacteria 3103
2 JGI25165J46597_1000014 3300003214 Bacteria 390383
3 rootH1_10070069 3300003323 Bacteria 14298
4 Ga0006562J51391_1014906 3300003578 Bacteria 4706
5 Ga0006562J51391_1014908 3300003578 Bacteria 3280
6 Ga0055539_1000008 3300003752 Bacteria 537665
7 Ga0055527_1000023 3300003760 Bacteria 204513
8 Ga0055542_1000023 3300003762 Bacteria 292964
9 Ga0055529_1000180 3300003763 Bacteria 86768
10 Ga0070683_100011734 3300005329 Bacteria 7586
11 Ga0070670_100143984 3300005331 Bacteria 2061
12 Ga0068869_100010432 3300005334 Bacteria 6060
13 Ga0070682_100022623 3300005337 Bacteria 3726
14 Ga0070682_100025269 3300005337 Bacteria 3543
15 Ga0068868_100001143 3300005338 Bacteria 18150
16 Ga0070668_100001149 3300005347 Bacteria 18642
17 Ga0070668_100005193 3300005347 Bacteria 9655
18 Ga0070675_100124424 3300005354 Bacteria 2193
19 Ga0070688_100077810 3300005365 Bacteria 2138
20 Ga0070659_100004852 3300005366 Bacteria 9611
21 Ga0070659_100094008 3300005366 Bacteria 2407
22 Ga0070663_100011455 3300005455 Bacteria 5569
23 Ga0070663_100012501 3300005455 Bacteria 5373
24 Ga0070678_100108264 3300005456 Bacteria 2169
25 Ga0070662_100014530 3300005457 Bacteria 5264
26 Ga0070679_100024531 3300005530 Bacteria 5910
27 Ga0070684_100030721 3300005535 Bacteria 4568
28 Ga0070664_100012156 3300005564 Bacteria 6994
29 Ga0068857_100009610 3300005577 Bacteria 8403
30 Ga0070702_100042672 3300005615 Bacteria 2551
31 Ga0068859_100121525 3300005617 Bacteria 2678
32 Ga0068861_100098337 3300005719 Bacteria 2323
33 Ga0068861_100142921 3300005719 Bacteria 1955
34 Ga0068858_100084489 3300005842 Bacteria 2952
35 Ga0068860_100206164 3300005843 Bacteria 1906
36 Ga0068862_100006824 3300005844 Bacteria 9466
37 Ga0081455_10006050 3300005937 Bacteria 13091
38 Ga0081455_10014113 3300005937 Bacteria 7852
39 Ga0081455_10046145 3300005937 Bacteria 3783
40 Ga0081538_10000495 3300005981 Bacteria 43993
41 Ga0081540_1001114 3300005983 Bacteria 23786
42 Ga0081539_10003681 3300005985 Bacteria 18365
43 Ga0075364_10023340 3300006051 Bacteria 3917
44 Ga0075432_10000263 3300006058 Bacteria 14423
45 Ga0075428_100009724 3300006844 Bacteria 10681
46 Ga0075431_100064936 3300006847 Bacteria 3769
47 Ga0075433_10000586 3300006852 Bacteria 24145
48 Ga0075433_10016329 3300006852 Bacteria 6114
49 Ga0075433_10104965 3300006852 Bacteria 2504
50 Ga0075434_100000520 3300006871 Bacteria 29331
51 Ga0075429_100044015 3300006880 Bacteria 3883
52 Ga0075429_100049480 3300006880 Bacteria 3655
53 Ga0075436_100000544 3300006914 Bacteria 24595
54 Ga0097620_100121530 3300006931 Bacteria 2678
55 Ga0075435_100003588 3300007076 Bacteria 10549
56 Ga0111539_10000029 3300009094 Bacteria 184798
57 Ga0111539_10010523 3300009094 Bacteria 11646
58 Ga0111539_10103935 3300009094 Bacteria 3333
59 Ga0105245_10013804 3300009098 Bacteria 7036
60 Ga0105245_10189087 3300009098 Bacteria 1971
61 Ga0105245_10214315 3300009098 Bacteria 1855
62 Ga0114129_10007810 3300009147 Bacteria 15218
63 Ga0114129_10017856 3300009147 Bacteria 10102
64 Ga0114129_10241913 3300009147 Bacteria 2426
65 Ga0105242_10215015 3300009176 Bacteria 1715
66 Ga0105248_10085695 3300009177 Bacteria 3545
67 Ga0105239_10134066 3300010375 Bacteria 2756
68 Ga0157370_10104684 3300013104 Bacteria 2649
69 Ga0157369_10120682 3300013105 Bacteria 2782
70 Ga0157378_10040482 3300013297 Bacteria 4132
71 Ga0163162_10282203 3300013306 Bacteria 1793
72 Ga0157372_10155119 3300013307 Bacteria 2644
73 Ga0157375_10107523 3300013308 Bacteria 2883
74 Ga0206353_10582655 3300020082 Bacteria 4233
75 Ga0209672_100064 3300025228 Bacteria 204609
76 Ga0209147_101155 3300025229 Bacteria 10839
77 Ga0207427_100041 3300025231 Bacteria 263659
78 Ga0209437_100267 3300025233 Bacteria 79455
79 Ga0209677_100601 3300025253 Bacteria 19466
80 Ga0209148_1000108 3300025254 Bacteria 204609
81 Ga0209233_1000014 3300025261 Bacteria 996641
82 Ga0209455_1000102 3300025272 Bacteria 204609
83 Ga0207656_10021695 3300025321 Bacteria 2569
84 Ga0207688_10000689 3300025901 Bacteria 16679
85 Ga0207645_10054193 3300025907 Bacteria 2562
86 Ga0207652_10043734 3300025921 Bacteria 3814
87 Ga0207652_10181097 3300025921 Bacteria 1894
88 Ga0207687_10089962 3300025927 Bacteria 2236
89 Ga0207690_10075782 3300025932 Bacteria 2334
90 Ga0207706_10008130 3300025933 Bacteria 9680
91 Ga0207709_10098956 3300025935 Bacteria 1924
92 Ga0207689_10005017 3300025942 Bacteria 11924
93 Ga0207689_10103636 3300025942 Bacteria 2338
94 Ga0207661_10081809 3300025944 Bacteria 2668
95 Ga0207668_10000906 3300025972 Bacteria 17835
96 Ga0207668_10010015 3300025972 Bacteria 5706
97 Ga0207668_10017522 3300025972 Bacteria 4488
98 Ga0207678_10082312 3300026067 Bacteria 2754
99 Ga0207678_10090322 3300026067 Bacteria 2618
100 Ga0207708_10161294 3300026075 Bacteria 1771
101 Ga0207702_10074472 3300026078 Bacteria 2931
102 Ga0207675_100005334 3300026118 Bacteria 12351
103 Ga0207675_100170634 3300026118 Bacteria 2079
104 Ga0207683_10039977 3300026121 Bacteria 4092
105 Ga0207683_10072634 3300026121 Bacteria 3043
106 Ga0207428_10000192 3300027907 Bacteria 84942
107 Ga0207428_10008901 3300027907 Bacteria 9043
108 Ga0207428_10135469 3300027907 Bacteria 1883
109 Ga0268265_10082333 3300028380 Bacteria 2545
110 Ga0268264_10124597 3300028381 Bacteria 2275
111 Ga0307515_10000817 3300028794 Bacteria 71687
112 Ga0307515_10004346 3300028794 Bacteria 29398
113 Ga0307515_10021670 3300028794 Bacteria 11375
114 Ga0307515_10033589 3300028794 Bacteria 8436
115 Ga0307512_10005532 3300030522 Bacteria 13158
116 Ga0307512_10005712 3300030522 Bacteria 12839
117 Ga0307513_10005111 3300031456 Bacteria 17367
118 Ga0307513_10076380 3300031456 Bacteria 3474
119 Ga0307513_10105785 3300031456 Bacteria 2822
120 Ga0307509_10057719 3300031507 Bacteria 4114
121 Ga0307408_100009533 3300031548 Bacteria 6406
122 Ga0307408_100081441 3300031548 Bacteria 2420
123 Ga0307508_10006159 3300031616 Bacteria 11316
124 Ga0307508_10010569 3300031616 Bacteria 8446
125 Ga0307508_10079980 3300031616 Bacteria 2850
126 Ga0307508_10081410 3300031616 Bacteria 2819
127 Ga0307516_10000147 3300031730 Bacteria 86945
128 Ga0307516_10031013 3300031730 Bacteria 5392
129 Ga0307516_10040333 3300031730 Bacteria 4648
130 Ga0307516_10092832 3300031730 Bacteria 2845
131 Ga0307413_10002886 3300031824 Bacteria 7096
132 Ga0307413_10007919 3300031824 Bacteria 4973
133 Ga0307413_10047395 3300031824 Bacteria 2562
134 Ga0307413_10106354 3300031824 Bacteria 1867
135 Ga0307410_10000634 3300031852 Bacteria 14511
136 Ga0307410_10005337 3300031852 Bacteria 6790
137 Ga0307410_10040275 3300031852 Bacteria 3074
138 Ga0307406_10001171 3300031901 Bacteria 14694
139 Ga0307406_10004726 3300031901 Bacteria 7418
140 Ga0307406_10009177 3300031901 Bacteria 5540
141 Ga0307406_10022252 3300031901 Bacteria 3758
142 Ga0307406_10046229 3300031901 Bacteria 2738
143 Ga0307406_10087247 3300031901 Bacteria 2091
144 Ga0307407_10000843 3300031903 Bacteria 10230
145 Ga0307407_10009171 3300031903 Bacteria 4592
146 Ga0307407_10046360 3300031903 Bacteria 2461
147 Ga0307409_100002317 3300031995 Bacteria 9879
148 Ga0307409_100005986 3300031995 Bacteria 7087
149 Ga0307409_100009877 3300031995 Bacteria 5891
150 Ga0307409_100013079 3300031995 Bacteria 5321
151 Ga0307416_100006745 3300032002 Bacteria 7219
152 Ga0307416_100010554 3300032002 Bacteria 6107
153 Ga0307416_100021506 3300032002 Bacteria 4633
154 Ga0307416_100043757 3300032002 Bacteria 3509
155 Ga0307416_100088113 3300032002 Bacteria 2653
156 Ga0307415_100001524 3300032126 Bacteria 11112
157 Ga0307415_100004740 3300032126 Bacteria 7117
158 Ga0307415_100013237 3300032126 Bacteria 4808
159 Ga0307415_100019621 3300032126 Bacteria 4109
160 Ga0307415_100023552 3300032126 Bacteria 3825
161 Ga0307415_100048876 3300032126 Bacteria 2856
162 Ga0307507_10053324 3300033179 Bacteria 3865
163 Ga0307507_10136239 3300033179 Bacteria 1901
164 Ga0373940_0010013 3300035088 Bacteria 2218
165 Ga0373951_0000064 3300035091 Bacteria 42472
166 Ga0373942_0000014 3300035207 Bacteria 33319
167 Ga0373962_0009131 3300035242 Bacteria 2450
168 Ga0373935_0021888 3300035692 Bacteria 3915
169 Ga0395899_0006465 3300037312 Bacteria 9078
170 Ga0395899_0098609 3300037312 Bacteria 2111
171 Ga0395900_0024149 3300037418 Bacteria 6223
172 Ga0395898_0000015 3300037466 Bacteria 439819
173 Ga0395898_0049070 3300037466 Bacteria 4137
174 Ga0395901_0012000 3300038443 Bacteria 8790
175 Ga0395901_0084324 3300038443 Bacteria 3321
176 Ga0395901_0299561 3300038443 Bacteria 1667
177 Ga0451791_1385431 3300041451 Bacteria 1628
178 Ga0451791_1894829 3300041451 Bacteria 5369
179 Ga0451793_0391997 3300041452 Bacteria 8256
180 Ga0451797_0972374 3300041453 Bacteria 1830
181 Ga0451795_1513065 3300041456 Bacteria 1754
182 Ga0451843_1535195 3300041509 Bacteria 3692
183 Ga0451855_1094403 3300041511 Bacteria 1723
184 Ga0451853_0818133 3300041512 Bacteria 8706
185 Ga0439463_005337 3300042016 Bacteria 3192
186 Ga0466966_0020567 3300044684 Bacteria 4337
187 Ga0466961_0011943 3300044693 Bacteria 5551
188 Ga0466971_0008902 3300044719 Bacteria 4387
189 Ga0466970_0008900 3300044765 Bacteria 5062
190 Ga0466970_0029701 3300044765 Bacteria 2879
191 Ga0466970_0045159 3300044765 Bacteria 2345
192 Ga0466959_0043849 3300045049 Bacteria 3296
193 Ga0466958_0056114 3300045836 Bacteria 2392
194 Ga0466967_0002248 3300045976 Bacteria 11893
195 Ga0466967_0045005 3300045976 Bacteria 3833
196 Ga0466967_0131932 3300045976 Bacteria 2320
197 Ga0495653_0032841 3300046463 Bacteria 4117
198 Ga0495632_0025314 3300046519 Bacteria 3141
199 Ga0495635_0132849 3300046663 Bacteria 1697
200 Ga0495581_0056627 3300047315 Bacteria 2263
201 Ga0495636_0092116 3300047318 Bacteria 1317
202 Ga0495674_0196054 3300047319 Bacteria 1677
203 Ga0495680_0052805 3300047322 Bacteria 3167
204 Ga0496101_0047625 3300048904 Bacteria 3078
205 Ga0496101_0050335 3300048904 Bacteria 2999
206 Ga0496102_0008468 3300048905 Bacteria 8817
207 Ga0496102_0009716 3300048905 Bacteria 8271
208 Ga0496104_0001758 3300048907 Bacteria 18724
209 Ga0496104_0031284 3300048907 Bacteria 4948
210 Ga0496104_0145052 3300048907 Bacteria 2280
211 Ga0496105_0000734 3300048908 Bacteria 22250
212 Ga0496105_0005228 3300048908 Bacteria 9838
213 Ga0496105_0027148 3300048908 Bacteria 4674
214 Ga0496105_0053624 3300048908 Bacteria 3330
215 Ga0496105_0062582 3300048908 Bacteria 3071
216 Ga0496108_0002569 3300048911 Bacteria 14541
217 Ga0496108_0032438 3300048911 Bacteria 4338
218 Ga0496109_0001794 3300048912 Bacteria 17842
219 Ga0496109_0035737 3300048912 Bacteria 4484
220 Ga0496110_0002255 3300048913 Bacteria 14423
221 Ga0496110_0144680 3300048913 Bacteria 2150
222 Ga0496111_0002912 3300048914 Bacteria 10457
223 Ga0496113_0006034 3300048916 Bacteria 7632
224 Ga0496114_0028320 3300048917 Bacteria 4596
225 Ga0496114_0039071 3300048917 Bacteria 3927
226 Ga0496114_0044130 3300048917 Bacteria 3698
227 Ga0496114_0094646 3300048917 Bacteria 2541
228 Ga0496114_0110670 3300048917 Bacteria 2353
229 Ga0496114_0160100 3300048917 Bacteria 1957
230 Ga0496114_0246059 3300048917 Bacteria 1573
231 Ga0496115_0013637 3300048918 Bacteria 6149
232 Ga0496115_0193364 3300048918 Bacteria 1681
233 Ga0496117_0000561 3300048920 Bacteria 61150
234 Ga0496117_0005423 3300048920 Bacteria 13406
235 Ga0496117_0005687 3300048920 Bacteria 12987
236 Ga0496118_0000705 3300048921 Bacteria 54015
237 Ga0496119_0024853 3300048922 Bacteria 4200
238 Ga0496122_0000105 3300048925 Bacteria 194509
239 Ga0496122_0056475 3300048925 Bacteria 2926
240 Ga0496123_0000075 3300048926 Bacteria 194499
241 Ga0496124_0000234 3300048927 Bacteria 108472
242 Ga0496124_0002596 3300048927 Bacteria 23375
243 Ga0496124_0005117 3300048927 Bacteria 14933
244 Ga0496124_0117316 3300048927 Bacteria 2132
245 Ga0496126_0000611 3300048929 Bacteria 67506
246 Ga0496126_0004233 3300048929 Bacteria 17277
247 Ga0501031_0000118 3300049568 Bacteria 43029
248 Ga0501031_0032356 3300049568 Bacteria 3409
249 Ga0501032_0000229 3300049569 Bacteria 46549
250 Ga0501032_0012412 3300049569 Bacteria 6087
251 Ga0501032_0062704 3300049569 Bacteria 2490
252 Ga0501033_0003149 3300049570 Bacteria 13707
253 Ga0501033_0008313 3300049570 Bacteria 8039
254 Ga0501033_0064121 3300049570 Bacteria 2704
255 Ga0501033_0149255 3300049570 Bacteria 1687
256 Ga0501034_0002627 3300049571 Bacteria 21314
257 Ga0501034_0005293 3300049571 Bacteria 14148
258 Ga0501034_0010262 3300049571 Bacteria 9768
259 Ga0501034_0046190 3300049571 Bacteria 4400
260 Ga0501036_0000613 3300049572 Bacteria 25915
261 Ga0501036_0109820 3300049572 Bacteria 2330
262 Ga0501037_0000435 3300049573 Bacteria 34346
263 Ga0501037_0010376 3300049573 Bacteria 6833
264 Ga0501037_0017663 3300049573 Bacteria 5251
265 Ga0501038_0000090 3300049574 Bacteria 77766
266 Ga0501038_0032410 3300049574 Bacteria 4610
267 Ga0501039_0000116 3300049575 Bacteria 54483
268 Ga0501040_0075777 3300049576 Bacteria 2325
269 Ga0501042_0001776 3300049578 Bacteria 12901
270 Ga0501042_0047406 3300049578 Bacteria 3064
271 Ga0501043_0000527 3300049579 Bacteria 34345
272 Ga0501043_0030249 3300049579 Bacteria 4255
273 Ga0501046_0000349 3300049580 Bacteria 46299
274 Ga0501046_0095827 3300049580 Bacteria 2279
275 Ga0501047_0001030 3300049581 Bacteria 27949
276 Ga0501047_0013796 3300049581 Bacteria 7674
277 Ga0501047_0016248 3300049581 Bacteria 7099
278 Ga0501047_0054517 3300049581 Bacteria 3867
279 Ga0501048_0000105 3300049582 Bacteria 46603
280 Ga0501048_0072971 3300049582 Bacteria 2422
281 Ga0501067_0008139 3300049583 Bacteria 5825
282 Ga0501068_0004995 3300049584 Bacteria 7223
283 Ga0501068_0024566 3300049584 Bacteria 3540
284 Ga0501069_0000539 3300049585 Bacteria 17307
285 Ga0501070_0000063 3300049586 Bacteria 92104
286 Ga0501070_0001447 3300049586 Bacteria 21225
287 Ga0501072_0079067 3300049588 Bacteria 2604
288 Ga0501073_0006724 3300049589 Bacteria 8563
289 Ga0501074_0000816 3300049590 Bacteria 19750
290 Ga0501080_0000377 3300049742 Bacteria 34308
291 Ga0501083_0000253 3300049744 Bacteria 34060
292 Ga0501035_0000439 3300049822 Bacteria 46581
293 Ga0501035_0008693 3300049822 Bacteria 9453
294 Ga0501035_0020116 3300049822 Bacteria 6130
295 Ga0501035_0085807 3300049822 Bacteria 2774
296 Ga0501044_0001040 3300049823 Bacteria 33374
297 Ga0501044_0012426 3300049823 Bacteria 9220
298 Ga0501044_0020530 3300049823 Bacteria 7053
299 Ga0501045_0027471 3300049824 Bacteria 4101
300 Ga0501045_0257211 3300049824 Bacteria 1299
301 nmdc:mga00v17_44516_c1 3300050491 Bacteria 2677
302 nmdc:mga05p37_121213_c1 3300050507 Bacteria 3213
303 nmdc:mga05p37_1856_c1 3300050507 Bacteria 24601
304 nmdc:mga05p37_34472_c1 3300050507 Bacteria 6201
305 nmdc:mga09592_38940_c1 3300050508 Bacteria 3992
306 nmdc:mga09592_8505_c1 3300050508 Bacteria 8345
307 nmdc:mga06r32_110075_c1 3300050510 Bacteria 2709
308 nmdc:mga08y16_324812_c1 3300050511 Bacteria 1584
309 nmdc:mga08y16_4626_c1 3300050511 Bacteria 14339
310 nmdc:mga08y16_4839_c1 3300050511 Bacteria 14054
311 nmdc:mga08y16_9848_c1 3300050511 Bacteria 10035
312 nmdc:mga0n895_24009_c1 3300050512 Bacteria 5740
313 nmdc:mga0n895_467_c1 3300050512 Bacteria 27159
314 nmdc:mga0rr50_2541_c1 3300050513 Bacteria 10336
315 nmdc:mga08x19_424_c1 3300050514 Bacteria 29090
316 nmdc:mga0a205_1671_c1 3300050515 Bacteria 19123
317 nmdc:mga0a205_452_c1 3300050515 Bacteria 31812
318 Ga0495619_0138250 3300053085 Bacteria 1676
319 Ga0500646_0022200 3300053090 Bacteria 1697
320 Ga0500583_0118548 3300053092 Bacteria 1308
321 Ga0500568_0000020 3300053139 Bacteria 188865
322 Ga0500600_0033090 3300053149 Bacteria 3025
323 Ga0501084_0038372 3300054114 Bacteria 4004
324 Ga0501084_0053568 3300054114 Bacteria 3375
325 Ga0501082_0085701 3300060353 Bacteria 2717
326 2644091905 2643221615 Bacteria 5487866
327 2644094296 2643221616 Bacteria 4066575
328 2644321708 2643221657 Bacteria 5490246
329 2730230728 2728369380 Bacteria 3620317
330 2753264171 2751185782 Bacteria 11227053
331 2753301026 2751185788 Bacteria 4541048
332 2819427049 2818991318 Bacteria 5266538
333 2848554065 2848551377 Bacteria 3720646
334 2852663366 2852663356 Bacteria 4090475
335 2857726312 2857723135 Bacteria 4217853
336 2883823205 2883821847 Bacteria 5121194
337 2884763819 2884763398 Bacteria 4091164
338 2887446265 2887443736 Bacteria 4426037
339 2904431078 2904430863 Bacteria 3486923
340 2904503416 2904501621 Bacteria 3401437
341 2908675054 2908674828 Bacteria 3382763
342 2909075624 2909074476 Bacteria 3436050
343 2919039739 2919039151 Bacteria 3391018
344 2919044892 2919042368 Bacteria 3905917
345 2919397587 2919395869 Bacteria 3704152
346 2919525095 2919523602 Bacteria 3788128
347 2928106421 2928104781 Bacteria 3877447
348 2928500756 2928500415 Bacteria 3384541
349 2984553192 2984551494 Bacteria 3877562
350 Ga0163162_10092828
351 JGI25165J46597_1000014
352 rootH1_10070069
353 Ga0006562J51391_1014906
354 Ga0006562J51391_1014908
355 Ga0055539_1000008
356 Ga0055527_1000023
357 Ga0055542_1000023
358 Ga0055529_1000180
359 Ga0070683_100011734
360 Ga0070670_100143984
361 Ga0068869_100010432
362 Ga0070682_100022623
363 Ga0070682_100025269
364 Ga0068868_100001143
365 Ga0070668_100001149
366 Ga0070668_100005193
367 Ga0070675_100124424
368 Ga0070688_100077810
369 Ga0070659_100004852
370 Ga0070659_100094008
371 Ga0070663_100011455
372 Ga0070663_100012501
373 Ga0070678_100108264
374 Ga0070662_100014530
375 Ga0070679_100024531
376 Ga0070684_100030721
377 Ga0070664_100012156
378 Ga0068857_100009610
379 Ga0070702_100042672
380 Ga0068859_100121525
381 Ga0068861_100098337
382 Ga0068861_100142921
383 Ga0068858_100084489
384 Ga0068860_100206164
385 Ga0068862_100006824
386 Ga0081455_10006050
387 Ga0081455_10014113
388 Ga0081455_10046145
389 Ga0081538_10000495
390 Ga0081540_1001114
391 Ga0081539_10003681
392 Ga0075364_10023340
393 Ga0075432_10000263
394 Ga0075428_100009724
395 Ga0075431_100064936
396 Ga0075433_10000586
397 Ga0075433_10016329
398 Ga0075433_10104965
399 Ga0075434_100000520
400 Ga0075429_100044015
401 Ga0075429_100049480
402 Ga0075436_100000544
403 Ga0097620_100121530
404 Ga0075435_100003588
405 Ga0111539_10000029
406 Ga0111539_10010523
407 Ga0111539_10103935
408 Ga0105245_10013804
409 Ga0105245_10189087
410 Ga0105245_10214315
411 Ga0114129_10007810
412 Ga0114129_10017856
413 Ga0114129_10241913
414 Ga0105242_10215015
415 Ga0105248_10085695
416 Ga0105239_10134066
417 Ga0157370_10104684
418 Ga0157369_10120682
419 Ga0157378_10040482
420 Ga0163162_10282203
421 Ga0157372_10155119
422 Ga0157375_10107523
423 Ga0206353_10582655
424 Ga0209672_100064
425 Ga0209147_101155
426 Ga0207427_100041
427 Ga0209437_100267
428 Ga0209677_100601
429 Ga0209148_1000108
430 Ga0209233_1000014
431 Ga0209455_1000102
432 Ga0207656_10021695
433 Ga0207688_10000689
434 Ga0207645_10054193
435 Ga0207652_10043734
436 Ga0207652_10181097
437 Ga0207687_10089962
438 Ga0207690_10075782
439 Ga0207706_10008130
440 Ga0207709_10098956
441 Ga0207689_10005017
442 Ga0207689_10103636
443 Ga0207661_10081809
444 Ga0207668_10000906
445 Ga0207668_10010015
446 Ga0207668_10017522
447 Ga0207678_10082312
448 Ga0207678_10090322
449 Ga0207708_10161294
450 Ga0207702_10074472
451 Ga0207675_100005334
452 Ga0207675_100170634
453 Ga0207683_10039977
454 Ga0207683_10072634
455 Ga0207428_10000192
456 Ga0207428_10008901
457 Ga0207428_10135469
458 Ga0268265_10082333
459 Ga0268264_10124597
460 Ga0307515_10000817
461 Ga0307515_10004346
462 Ga0307515_10021670
463 Ga0307515_10033589
464 Ga0307512_10005532
465 Ga0307512_10005712
466 Ga0307513_10005111
467 Ga0307513_10076380
468 Ga0307513_10105785
469 Ga0307509_10057719
470 Ga0307408_100009533
471 Ga0307408_100081441
472 Ga0307508_10006159
473 Ga0307508_10010569
474 Ga0307508_10079980
475 Ga0307508_10081410
476 Ga0307516_10000147
477 Ga0307516_10031013
478 Ga0307516_10040333
479 Ga0307516_10092832
480 Ga0307413_10002886
481 Ga0307413_10007919
482 Ga0307413_10047395
483 Ga0307413_10106354
484 Ga0307410_10000634
485 Ga0307410_10005337
486 Ga0307410_10040275
487 Ga0307406_10001171
488 Ga0307406_10004726
489 Ga0307406_10009177
490 Ga0307406_10022252
491 Ga0307406_10046229
492 Ga0307406_10087247
493 Ga0307407_10000843
494 Ga0307407_10009171
495 Ga0307407_10046360
496 Ga0307409_100002317
497 Ga0307409_100005986
498 Ga0307409_100009877
499 Ga0307409_100013079
500 Ga0307416_100006745
501 Ga0307416_100010554
502 Ga0307416_100021506
503 Ga0307416_100043757
504 Ga0307416_100088113
505 Ga0307415_100001524
506 Ga0307415_100004740
507 Ga0307415_100013237
508 Ga0307415_100019621
509 Ga0307415_100023552
510 Ga0307415_100048876
511 Ga0307507_10053324
512 Ga0307507_10136239
513 Ga0373940_0010013
514 Ga0373951_0000064
515 Ga0373942_0000014
516 Ga0373962_0009131
517 Ga0373935_0021888
518 Ga0395899_0006465
519 Ga0395899_0098609
520 Ga0395900_0024149
521 Ga0395898_0000015
522 Ga0395898_0049070
523 Ga0395901_0012000
524 Ga0395901_0084324
525 Ga0395901_0299561
526 Ga0451791_1385431
527 Ga0451791_1894829
528 Ga0451793_0391997
529 Ga0451797_0972374
530 Ga0451795_1513065
531 Ga0451843_1535195
532 Ga0451855_1094403
533 Ga0451853_0818133
534 Ga0439463_005337
535 Ga0466966_0020567
536 Ga0466961_0011943
537 Ga0466971_0008902
538 Ga0466970_0008900
539 Ga0466970_0029701
540 Ga0466970_0045159
541 Ga0466959_0043849
542 Ga0466958_0056114
543 Ga0466967_0002248
544 Ga0466967_0045005
545 Ga0466967_0131932
546 Ga0495653_0032841
547 Ga0495632_0025314
548 Ga0495635_0132849
549 Ga0495581_0056627
550 Ga0495636_0092116
551 Ga0495674_0196054
552 Ga0495680_0052805
553 Ga0496101_0047625
554 Ga0496101_0050335
555 Ga0496102_0008468
556 Ga0496102_0009716
557 Ga0496104_0001758
558 Ga0496104_0031284
559 Ga0496104_0145052
560 Ga0496105_0000734
561 Ga0496105_0005228
562 Ga0496105_0027148
563 Ga0496105_0053624
564 Ga0496105_0062582
565 Ga0496108_0002569
566 Ga0496108_0032438
567 Ga0496109_0001794
568 Ga0496109_0035737
569 Ga0496110_0002255
570 Ga0496110_0144680
571 Ga0496111_0002912
572 Ga0496113_0006034
573 Ga0496114_0028320
574 Ga0496114_0039071
575 Ga0496114_0044130
576 Ga0496114_0094646
577 Ga0496114_0110670
578 Ga0496114_0160100
579 Ga0496114_0246059
580 Ga0496115_0013637
581 Ga0496115_0193364
582 Ga0496117_0000561
583 Ga0496117_0005423
584 Ga0496117_0005687
585 Ga0496118_0000705
586 Ga0496119_0024853
587 Ga0496122_0000105
588 Ga0496122_0056475
589 Ga0496123_0000075
590 Ga0496124_0000234
591 Ga0496124_0002596
592 Ga0496124_0005117
593 Ga0496124_0117316
594 Ga0496126_0000611
595 Ga0496126_0004233
596 Ga0501031_0000118
597 Ga0501031_0032356
598 Ga0501032_0000229
599 Ga0501032_0012412
600 Ga0501032_0062704
601 Ga0501033_0003149
602 Ga0501033_0008313
603 Ga0501033_0064121
604 Ga0501033_0149255
605 Ga0501034_0002627
606 Ga0501034_0005293
607 Ga0501034_0010262
608 Ga0501034_0046190
609 Ga0501036_0000613
610 Ga0501036_0109820
611 Ga0501037_0000435
612 Ga0501037_0010376
613 Ga0501037_0017663
614 Ga0501038_0000090
615 Ga0501038_0032410
616 Ga0501039_0000116
617 Ga0501040_0075777
618 Ga0501042_0001776
619 Ga0501042_0047406
620 Ga0501043_0000527
621 Ga0501043_0030249
622 Ga0501046_0000349
623 Ga0501046_0095827
624 Ga0501047_0001030
625 Ga0501047_0013796
626 Ga0501047_0016248
627 Ga0501047_0054517
628 Ga0501048_0000105
629 Ga0501048_0072971
630 Ga0501067_0008139
631 Ga0501068_0004995
632 Ga0501068_0024566
633 Ga0501069_0000539
634 Ga0501070_0000063
635 Ga0501070_0001447
636 Ga0501072_0079067
637 Ga0501073_0006724
638 Ga0501074_0000816
639 Ga0501080_0000377
640 Ga0501083_0000253
641 Ga0501035_0000439
642 Ga0501035_0008693
643 Ga0501035_0020116
644 Ga0501035_0085807
645 Ga0501044_0001040
646 Ga0501044_0012426
647 Ga0501044_0020530
648 Ga0501045_0027471
649 Ga0501045_0257211
650 nmdc:mga00v17_44516_c1
651 nmdc:mga05p37_121213_c1
652 nmdc:mga05p37_1856_c1
653 nmdc:mga05p37_34472_c1
654 nmdc:mga09592_38940_c1
655 nmdc:mga09592_8505_c1
656 nmdc:mga06r32_110075_c1
657 nmdc:mga08y16_324812_c1
658 nmdc:mga08y16_4626_c1
659 nmdc:mga08y16_4839_c1
660 nmdc:mga08y16_9848_c1
661 nmdc:mga0n895_24009_c1
662 nmdc:mga0n895_467_c1
663 nmdc:mga0rr50_2541_c1
664 nmdc:mga08x19_424_c1
665 nmdc:mga0a205_1671_c1
666 nmdc:mga0a205_452_c1
667 Ga0495619_0138250
668 Ga0500646_0022200
669 Ga0500583_0118548
670 Ga0500568_0000020
671 Ga0500600_0033090
672 Ga0501084_0038372
673 Ga0501084_0053568
674 Ga0501082_0085701
675 2644091905
676 2644094296
677 2644321708
678 2730230728
679 2753264171
680 2753301026
681 2819427049
682 2848554065
683 2852663366
684 2857726312
685 2883823205
686 2884763819
687 2887446265
688 2904431078
689 2904503416
690 2908675054
691 2909075624
692 2919039739
693 2919044892
694 2919397587
695 2919525095
696 2928106421
697 2928500756
698 2984553192

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02614

UxaC

Glucuronate isomerase

56

502

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2q01-assembly1.cif.gz_A crystal structure of glucuronate isomerase from caulobacter crescentus 0.9734 3 470
2q01-assembly1.cif.gz_A crystal structure of glucuronate isomerase from caulobacter crescentus 0.9633 3 470
1j5s-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9525 7 468
1j5s-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9402 7 468
3iac-assembly1.cif.gz_B 2.2 angstrom crystal structure of glucuronate isomerase from salmonella typhimurium. 0.908 6 471
ID Description Score Start End Superfamily
2q01B01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9687 5 470 3.20.20.140
2q01C02 Mainly Alpha;Orthogonal Bundle;uronate isomerase, domain 2, chain A;uronate isomerase, domain 2, chain A 0.953 51 149 1.10.2020.10
1j5sC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9488 7 468 3.20.20.140
1j5sC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.936 7 468 3.20.20.140
2q01C02 Mainly Alpha;Orthogonal Bundle;uronate isomerase, domain 2, chain A;uronate isomerase, domain 2, chain A 0.9349 51 149 1.10.2020.10
ID Description Score Start End GO Terms
AF-U3PB94-F1-model_v4 Uronate isomerase (EC 5.3.1.12) 0.9825 113 471 GO:0008880
GO:0019698
GO:0042840
AF-A0A7V6VKA1-F1-model_v4 Uronate isomerase (EC 5.3.1.12) 0.9797 231 470 GO:0008880
GO:0019698
GO:0042840
AF-A0A4Q2L340-F1-model_v4 Uronate isomerase (EC 5.3.1.12) 0.9786 6 470 GO:0008880
GO:0019698
GO:0042840
AF-U3PB94-F1-model_v4 Uronate isomerase (EC 5.3.1.12) 0.9771 113 471 GO:0008880
GO:0019698
GO:0042840
AF-A0A7X6NWM4-F1-model_v4 Uronate isomerase (EC 5.3.1.12) 0.9763 112 470 GO:0008880
GO:0019698
GO:0042840

Map