F416567

General Info

Members Datasets Scaffolds Average Seq Length
345 251 270 533

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_173903_c1|nmdc:mga08y16_173903_c1_207_2009
Length 585
Sequence LRLCAFAVDLFSNSFHHTQTIPIVGIAFFFASSRLCGKNLRGHPYCIPINLLIFAAYFVLNMIAANNLSLQFGKRVLFDDVNLKFTSGNCYGVIGANGAGKSTFLKILSGEIDPTRGNISIEPGKRMAVLRQDHHEFDEVAVLDTVMMGHTKLWSIMKEKDAIYEKPDFSEEDGIRASELEAEFAEMNGWNAQSDAAALLSGLGIDEEEHFKLVKELGGNQKVRVLLAQAIFGNPDILILDEPTNDLDIHSITWLEDFLLEFKNTVIVVSHDRHFLDTVCTHIVDIDFSAIKLFTGNYSFWYQSSQLALSLQEFIARFSANASKSRQATSRRKLLEKINVDDIQPSNRRYPAIIYQQKRTAGDQILHVENLTYSQNGNTLFKNLDFYVNKGDKIAFLSKESLAITSLFQILVNEIKPEKGTFKFGQTITTAYLPNNNVDFFTSNDNLIDWLRQFAEDENKDEVYIRGFLGKMLFSGEEVFKKCNVLSGGEKVRCMISRMMLAGGNVLILDEPTNHLDLESITAFNNALKDFPGTVLFTSHDHEFTQTVANRIIEITPNGFIDKLMSYDEYITSEKVSEQKVALYA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
4 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
5 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
6 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
7 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
8 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
9 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
10 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
11 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
12 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
13 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
14 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
15 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
16 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
17 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
18 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
19 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
20 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
21 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
22 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
23 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
24 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
25 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
26 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
27 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
28 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
29 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
30 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
31 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
32 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
33 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
34 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
35 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
36 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
37 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
38 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
39 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
40 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
41 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
42 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
43 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
44 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
45 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
46 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
47 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
48 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
49 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
50 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
51 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
52 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
53 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
54 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
55 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
56 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
57 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
58 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
59 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
60 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
61 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
62 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
63 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
64 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
65 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
66 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
67 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
68 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
69 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
70 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
71 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
72 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
73 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
74 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
75 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
76 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
77 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
78 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
79 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
80 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
81 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
82 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
83 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
84 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
85 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
86 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
87 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
88 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
89 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
90 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
91 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
92 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
93 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
94 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
95 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
96 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
97 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
98 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
99 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
100 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
101 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
102 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
103 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
104 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
105 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
106 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
107 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
108 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
109 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
110 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
111 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
112 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
113 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
114 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
115 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
116 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
117 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
118 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
119 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
120 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
121 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
122 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
123 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
124 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
145 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
146 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
147 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
148 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
150 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
151 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
152 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
153 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
154 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
155 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
156 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
157 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
158 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
159 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
160 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
161 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
162 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
163 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
164 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
165 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
166 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
167 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
168 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
169 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
170 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
171 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
172 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
173 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
174 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
175 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
176 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
177 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
178 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
179 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
180 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
181 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
182 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
183 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
184 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
185 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
186 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
187 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
188 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
189 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
190 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
191 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
192 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
193 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
194 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
195 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
196 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
197 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
198 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
199 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
200 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
201 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
202 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
203 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
204 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
205 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
206 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
207 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
208 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
209 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
210 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
211 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
212 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
215 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
216 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
217 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
218 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
219 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
220 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
221 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
222 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
223 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
224 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
225 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
226 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
227 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
228 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
229 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
230 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
231 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
232 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
233 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
234 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
235 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
236 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
237 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
238 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
239 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
240 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
241 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
242 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
243 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
244 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
245 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
246 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
247 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
248 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
249 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
250 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
251 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.39
Metatranscriptomes 0
Isolates 22.61

Biome Distribution

Category Percentage (%)
Aerial Root 0.58
Bulb 0
Endosphere 6.09
Nodule 1.74
Rhizoplane 2.03
Rhizosphere 72.75
Stem 0
Stem Tuber 0
Unclassified 16.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1423761 2162886007 Bacteria 2829
2 SwRhRL2b_contig_1496964 2162886007 Bacteria 130484
3 rootH1_10011647 3300003316 Bacteria 23921
4 rootH1_10011647 3300003323 Bacteria 2102
5 rootL2_10000031 3300003322 Bacteria 37944
6 rootH1_10003890 3300003316 Bacteria 2811
7 rootH1_10003890 3300003323 Bacteria 31835
8 rootH1_10021665 3300003323 Bacteria 18512
9 rootH1_10026860 3300003323 Bacteria 12091
10 rootH1_10102661 3300003316 Bacteria 1646
11 rootH1_10102661 3300003323 Bacteria 3506
12 rootH1_10130353 3300003323 Bacteria 3579
13 Ga0055536_1003810 3300003781 Bacteria 7945
14 Ga0055531_10000212 3300003794 Bacteria 63711
15 Ga0065165_1000145 3300005262 Bacteria 123255
16 Ga0065165_1002590 3300005262 Bacteria 14864
17 Ga0065714_10064633 3300005288 Bacteria 26859
18 Ga0065704_10070178 3300005289 Bacteria 132449
19 Ga0065704_10071690 3300005289 Bacteria 10252
20 Ga0065704_10071718 3300005289 Bacteria 10130
21 Ga0065704_10105094 3300005289 Bacteria 2121
22 Ga0070682_100000199 3300005337 Bacteria 44464
23 Ga0070689_100000011 3300005340 Bacteria 218327
24 Ga0070689_100034286 3300005340 Bacteria 3872
25 Ga0070668_100078777 3300005347 Bacteria 2578
26 Ga0070673_100050415 3300005364 Bacteria 3255
27 Ga0070673_100122889 3300005364 Bacteria 2168
28 Ga0070688_100012799 3300005365 Bacteria 4711
29 Ga0070679_100032689 3300005530 Bacteria 5148
30 Ga0070684_100115621 3300005535 Bacteria 2409
31 Ga0068853_100001840 3300005539 Bacteria 15598
32 Ga0070665_100009483 3300005548 Bacteria 9850
33 Ga0070665_100074577 3300005548 Bacteria 3399
34 Ga0068854_100038819 3300005578 Bacteria 3351
35 Ga0068856_100015303 3300005614 Bacteria 7413
36 Ga0068856_100073993 3300005614 Bacteria 3373
37 Ga0068852_100155153 3300005616 Bacteria 2132
38 Ga0068859_100043366 3300005617 Bacteria 4520
39 Ga0068861_100013183 3300005719 Bacteria 5783
40 Ga0075428_100040820 3300006844 Bacteria 5104
41 Ga0097620_100043365 3300006931 Bacteria 4520
42 Ga0099824_1003979 3300006942 Bacteria 21379
43 Ga0079104_1000108 3300006946 Bacteria 122180
44 Ga0099826_10000178 3300006948 Bacteria 26634
45 Ga0105244_10000160 3300009036 Bacteria 69914
46 Ga0105244_10000292 3300009036 Bacteria 49061
47 Ga0105250_10007351 3300009092 Bacteria 4734
48 Ga0105240_10000101 3300009093 Bacteria 175584
49 Ga0105240_10293782 3300009093 Bacteria 1862
50 Ga0111539_10051813 3300009094 Bacteria 4887
51 Ga0105243_10030245 3300009148 Bacteria 4167
52 Ga0105237_10002943 3300009545 Bacteria 20612
53 Ga0105237_10115539 3300009545 Bacteria 2677
54 Ga0105238_10005093 3300009551 Bacteria 12995
55 Ga0105249_10009283 3300009553 Bacteria 8601
56 Ga0105239_10000277 3300010375 Bacteria 75496
57 Ga0105239_10027489 3300010375 Bacteria 6262
58 Ga0157373_10000001 3300013100 Bacteria 864756
59 Ga0157373_10000006 3300013100 Bacteria 261768
60 Ga0157371_10000019 3300013102 Bacteria 307914
61 Ga0157370_10000026 3300013104 Bacteria 152092
62 Ga0157370_10000225 3300013104 Bacteria 71924
63 Ga0157370_10001772 3300013104 Bacteria 26620
64 Ga0157370_10005786 3300013104 Bacteria 13815
65 Ga0157370_10026301 3300013104 Bacteria 5747
66 Ga0157370_10109883 3300013104 Bacteria 2577
67 Ga0157369_10000436 3300013105 Bacteria 55545
68 Ga0157369_10009301 3300013105 Bacteria 11243
69 Ga0157374_10031484 3300013296 Bacteria 4822
70 Ga0163162_10007468 3300013306 Bacteria 10633
71 Ga0157372_10000594 3300013307 Bacteria 39451
72 Ga0157375_10003751 3300013308 Bacteria 13179
73 Ga0157380_10000033 3300014326 Bacteria 86616
74 Ga0157380_10021502 3300014326 Bacteria 4840
75 Ga0157380_10032642 3300014326 Bacteria 4007
76 Ga0182008_10000003 3300014497 Bacteria 456880
77 Ga0182006_1000001 3300015261 Bacteria 1091090
78 Ga0163161_10000061 3300017792 Bacteria 112295
79 Ga0163161_10013478 3300017792 Bacteria 5692
80 Ga0163161_10025104 3300017792 Bacteria 4215
81 Ga0209675_1000200 3300025291 Bacteria 63684
82 Ga0209676_1000405 3300025292 Bacteria 77810
83 Ga0209257_1000007 3300025304 Bacteria 1564415
84 Ga0207655_1000012 3300025728 Bacteria 640488
85 Ga0207655_1000016 3300025728 Bacteria 551476
86 Ga0207713_1034401 3300025735 Bacteria 2201
87 Ga0207647_10007137 3300025904 Bacteria 8101
88 Ga0207695_10000020 3300025913 Bacteria 723025
89 Ga0207695_10012575 3300025913 Bacteria 10143
90 Ga0207671_10000443 3300025914 Bacteria 57065
91 Ga0207671_10118662 3300025914 Bacteria 2020
92 Ga0207660_10108093 3300025917 Bacteria 2088
93 Ga0207652_10041509 3300025921 Bacteria 3911
94 Ga0207650_10093181 3300025925 Bacteria 2305
95 Ga0207709_10000355 3300025935 Bacteria 46675
96 Ga0207670_10000005 3300025936 Bacteria 431451
97 Ga0207670_10092196 3300025936 Bacteria 2144
98 Ga0207691_10121437 3300025940 Bacteria 2315
99 Ga0207661_10055086 3300025944 Bacteria 3188
100 Ga0207668_10047995 3300025972 Bacteria 2927
101 Ga0207640_10013418 3300025981 Bacteria 4695
102 Ga0207702_10090826 3300026078 Bacteria 2673
103 Ga0207641_10173577 3300026088 Bacteria 1970
104 Ga0207674_10144541 3300026116 Bacteria 2337
105 Ga0207675_100035268 3300026118 Bacteria 4666
106 Ga0209281_1000208 3300027111 Bacteria 132254
107 Ga0209489_113393 3300027361 Bacteria 6631
108 Ga0209995_1002860 3300027471 Bacteria 2738
109 Ga0209968_1001086 3300027526 Bacteria 4149
110 Ga0268266_10057662 3300028379 Bacteria 3342
111 Ga0307515_10000872 3300028794 Bacteria 69248
112 Ga0307515_10031753 3300028794 Bacteria 8783
113 Ga0265338_10039530 3300028800 Bacteria 4448
114 Ga0265327_10000009 3300031251 Bacteria 616360
115 Ga0265327_10000485 3300031251 Bacteria 69994
116 Ga0265327_10011556 3300031251 Bacteria 6063
117 Ga0265316_10009469 3300031344 Bacteria 8972
118 Ga0307509_10029793 3300031507 Bacteria 6051
119 Ga0307509_10129368 3300031507 Bacteria 2484
120 Ga0307408_100000271 3300031548 Bacteria 52116
121 Ga0307405_10000021 3300031731 Bacteria 155876
122 Ga0307405_10016323 3300031731 Bacteria 4048
123 Ga0307413_10000121 3300031824 Bacteria 20293
124 Ga0307410_10000383 3300031852 Bacteria 17335
125 Ga0307406_10000455 3300031901 Bacteria 23789
126 Ga0307407_10048350 3300031903 Bacteria 2420
127 Ga0307412_10000036 3300031911 Bacteria 192270
128 Ga0307412_10000676 3300031911 Bacteria 19775
129 Ga0307412_10001291 3300031911 Bacteria 14048
130 Ga0307412_10017836 3300031911 Bacteria 4256
131 Ga0307416_100000006 3300032002 Bacteria 466074
132 Ga0307416_100001014 3300032002 Bacteria 14879
133 Ga0307416_100141685 3300032002 Bacteria 2186
134 Ga0307414_10000008 3300032004 Bacteria 375832
135 Ga0307414_10000043 3300032004 Bacteria 137764
136 Ga0307414_10000853 3300032004 Bacteria 15550
137 Ga0307411_10000018 3300032005 Bacteria 87365
138 Ga0307411_10020282 3300032005 Bacteria 3862
139 Ga0307510_10056866 3300033180 Bacteria 4067
140 Ga0373950_0000032 3300034818 Bacteria 159066
141 Ga0395905_0000001 3300037471 Bacteria 2037079
142 Ga0439466_0000213 3300041411 Bacteria 22681
143 Ga0439465_0000931 3300041413 Bacteria 9268
144 Ga0451807_0482287 3300041486 Bacteria 3108
145 Ga0439445_0000099 3300042004 Bacteria 14065
146 Ga0451577_0000180 3300042876 Bacteria 135209
147 Ga0451577_0079155 3300042876 Bacteria 2930
148 Ga0451577_0170762 3300042876 Bacteria 1959
149 Ga0451577_0203578 3300042876 Unclassified 1787
150 Ga0453683_0000180 3300044673 Bacteria 88083
151 Ga0453683_0046158 3300044673 Bacteria 2732
152 Ga0453684_0000587 3300044712 Bacteria 135209
153 Ga0453684_0000598 3300044712 Bacteria 133485
154 Ga0453684_0000721 3300044712 Bacteria 116843
155 Ga0453684_0002341 3300044712 Bacteria 46360
156 Ga0453684_0002883 3300044712 Bacteria 40338
157 Ga0453684_0011729 3300044712 Bacteria 14612
158 Ga0453684_0243828 3300044712 Bacteria 2067
159 Ga0451576_0000235 3300045051 Bacteria 135209
160 Ga0451576_0001369 3300045051 Bacteria 41890
161 Ga0451576_0009250 3300045051 Bacteria 11452
162 Ga0451576_0028450 3300045051 Bacteria 5986
163 Ga0451576_0069249 3300045051 Bacteria 3671
164 Ga0451576_0069541 3300045051 Bacteria 3664
165 Ga0495627_000022 3300046453 Bacteria 254672
166 Ga0495627_005939 3300046453 Bacteria 4851
167 Ga0495590_0001734 3300046457 Bacteria 9250
168 Ga0495638_0000036 3300046460 Bacteria 275731
169 Ga0495596_0001074 3300046500 Bacteria 16234
170 Ga0495607_0007492 3300046501 Bacteria 7544
171 Ga0495606_0002399 3300046507 Bacteria 21899
172 Ga0495606_0019181 3300046507 Bacteria 5099
173 Ga0495610_0000005 3300046512 Bacteria 924111
174 Ga0495616_0005163 3300046513 Bacteria 8096
175 Ga0495632_0003246 3300046519 Bacteria 11655
176 Ga0495643_0004254 3300046522 Bacteria 10105
177 Ga0495663_0000053 3300046525 Bacteria 53554
178 Ga0495663_0021438 3300046525 Bacteria 1861
179 Ga0495654_0000003 3300046530 Bacteria 863485
180 Ga0495654_0063809 3300046530 Bacteria 1763
181 Ga0495609_0000311 3300046538 Bacteria 43792
182 Ga0495633_0000350 3300046558 Bacteria 50537
183 Ga0495668_0000074 3300046616 Bacteria 163635
184 Ga0495625_0000096 3300046660 Bacteria 142609
185 Ga0495613_0032159 3300046689 Bacteria 3897
186 Ga0495636_0000020 3300047318 Bacteria 75085
187 Ga0495686_0000133 3300047472 Bacteria 151597
188 Ga0495686_0000492 3300047472 Bacteria 57976
189 Ga0496100_0057746 3300048903 Bacteria 2543
190 Ga0496102_0022707 3300048905 Bacteria 5561
191 Ga0496114_0000239 3300048917 Bacteria 40099
192 Ga0496115_0022287 3300048918 Bacteria 4906
193 Ga0496115_0044580 3300048918 Bacteria 3539
194 Ga0496115_0083278 3300048918 Bacteria 2607
195 Ga0496116_0000004 3300048919 Bacteria 839841
196 Ga0496116_0000029 3300048919 Bacteria 422187
197 Ga0496117_0000007 3300048920 Bacteria 720505
198 Ga0496118_0002335 3300048921 Bacteria 25725
199 Ga0496118_0052552 3300048921 Bacteria 3106
200 Ga0496119_0000007 3300048922 Bacteria 475920
201 Ga0496122_0000946 3300048925 Bacteria 52631
202 Ga0496122_0001529 3300048925 Bacteria 36799
203 Ga0496122_0003233 3300048925 Bacteria 21644
204 Ga0496122_0003623 3300048925 Bacteria 20097
205 Ga0496123_0005169 3300048926 Bacteria 13275
206 Ga0496123_0009812 3300048926 Bacteria 8550
207 Ga0496123_0021024 3300048926 Bacteria 5085
208 Ga0496124_0001116 3300048927 Bacteria 42242
209 Ga0496125_0000082 3300048928 Bacteria 227300
210 Ga0496125_0000382 3300048928 Bacteria 82312
211 Ga0496125_0002205 3300048928 Bacteria 25986
212 Ga0496125_0013699 3300048928 Bacteria 7956
213 Ga0496126_0008656 3300048929 Bacteria 10935
214 Ga0496126_0014674 3300048929 Bacteria 7909
215 Ga0501300_001918 3300049523 Bacteria 3109
216 Ga0501032_0091124 3300049569 Bacteria 2023
217 Ga0501034_0000009 3300049571 Bacteria 336590
218 Ga0501034_0006708 3300049571 Bacteria 12343
219 Ga0501036_0038506 3300049572 Bacteria 4047
220 Ga0501036_0086886 3300049572 Bacteria 2643
221 Ga0501043_0003417 3300049579 Bacteria 13050
222 Ga0501043_0100897 3300049579 Bacteria 2269
223 Ga0501046_0000069 3300049580 Bacteria 112814
224 Ga0501047_0000006 3300049581 Bacteria 455727
225 Ga0501047_0058714 3300049581 Bacteria 3716
226 Ga0501048_0000382 3300049582 Bacteria 30787
227 Ga0501068_0008022 3300049584 Bacteria 5857
228 Ga0501069_0003913 3300049585 Bacteria 7679
229 Ga0501070_0000370 3300049586 Bacteria 40942
230 Ga0501072_0000121 3300049588 Bacteria 57574
231 Ga0501073_0005742 3300049589 Bacteria 9277
232 Ga0501073_0015883 3300049589 Bacteria 5456
233 Ga0501074_0000564 3300049590 Bacteria 22961
234 Ga0501223_007415 3300049663 Bacteria 2246
235 Ga0501238_000069 3300049671 Bacteria 16725
236 Ga0501249_000006 3300049679 Bacteria 224148
237 Ga0501257_005526 3300049686 Bacteria 2789
238 Ga0501079_0006192 3300049741 Bacteria 8978
239 Ga0501080_0000929 3300049742 Bacteria 23924
240 Ga0501083_0000387 3300049744 Bacteria 27960
241 Ga0501083_0007032 3300049744 Bacteria 7989
242 Ga0501083_0009866 3300049744 Bacteria 6742
243 Ga0501241_000002 3300049758 Bacteria 194532
244 Ga0501264_000201 3300049761 Bacteria 9719
245 Ga0501266_000017 3300049763 Bacteria 155699
246 Ga0501269_000004 3300049766 Bacteria 91854
247 Ga0501269_001022 3300049766 Bacteria 3980
248 Ga0501280_002423 3300049776 Bacteria 3115
249 Ga0501035_0003967 3300049822 Bacteria 14104
250 nmdc:mga08y16_173903_c1 3300050511 Bacteria 2236
251 nmdc:mga08y16_83214_c1 3300050511 Bacteria 3335
252 Ga0500643_003554 3300053087 Bacteria 7422
253 Ga0500641_0000009 3300053096 Bacteria 173260
254 Ga0500641_0000084 3300053096 Bacteria 37445
255 Ga0500641_0002806 3300053096 Bacteria 6173
256 Ga0500557_003370 3300053105 Bacteria 3162
257 Ga0500594_0001768 3300053118 Bacteria 4700
258 Ga0500658_0000035 3300053134 Bacteria 87202
259 Ga0500559_0039911 3300053136 Bacteria 2043
260 Ga0500616_0000004 3300053153 Bacteria 1002714
261 Ga0500616_0000572 3300053153 Bacteria 44820
262 Ga0500622_0000010 3300053156 Bacteria 398804
263 Ga0500622_0000035 3300053156 Bacteria 182924
264 Ga0500627_0005096 3300053158 Bacteria 4316
265 Ga0500584_003091 3300053726 Bacteria 6501
266 Ga0501084_0000011 3300054114 Bacteria 185712
267 Ga0501084_0011236 3300054114 Bacteria 7412
268 Ga0501082_0000650 3300060353 Bacteria 30670
269 Ga0501082_0023422 3300060353 Bacteria 5327
270 Ga0501082_0025807 3300060353 Bacteria 5064

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0203578 Ga0451577_0203578_348_1760 448
2 3300042876 Ga0451577_0170762 Ga0451577_0170762_17_1429 449
3 3300013307 Ga0157372_10000594 Ga0157372_100005947 475
4 3300003323 rootH1_10130353 rootH1_101303532 481
5 3300053156 Ga0500622_0000010 Ga0500622_0000010_80512_82131 482
6 3300005614 Ga0068856_100073993 Ga0068856_1000739933 483
7 3300026078 Ga0207702_10090826 Ga0207702_100908263 483
8 3300049663 Ga0501223_007415 Ga0501223_007415_39_1574 486
9 3300049586 Ga0501070_0000370 Ga0501070_0000370_22654_24264 491
10 3300049589 Ga0501073_0015883 Ga0501073_0015883_3488_5098 491
11 3300049744 Ga0501083_0007032 Ga0501083_0007032_3468_5078 491
12 3300049569 Ga0501032_0091124 Ga0501032_0091124_28_1641 493
13 3300005288 Ga0065714_10064633 Ga0065714_100646331 497
14 3300005289 Ga0065704_10105094 Ga0065704_101050941 497
15 3300005347 Ga0070668_100078777 Ga0070668_1000787772 497
16 3300048926 Ga0496123_0005169 Ga0496123_0005169_45_1601 497
17 3300005719 Ga0068861_100013183 Ga0068861_1000131834 500
18 3300026118 Ga0207675_100035268 Ga0207675_1000352684 500
19 3300031344 Ga0265316_10009469 Ga0265316_100094694 500
20 3300044712 Ga0453684_0000721 Ga0453684_0000721_29539_31152 502
21 3300048918 Ga0496115_0083278 Ga0496115_0083278_42_1619 504
22 3300005530 Ga0070679_100032689 Ga0070679_1000326895 507
23 3300025917 Ga0207660_10108093 Ga0207660_101080932 507
24 3300025921 Ga0207652_10041509 Ga0207652_100415093 507
25 3300046689 Ga0495613_0032159 Ga0495613_0032159_179_1786 507
26 3300049523 Ga0501300_001918 Ga0501300_001918_1037_2656 507
27 3300053087 Ga0500643_003554 Ga0500643_003554_1744_3333 507
28 3300053156 Ga0500622_0000035 Ga0500622_0000035_101481_103100 508
29 3300013296 Ga0157374_10031484 Ga0157374_100314845 509
30 3300026116 Ga0207674_10144541 Ga0207674_101445412 509
31 3300031507 Ga0307509_10029793 Ga0307509_100297934 509
32 3300044712 Ga0453684_0002341 Ga0453684_0002341_34815_36443 509
33 3300049744 Ga0501083_0009866 Ga0501083_0009866_844_2463 510
34 3300054114 Ga0501084_0011236 Ga0501084_0011236_5162_6781 510
35 3300060353 Ga0501082_0025807 Ga0501082_0025807_2686_4305 510
36 iso_pu_bacteria 2881955468 2881957201 512
37 iso_pu_bacteria 2898907183 2898911201 512
38 iso_pu_bacteria 2910245624 2910247601 512
39 iso_pu_bacteria 2739367874 2740060479 514
40 3300003781 Ga0055536_1003810 Ga0055536_10038102 515
41 3300005262 Ga0065165_1000145 Ga0065165_100014565 515
42 3300025292 Ga0209676_1000405 Ga0209676_100040563 515
43 3300028794 Ga0307515_10000872 Ga0307515_1000087257 515
44 3300031911 Ga0307412_10017836 Ga0307412_100178363 515
45 3300044712 Ga0453684_0011729 Ga0453684_0011729_3449_5059 515
46 3300045051 Ga0451576_0069541 Ga0451576_0069541_506_2116 515
47 3300048918 Ga0496115_0022287 Ga0496115_0022287_3214_4830 515
48 3300060353 Ga0501082_0023422 Ga0501082_0023422_267_1877 515
49 iso_pu_bacteria 2511231000 2511231059 515
50 iso_pu_bacteria 2513020052 2513233130 515
51 iso_pu_bacteria 2519899754 2520882276 515
52 iso_pu_bacteria 2582581278 2585143635 515
53 iso_pu_bacteria 2582581281 2585156523 515
54 iso_pu_bacteria 2582581282 2585160826 515
55 iso_pu_bacteria 2582581873 2585425953 515
56 iso_pu_bacteria 2585428045 2587680023 515
57 iso_pu_bacteria 2585428060 2587748682 515
58 iso_pu_bacteria 2585428061 2587752295 515
59 iso_pu_bacteria 2585428095 2587868450 515
60 iso_pu_bacteria 2585428115 2587945355 515
61 iso_pu_bacteria 2585428182 2588211540 515
62 iso_pu_bacteria 2585428183 2588215922 515
63 iso_pu_bacteria 2585428184 2588219345 515
64 iso_pu_bacteria 2585428185 2588224826 515
65 iso_pu_bacteria 2585428187 2588234656 515
66 iso_pu_bacteria 2588253712 2588447616 515
67 iso_pu_bacteria 2588254255 2590603242 515
68 iso_pu_bacteria 2588254257 2590610258 515
69 iso_pu_bacteria 2643221600 2644010240 515
70 iso_pu_bacteria 2643221667 2644373593 515
71 iso_pu_bacteria 2643221716 2644640225 515
72 iso_pu_bacteria 2643221725 2644683342 515
73 iso_pu_bacteria 2728369107 2729200712 515
74 iso_pu_bacteria 2738541273 2738698346 515
75 iso_pu_bacteria 2738541279 2738736686 515
76 iso_pu_bacteria 2738541285 2738769142 515
77 iso_pu_bacteria 2738543007 2739218268 515
78 iso_pu_bacteria 2738543014 2739252672 515
79 iso_pu_bacteria 2739367857 2740002142 515
80 iso_pu_bacteria 2739367858 2740006958 515
81 iso_pu_bacteria 2751185877 2753674245 515
82 iso_pu_bacteria 2765235839 2765575731 515
83 iso_pu_bacteria 2772190705 2772605832 515
84 iso_pu_bacteria 2775506739 2775674291 515
85 iso_pu_bacteria 2802428842 2802652776 515
86 iso_pu_bacteria 2816332188 2816875575 515
87 iso_pu_bacteria 2816332280 2817417030 515
88 iso_pu_bacteria 2833640130 2833643763 515
89 iso_pu_bacteria 2842083920 2842086302 515
90 iso_pu_bacteria 2857613821 2857616215 515
91 iso_pu_bacteria 2857618242 2857622617 515
92 iso_pu_bacteria 2871720351 2871723652 515
93 iso_pu_bacteria 2881247448 2881248171 515
94 iso_pu_bacteria 2881359912 2881360391 515
95 iso_pu_bacteria 2889290771 2889293771 515
96 iso_pu_bacteria 2903895155 2903896498 515
97 iso_pu_bacteria 2904419702 2904423498 515
98 iso_pu_bacteria 2904555929 2904560361 515
99 iso_pu_bacteria 2905999023 2906001135 515
100 iso_pu_bacteria 2919097161 2919097905 515
101 iso_pu_bacteria 2919191525 2919191640 515
102 iso_pu_bacteria 2919399522 2919403147 515
103 iso_pu_bacteria 2919509842 2919512589 515
104 iso_pu_bacteria 2919683626 2919688140 515
105 iso_pu_bacteria 2929150217 2929154308 515
106 iso_pu_bacteria 2945924605 2945924758 515
107 iso_pu_bacteria 2946019816 2946024129 515
108 iso_pu_bacteria 2958458903 2958459462 515
109 iso_pu_bacteria 2958512119 2958513283 515
110 iso_pu_bacteria 2965320100 2965320703 515
111 iso_pu_bacteria 2977243572 2977247711 515
112 iso_pu_bacteria 2977268062 2977271125 515
113 iso_pu_bacteria 2984572630 2984574488 515
114 iso_pu_bacteria 2984606641 2984607938 515
115 iso_pu_bacteria 2993372514 2993375053 515
116 iso_pu_bacteria 2993480792 2993481916 515
117 iso_pu_bacteria 8036736890 8036738120 515
118 iso_pu_bacteria 8054307821 8054308448 515
119 iso_pu_bacteria 8055419101 8055422626 515
120 iso_pu_bacteria 8055592153 8055595528 515
121 iso_pu_bacteria 8056440228 8056443691 515
122 2162886007 SwRhRL2b_contig_1496964 SwRhRL2b_0604.00001090 516
123 3300003323 rootH1_10003890 rootH1_1000389016 516
124 3300005289 Ga0065704_10070178 Ga0065704_1007017850 516
125 3300005340 Ga0070689_100000011 Ga0070689_10000001162 516
126 3300005340 Ga0070689_100034286 Ga0070689_1000342863 516
127 3300005364 Ga0070673_100050415 Ga0070673_1000504153 516
128 3300005364 Ga0070673_100122889 Ga0070673_1001228892 516
129 3300005365 Ga0070688_100012799 Ga0070688_1000127993 516
130 3300005539 Ga0068853_100001840 Ga0068853_10000184011 516
131 3300005548 Ga0070665_100009483 Ga0070665_10000948312 516
132 3300005548 Ga0070665_100074577 Ga0070665_1000745772 516
133 3300005578 Ga0068854_100038819 Ga0068854_1000388191 516
134 3300005617 Ga0068859_100043366 Ga0068859_1000433664 516
135 3300006931 Ga0097620_100043365 Ga0097620_1000433654 516
136 3300009093 Ga0105240_10000101 Ga0105240_1000010155 516
137 3300009093 Ga0105240_10293782 Ga0105240_102937821 516
138 3300009545 Ga0105237_10002943 Ga0105237_1000294318 516
139 3300009545 Ga0105237_10115539 Ga0105237_101155392 516
140 3300009551 Ga0105238_10005093 Ga0105238_100050938 516
141 3300010375 Ga0105239_10000277 Ga0105239_1000027757 516
142 3300010375 Ga0105239_10027489 Ga0105239_100274894 516
143 3300014326 Ga0157380_10000033 Ga0157380_1000003322 516
144 3300025904 Ga0207647_10007137 Ga0207647_1000713710 516
145 3300025913 Ga0207695_10000020 Ga0207695_10000020644 516
146 3300025913 Ga0207695_10012575 Ga0207695_100125756 516
147 3300025914 Ga0207671_10000443 Ga0207671_1000044321 516
148 3300025914 Ga0207671_10118662 Ga0207671_101186621 516
149 3300025925 Ga0207650_10093181 Ga0207650_100931812 516
150 3300025936 Ga0207670_10000005 Ga0207670_10000005317 516
151 3300025936 Ga0207670_10092196 Ga0207670_100921961 516
152 3300025940 Ga0207691_10121437 Ga0207691_101214372 516
153 3300025981 Ga0207640_10013418 Ga0207640_100134183 516
154 3300026088 Ga0207641_10173577 Ga0207641_101735771 516
155 3300028379 Ga0268266_10057662 Ga0268266_100576623 516
156 3300028800 Ga0265338_10039530 Ga0265338_100395303 516
157 3300031251 Ga0265327_10000009 Ga0265327_1000000932 516
158 3300031251 Ga0265327_10000485 Ga0265327_1000048535 516
159 3300032005 Ga0307411_10020282 Ga0307411_100202822 516
160 3300034818 Ga0373950_0000032 Ga0373950_0000032_33016_34629 516
161 3300037471 Ga0395905_0000001 Ga0395905_0000001_1657937_1659571 516
162 3300042876 Ga0451577_0000180 Ga0451577_0000180_56857_58470 516
163 3300044673 Ga0453683_0000180 Ga0453683_0000180_9794_11407 516
164 3300044673 Ga0453683_0046158 Ga0453683_0046158_939_2615 516
165 3300044712 Ga0453684_0000587 Ga0453684_0000587_56857_58470 516
166 3300044712 Ga0453684_0000598 Ga0453684_0000598_65692_67308 516
167 3300044712 Ga0453684_0243828 Ga0453684_0243828_41_1657 516
168 3300045051 Ga0451576_0000235 Ga0451576_0000235_76740_78353 516
169 3300045051 Ga0451576_0009250 Ga0451576_0009250_6880_8493 516
170 3300045051 Ga0451576_0028450 Ga0451576_0028450_3940_5556 516
171 3300046616 Ga0495668_0000074 Ga0495668_0000074_19643_21274 516
172 3300047318 Ga0495636_0000020 Ga0495636_0000020_50564_52195 516
173 3300047472 Ga0495686_0000492 Ga0495686_0000492_46138_47769 516
174 3300048903 Ga0496100_0057746 Ga0496100_0057746_612_2225 516
175 3300048917 Ga0496114_0000239 Ga0496114_0000239_32764_34377 516
176 3300048918 Ga0496115_0044580 Ga0496115_0044580_588_2201 516
177 3300049571 Ga0501034_0000009 Ga0501034_0000009_133064_134677 516
178 3300049572 Ga0501036_0038506 Ga0501036_0038506_362_1975 516
179 3300049572 Ga0501036_0086886 Ga0501036_0086886_678_2291 516
180 3300049579 Ga0501043_0003417 Ga0501043_0003417_10723_12336 516
181 3300049580 Ga0501046_0000069 Ga0501046_0000069_106031_107644 516
182 3300049581 Ga0501047_0000006 Ga0501047_0000006_191845_193458 516
183 3300049582 Ga0501048_0000382 Ga0501048_0000382_7141_8754 516
184 3300049584 Ga0501068_0008022 Ga0501068_0008022_1502_3115 516
185 3300049585 Ga0501069_0003913 Ga0501069_0003913_1126_2739 516
186 3300049588 Ga0501072_0000121 Ga0501072_0000121_40953_42566 516
187 3300049589 Ga0501073_0005742 Ga0501073_0005742_6402_8015 516
188 3300049590 Ga0501074_0000564 Ga0501074_0000564_9162_10775 516
189 3300049741 Ga0501079_0006192 Ga0501079_0006192_6231_7844 516
190 3300049742 Ga0501080_0000929 Ga0501080_0000929_1135_2748 516
191 3300049744 Ga0501083_0000387 Ga0501083_0000387_5171_6784 516
192 3300053153 Ga0500616_0000572 Ga0500616_0000572_39954_41585 516
193 3300053158 Ga0500627_0005096 Ga0500627_0005096_880_2511 516
194 3300054114 Ga0501084_0000011 Ga0501084_0000011_45049_46662 516
195 3300060353 Ga0501082_0000650 Ga0501082_0000650_7882_9495 516
196 3300003316 rootH1_10011647 rootH1_1001164714 517
197 3300003323 rootH1_10021665 rootH1_100216653 517
198 3300003323 rootH1_10026860 rootH1_100268603 517
199 3300005614 Ga0068856_100015303 Ga0068856_1000153037 517
200 3300028794 Ga0307515_10031753 Ga0307515_100317532 517
201 3300031251 Ga0265327_10011556 Ga0265327_100115562 517
202 3300031548 Ga0307408_100000271 Ga0307408_10000027114 517
203 3300031731 Ga0307405_10016323 Ga0307405_100163232 517
204 3300032004 Ga0307414_10000853 Ga0307414_100008533 517
205 3300049571 Ga0501034_0006708 Ga0501034_0006708_4753_6375 517
206 3300003322 rootL2_10000031 rootL2_1000003114 518
207 3300003323 rootH1_10102661 rootH1_101026613 518
208 3300003794 Ga0055531_10000212 Ga0055531_100002123 518
209 3300005262 Ga0065165_1002590 Ga0065165_10025905 518
210 3300006844 Ga0075428_100040820 Ga0075428_1000408204 518
211 3300009094 Ga0111539_10051813 Ga0111539_100518132 518
212 3300014326 Ga0157380_10021502 Ga0157380_100215023 518
213 3300014326 Ga0157380_10032642 Ga0157380_100326423 518
214 3300025304 Ga0209257_1000007 Ga0209257_100000757 518
215 3300031507 Ga0307509_10129368 Ga0307509_101293682 518
216 3300032002 Ga0307416_100141685 Ga0307416_1001416851 518
217 3300041486 Ga0451807_0482287 Ga0451807_0482287_514_2133 518
218 3300042876 Ga0451577_0079155 Ga0451577_0079155_1222_2841 518
219 3300044712 Ga0453684_0002883 Ga0453684_0002883_1135_2754 518
220 3300045051 Ga0451576_0001369 Ga0451576_0001369_32235_33854 518
221 3300045051 Ga0451576_0069249 Ga0451576_0069249_1243_2862 518
222 3300046460 Ga0495638_0000036 Ga0495638_0000036_36025_37644 518
223 3300049686 Ga0501257_005526 Ga0501257_005526_310_1929 518
224 3300049761 Ga0501264_000201 Ga0501264_000201_261_1880 518
225 3300050511 nmdc:mga08y16_173903_c1 nmdc:mga08y16_173903_c1_207_2009 518
226 3300050511 nmdc:mga08y16_83214_c1 nmdc:mga08y16_83214_c1_1231_2850 518
227 3300053105 Ga0500557_003370 Ga0500557_003370_425_2044 518
228 3300053153 Ga0500616_0000004 Ga0500616_0000004_579817_581436 518
229 2162886007 SwRhRL2b_contig_1423761 SwRhRL2b_0498.00010100 519
230 3300005289 Ga0065704_10071690 Ga0065704_100716902 519
231 3300005289 Ga0065704_10071718 Ga0065704_100717182 519
232 3300005337 Ga0070682_100000199 Ga0070682_10000019925 519
233 3300005535 Ga0070684_100115621 Ga0070684_1001156211 519
234 3300005616 Ga0068852_100155153 Ga0068852_1001551532 519
235 3300006942 Ga0099824_1003979 Ga0099824_10039794 519
236 3300006946 Ga0079104_1000108 Ga0079104_1000108113 519
237 3300006948 Ga0099826_10000178 Ga0099826_1000017816 519
238 3300009036 Ga0105244_10000160 Ga0105244_1000016040 519
239 3300009036 Ga0105244_10000292 Ga0105244_1000029214 519
240 3300009092 Ga0105250_10007351 Ga0105250_100073512 519
241 3300009148 Ga0105243_10030245 Ga0105243_100302453 519
242 3300009553 Ga0105249_10009283 Ga0105249_100092836 519
243 3300013100 Ga0157373_10000001 Ga0157373_10000001563 519
244 3300013100 Ga0157373_10000006 Ga0157373_1000000631 519
245 3300013102 Ga0157371_10000019 Ga0157371_10000019230 519
246 3300013104 Ga0157370_10000026 Ga0157370_10000026139 519
247 3300013104 Ga0157370_10000225 Ga0157370_100002256 519
248 3300013104 Ga0157370_10001772 Ga0157370_100017723 519
249 3300013104 Ga0157370_10005786 Ga0157370_100057867 519
250 3300013104 Ga0157370_10026301 Ga0157370_100263012 519
251 3300013104 Ga0157370_10109883 Ga0157370_101098832 519
252 3300013105 Ga0157369_10000436 Ga0157369_1000043614 519
253 3300013105 Ga0157369_10009301 Ga0157369_1000930111 519
254 3300013306 Ga0163162_10007468 Ga0163162_100074684 519
255 3300013308 Ga0157375_10003751 Ga0157375_100037513 519
256 3300014497 Ga0182008_10000003 Ga0182008_10000003204 519
257 3300015261 Ga0182006_1000001 Ga0182006_1000001899 519
258 3300017792 Ga0163161_10000061 Ga0163161_1000006116 519
259 3300017792 Ga0163161_10013478 Ga0163161_100134785 519
260 3300017792 Ga0163161_10025104 Ga0163161_100251042 519
261 3300025291 Ga0209675_1000200 Ga0209675_100020040 519
262 3300025728 Ga0207655_1000012 Ga0207655_100001214 519
263 3300025728 Ga0207655_1000016 Ga0207655_1000016485 519
264 3300025735 Ga0207713_1034401 Ga0207713_10344011 519
265 3300025935 Ga0207709_10000355 Ga0207709_1000035529 519
266 3300025944 Ga0207661_10055086 Ga0207661_100550862 519
267 3300025972 Ga0207668_10047995 Ga0207668_100479953 519
268 3300027111 Ga0209281_1000208 Ga0209281_1000208104 519
269 3300027361 Ga0209489_113393 Ga0209489_1133935 519
270 3300027471 Ga0209995_1002860 Ga0209995_10028602 519
271 3300027526 Ga0209968_1001086 Ga0209968_10010862 519
272 3300031731 Ga0307405_10000021 Ga0307405_1000002111 519
273 3300031824 Ga0307413_10000121 Ga0307413_1000012117 519
274 3300031852 Ga0307410_10000383 Ga0307410_100003837 519
275 3300031901 Ga0307406_10000455 Ga0307406_100004559 519
276 3300031903 Ga0307407_10048350 Ga0307407_100483502 519
277 3300031911 Ga0307412_10000036 Ga0307412_10000036163 519
278 3300031911 Ga0307412_10000676 Ga0307412_1000067613 519
279 3300031911 Ga0307412_10001291 Ga0307412_1000129113 519
280 3300032002 Ga0307416_100000006 Ga0307416_10000000645 519
281 3300032002 Ga0307416_100001014 Ga0307416_1000010144 519
282 3300032004 Ga0307414_10000008 Ga0307414_1000000893 519
283 3300032004 Ga0307414_10000043 Ga0307414_1000004313 519
284 3300032005 Ga0307411_10000018 Ga0307411_1000001854 519
285 3300033180 Ga0307510_10056866 Ga0307510_100568661 519
286 3300041411 Ga0439466_0000213 Ga0439466_0000213_5755_7374 519
287 3300041413 Ga0439465_0000931 Ga0439465_0000931_2862_4484 519
288 3300042004 Ga0439445_0000099 Ga0439445_0000099_5375_6997 519
289 3300046453 Ga0495627_000022 Ga0495627_000022_226637_228259 519
290 3300046453 Ga0495627_005939 Ga0495627_005939_2105_3727 519
291 3300046457 Ga0495590_0001734 Ga0495590_0001734_1039_2661 519
292 3300046500 Ga0495596_0001074 Ga0495596_0001074_13477_15099 519
293 3300046501 Ga0495607_0007492 Ga0495607_0007492_588_2210 519
294 3300046507 Ga0495606_0002399 Ga0495606_0002399_5617_7239 519
295 3300046507 Ga0495606_0019181 Ga0495606_0019181_2485_4107 519
296 3300046512 Ga0495610_0000005 Ga0495610_0000005_151454_153076 519
297 3300046513 Ga0495616_0005163 Ga0495616_0005163_2809_4431 519
298 3300046519 Ga0495632_0003246 Ga0495632_0003246_6396_8018 519
299 3300046522 Ga0495643_0004254 Ga0495643_0004254_1621_3243 519
300 3300046525 Ga0495663_0000053 Ga0495663_0000053_25662_27284 519
301 3300046525 Ga0495663_0021438 Ga0495663_0021438_102_1724 519
302 3300046530 Ga0495654_0000003 Ga0495654_0000003_724583_726205 519
303 3300046530 Ga0495654_0063809 Ga0495654_0063809_66_1685 519
304 3300046538 Ga0495609_0000311 Ga0495609_0000311_39296_40918 519
305 3300046558 Ga0495633_0000350 Ga0495633_0000350_22502_24124 519
306 3300046660 Ga0495625_0000096 Ga0495625_0000096_117297_118919 519
307 3300047472 Ga0495686_0000133 Ga0495686_0000133_35886_37508 519
308 3300048905 Ga0496102_0022707 Ga0496102_0022707_23_1645 519
309 3300048919 Ga0496116_0000004 Ga0496116_0000004_620192_621811 519
310 3300048919 Ga0496116_0000029 Ga0496116_0000029_31914_33536 519
311 3300048920 Ga0496117_0000007 Ga0496117_0000007_30313_31935 519
312 3300048921 Ga0496118_0002335 Ga0496118_0002335_982_2604 519
313 3300048921 Ga0496118_0052552 Ga0496118_0052552_114_1733 519
314 3300048922 Ga0496119_0000007 Ga0496119_0000007_30380_32002 519
315 3300048925 Ga0496122_0000946 Ga0496122_0000946_42308_43999 519
316 3300048925 Ga0496122_0001529 Ga0496122_0001529_18_1640 519
317 3300048925 Ga0496122_0003233 Ga0496122_0003233_144_1766 519
318 3300048925 Ga0496122_0003623 Ga0496122_0003623_17826_19448 519
319 3300048926 Ga0496123_0009812 Ga0496123_0009812_4077_5699 519
320 3300048926 Ga0496123_0021024 Ga0496123_0021024_2820_4442 519
321 3300048927 Ga0496124_0001116 Ga0496124_0001116_10051_11673 519
322 3300048928 Ga0496125_0000082 Ga0496125_0000082_9843_11462 519
323 3300048928 Ga0496125_0000382 Ga0496125_0000382_50824_52446 519
324 3300048928 Ga0496125_0002205 Ga0496125_0002205_23612_25234 519
325 3300048928 Ga0496125_0013699 Ga0496125_0013699_5999_7621 519
326 3300048929 Ga0496126_0008656 Ga0496126_0008656_2311_3933 519
327 3300048929 Ga0496126_0014674 Ga0496126_0014674_4185_5807 519
328 3300049579 Ga0501043_0100897 Ga0501043_0100897_366_1982 519
329 3300049581 Ga0501047_0058714 Ga0501047_0058714_794_2410 519
330 3300049671 Ga0501238_000069 Ga0501238_000069_874_2493 519
331 3300049679 Ga0501249_000006 Ga0501249_000006_214180_215799 519
332 3300049758 Ga0501241_000002 Ga0501241_000002_119597_121219 519
333 3300049763 Ga0501266_000017 Ga0501266_000017_126444_128063 519
334 3300049766 Ga0501269_000004 Ga0501269_000004_70651_72273 519
335 3300049766 Ga0501269_001022 Ga0501269_001022_502_2121 519
336 3300049776 Ga0501280_002423 Ga0501280_002423_651_2270 519
337 3300049822 Ga0501035_0003967 Ga0501035_0003967_10274_11890 519
338 3300053096 Ga0500641_0000009 Ga0500641_0000009_97629_99248 519
339 3300053096 Ga0500641_0000084 Ga0500641_0000084_14192_15814 519
340 3300053096 Ga0500641_0002806 Ga0500641_0002806_3024_4643 519
341 3300053118 Ga0500594_0001768 Ga0500594_0001768_219_1838 519
342 3300053134 Ga0500658_0000035 Ga0500658_0000035_73037_74656 519
343 3300053136 Ga0500559_0039911 Ga0500559_0039911_174_1793 519
344 3300053726 Ga0500584_003091 Ga0500584_003091_837_2456 519
345 iso_pu_bacteria 2523533629 2524006170 519

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

78

245

0.93

PF00005

ABC_tran

ABC transporter

381

514

0.86

PF12848

ABC_tran_Xtn

ABC transporter

305

354

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zxd-assembly1.cif.gz_A crystal structure of atp-bound human abcf1 0.8271 3 513
7vx8-assembly1.cif.gz_A cryo-em structure of atp-bound human very long-chain fatty acid abc transporter abcd1 0.8181 293 499
1l7v-assembly1.cif.gz_D bacterial abc transporter involved in b12 uptake 0.8151 297 512
8cea-assembly1.cif.gz_a cytochrome c maturation complex ccmabcd, e154q 0.8145 298 490
6xjh-assembly1.cif.gz_D pmtcd abc exporter without the basket domain at c2 symmetry 0.8114 3 234
ID Description Score Start End Superfamily
af_Q2FYP2_1_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9237 1 274 3.40.50.300
af_Q2FYP2_281_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9076 260 507 3.40.50.300
af_Q2FYP2_281_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9005 260 507 3.40.50.300
af_P0A9U3_282_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8995 261 509 3.40.50.300
af_Q2FYP2_1_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8946 1 274 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3B8HDA8-F1-model_v4 deleted 0.9771 339 517
AF-A0A2B7YWF7-F1-model_v4 ABC transporter ATP-binding protein 0.9734 408 519
AF-W1YAE6-F1-model_v4 ABC transporter family protein 0.9674 113 234 GO:0005524
GO:0016887
AF-W1YAE6-F1-model_v4 ABC transporter family protein 0.9522 113 234 GO:0005524
GO:0016887
AF-A0A2B7YWF7-F1-model_v4 ABC transporter ATP-binding protein 0.9486 408 519

Feature Viewer

pLDDT pTM Quality
88.46 0.82 High
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Predicted Structure (AlphaFold2)

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