F416351

General Info

Members Datasets Scaffolds Average Seq Length
345 182 690 569

Family's Representative Sequence

Representative Sequence 3300009101|Ga0105247_10064626|Ga0105247_100646262
Length 611
Sequence MAMMKVIIPAKAQRRKAAKAREGAKGYLIFFAPLRLCGKKAKLSVMPEKPKLDRFGVATALQEIAQLMDLKGGQFRFKAKAYNAGARAIQGVADLDRLVKEDRLTTLPRIGDALASQIKQLYLTGESSVLNGLRQEFPKGVIELSTVPGLSVEKIKQLDEAGISSIAQLKAAAETGRLQSLKGFGPKTEQRLLAQLANPVKKTKRRLHLHQAWNTADQVVDYLRSIAGVVDVSVAGSLRRWEETIGVIDIVASAKDAEAVIERFQEFPLILSSQVDEPGTCVAHFADGAQVWLTVVAPEEFGITLFVKTGSQAHIEKIKDYAERKKVNFARLPRTEAQLYKRLGMAYIEPELREDQGELEAAVAKKIPEDLVTAADIRGMVHCHTTYSDGIHTLEAMVRGAEEMGMKYITITDHSPTAIYANGLKLDRLQRQWDEIDEVQEKVSIKILRGTESDIIATGKLDYPDDVLEKFDVIVASIHARYKMDSAKMTERITTAMREPVFKIWGHGLGRLLQRRPPIECDVERILDVIAESRAAIEINGDPYRLDLEPRWLREARKRKIKFVVSTDAHSVKAMNNVKYGVAMARRGWITRKEVLNTLPAAAFSKAVKPA

Samples

Sample ID Description Type Environment
1 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
58 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
62 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
71 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
72 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
75 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
123 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
126 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
127 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
128 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
129 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
130 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
131 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
132 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
136 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
139 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
140 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
160 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
161 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
162 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
163 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
164 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
165 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
166 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.45
Rhizosphere 98.55
Stem 0
Stem Tuber 0
Unclassified 11.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105247_10064626 3300009101 Unclassified 2274
2 JGI24748J21848_1000002 3300002074 Bacteria 426946
3 JGI24034J26672_10000004 3300002239 Bacteria 426946
4 JGI24742J22300_10003135 3300002244 Bacteria 2674
5 JGI24751J29686_10000019 3300002459 Bacteria 107056
6 JGI25406J46586_10001874 3300003203 Bacteria 9883
7 Ga0065714_10002203 3300005288 Bacteria 58048
8 Ga0065712_10000140 3300005290 Bacteria 58055
9 Ga0065715_10089363 3300005293 Bacteria 10869
10 Ga0065715_10089561 3300005293 Bacteria 9479
11 Ga0065707_10006340 3300005295 Bacteria 2779
12 Ga0065707_10087326 3300005295 Bacteria 5074
13 Ga0065707_10096133 3300005295 Unclassified 3301
14 Ga0070670_100000291 3300005331 Bacteria 44111
15 Ga0070670_100069326 3300005331 Bacteria 3027
16 Ga0068869_100013434 3300005334 Archaea 5447
17 Ga0070666_10030304 3300005335 Archaea 3563
18 Ga0070680_100000421 3300005336 Bacteria 28897
19 Ga0070680_100024501 3300005336 Bacteria 4822
20 Ga0070682_100000243 3300005337 Bacteria 39336
21 Ga0070682_100009141 3300005337 Bacteria 5601
22 Ga0068868_100003497 3300005338 Bacteria 10935
23 Ga0070689_100000197 3300005340 Bacteria 36085
24 Ga0070692_10014451 3300005345 Bacteria 3710
25 Ga0070671_100029281 3300005355 Unclassified 4540
26 Ga0070674_100068447 3300005356 Unclassified 2501
27 Ga0070673_100006106 3300005364 Bacteria 7805
28 Ga0070659_100008399 3300005366 Bacteria 7543
29 Ga0070667_100090974 3300005367 Bacteria 2623
30 Ga0070703_10000044 3300005406 Bacteria 61258
31 Ga0070703_10002630 3300005406 Bacteria 5165
32 Ga0070701_10063881 3300005438 Unclassified 1949
33 Ga0070705_100004926 3300005440 Bacteria 6503
34 Ga0070705_100023282 3300005440 Unclassified 3324
35 Ga0070700_100001084 3300005441 Bacteria 13520
36 Ga0070694_100001831 3300005444 Bacteria 12582
37 Ga0070694_100051752 3300005444 Bacteria 2774
38 Ga0070694_100058378 3300005444 Unclassified 2625
39 Ga0070708_100066417 3300005445 Bacteria 3238
40 Ga0070681_10000053 3300005458 Bacteria 81387
41 Ga0070681_10028989 3300005458 Bacteria 5559
42 Ga0070681_10069108 3300005458 Bacteria 3499
43 Ga0070681_10089031 3300005458 Bacteria 3038
44 Ga0070685_10019515 3300005466 Archaea 3658
45 Ga0070706_100001104 3300005467 Bacteria 29217
46 Ga0070706_100005533 3300005467 Bacteria 12028
47 Ga0070706_100005589 3300005467 Bacteria 11958
48 Ga0070706_100053116 3300005467 Archaea 3740
49 Ga0070707_100000026 3300005468 Bacteria 124537
50 Ga0070707_100042374 3300005468 Bacteria 4359
51 Ga0070707_100046175 3300005468 Bacteria 4168
52 Ga0070698_100006605 3300005471 Bacteria 12578
53 Ga0070698_100007972 3300005471 Bacteria 11454
54 Ga0070698_100007988 3300005471 Bacteria 11441
55 Ga0070698_100008111 3300005471 Bacteria 11352
56 Ga0070698_100010031 3300005471 Bacteria 10117
57 Ga0070698_100013982 3300005471 Bacteria 8489
58 Ga0070699_100001463 3300005518 Bacteria 21633
59 Ga0070699_100006344 3300005518 Bacteria 10311
60 Ga0070699_100041225 3300005518 Bacteria 3997
61 Ga0070699_100051757 3300005518 Bacteria 3556
62 Ga0070699_100086218 3300005518 Bacteria 2740
63 Ga0070699_100094401 3300005518 Bacteria 2618
64 Ga0070679_100000030 3300005530 Bacteria 108148
65 Ga0070679_100054482 3300005530 Unclassified 3982
66 Ga0070697_100000598 3300005536 Bacteria 27378
67 Ga0070697_100020574 3300005536 Bacteria 5222
68 Ga0070697_100041249 3300005536 Bacteria 3734
69 Ga0070697_100045170 3300005536 Bacteria 3570
70 Ga0070697_100143745 3300005536 Unclassified 2007
71 Ga0070695_100015298 3300005545 Unclassified 4631
72 Ga0070695_100077706 3300005545 Bacteria 2188
73 Ga0070696_100029927 3300005546 Bacteria 3724
74 Ga0070665_100034443 3300005548 Bacteria 5092
75 Ga0070704_100016635 3300005549 Bacteria 4652
76 Ga0070704_100034340 3300005549 Bacteria 3439
77 Ga0070664_100022210 3300005564 Bacteria 5233
78 Ga0068857_100061283 3300005577 Bacteria 3342
79 Ga0068856_100020906 3300005614 Bacteria 6361
80 Ga0070702_100016416 3300005615 Bacteria 3798
81 Ga0070702_100023872 3300005615 Bacteria 3255
82 Ga0068859_100005867 3300005617 Bacteria 12466
83 Ga0068859_100020330 3300005617 Bacteria 6665
84 Ga0068859_100059251 3300005617 Bacteria 3857
85 Ga0068859_100070722 3300005617 Unclassified 3525
86 Ga0068859_100072058 3300005617 Bacteria 3491
87 Ga0068859_100075779 3300005617 Bacteria 3405
88 Ga0068864_100023002 3300005618 Bacteria 5230
89 Ga0068864_100026318 3300005618 Bacteria 4906
90 Ga0068864_100032508 3300005618 Bacteria 4433
91 Ga0068864_100152739 3300005618 Bacteria 2093
92 Ga0068866_10014987 3300005718 Bacteria 3436
93 Ga0068866_10070963 3300005718 Unclassified 1840
94 Ga0068861_100076102 3300005719 Unclassified 2614
95 Ga0068851_10009893 3300005834 Bacteria 4441
96 Ga0068863_100095746 3300005841 Unclassified 2818
97 Ga0068858_100000067 3300005842 Bacteria 106455
98 Ga0068858_100050502 3300005842 Bacteria 3849
99 Ga0068858_100097446 3300005842 Bacteria 2741
100 Ga0068860_100012142 3300005843 Bacteria 8487
101 Ga0068862_100015752 3300005844 Bacteria 6283
102 Ga0068862_100020585 3300005844 Bacteria 5511
103 Ga0081540_1033477 3300005983 Bacteria 2790
104 Ga0081539_10000481 3300005985 Bacteria 84382
105 Ga0081539_10000631 3300005985 Bacteria 71279
106 Ga0070715_10000006 3300006163 Bacteria 216296
107 Ga0070716_100048169 3300006173 Unclassified 2408
108 Ga0097621_100025182 3300006237 Bacteria 4653
109 Ga0097621_100174943 3300006237 Unclassified 1852
110 Ga0068871_100002589 3300006358 Bacteria 12341
111 Ga0075433_10002300 3300006852 Bacteria 14556
112 Ga0075433_10065543 3300006852 Bacteria 3186
113 Ga0075433_10066563 3300006852 Bacteria 3161
114 Ga0075434_100003738 3300006871 Bacteria 13600
115 Ga0075434_100014982 3300006871 Bacteria 7422
116 Ga0075434_100044141 3300006871 Bacteria 4422
117 Ga0075434_100058624 3300006871 Bacteria 3826
118 Ga0075434_100191550 3300006871 Unclassified 2065
119 Ga0075429_100016797 3300006880 Bacteria 6335
120 Ga0068865_100005348 3300006881 Archaea 7775
121 Ga0097620_100005867 3300006931 Bacteria 12466
122 Ga0097620_100020331 3300006931 Bacteria 6665
123 Ga0097620_100059248 3300006931 Bacteria 3857
124 Ga0097620_100070721 3300006931 Unclassified 3525
125 Ga0097620_100072059 3300006931 Bacteria 3491
126 Ga0097620_100075777 3300006931 Bacteria 3405
127 Ga0075435_100002448 3300007076 Bacteria 12330
128 Ga0075435_100005882 3300007076 Bacteria 8631
129 Ga0075435_100007708 3300007076 Bacteria 7697
130 Ga0111539_10002484 3300009094 Bacteria 24463
131 Ga0111539_10004246 3300009094 Bacteria 18767
132 Ga0111539_10040787 3300009094 Bacteria 5586
133 Ga0111539_10055431 3300009094 Bacteria 4712
134 Ga0111539_10223694 3300009094 Unclassified 2192
135 Ga0105247_10000005 3300009101 Bacteria 426989
136 Ga0105247_10020566 3300009101 Bacteria 3968
137 Ga0114129_10025862 3300009147 Bacteria 8313
138 Ga0114129_10037231 3300009147 Bacteria 6869
139 Ga0114129_10043575 3300009147 Bacteria 6313
140 Ga0114129_10066642 3300009147 Bacteria 5022
141 Ga0114129_10099418 3300009147 Bacteria 4026
142 Ga0114129_10150660 3300009147 Bacteria 3183
143 Ga0114129_10152938 3300009147 Bacteria 3157
144 Ga0114129_10178578 3300009147 Unclassified 2890
145 Ga0114129_10180026 3300009147 Bacteria 2877
146 Ga0114129_10187291 3300009147 Bacteria 2812
147 Ga0114129_10301466 3300009147 Bacteria 2135
148 Ga0105243_10000112 3300009148 Bacteria 93493
149 Ga0105243_10000318 3300009148 Bacteria 53066
150 Ga0105243_10008476 3300009148 Bacteria 7890
151 Ga0105243_10180257 3300009148 Unclassified 1836
152 Ga0105241_10004663 3300009174 Bacteria 10131
153 Ga0105242_10000067 3300009176 Bacteria 73482
154 Ga0105242_10133363 3300009176 Bacteria 2147
155 Ga0105248_10016465 3300009177 Bacteria 8138
156 Ga0105248_10019192 3300009177 Bacteria 7564
157 Ga0105248_10100420 3300009177 Bacteria 3261
158 Ga0105248_10193281 3300009177 Unclassified 2293
159 Ga0105237_10016252 3300009545 Bacteria 7735
160 Ga0105237_10019610 3300009545 Bacteria 6984
161 Ga0105237_10173416 3300009545 Bacteria 2157
162 Ga0105249_10000018 3300009553 Bacteria 275907
163 Ga0105249_10091045 3300009553 Bacteria 2853
164 Ga0105249_10165483 3300009553 Bacteria 2140
165 Ga0157373_10018911 3300013100 Bacteria 5014
166 Ga0157373_10117027 3300013100 Bacteria 1873
167 Ga0157374_10048347 3300013296 Bacteria 3946
168 Ga0157378_10000679 3300013297 Bacteria 31993
169 Ga0157378_10004360 3300013297 Bacteria 12453
170 Ga0157378_10051034 3300013297 Bacteria 3680
171 Ga0157378_10112270 3300013297 Unclassified 2500
172 Ga0163162_10000001 3300013306 Bacteria 751833
173 Ga0163162_10008423 3300013306 Bacteria 10055
174 Ga0163162_10057731 3300013306 Bacteria 3909
175 Ga0163162_10168873 3300013306 Unclassified 2312
176 Ga0157372_10007062 3300013307 Bacteria 11965
177 Ga0157372_10039339 3300013307 Bacteria 5219
178 Ga0157375_10002828 3300013308 Bacteria 15023
179 Ga0157375_10005734 3300013308 Bacteria 10805
180 Ga0157375_10012297 3300013308 Bacteria 7589
181 Ga0157375_10049872 3300013308 Unclassified 4104
182 Ga0163163_10010282 3300014325 Bacteria 8408
183 Ga0163163_10029055 3300014325 Bacteria 5315
184 Ga0157380_10026125 3300014326 Unclassified 4433
185 Ga0157380_10044785 3300014326 Bacteria 3469
186 Ga0157380_10065350 3300014326 Unclassified 2924
187 Ga0157379_10022519 3300014968 Bacteria 5580
188 Ga0157379_10091152 3300014968 Bacteria 2734
189 Ga0157379_10123345 3300014968 Bacteria 2331
190 Ga0207672_1000417 3300025223 Bacteria 5410
191 Ga0207656_10003443 3300025321 Bacteria 5438
192 Ga0207653_10000366 3300025885 Bacteria 21213
193 Ga0207653_10008832 3300025885 Bacteria 3142
194 Ga0207710_10000004 3300025900 Bacteria 846540
195 Ga0207710_10000525 3300025900 Bacteria 23439
196 Ga0207688_10084093 3300025901 Unclassified 1821
197 Ga0207647_10003917 3300025904 Bacteria 11117
198 Ga0207647_10051796 3300025904 Bacteria 2535
199 Ga0207685_10000010 3300025905 Bacteria 216792
200 Ga0207643_10015330 3300025908 Bacteria 4172
201 Ga0207684_10000146 3300025910 Bacteria 125829
202 Ga0207684_10002322 3300025910 Bacteria 19307
203 Ga0207684_10007974 3300025910 Bacteria 9462
204 Ga0207684_10011672 3300025910 Bacteria 7668
205 Ga0207707_10000063 3300025912 Bacteria 108163
206 Ga0207707_10024955 3300025912 Bacteria 5230
207 Ga0207695_10163575 3300025913 Unclassified 2155
208 Ga0207671_10009546 3300025914 Bacteria 8096
209 Ga0207660_10000454 3300025917 Bacteria 26985
210 Ga0207660_10036622 3300025917 Bacteria 3412
211 Ga0207662_10051601 3300025918 Unclassified 2447
212 Ga0207652_10000091 3300025921 Bacteria 98787
213 Ga0207646_10000308 3300025922 Bacteria 66466
214 Ga0207646_10012584 3300025922 Bacteria 8122
215 Ga0207646_10014105 3300025922 Bacteria 7599
216 Ga0207646_10025250 3300025922 Bacteria 5437
217 Ga0207646_10127263 3300025922 Unclassified 2291
218 Ga0207650_10000007 3300025925 Bacteria 530810
219 Ga0207650_10046002 3300025925 Bacteria 3212
220 Ga0207644_10009860 3300025931 Bacteria 6282
221 Ga0207690_10066019 3300025932 Bacteria 2476
222 Ga0207686_10000006 3300025934 Bacteria 259583
223 Ga0207686_10000604 3300025934 Bacteria 22462
224 Ga0207686_10070823 3300025934 Bacteria 2242
225 Ga0207709_10000037 3300025935 Bacteria 279771
226 Ga0207709_10001210 3300025935 Bacteria 18549
227 Ga0207709_10002865 3300025935 Bacteria 10564
228 Ga0207670_10016284 3300025936 Bacteria 4464
229 Ga0207704_10066682 3300025938 Bacteria 2260
230 Ga0207691_10002907 3300025940 Archaea 16706
231 Ga0207711_10013436 3300025941 Bacteria 6802
232 Ga0207711_10164551 3300025941 Unclassified 2010
233 Ga0207689_10002120 3300025942 Bacteria 18654
234 Ga0207689_10003711 3300025942 Bacteria 13917
235 Ga0207689_10013839 3300025942 Bacteria 6874
236 Ga0207689_10027635 3300025942 Bacteria 4747
237 Ga0207689_10050816 3300025942 Bacteria 3417
238 Ga0207689_10065049 3300025942 Bacteria 3000
239 Ga0207679_10020722 3300025945 Bacteria 4442
240 Ga0207712_10000022 3300025961 Bacteria 284365
241 Ga0207712_10018817 3300025961 Bacteria 4503
242 Ga0207712_10081119 3300025961 Bacteria 2361
243 Ga0207640_10037851 3300025981 Bacteria 3039
244 Ga0207677_10001924 3300026023 Bacteria 10980
245 Ga0207703_10008499 3300026035 Bacteria 8111
246 Ga0207703_10014766 3300026035 Bacteria 6096
247 Ga0207703_10075336 3300026035 Bacteria 2796
248 Ga0207703_10138201 3300026035 Bacteria 2112
249 Ga0207708_10001408 3300026075 Bacteria 18038
250 Ga0207708_10018628 3300026075 Bacteria 5228
251 Ga0207708_10024141 3300026075 Bacteria 4598
252 Ga0207708_10037020 3300026075 Bacteria 3716
253 Ga0207648_10102474 3300026089 Unclassified 2509
254 Ga0207676_10003647 3300026095 Bacteria 10891
255 Ga0207676_10021758 3300026095 Bacteria 4707
256 Ga0207674_10000497 3300026116 Bacteria 51891
257 Ga0207674_10068873 3300026116 Bacteria 3560
258 Ga0207674_10072748 3300026116 Unclassified 3453
259 Ga0207675_100000187 3300026118 Bacteria 56148
260 Ga0207675_100016097 3300026118 Archaea 6985
261 Ga0207675_100098496 3300026118 Bacteria 2753
262 Ga0207675_100146418 3300026118 Unclassified 2246
263 Ga0207683_10076080 3300026121 Bacteria 2972
264 Ga0207698_10011371 3300026142 Bacteria 5769
265 Ga0207428_10002035 3300027907 Bacteria 20427
266 Ga0268266_10023473 3300028379 Bacteria 5254
267 Ga0268264_10019203 3300028381 Bacteria 5586
268 Ga0268264_10074981 3300028381 Bacteria 2875
269 Ga0268264_10158256 3300028381 Bacteria 2038
270 Ga0265339_10012533 3300031249 Bacteria 5174
271 Ga0265316_10002032 3300031344 Bacteria 21301
272 Ga0265314_10000001 3300031711 Bacteria 3792860
273 Ga0307406_10001500 3300031901 Bacteria 12885
274 Ga0307412_10008633 3300031911 Bacteria 5825
275 Ga0307415_100006370 3300032126 Bacteria 6356
276 Ga0373951_0003030 3300035091 Bacteria 4164
277 Ga0373942_0005114 3300035207 Bacteria 3040
278 Ga0395900_0155925 3300037418 Unclassified 2332
279 Ga0395901_0192814 3300038443 Bacteria 2137
280 Ga0242420_003418 3300038996 Bacteria 2344
281 Ga0451807_0271026 3300041486 Bacteria 10755
282 Ga0451576_0171657 3300045051 Bacteria 2263
283 Ga0495663_0000266 3300046525 Bacteria 20063
284 Ga0495598_0000041 3300046537 Bacteria 19239
285 Ga0495621_0000196 3300046539 Bacteria 13912
286 Ga0496104_0076926 3300048907 Bacteria 3179
287 Ga0496106_0009843 3300048909 Bacteria 7061
288 Ga0496107_0111951 3300048910 Bacteria 2007
289 Ga0496108_0020453 3300048911 Bacteria 5442
290 Ga0501291_001375 3300049514 Bacteria 2808
291 Ga0501033_0041215 3300049570 Bacteria 3446
292 Ga0501036_0031081 3300049572 Bacteria 4513
293 Ga0501038_0002138 3300049574 Bacteria 18351
294 Ga0501039_0012089 3300049575 Bacteria 6582
295 Ga0501041_0003767 3300049577 Bacteria 8721
296 Ga0501042_0002255 3300049578 Bacteria 11768
297 Ga0501046_0017341 3300049580 Bacteria 6012
298 Ga0501048_0011972 3300049582 Bacteria 6468
299 Ga0501071_0013307 3300049587 Bacteria 5607
300 Ga0501071_0017664 3300049587 Bacteria 4924
301 Ga0501072_0003718 3300049588 Bacteria 11505
302 Ga0501075_0003395 3300049591 Bacteria 10650
303 Ga0501075_0046766 3300049591 Bacteria 3251
304 Ga0501076_0000866 3300049592 Bacteria 19677
305 Ga0501077_0001279 3300049593 Bacteria 15203
306 Ga0501202_004780 3300049652 Bacteria 2380
307 Ga0501217_000121 3300049661 Bacteria 10267
308 Ga0501217_001452 3300049661 Bacteria 4447
309 Ga0501223_000295 3300049663 Bacteria 12542
310 Ga0501230_001794 3300049667 Unclassified 2631
311 Ga0501233_001578 3300049668 Bacteria 3918
312 Ga0501249_004366 3300049679 Bacteria 2872
313 Ga0501257_004750 3300049686 Bacteria 2973
314 Ga0501225_0014052 3300049705 Bacteria 2238
315 Ga0501079_0016627 3300049741 Bacteria 5619
316 Ga0501079_0084011 3300049741 Unclassified 2463
317 Ga0501080_0030945 3300049742 Bacteria 4987
318 Ga0501081_0001300 3300049743 Bacteria 15216
319 Ga0501083_0013931 3300049744 Bacteria 5622
320 Ga0501045_0004652 3300049824 Bacteria 9474
321 nmdc:mga05p37_150740_c1 3300050507 Bacteria 2844
322 nmdc:mga05p37_27218_c1 3300050507 Bacteria 6960
323 nmdc:mga05p37_314964_c1 3300050507 Bacteria 1854
324 nmdc:mga05p37_363440_c1 3300050507 Bacteria 1701
325 nmdc:mga09592_20857_c1 3300050508 Bacteria 2323
326 nmdc:mga06r32_83186_c1 3300050510 Bacteria 3119
327 nmdc:mga08y16_41786_c1 3300050511 Bacteria 4802
328 nmdc:mga0n895_11555_c1 3300050512 Bacteria 7886
329 nmdc:mga0n895_209356_c1 3300050512 Bacteria 1980
330 nmdc:mga0n895_71580_c1 3300050512 Bacteria 3439
331 nmdc:mga0n895_9948_c1 3300050512 Bacteria 8368
332 nmdc:mga0rr50_1648_c1 3300050513 Bacteria 12301
333 nmdc:mga0rr50_59819_c1 3300050513 Bacteria 2863
334 nmdc:mga0rr50_78749_c1 3300050513 Bacteria 2537
335 nmdc:mga08x19_2986_c1 3300050514 Bacteria 10165
336 nmdc:mga08x19_5706_c1 3300050514 Bacteria 7356
337 nmdc:mga0a205_111871_c1 3300050515 Bacteria 2630
338 nmdc:mga0a205_140488_c1 3300050515 Bacteria 2315
339 nmdc:mga0a205_151888_c1 3300050515 Unclassified 2215
340 nmdc:mga0a205_185_c2 3300050515 Bacteria 42551
341 nmdc:mga0a205_2765_c1 3300050515 Bacteria 15493
342 nmdc:mga0a205_77493_c1 3300050515 Bacteria 3212
343 Ga0501084_0005696 3300054114 Bacteria 10234
344 Ga0501082_0006005 3300060353 Bacteria 10528
345 Ga0530510_0001606 3300061734 Bacteria 15252
346 Ga0105247_10064626
347 JGI24748J21848_1000002
348 JGI24034J26672_10000004
349 JGI24742J22300_10003135
350 JGI24751J29686_10000019
351 JGI25406J46586_10001874
352 Ga0065714_10002203
353 Ga0065712_10000140
354 Ga0065715_10089363
355 Ga0065715_10089561
356 Ga0065707_10006340
357 Ga0065707_10087326
358 Ga0065707_10096133
359 Ga0070670_100000291
360 Ga0070670_100069326
361 Ga0068869_100013434
362 Ga0070666_10030304
363 Ga0070680_100000421
364 Ga0070680_100024501
365 Ga0070682_100000243
366 Ga0070682_100009141
367 Ga0068868_100003497
368 Ga0070689_100000197
369 Ga0070692_10014451
370 Ga0070671_100029281
371 Ga0070674_100068447
372 Ga0070673_100006106
373 Ga0070659_100008399
374 Ga0070667_100090974
375 Ga0070703_10000044
376 Ga0070703_10002630
377 Ga0070701_10063881
378 Ga0070705_100004926
379 Ga0070705_100023282
380 Ga0070700_100001084
381 Ga0070694_100001831
382 Ga0070694_100051752
383 Ga0070694_100058378
384 Ga0070708_100066417
385 Ga0070681_10000053
386 Ga0070681_10028989
387 Ga0070681_10069108
388 Ga0070681_10089031
389 Ga0070685_10019515
390 Ga0070706_100001104
391 Ga0070706_100005533
392 Ga0070706_100005589
393 Ga0070706_100053116
394 Ga0070707_100000026
395 Ga0070707_100042374
396 Ga0070707_100046175
397 Ga0070698_100006605
398 Ga0070698_100007972
399 Ga0070698_100007988
400 Ga0070698_100008111
401 Ga0070698_100010031
402 Ga0070698_100013982
403 Ga0070699_100001463
404 Ga0070699_100006344
405 Ga0070699_100041225
406 Ga0070699_100051757
407 Ga0070699_100086218
408 Ga0070699_100094401
409 Ga0070679_100000030
410 Ga0070679_100054482
411 Ga0070697_100000598
412 Ga0070697_100020574
413 Ga0070697_100041249
414 Ga0070697_100045170
415 Ga0070697_100143745
416 Ga0070695_100015298
417 Ga0070695_100077706
418 Ga0070696_100029927
419 Ga0070665_100034443
420 Ga0070704_100016635
421 Ga0070704_100034340
422 Ga0070664_100022210
423 Ga0068857_100061283
424 Ga0068856_100020906
425 Ga0070702_100016416
426 Ga0070702_100023872
427 Ga0068859_100005867
428 Ga0068859_100020330
429 Ga0068859_100059251
430 Ga0068859_100070722
431 Ga0068859_100072058
432 Ga0068859_100075779
433 Ga0068864_100023002
434 Ga0068864_100026318
435 Ga0068864_100032508
436 Ga0068864_100152739
437 Ga0068866_10014987
438 Ga0068866_10070963
439 Ga0068861_100076102
440 Ga0068851_10009893
441 Ga0068863_100095746
442 Ga0068858_100000067
443 Ga0068858_100050502
444 Ga0068858_100097446
445 Ga0068860_100012142
446 Ga0068862_100015752
447 Ga0068862_100020585
448 Ga0081540_1033477
449 Ga0081539_10000481
450 Ga0081539_10000631
451 Ga0070715_10000006
452 Ga0070716_100048169
453 Ga0097621_100025182
454 Ga0097621_100174943
455 Ga0068871_100002589
456 Ga0075433_10002300
457 Ga0075433_10065543
458 Ga0075433_10066563
459 Ga0075434_100003738
460 Ga0075434_100014982
461 Ga0075434_100044141
462 Ga0075434_100058624
463 Ga0075434_100191550
464 Ga0075429_100016797
465 Ga0068865_100005348
466 Ga0097620_100005867
467 Ga0097620_100020331
468 Ga0097620_100059248
469 Ga0097620_100070721
470 Ga0097620_100072059
471 Ga0097620_100075777
472 Ga0075435_100002448
473 Ga0075435_100005882
474 Ga0075435_100007708
475 Ga0111539_10002484
476 Ga0111539_10004246
477 Ga0111539_10040787
478 Ga0111539_10055431
479 Ga0111539_10223694
480 Ga0105247_10000005
481 Ga0105247_10020566
482 Ga0114129_10025862
483 Ga0114129_10037231
484 Ga0114129_10043575
485 Ga0114129_10066642
486 Ga0114129_10099418
487 Ga0114129_10150660
488 Ga0114129_10152938
489 Ga0114129_10178578
490 Ga0114129_10180026
491 Ga0114129_10187291
492 Ga0114129_10301466
493 Ga0105243_10000112
494 Ga0105243_10000318
495 Ga0105243_10008476
496 Ga0105243_10180257
497 Ga0105241_10004663
498 Ga0105242_10000067
499 Ga0105242_10133363
500 Ga0105248_10016465
501 Ga0105248_10019192
502 Ga0105248_10100420
503 Ga0105248_10193281
504 Ga0105237_10016252
505 Ga0105237_10019610
506 Ga0105237_10173416
507 Ga0105249_10000018
508 Ga0105249_10091045
509 Ga0105249_10165483
510 Ga0157373_10018911
511 Ga0157373_10117027
512 Ga0157374_10048347
513 Ga0157378_10000679
514 Ga0157378_10004360
515 Ga0157378_10051034
516 Ga0157378_10112270
517 Ga0163162_10000001
518 Ga0163162_10008423
519 Ga0163162_10057731
520 Ga0163162_10168873
521 Ga0157372_10007062
522 Ga0157372_10039339
523 Ga0157375_10002828
524 Ga0157375_10005734
525 Ga0157375_10012297
526 Ga0157375_10049872
527 Ga0163163_10010282
528 Ga0163163_10029055
529 Ga0157380_10026125
530 Ga0157380_10044785
531 Ga0157380_10065350
532 Ga0157379_10022519
533 Ga0157379_10091152
534 Ga0157379_10123345
535 Ga0207672_1000417
536 Ga0207656_10003443
537 Ga0207653_10000366
538 Ga0207653_10008832
539 Ga0207710_10000004
540 Ga0207710_10000525
541 Ga0207688_10084093
542 Ga0207647_10003917
543 Ga0207647_10051796
544 Ga0207685_10000010
545 Ga0207643_10015330
546 Ga0207684_10000146
547 Ga0207684_10002322
548 Ga0207684_10007974
549 Ga0207684_10011672
550 Ga0207707_10000063
551 Ga0207707_10024955
552 Ga0207695_10163575
553 Ga0207671_10009546
554 Ga0207660_10000454
555 Ga0207660_10036622
556 Ga0207662_10051601
557 Ga0207652_10000091
558 Ga0207646_10000308
559 Ga0207646_10012584
560 Ga0207646_10014105
561 Ga0207646_10025250
562 Ga0207646_10127263
563 Ga0207650_10000007
564 Ga0207650_10046002
565 Ga0207644_10009860
566 Ga0207690_10066019
567 Ga0207686_10000006
568 Ga0207686_10000604
569 Ga0207686_10070823
570 Ga0207709_10000037
571 Ga0207709_10001210
572 Ga0207709_10002865
573 Ga0207670_10016284
574 Ga0207704_10066682
575 Ga0207691_10002907
576 Ga0207711_10013436
577 Ga0207711_10164551
578 Ga0207689_10002120
579 Ga0207689_10003711
580 Ga0207689_10013839
581 Ga0207689_10027635
582 Ga0207689_10050816
583 Ga0207689_10065049
584 Ga0207679_10020722
585 Ga0207712_10000022
586 Ga0207712_10018817
587 Ga0207712_10081119
588 Ga0207640_10037851
589 Ga0207677_10001924
590 Ga0207703_10008499
591 Ga0207703_10014766
592 Ga0207703_10075336
593 Ga0207703_10138201
594 Ga0207708_10001408
595 Ga0207708_10018628
596 Ga0207708_10024141
597 Ga0207708_10037020
598 Ga0207648_10102474
599 Ga0207676_10003647
600 Ga0207676_10021758
601 Ga0207674_10000497
602 Ga0207674_10068873
603 Ga0207674_10072748
604 Ga0207675_100000187
605 Ga0207675_100016097
606 Ga0207675_100098496
607 Ga0207675_100146418
608 Ga0207683_10076080
609 Ga0207698_10011371
610 Ga0207428_10002035
611 Ga0268266_10023473
612 Ga0268264_10019203
613 Ga0268264_10074981
614 Ga0268264_10158256
615 Ga0265339_10012533
616 Ga0265316_10002032
617 Ga0265314_10000001
618 Ga0307406_10001500
619 Ga0307412_10008633
620 Ga0307415_100006370
621 Ga0373951_0003030
622 Ga0373942_0005114
623 Ga0395900_0155925
624 Ga0395901_0192814
625 Ga0242420_003418
626 Ga0451807_0271026
627 Ga0451576_0171657
628 Ga0495663_0000266
629 Ga0495598_0000041
630 Ga0495621_0000196
631 Ga0496104_0076926
632 Ga0496106_0009843
633 Ga0496107_0111951
634 Ga0496108_0020453
635 Ga0501291_001375
636 Ga0501033_0041215
637 Ga0501036_0031081
638 Ga0501038_0002138
639 Ga0501039_0012089
640 Ga0501041_0003767
641 Ga0501042_0002255
642 Ga0501046_0017341
643 Ga0501048_0011972
644 Ga0501071_0013307
645 Ga0501071_0017664
646 Ga0501072_0003718
647 Ga0501075_0003395
648 Ga0501075_0046766
649 Ga0501076_0000866
650 Ga0501077_0001279
651 Ga0501202_004780
652 Ga0501217_000121
653 Ga0501217_001452
654 Ga0501223_000295
655 Ga0501230_001794
656 Ga0501233_001578
657 Ga0501249_004366
658 Ga0501257_004750
659 Ga0501225_0014052
660 Ga0501079_0016627
661 Ga0501079_0084011
662 Ga0501080_0030945
663 Ga0501081_0001300
664 Ga0501083_0013931
665 Ga0501045_0004652
666 nmdc:mga05p37_150740_c1
667 nmdc:mga05p37_27218_c1
668 nmdc:mga05p37_314964_c1
669 nmdc:mga05p37_363440_c1
670 nmdc:mga09592_20857_c1
671 nmdc:mga06r32_83186_c1
672 nmdc:mga08y16_41786_c1
673 nmdc:mga0n895_11555_c1
674 nmdc:mga0n895_209356_c1
675 nmdc:mga0n895_71580_c1
676 nmdc:mga0n895_9948_c1
677 nmdc:mga0rr50_1648_c1
678 nmdc:mga0rr50_59819_c1
679 nmdc:mga0rr50_78749_c1
680 nmdc:mga08x19_2986_c1
681 nmdc:mga08x19_5706_c1
682 nmdc:mga0a205_111871_c1
683 nmdc:mga0a205_140488_c1
684 nmdc:mga0a205_151888_c1
685 nmdc:mga0a205_185_c2
686 nmdc:mga0a205_2765_c1
687 nmdc:mga0a205_77493_c1
688 Ga0501084_0005696
689 Ga0501082_0006005
690 Ga0530510_0001606

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14520

HHH_5

Helix-hairpin-helix domain

141

198

0.9

PF14716

HHH_8

Helix-hairpin-helix domain

56

122

0.89

PF02811

PHP

PHP domain

381

542

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1m65-assembly1.cif.gz_A ycdx protein 0.8178 343 572
1pb0-assembly1.cif.gz_A ycdx protein in autoinhibited state 0.8068 343 572
3lqc-assembly1.cif.gz_B x-ray crystal structure of oxidized xrcc1 bound to dna pol beta palm thumb domain 0.8009 158 320
1pb0-assembly1.cif.gz_C ycdx protein in autoinhibited state 0.7836 343 572
2yxo-assembly1.cif.gz_B histidinol phosphate phosphatase complexed with sulfate 0.7796 344 540
ID Description Score Start End Superfamily
af_P96221_92_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9683 338 573 3.20.20.140
2w9mA05 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9672 333 573 3.20.20.140
3b0yA01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;DNA polymerase beta, N-terminal domain-like 0.9573 8 89 1.10.150.110
af_Q2FZD4_322_570_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9566 334 573 3.20.20.140
af_Q2FZD4_152_259_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9543 161 264 3.30.460.10
ID Description Score Start End GO Terms
AF-A0A2V6CHE7-F1-model_v4 Histidinol-phosphatase 0.9813 187 279 GO:0003677
GO:0003887
GO:0006281
AF-A0A6L6BHJ6-F1-model_v4 deleted 0.9737 347 573
AF-A0A7K4FNA5-F1-model_v4 PHP domain-containing protein 0.9725 310 574 GO:0005829
GO:0008270
GO:0042578
AF-A0A7W1KNZ3-F1-model_v4 PHP domain-containing protein 0.9721 414 574 GO:0005829
GO:0008270
GO:0042578
AF-A0A259HI57-F1-model_v4 Histidinol-phosphatase 0.9719 347 574 GO:0005829
GO:0008270
GO:0042578

Map