F415909

General Info

Members Datasets Scaffolds Average Seq Length
344 179 688 338

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10051570|Ga0075364_100515702
Length 384
Sequence VSDPDVPEPLGDEPLPADAVVPDSPAGLFGADGSLVPTPEPARPASPTSVPDGQRILGIETSCDETAAAVVIDAHHVLSSVVSSQVDLHARFGGVVPEIASRAHVELLTPVVAQALIEAGLDDGHVDAVAATCGPGLIGALLVGVSAAKALALVWDVPFVAVNHLEAHLYAAFLEEPDIELPLVVLLVSGGHTMIVLMEGHGRYRLLGSTIDDAAGEAFDKVARYLGLGYPGGPAIDRVAMEGDPHAIAFPRAILDEGFDFSFSGLKTAVVNHVRKNPEVATPDVAASFQEAVVDVLITKARRAAREHGAKGLCLAGGVAANSQLRERALDACMEDGLHPFLPSRSMCTDNAAMVAAAGWWRLNRDGPSPLDTGATPGLKLPVL

Samples

Sample ID Description Type Environment
1 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
49 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
50 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
59 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
60 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
67 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
68 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
69 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
70 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
71 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
78 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
86 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
87 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
88 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
89 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
90 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
100 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
160 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
161 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
170 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
173 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
178 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
179 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.42
Metatranscriptomes 0.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.88
Nodule 0
Rhizoplane 2.33
Rhizosphere 86.63
Stem 0
Stem Tuber 0
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075364_10051570 3300006051 Bacteria 2687
2 JGI24751J29686_10000955 3300002459 Bacteria 6397
3 JGI25407J50210_10001124 3300003373 Bacteria 5897
4 JGI25407J50210_10045350 3300003373 Bacteria 1121
5 Ga0070675_100260628 3300005354 Bacteria 1519
6 Ga0070671_100013958 3300005355 Bacteria 6484
7 Ga0070694_100133564 3300005444 Bacteria 1796
8 Ga0070708_100027145 3300005445 Bacteria 4910
9 Ga0070706_100018050 3300005467 Bacteria 6507
10 Ga0070706_100025469 3300005467 Bacteria 5445
11 Ga0070707_100274671 3300005468 Bacteria 1638
12 Ga0070699_100107311 3300005518 Bacteria 2450
13 Ga0068858_100046048 3300005842 Bacteria 4044
14 Ga0068860_100092348 3300005843 Bacteria 2884
15 Ga0068860_100287940 3300005843 Bacteria 1607
16 Ga0068862_100051106 3300005844 Bacteria 3535
17 Ga0081455_10009968 3300005937 Bacteria 9715
18 Ga0081455_10017542 3300005937 Bacteria 6858
19 Ga0081455_10064517 3300005937 Bacteria 3066
20 Ga0081538_10000001 3300005981 Bacteria 249890
21 Ga0081538_10000994 3300005981 Bacteria 30109
22 Ga0081538_10004432 3300005981 Bacteria 12943
23 Ga0081539_10013854 3300005985 Bacteria 6032
24 Ga0075365_10001254 3300006038 Bacteria 11250
25 Ga0075365_10082083 3300006038 Bacteria 2185
26 Ga0075368_10018748 3300006042 Bacteria 2604
27 Ga0075363_100006091 3300006048 Bacteria 5443
28 Ga0075363_100006549 3300006048 Bacteria 5302
29 Ga0075363_100120428 3300006048 Bacteria 1465
30 Ga0075364_10014828 3300006051 Bacteria 4822
31 Ga0075364_10060496 3300006051 Bacteria 2484
32 Ga0075367_10002656 3300006178 Bacteria 8236
33 Ga0075367_10036869 3300006178 Bacteria 2838
34 Ga0075370_10086208 3300006353 Bacteria 1808
35 Ga0075428_100000612 3300006844 Bacteria 36453
36 Ga0075428_100001920 3300006844 Bacteria 22302
37 Ga0075430_100000371 3300006846 Bacteria 32893
38 Ga0075430_100068704 3300006846 Bacteria 2972
39 Ga0075430_100097046 3300006846 Bacteria 2463
40 Ga0075430_100205004 3300006846 Bacteria 1637
41 Ga0075431_100004035 3300006847 Bacteria 14302
42 Ga0075429_100002350 3300006880 Bacteria 15909
43 Ga0075429_100010709 3300006880 Bacteria 7930
44 Ga0075429_100236940 3300006880 Bacteria 1598
45 Ga0075436_100229327 3300006914 Bacteria 1319
46 Ga0075435_100270682 3300007076 Bacteria 1449
47 Ga0111539_10003316 3300009094 Bacteria 21245
48 Ga0111539_10073342 3300009094 Bacteria 4036
49 Ga0111539_10220855 3300009094 Bacteria 2207
50 Ga0111539_10229794 3300009094 Bacteria 2160
51 Ga0105245_10020223 3300009098 Bacteria 5835
52 Ga0105245_10055998 3300009098 Bacteria 3543
53 Ga0105245_10098955 3300009098 Bacteria 2696
54 Ga0114129_10000091 3300009147 Bacteria 86444
55 Ga0114129_10409630 3300009147 Bacteria 1785
56 Ga0157378_10101431 3300013297 Bacteria 2629
57 Ga0157375_10327534 3300013308 Bacteria 1697
58 Ga0163161_10126488 3300017792 Bacteria 1925
59 Ga0213873_10003150 3300021358 Bacteria 2945
60 Ga0213876_10000522 3300021384 Bacteria 29437
61 Ga0213876_10024409 3300021384 Bacteria 3192
62 Ga0224712_10027101 3300022467 Bacteria 2035
63 Ga0224712_10054637 3300022467 Bacteria 1568
64 Ga0207684_10028581 3300025910 Bacteria 4751
65 Ga0207684_10124549 3300025910 Bacteria 2211
66 Ga0207684_10173952 3300025910 Bacteria 1856
67 Ga0207646_10056638 3300025922 Bacteria 3503
68 Ga0207659_10105086 3300025926 Bacteria 2136
69 Ga0207687_10016483 3300025927 Bacteria 4854
70 Ga0207687_10043613 3300025927 Bacteria 3091
71 Ga0207644_10094470 3300025931 Bacteria 2234
72 Ga0207668_10065998 3300025972 Bacteria 2563
73 Ga0207703_10015142 3300026035 Bacteria 6020
74 Ga0209813_10024993 3300027866 Bacteria 1714
75 Ga0207428_10071256 3300027907 Bacteria 2730
76 Ga0268264_10049521 3300028381 Bacteria 3496
77 Ga0268264_10072222 3300028381 Bacteria 2926
78 Ga0265338_10026042 3300028800 Bacteria 5914
79 Ga0265338_10133234 3300028800 Bacteria 1958
80 Ga0265320_10025650 3300031240 Unclassified 3096
81 Ga0265325_10000665 3300031241 Bacteria 25053
82 Ga0265329_10014117 3300031242 Unclassified 2826
83 Ga0265339_10020363 3300031249 Bacteria 3876
84 Ga0265327_10001686 3300031251 Bacteria 26426
85 Ga0265327_10003141 3300031251 Bacteria 16220
86 Ga0265316_10000089 3300031344 Bacteria 97347
87 Ga0265316_10000304 3300031344 Bacteria 55168
88 Ga0265316_10046398 3300031344 Bacteria 3443
89 Ga0265313_10002204 3300031595 Bacteria 17219
90 Ga0316575_10005209 3300031665 Bacteria 4625
91 Ga0316575_10062455 3300031665 Bacteria 1490
92 Ga0265314_10052557 3300031711 Bacteria 2831
93 Ga0265342_10000200 3300031712 Bacteria 66972
94 Ga0316576_10019187 3300031727 Bacteria 4683
95 Ga0316576_10062534 3300031727 Bacteria 2730
96 Ga0316576_10074795 3300031727 Bacteria 2505
97 Ga0316578_10047315 3300031728 Bacteria 2509
98 Ga0316578_10065784 3300031728 Bacteria 2141
99 Ga0316577_10009538 3300031733 Bacteria 5224
100 Ga0316577_10065269 3300031733 Bacteria 2032
101 Ga0307413_10008589 3300031824 Bacteria 4835
102 Ga0307413_10062113 3300031824 Bacteria 2309
103 Ga0307406_10178713 3300031901 Bacteria 1543
104 Ga0307407_10031518 3300031903 Bacteria 2872
105 Ga0307409_100006355 3300031995 Bacteria 6934
106 Ga0307409_100018834 3300031995 Bacteria 4656
107 Ga0307416_100087884 3300032002 Bacteria 2655
108 Ga0307416_100120585 3300032002 Bacteria 2336
109 Ga0307415_100012034 3300032126 Bacteria 4986
110 Ga0316583_10025722 3300032133 Bacteria 2102
111 Ga0316583_10028118 3300032133 Bacteria 2006
112 Ga0316585_10044631 3300032137 Bacteria 1417
113 Ga0373930_0000431 3300034816 Bacteria 5610
114 Ga0373928_0003596 3300035084 Bacteria 2957
115 Ga0373929_0000315 3300035085 Bacteria 8958
116 Ga0316574_0001314 3300035398 Bacteria 11632
117 Ga0316574_0046847 3300035398 Bacteria 2682
118 Ga0316574_0061544 3300035398 Bacteria 2357
119 Ga0316574_0131440 3300035398 Bacteria 1611
120 Ga0316574_0131901 3300035398 Bacteria 1608
121 Ga0316574_0136516 3300035398 Bacteria 1579
122 Ga0316574_0196875 3300035398 Bacteria 1295
123 Ga0373931_0000003 3300035691 Bacteria 560286
124 Ga0373931_0000160 3300035691 Bacteria 29263
125 Ga0373927_0001939 3300035695 Bacteria 15276
126 Ga0373933_0210745 3300035724 Bacteria 1245
127 Ga0373937_0037055 3300036401 Bacteria 4444
128 Ga0373937_0064041 3300036401 Bacteria 3382
129 Ga0316582_0008906 3300036647 Bacteria 5418
130 Ga0316582_0028761 3300036647 Bacteria 3370
131 Ga0316584_0005933 3300036712 Bacteria 8244
132 Ga0316584_0052522 3300036712 Bacteria 3048
133 Ga0316584_0055267 3300036712 Bacteria 2972
134 Ga0316584_0114294 3300036712 Bacteria 2019
135 Ga0373925_0002754 3300037068 Bacteria 13908
136 Ga0373925_0013688 3300037068 Bacteria 5875
137 Ga0395899_0007856 3300037312 Bacteria 8221
138 Ga0395900_0069173 3300037418 Bacteria 3628
139 Ga0395905_0026829 3300037471 Bacteria 5433
140 Ga0395905_0071280 3300037471 Bacteria 3258
141 Ga0395905_0163195 3300037471 Bacteria 2094
142 Ga0395901_0031547 3300038443 Bacteria 5463
143 Ga0436365_0087550 3300039437 Bacteria 6020
144 Ga0436365_0298223 3300039437 Bacteria 74249
145 Ga0436362_0121989 3300039453 Bacteria 4402
146 Ga0439465_0035356 3300041413 Bacteria 1602
147 Ga0439448_0029858 3300042005 Bacteria 1727
148 Ga0439434_0001674 3300042435 Bacteria 6421
149 Ga0439464_0001413 3300042439 Bacteria 5640
150 Ga0439460_0004034 3300042461 Bacteria 3568
151 Ga0451577_0035742 3300042876 Bacteria 4475
152 Ga0453684_0000205 3300044712 Bacteria 257921
153 Ga0453684_0001893 3300044712 Bacteria 54316
154 Ga0453684_0117566 3300044712 Bacteria 3217
155 Ga0451576_0000082 3300045051 Bacteria 237045
156 Ga0451576_0000413 3300045051 Bacteria 99225
157 Ga0451576_0187147 3300045051 Bacteria 2162
158 Ga0466967_0253854 3300045976 Bacteria 1681
159 Ga0495629_0001488 3300046459 Bacteria 18465
160 Ga0495629_0267527 3300046459 Bacteria 1174
161 Ga0495641_0024142 3300046461 Bacteria 3005
162 Ga0495651_0023356 3300046462 Bacteria 4807
163 Ga0495582_0001842 3300046473 Bacteria 11973
164 Ga0495639_0054029 3300046475 Bacteria 1831
165 Ga0495584_0083442 3300046491 Bacteria 1609
166 Ga0495608_0010783 3300046511 Bacteria 6370
167 Ga0495608_0017160 3300046511 Bacteria 5011
168 Ga0495630_0074434 3300046517 Bacteria 2558
169 Ga0495621_0006766 3300046539 Bacteria 3364
170 Ga0495667_0017816 3300046559 Bacteria 4798
171 Ga0495656_0041182 3300046615 Bacteria 1929
172 Ga0495634_0059059 3300046642 Bacteria 2555
173 Ga0495657_0011697 3300046675 Bacteria 6547
174 Ga0495657_0078008 3300046675 Bacteria 2148
175 Ga0495599_0175628 3300046678 Bacteria 1321
176 Ga0495599_0177396 3300046678 Bacteria 1314
177 Ga0495623_0010806 3300046679 Bacteria 5910
178 Ga0495658_0019460 3300046683 Bacteria 3544
179 Ga0495613_0001080 3300046689 Bacteria 20796
180 Ga0495613_0012816 3300046689 Bacteria 6234
181 Ga0495613_0154953 3300046689 Bacteria 1632
182 Ga0495600_0070345 3300046809 Bacteria 2286
183 Ga0495581_0001221 3300047315 Bacteria 14155
184 Ga0495672_0004269 3300047320 Bacteria 11798
185 Ga0495680_0049132 3300047322 Bacteria 3306
186 Ga0495680_0197675 3300047322 Bacteria 1444
187 Ga0495680_0212397 3300047322 Bacteria 1385
188 Ga0495675_0024226 3300047444 Bacteria 3869
189 Ga0495602_0137423 3300048088 Bacteria 1939
190 Ga0496108_0028854 3300048911 Bacteria 4592
191 Ga0496108_0042187 3300048911 Bacteria 3809
192 Ga0496109_0053199 3300048912 Bacteria 3692
193 Ga0496110_0019881 3300048913 Bacteria 5660
194 Ga0496111_0161197 3300048914 Bacteria 1665
195 Ga0496113_0204112 3300048916 Bacteria 1572
196 Ga0496114_0060367 3300048917 Bacteria 3169
197 Ga0496115_0085744 3300048918 Bacteria 2569
198 Ga0501031_0008621 3300049568 Bacteria 6630
199 Ga0501031_0118569 3300049568 Bacteria 1729
200 Ga0501032_0003902 3300049569 Bacteria 11311
201 Ga0501032_0246936 3300049569 Bacteria 1159
202 Ga0501033_0024042 3300049570 Bacteria 4597
203 Ga0501033_0038303 3300049570 Bacteria 3586
204 Ga0501033_0143544 3300049570 Bacteria 1725
205 Ga0501033_0250603 3300049570 Bacteria 1255
206 Ga0501034_0001108 3300049571 Bacteria 37791
207 Ga0501034_0001442 3300049571 Bacteria 31529
208 Ga0501034_0159224 3300049571 Bacteria 2230
209 Ga0501034_0275636 3300049571 Bacteria 1622
210 Ga0501036_0005260 3300049572 Bacteria 10469
211 Ga0501036_0009371 3300049572 Bacteria 8053
212 Ga0501037_0004077 3300049573 Bacteria 10590
213 Ga0501037_0005271 3300049573 Bacteria 9408
214 Ga0501038_0029818 3300049574 Bacteria 4832
215 Ga0501038_0034233 3300049574 Bacteria 4469
216 Ga0501039_0008304 3300049575 Bacteria 7912
217 Ga0501039_0162380 3300049575 Bacteria 1756
218 Ga0501039_0429282 3300049575 Bacteria 1038
219 Ga0501040_0002577 3300049576 Bacteria 11690
220 Ga0501040_0008744 3300049576 Bacteria 6577
221 Ga0501040_0064342 3300049576 Bacteria 2525
222 Ga0501041_0002355 3300049577 Bacteria 10700
223 Ga0501041_0005180 3300049577 Bacteria 7610
224 Ga0501042_0075196 3300049578 Bacteria 2417
225 Ga0501043_0001465 3300049579 Bacteria 20634
226 Ga0501046_0007927 3300049580 Bacteria 9298
227 Ga0501046_0171277 3300049580 Bacteria 1629
228 Ga0501047_0091697 3300049581 Bacteria 2917
229 Ga0501047_0290083 3300049581 Bacteria 1480
230 Ga0501048_0033317 3300049582 Bacteria 3722
231 Ga0501068_0000357 3300049584 Bacteria 22941
232 Ga0501068_0022766 3300049584 Bacteria 3667
233 Ga0501068_0023580 3300049584 Bacteria 3607
234 Ga0501068_0181821 3300049584 Bacteria 1330
235 Ga0501069_0000226 3300049585 Bacteria 25200
236 Ga0501069_0008594 3300049585 Bacteria 5371
237 Ga0501069_0013812 3300049585 Bacteria 4310
238 Ga0501069_0095451 3300049585 Bacteria 1684
239 Ga0501070_0000089 3300049586 Bacteria 77368
240 Ga0501070_0009200 3300049586 Bacteria 8352
241 Ga0501071_0004177 3300049587 Bacteria 9142
242 Ga0501071_0017082 3300049587 Bacteria 4999
243 Ga0501072_0006199 3300049588 Bacteria 9105
244 Ga0501072_0027226 3300049588 Bacteria 4460
245 Ga0501072_0051914 3300049588 Bacteria 3228
246 Ga0501072_0110643 3300049588 Bacteria 2186
247 Ga0501072_0113480 3300049588 Bacteria 2157
248 Ga0501073_0004056 3300049589 Bacteria 11006
249 Ga0501074_0004615 3300049590 Bacteria 9867
250 Ga0501074_0010763 3300049590 Bacteria 6646
251 Ga0501074_0105219 3300049590 Bacteria 2020
252 Ga0501074_0122870 3300049590 Bacteria 1857
253 Ga0501074_0325461 3300049590 Bacteria 1091
254 Ga0501075_0000483 3300049591 Bacteria 23766
255 Ga0501075_0014134 3300049591 Bacteria 5718
256 Ga0501075_0079258 3300049591 Bacteria 2486
257 Ga0501076_0002980 3300049592 Bacteria 11751
258 Ga0501076_0005864 3300049592 Bacteria 8859
259 Ga0501076_0110327 3300049592 Bacteria 2224
260 Ga0501076_0144353 3300049592 Bacteria 1935
261 Ga0501076_0228369 3300049592 Bacteria 1521
262 Ga0501077_0003990 3300049593 Bacteria 8905
263 Ga0501077_0081817 3300049593 Bacteria 2046
264 Ga0501079_0019727 3300049741 Bacteria 5150
265 Ga0501079_0021054 3300049741 Bacteria 4985
266 Ga0501079_0026382 3300049741 Bacteria 4454
267 Ga0501079_0036334 3300049741 Bacteria 3795
268 Ga0501079_0284130 3300049741 Bacteria 1294
269 Ga0501080_0006256 3300049742 Bacteria 10685
270 Ga0501080_0009064 3300049742 Bacteria 9057
271 Ga0501080_0039053 3300049742 Bacteria 4430
272 Ga0501080_0073118 3300049742 Bacteria 3189
273 Ga0501080_0081179 3300049742 Bacteria 3013
274 Ga0501080_0211275 3300049742 Bacteria 1778
275 Ga0501080_0376983 3300049742 Bacteria 1279
276 Ga0501080_0428396 3300049742 Bacteria 1188
277 Ga0501081_0005908 3300049743 Bacteria 7919
278 Ga0501081_0008509 3300049743 Bacteria 6667
279 Ga0501081_0024177 3300049743 Bacteria 4078
280 Ga0501083_0000361 3300049744 Bacteria 28841
281 Ga0501083_0002408 3300049744 Bacteria 12794
282 Ga0501035_0135901 3300049822 Bacteria 2141
283 Ga0501044_0010417 3300049823 Bacteria 10089
284 Ga0501044_0030280 3300049823 Bacteria 5705
285 Ga0501044_0126912 3300049823 Bacteria 2548
286 Ga0501045_0005107 3300049824 Bacteria 9080
287 Ga0501045_0069426 3300049824 Bacteria 2590
288 nmdc:mga03n38_16554_c1 3300050490 Bacteria 2870
289 nmdc:mga03n38_261739_c1 3300050490 Bacteria 917
290 nmdc:mga03n38_47142_c1 3300050490 Bacteria 1906
291 nmdc:mga03n38_81616_c1 3300050490 Bacteria 1520
292 nmdc:mga00v17_14902_c1 3300050491 Bacteria 4351
293 nmdc:mga00v17_39331_c1 3300050491 Bacteria 2832
294 nmdc:mga00v17_44878_c1 3300050491 Bacteria 2668
295 nmdc:mga0yw44_110875_c1 3300050492 Bacteria 1758
296 nmdc:mga0yw44_235661_c1 3300050492 Bacteria 1215
297 nmdc:mga06z11_49875_c1 3300050494 Bacteria 2137
298 nmdc:mga06z11_6327_c1 3300050494 Bacteria 4807
299 nmdc:mga04h51_35821_c1 3300050495 Bacteria 1593
300 nmdc:mga07m45_37976_c2 3300050496 Bacteria 2231
301 nmdc:mga05p37_158437_c1 3300050507 Bacteria 2766
302 nmdc:mga05p37_171_c1 3300050507 Bacteria 63303
303 nmdc:mga05p37_63737_c1 3300050507 Bacteria 4536
304 nmdc:mga09592_433141_c1 3300050508 Bacteria 1135
305 nmdc:mga09592_459816_c1 3300050508 Bacteria 1098
306 nmdc:mga09592_5506_c1 3300050508 Bacteria 10300
307 nmdc:mga0qj67_1896_c1 3300050509 Bacteria 14821
308 nmdc:mga0qj67_75530_c1 3300050509 Bacteria 2694
309 nmdc:mga06r32_111049_c1 3300050510 Bacteria 2698
310 nmdc:mga06r32_57086_c1 3300050510 Bacteria 3750
311 nmdc:mga06r32_60721_c1 3300050510 Bacteria 3639
312 nmdc:mga06r32_6216_c1 3300050510 Bacteria 10717
313 nmdc:mga08y16_134426_c1 3300050511 Bacteria 2570
314 nmdc:mga08y16_146938_c1 3300050511 Bacteria 2451
315 nmdc:mga08y16_51554_c1 3300050511 Bacteria 4305
316 nmdc:mga08y16_56862_c1 3300050511 Bacteria 4088
317 nmdc:mga0rr50_398979_c1 3300050513 Bacteria 1161
318 nmdc:mga0sz30_40115_c1 3300050516 Bacteria 1637
319 Ga0495595_0010351 3300053084 Bacteria 3874
320 Ga0495595_0088685 3300053084 Bacteria 1482
321 Ga0495595_0097636 3300053084 Bacteria 1415
322 Ga0495619_0008897 3300053085 Bacteria 6342
323 Ga0500566_0008077 3300053094 Bacteria 6227
324 Ga0500595_033581 3300053119 Bacteria 1702
325 Ga0500568_0000029 3300053139 Bacteria 159927
326 Ga0500604_0031787 3300053151 Bacteria 1552
327 Ga0500616_0000211 3300053153 Bacteria 93551
328 Ga0500616_0006199 3300053153 Bacteria 7890
329 Ga0500616_0011711 3300053153 Bacteria 5164
330 Ga0501084_0000161 3300054114 Bacteria 51615
331 Ga0501084_0000813 3300054114 Bacteria 23929
332 Ga0501084_0024992 3300054114 Bacteria 4984
333 Ga0501084_0025566 3300054114 Bacteria 4925
334 Ga0501084_0177388 3300054114 Bacteria 1798
335 Ga0501084_0247598 3300054114 Bacteria 1505
336 Ga0501082_0007088 3300060353 Bacteria 9674
337 Ga0501082_0109860 3300060353 Bacteria 2387
338 Ga0501082_0127949 3300060353 Bacteria 2203
339 Ga0501082_0261412 3300060353 Bacteria 1506
340 Ga0501082_0289746 3300060353 Bacteria 1425
341 Ga0530510_0002751 3300061734 Bacteria 12079
342 Ga0530510_0002973 3300061734 Bacteria 11624
343 Ga0530510_0007119 3300061734 Bacteria 7788
344 Ga0530510_0128432 3300061734 Bacteria 1864
345 Ga0075364_10051570
346 JGI24751J29686_10000955
347 JGI25407J50210_10001124
348 JGI25407J50210_10045350
349 Ga0070675_100260628
350 Ga0070671_100013958
351 Ga0070694_100133564
352 Ga0070708_100027145
353 Ga0070706_100018050
354 Ga0070706_100025469
355 Ga0070707_100274671
356 Ga0070699_100107311
357 Ga0068858_100046048
358 Ga0068860_100092348
359 Ga0068860_100287940
360 Ga0068862_100051106
361 Ga0081455_10009968
362 Ga0081455_10017542
363 Ga0081455_10064517
364 Ga0081538_10000001
365 Ga0081538_10000994
366 Ga0081538_10004432
367 Ga0081539_10013854
368 Ga0075365_10001254
369 Ga0075365_10082083
370 Ga0075368_10018748
371 Ga0075363_100006091
372 Ga0075363_100006549
373 Ga0075363_100120428
374 Ga0075364_10014828
375 Ga0075364_10060496
376 Ga0075367_10002656
377 Ga0075367_10036869
378 Ga0075370_10086208
379 Ga0075428_100000612
380 Ga0075428_100001920
381 Ga0075430_100000371
382 Ga0075430_100068704
383 Ga0075430_100097046
384 Ga0075430_100205004
385 Ga0075431_100004035
386 Ga0075429_100002350
387 Ga0075429_100010709
388 Ga0075429_100236940
389 Ga0075436_100229327
390 Ga0075435_100270682
391 Ga0111539_10003316
392 Ga0111539_10073342
393 Ga0111539_10220855
394 Ga0111539_10229794
395 Ga0105245_10020223
396 Ga0105245_10055998
397 Ga0105245_10098955
398 Ga0114129_10000091
399 Ga0114129_10409630
400 Ga0157378_10101431
401 Ga0157375_10327534
402 Ga0163161_10126488
403 Ga0213873_10003150
404 Ga0213876_10000522
405 Ga0213876_10024409
406 Ga0224712_10027101
407 Ga0224712_10054637
408 Ga0207684_10028581
409 Ga0207684_10124549
410 Ga0207684_10173952
411 Ga0207646_10056638
412 Ga0207659_10105086
413 Ga0207687_10016483
414 Ga0207687_10043613
415 Ga0207644_10094470
416 Ga0207668_10065998
417 Ga0207703_10015142
418 Ga0209813_10024993
419 Ga0207428_10071256
420 Ga0268264_10049521
421 Ga0268264_10072222
422 Ga0265338_10026042
423 Ga0265338_10133234
424 Ga0265320_10025650
425 Ga0265325_10000665
426 Ga0265329_10014117
427 Ga0265339_10020363
428 Ga0265327_10001686
429 Ga0265327_10003141
430 Ga0265316_10000089
431 Ga0265316_10000304
432 Ga0265316_10046398
433 Ga0265313_10002204
434 Ga0316575_10005209
435 Ga0316575_10062455
436 Ga0265314_10052557
437 Ga0265342_10000200
438 Ga0316576_10019187
439 Ga0316576_10062534
440 Ga0316576_10074795
441 Ga0316578_10047315
442 Ga0316578_10065784
443 Ga0316577_10009538
444 Ga0316577_10065269
445 Ga0307413_10008589
446 Ga0307413_10062113
447 Ga0307406_10178713
448 Ga0307407_10031518
449 Ga0307409_100006355
450 Ga0307409_100018834
451 Ga0307416_100087884
452 Ga0307416_100120585
453 Ga0307415_100012034
454 Ga0316583_10025722
455 Ga0316583_10028118
456 Ga0316585_10044631
457 Ga0373930_0000431
458 Ga0373928_0003596
459 Ga0373929_0000315
460 Ga0316574_0001314
461 Ga0316574_0046847
462 Ga0316574_0061544
463 Ga0316574_0131440
464 Ga0316574_0131901
465 Ga0316574_0136516
466 Ga0316574_0196875
467 Ga0373931_0000003
468 Ga0373931_0000160
469 Ga0373927_0001939
470 Ga0373933_0210745
471 Ga0373937_0037055
472 Ga0373937_0064041
473 Ga0316582_0008906
474 Ga0316582_0028761
475 Ga0316584_0005933
476 Ga0316584_0052522
477 Ga0316584_0055267
478 Ga0316584_0114294
479 Ga0373925_0002754
480 Ga0373925_0013688
481 Ga0395899_0007856
482 Ga0395900_0069173
483 Ga0395905_0026829
484 Ga0395905_0071280
485 Ga0395905_0163195
486 Ga0395901_0031547
487 Ga0436365_0087550
488 Ga0436365_0298223
489 Ga0436362_0121989
490 Ga0439465_0035356
491 Ga0439448_0029858
492 Ga0439434_0001674
493 Ga0439464_0001413
494 Ga0439460_0004034
495 Ga0451577_0035742
496 Ga0453684_0000205
497 Ga0453684_0001893
498 Ga0453684_0117566
499 Ga0451576_0000082
500 Ga0451576_0000413
501 Ga0451576_0187147
502 Ga0466967_0253854
503 Ga0495629_0001488
504 Ga0495629_0267527
505 Ga0495641_0024142
506 Ga0495651_0023356
507 Ga0495582_0001842
508 Ga0495639_0054029
509 Ga0495584_0083442
510 Ga0495608_0010783
511 Ga0495608_0017160
512 Ga0495630_0074434
513 Ga0495621_0006766
514 Ga0495667_0017816
515 Ga0495656_0041182
516 Ga0495634_0059059
517 Ga0495657_0011697
518 Ga0495657_0078008
519 Ga0495599_0175628
520 Ga0495599_0177396
521 Ga0495623_0010806
522 Ga0495658_0019460
523 Ga0495613_0001080
524 Ga0495613_0012816
525 Ga0495613_0154953
526 Ga0495600_0070345
527 Ga0495581_0001221
528 Ga0495672_0004269
529 Ga0495680_0049132
530 Ga0495680_0197675
531 Ga0495680_0212397
532 Ga0495675_0024226
533 Ga0495602_0137423
534 Ga0496108_0028854
535 Ga0496108_0042187
536 Ga0496109_0053199
537 Ga0496110_0019881
538 Ga0496111_0161197
539 Ga0496113_0204112
540 Ga0496114_0060367
541 Ga0496115_0085744
542 Ga0501031_0008621
543 Ga0501031_0118569
544 Ga0501032_0003902
545 Ga0501032_0246936
546 Ga0501033_0024042
547 Ga0501033_0038303
548 Ga0501033_0143544
549 Ga0501033_0250603
550 Ga0501034_0001108
551 Ga0501034_0001442
552 Ga0501034_0159224
553 Ga0501034_0275636
554 Ga0501036_0005260
555 Ga0501036_0009371
556 Ga0501037_0004077
557 Ga0501037_0005271
558 Ga0501038_0029818
559 Ga0501038_0034233
560 Ga0501039_0008304
561 Ga0501039_0162380
562 Ga0501039_0429282
563 Ga0501040_0002577
564 Ga0501040_0008744
565 Ga0501040_0064342
566 Ga0501041_0002355
567 Ga0501041_0005180
568 Ga0501042_0075196
569 Ga0501043_0001465
570 Ga0501046_0007927
571 Ga0501046_0171277
572 Ga0501047_0091697
573 Ga0501047_0290083
574 Ga0501048_0033317
575 Ga0501068_0000357
576 Ga0501068_0022766
577 Ga0501068_0023580
578 Ga0501068_0181821
579 Ga0501069_0000226
580 Ga0501069_0008594
581 Ga0501069_0013812
582 Ga0501069_0095451
583 Ga0501070_0000089
584 Ga0501070_0009200
585 Ga0501071_0004177
586 Ga0501071_0017082
587 Ga0501072_0006199
588 Ga0501072_0027226
589 Ga0501072_0051914
590 Ga0501072_0110643
591 Ga0501072_0113480
592 Ga0501073_0004056
593 Ga0501074_0004615
594 Ga0501074_0010763
595 Ga0501074_0105219
596 Ga0501074_0122870
597 Ga0501074_0325461
598 Ga0501075_0000483
599 Ga0501075_0014134
600 Ga0501075_0079258
601 Ga0501076_0002980
602 Ga0501076_0005864
603 Ga0501076_0110327
604 Ga0501076_0144353
605 Ga0501076_0228369
606 Ga0501077_0003990
607 Ga0501077_0081817
608 Ga0501079_0019727
609 Ga0501079_0021054
610 Ga0501079_0026382
611 Ga0501079_0036334
612 Ga0501079_0284130
613 Ga0501080_0006256
614 Ga0501080_0009064
615 Ga0501080_0039053
616 Ga0501080_0073118
617 Ga0501080_0081179
618 Ga0501080_0211275
619 Ga0501080_0376983
620 Ga0501080_0428396
621 Ga0501081_0005908
622 Ga0501081_0008509
623 Ga0501081_0024177
624 Ga0501083_0000361
625 Ga0501083_0002408
626 Ga0501035_0135901
627 Ga0501044_0010417
628 Ga0501044_0030280
629 Ga0501044_0126912
630 Ga0501045_0005107
631 Ga0501045_0069426
632 nmdc:mga03n38_16554_c1
633 nmdc:mga03n38_261739_c1
634 nmdc:mga03n38_47142_c1
635 nmdc:mga03n38_81616_c1
636 nmdc:mga00v17_14902_c1
637 nmdc:mga00v17_39331_c1
638 nmdc:mga00v17_44878_c1
639 nmdc:mga0yw44_110875_c1
640 nmdc:mga0yw44_235661_c1
641 nmdc:mga06z11_49875_c1
642 nmdc:mga06z11_6327_c1
643 nmdc:mga04h51_35821_c1
644 nmdc:mga07m45_37976_c2
645 nmdc:mga05p37_158437_c1
646 nmdc:mga05p37_171_c1
647 nmdc:mga05p37_63737_c1
648 nmdc:mga09592_433141_c1
649 nmdc:mga09592_459816_c1
650 nmdc:mga09592_5506_c1
651 nmdc:mga0qj67_1896_c1
652 nmdc:mga0qj67_75530_c1
653 nmdc:mga06r32_111049_c1
654 nmdc:mga06r32_57086_c1
655 nmdc:mga06r32_60721_c1
656 nmdc:mga06r32_6216_c1
657 nmdc:mga08y16_134426_c1
658 nmdc:mga08y16_146938_c1
659 nmdc:mga08y16_51554_c1
660 nmdc:mga08y16_56862_c1
661 nmdc:mga0rr50_398979_c1
662 nmdc:mga0sz30_40115_c1
663 Ga0495595_0010351
664 Ga0495595_0088685
665 Ga0495595_0097636
666 Ga0495619_0008897
667 Ga0500566_0008077
668 Ga0500595_033581
669 Ga0500568_0000029
670 Ga0500604_0031787
671 Ga0500616_0000211
672 Ga0500616_0006199
673 Ga0500616_0011711
674 Ga0501084_0000161
675 Ga0501084_0000813
676 Ga0501084_0024992
677 Ga0501084_0025566
678 Ga0501084_0177388
679 Ga0501084_0247598
680 Ga0501082_0007088
681 Ga0501082_0109860
682 Ga0501082_0127949
683 Ga0501082_0261412
684 Ga0501082_0289746
685 Ga0530510_0002751
686 Ga0530510_0002973
687 Ga0530510_0007119
688 Ga0530510_0128432

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00814

TsaD

tRNA N6-adenosine threonylcarbamoyltransferase

76

357

0.98

PF22521

HypF_C_2

Carbamoyltransferase, Kae1-like Domain, second subdomain

207

354

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zeu-assembly2.cif.gz_B structure of a salmonella typhimurium ygjd-yeaz heterodimer bound to atpgammas 0.9588 1 331
4wq5-assembly1.cif.gz_A ygjd(v85e)-yeaz heterodimer in complex with atp 0.956 1 332
4ydu-assembly1.cif.gz_A crystal structure of e. coli ygjd-yeaz heterodimer in complex with adp 0.9548 1 331
4wq4-assembly2.cif.gz_B e. coli ygjd(e12a)-yeaz heterodimer in complex with atp 0.9537 1 331
3zeu-assembly2.cif.gz_B structure of a salmonella typhimurium ygjd-yeaz heterodimer bound to atpgammas 0.9532 1 331
ID Description Score Start End Superfamily
af_Q2FWL2_8_131_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9926 6 122 3.30.420.40
af_A0A1D6MRI9_77_194_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9816 5 115 3.30.420.40
af_Q54EW4_18_143_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9721 3 120 3.30.420.40
af_Q93170_24_150_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9703 3 120 3.30.420.40
af_Q32LQ3_26_143_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9697 3 115 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2H5WFV1-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9928 107 332 GO:0008033
GO:0046872
GO:0061711
AF-A0A523VD60-F1-model_v4 tRNA N6-adenosine threonylcarbamoyltransferase (EC 2.3.1.234) (N6-L-threonylcarbamoyladenine synthase) (t(6)A synthase) (t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD) (tRNA threonylcarbamoyladenosine biosynthesis protein TsaD) 0.9892 2 331 GO:0002949
GO:0005506
GO:0005737
GO:0061711
AF-A0A2H5WFV1-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9884 107 332 GO:0008033
GO:0046872
GO:0061711
AF-A0A2N7PJ68-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9867 65 325 GO:0002949
GO:0046872
GO:0061711
AF-A0A2I1Y8G4-F1-model_v4 deleted 0.9855 2 331

Map