F414881

General Info

Members Datasets Scaffolds Average Seq Length
341 189 682 197

Family's Representative Sequence

Representative Sequence 3300047322|Ga0495680_0167475|Ga0495680_0167475_37_762
Length 241
Sequence MVDHFAATGLQLRVDSNCPKPPPGLGSQASRGSGLEVRVMEPGMTGRAISADGTDLTWELPERGRVAMFGLIAAESAIFVIFVVAYLFYVGKSLTGPTPRDVLRVPVFYSICLLSSSLTIHMAVRAIRDGRIGSFRNWWFGTIALGITFLFGTAREWYRLIYEDGLTISTNLFGTTYYSLVGLHGFHVTVGLILLSVVMTFAILGRVTHEQAYRLDVLSLYWHFVDAVWVVVFTVVYVIGR

Samples

Sample ID Description Type Environment
1 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
80 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
81 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
124 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
127 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
128 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
129 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
130 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
131 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
132 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
133 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
134 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
135 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
136 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
137 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
138 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
139 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
140 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
141 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
142 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
143 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
144 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
145 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
146 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
147 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
148 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
149 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
150 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
151 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
152 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
153 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
154 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
155 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
156 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
157 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
158 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
159 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
160 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
161 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
165 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
166 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
167 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.24
Metatranscriptomes 1.76
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.29
Nodule 0
Rhizoplane 0
Rhizosphere 99.12
Stem 0
Stem Tuber 0
Unclassified 12.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495680_0167475 3300047322 Bacteria 1592
2 LJNas_1000024 3300000546 Bacteria 19941
3 JGI25404J52841_10040726 3300003659 Unclassified 983
4 JGI25405J52794_10002838 3300003911 Bacteria 3008
5 JGI25405J52794_10003381 3300003911 Bacteria 2794
6 Ga0058860_12225860 3300004801 Bacteria 1961
7 Ga0065715_10179610 3300005293 Bacteria 1486
8 Ga0070683_100061273 3300005329 Bacteria 3498
9 Ga0070690_100155254 3300005330 Unclassified 1564
10 Ga0070690_100308889 3300005330 Bacteria 1136
11 Ga0070666_10079392 3300005335 Bacteria 2241
12 Ga0070682_100432353 3300005337 Bacteria 1003
13 Ga0070660_100290001 3300005339 Bacteria 1340
14 Ga0070691_10304357 3300005341 Unclassified 872
15 Ga0070661_100010537 3300005344 Bacteria 6427
16 Ga0070692_10414100 3300005345 Bacteria 854
17 Ga0070671_100000183 3300005355 Bacteria 41872
18 Ga0070659_100026437 3300005366 Bacteria 4467
19 Ga0070703_10015882 3300005406 Bacteria 2158
20 Ga0070709_10452999 3300005434 Bacteria 967
21 Ga0070711_100046522 3300005439 Bacteria 2957
22 Ga0070711_100543698 3300005439 Archaea 963
23 Ga0070705_100153023 3300005440 Bacteria 1532
24 Ga0070700_100228360 3300005441 Bacteria 1323
25 Ga0070708_100004232 3300005445 Bacteria 11272
26 Ga0070708_100004675 3300005445 Bacteria 10789
27 Ga0070708_100011196 3300005445 Bacteria 7295
28 Ga0070708_100024298 3300005445 Bacteria 5167
29 Ga0070708_100170368 3300005445 Bacteria 2032
30 Ga0070662_100309852 3300005457 Bacteria 1285
31 Ga0070681_10109854 3300005458 Bacteria 2697
32 Ga0070681_10431626 3300005458 Bacteria 1229
33 Ga0070681_11030883 3300005458 Bacteria 743
34 Ga0070706_100002354 3300005467 Bacteria 19078
35 Ga0070706_100013144 3300005467 Bacteria 7659
36 Ga0070706_100091125 3300005467 Bacteria 2827
37 Ga0070707_100169577 3300005468 Bacteria 2127
38 Ga0070707_100219004 3300005468 Bacteria 1854
39 Ga0070707_100289732 3300005468 Unclassified 1591
40 Ga0070698_100000780 3300005471 Bacteria 34539
41 Ga0070698_100021810 3300005471 Bacteria 6707
42 Ga0070698_100165060 3300005471 Bacteria 2157
43 Ga0070698_100269205 3300005471 Bacteria 1635
44 Ga0070698_100365667 3300005471 Bacteria 1374
45 Ga0070699_100000881 3300005518 Bacteria 27935
46 Ga0070699_100001418 3300005518 Bacteria 22010
47 Ga0070699_100042282 3300005518 Unclassified 3943
48 Ga0070699_100422419 3300005518 Bacteria 1207
49 Ga0070679_100026414 3300005530 Bacteria 5704
50 Ga0070679_100037385 3300005530 Bacteria 4822
51 Ga0070679_100599515 3300005530 Bacteria 1045
52 Ga0070684_100165837 3300005535 Bacteria 2005
53 Ga0070684_100704605 3300005535 Bacteria 941
54 Ga0070684_101062799 3300005535 Unclassified 760
55 Ga0070697_100000668 3300005536 Bacteria 25780
56 Ga0070697_100012065 3300005536 Bacteria 6764
57 Ga0070697_100021839 3300005536 Bacteria 5074
58 Ga0070697_100394363 3300005536 Bacteria 1200
59 Ga0068853_100010649 3300005539 Bacteria 7439
60 Ga0070695_100160972 3300005545 Bacteria 1575
61 Ga0070695_100433850 3300005545 Bacteria 1003
62 Ga0070704_100131797 3300005549 Bacteria 1938
63 Ga0068855_100122095 3300005563 Unclassified 2981
64 Ga0068855_100188031 3300005563 Bacteria 2331
65 Ga0068855_100234751 3300005563 Bacteria 2051
66 Ga0068855_100284399 3300005563 Bacteria 1835
67 Ga0068854_100008428 3300005578 Bacteria 6628
68 Ga0068854_100301350 3300005578 Unclassified 1297
69 Ga0068856_100199482 3300005614 Bacteria 2016
70 Ga0068852_100111907 3300005616 Bacteria 2483
71 Ga0068852_100508310 3300005616 Bacteria 1201
72 Ga0068859_101329454 3300005617 Unclassified 792
73 Ga0068864_100375802 3300005618 Unclassified 1346
74 Ga0068861_100114825 3300005719 Bacteria 2163
75 Ga0068863_100443259 3300005841 Bacteria 1274
76 Ga0068858_100455763 3300005842 Bacteria 1233
77 Ga0068858_100557185 3300005842 Bacteria 1110
78 Ga0081455_10002358 3300005937 Bacteria 22548
79 Ga0081540_1004360 3300005983 Bacteria 10822
80 Ga0070717_10023726 3300006028 Bacteria 4864
81 Ga0070717_10552657 3300006028 Unclassified 1043
82 Ga0070717_11231278 3300006028 Bacteria 681
83 Ga0070716_100115947 3300006173 Bacteria 1668
84 Ga0070716_100126638 3300006173 Bacteria 1608
85 Ga0070716_100170707 3300006173 Bacteria 1419
86 Ga0070712_100021589 3300006175 Bacteria 4230
87 Ga0075427_10002461 3300006194 Bacteria 2485
88 Ga0075428_100011759 3300006844 Bacteria 9745
89 Ga0075428_100227413 3300006844 Bacteria 2013
90 Ga0075428_100821148 3300006844 Bacteria 988
91 Ga0075431_100088299 3300006847 Bacteria 3199
92 Ga0075431_100180662 3300006847 Bacteria 2165
93 Ga0075431_101191367 3300006847 Unclassified 725
94 Ga0075433_10000118 3300006852 Bacteria 39775
95 Ga0075433_10051372 3300006852 Bacteria 3589
96 Ga0075433_10106347 3300006852 Unclassified 2487
97 Ga0075433_10628871 3300006852 Bacteria 942
98 Ga0075434_100174296 3300006871 Bacteria 2171
99 Ga0075434_100208327 3300006871 Bacteria 1976
100 Ga0075434_100209999 3300006871 Bacteria 1967
101 Ga0075434_100263829 3300006871 Bacteria 1741
102 Ga0075434_100303853 3300006871 Bacteria 1616
103 Ga0075434_101095270 3300006871 Unclassified 810
104 Ga0075429_100010855 3300006880 Bacteria 7876
105 Ga0075436_100557203 3300006914 Bacteria 842
106 Ga0097620_101329477 3300006931 Unclassified 792
107 Ga0075435_100010027 3300007076 Bacteria 6907
108 Ga0075435_100428442 3300007076 Bacteria 1140
109 Ga0075435_100485829 3300007076 Unclassified 1067
110 Ga0075435_100950815 3300007076 Unclassified 750
111 Ga0099794_10001467 3300007265 Bacteria 8256
112 Ga0099794_10007544 3300007265 Bacteria 4475
113 Ga0099794_10144997 3300007265 Bacteria 1204
114 Ga0099794_10217409 3300007265 Bacteria 981
115 Ga0099795_10072597 3300007788 Bacteria 1301
116 Ga0099795_10121156 3300007788 Bacteria 1046
117 Ga0105240_10074566 3300009093 Bacteria 4188
118 Ga0105240_10364441 3300009093 Bacteria 1636
119 Ga0111539_10357158 3300009094 Bacteria 1700
120 Ga0111539_11351406 3300009094 Bacteria 827
121 Ga0114129_10012845 3300009147 Bacteria 11917
122 Ga0114129_10022625 3300009147 Bacteria 8915
123 Ga0114129_10081999 3300009147 Bacteria 4483
124 Ga0114129_10144872 3300009147 Bacteria 3254
125 Ga0114129_10320667 3300009147 Bacteria 2060
126 Ga0114129_10403086 3300009147 Bacteria 1802
127 Ga0114129_10421530 3300009147 Bacteria 1755
128 Ga0114129_10480058 3300009147 Archaea 1627
129 Ga0114129_10604572 3300009147 Bacteria 1420
130 Ga0105243_10470265 3300009148 Unclassified 1184
131 Ga0105241_10232735 3300009174 Bacteria 1554
132 Ga0105241_10291824 3300009174 Bacteria 1396
133 Ga0105242_10572666 3300009176 Bacteria 1086
134 Ga0105237_10004050 3300009545 Bacteria 17101
135 Ga0105238_10093270 3300009551 Bacteria 2999
136 Ga0105238_10193044 3300009551 Bacteria 2012
137 Ga0105238_10293709 3300009551 Bacteria 1608
138 Ga0105238_10520715 3300009551 Bacteria 1192
139 Ga0099796_10141706 3300010159 Bacteria 940
140 Ga0099796_10161427 3300010159 Unclassified 889
141 Ga0105239_10494992 3300010375 Bacteria 1390
142 Ga0157373_10814841 3300013100 Bacteria 689
143 Ga0157371_10090823 3300013102 Bacteria 2163
144 Ga0157370_10015568 3300013104 Bacteria 7731
145 Ga0157370_10028580 3300013104 Bacteria 5483
146 Ga0157370_10130731 3300013104 Bacteria 2342
147 Ga0157370_10705809 3300013104 Bacteria 921
148 Ga0157369_10011621 3300013105 Bacteria 9998
149 Ga0157369_10021042 3300013105 Bacteria 7292
150 Ga0157369_10024372 3300013105 Bacteria 6732
151 Ga0157369_10248869 3300013105 Unclassified 1855
152 Ga0157378_10267532 3300013297 Bacteria 1643
153 Ga0157378_10566362 3300013297 Bacteria 1143
154 Ga0163162_10559777 3300013306 Unclassified 1271
155 Ga0163162_10861364 3300013306 Unclassified 1021
156 Ga0157372_10066767 3300013307 Bacteria 4042
157 Ga0157372_10716504 3300013307 Bacteria 1164
158 Ga0157372_11261323 3300013307 Bacteria 853
159 Ga0157379_10248063 3300014968 Bacteria 1616
160 Ga0157379_10272575 3300014968 Bacteria 1539
161 Ga0157376_10028794 3300014969 Bacteria 4419
162 Ga0213871_10007858 3300021441 Unclassified 2326
163 Ga0213871_10141818 3300021441 Unclassified 727
164 Ga0224572_1011574 3300024225 Bacteria 1669
165 Ga0228598_1000110 3300024227 Bacteria 13697
166 Ga0207680_10147718 3300025903 Bacteria 1565
167 Ga0207647_10006296 3300025904 Bacteria 8641
168 Ga0207699_10067198 3300025906 Bacteria 2179
169 Ga0207699_10255248 3300025906 Bacteria 1210
170 Ga0207705_10000013 3300025909 Bacteria 451680
171 Ga0207705_10000645 3300025909 Bacteria 29020
172 Ga0207705_10022701 3300025909 Bacteria 4475
173 Ga0207705_10087821 3300025909 Bacteria 2274
174 Ga0207705_10214007 3300025909 Bacteria 1462
175 Ga0207684_10005155 3300025910 Bacteria 12165
176 Ga0207684_10015751 3300025910 Bacteria 6505
177 Ga0207684_10656353 3300025910 Bacteria 894
178 Ga0207707_10031490 3300025912 Bacteria 4641
179 Ga0207707_10177175 3300025912 Unclassified 1862
180 Ga0207707_10809944 3300025912 Bacteria 780
181 Ga0207695_10052289 3300025913 Bacteria 4281
182 Ga0207695_10052529 3300025913 Bacteria 4269
183 Ga0207695_10198189 3300025913 Bacteria 1923
184 Ga0207693_10011660 3300025915 Bacteria 7111
185 Ga0207663_10227758 3300025916 Bacteria 1360
186 Ga0207660_10132899 3300025917 Unclassified 1896
187 Ga0207660_10289504 3300025917 Bacteria 1302
188 Ga0207657_10001675 3300025919 Bacteria 23908
189 Ga0207657_10244000 3300025919 Bacteria 1433
190 Ga0207649_10051703 3300025920 Bacteria 2546
191 Ga0207652_10041819 3300025921 Bacteria 3898
192 Ga0207646_10001993 3300025922 Bacteria 24540
193 Ga0207646_10200877 3300025922 Bacteria 1801
194 Ga0207694_10214873 3300025924 Unclassified 1567
195 Ga0207650_10272094 3300025925 Bacteria 1377
196 Ga0207687_10682993 3300025927 Bacteria 870
197 Ga0207644_10000120 3300025931 Bacteria 57828
198 Ga0207690_10216159 3300025932 Bacteria 1464
199 Ga0207709_10139185 3300025935 Bacteria 1666
200 Ga0207669_10979762 3300025937 Unclassified 710
201 Ga0207704_10316007 3300025938 Bacteria 1203
202 Ga0207665_10009691 3300025939 Bacteria 6324
203 Ga0207665_10012955 3300025939 Bacteria 5484
204 Ga0207665_10017456 3300025939 Bacteria 4716
205 Ga0207665_10258977 3300025939 Bacteria 1288
206 Ga0207665_10452214 3300025939 Bacteria 986
207 Ga0207711_10086849 3300025941 Bacteria 2743
208 Ga0207661_10314266 3300025944 Bacteria 1407
209 Ga0207661_10423688 3300025944 Bacteria 1209
210 Ga0207667_10020491 3300025949 Bacteria 7353
211 Ga0207667_10025265 3300025949 Bacteria 6504
212 Ga0207712_10131479 3300025961 Bacteria 1908
213 Ga0207640_10049918 3300025981 Bacteria 2712
214 Ga0207677_10505219 3300026023 Bacteria 1046
215 Ga0207703_10325398 3300026035 Bacteria 1409
216 Ga0207678_10001045 3300026067 Bacteria 25304
217 Ga0207678_10006884 3300026067 Bacteria 10085
218 Ga0207708_10159430 3300026075 Bacteria 1781
219 Ga0207641_10407057 3300026088 Bacteria 1307
220 Ga0207676_10247482 3300026095 Unclassified 1603
221 Ga0207674_10001390 3300026116 Bacteria 31168
222 Ga0207675_100135446 3300026118 Bacteria 2337
223 Ga0207698_10050062 3300026142 Bacteria 3184
224 Ga0209588_1000903 3300027671 Bacteria 7548
225 Ga0209588_1033760 3300027671 Bacteria 1642
226 Ga0209588_1045066 3300027671 Bacteria 1427
227 Ga0209588_1064345 3300027671 Bacteria 1185
228 Ga0207428_10278506 3300027907 Bacteria 1242
229 Ga0268265_10030923 3300028380 Bacteria 3862
230 Ga0268264_10282106 3300028381 Bacteria 1556
231 Ga0265338_10128157 3300028800 Unclassified 2009
232 Ga0265762_1000755 3300030760 Bacteria 5776
233 Ga0265762_1003285 3300030760 Bacteria 2892
234 Ga0265762_1024156 3300030760 Bacteria 1129
235 Ga0265760_10022255 3300031090 Bacteria 1837
236 Ga0265760_10033230 3300031090 Bacteria 1524
237 Ga0265325_10026819 3300031241 Bacteria 3117
238 Ga0265339_10283818 3300031249 Bacteria 793
239 Ga0307508_10058946 3300031616 Bacteria 3396
240 Ga0265314_10076001 3300031711 Bacteria 2233
241 Ga0373926_0096657 3300035083 Unclassified 1102
242 Ga0373953_0005698 3300035117 Bacteria 4061
243 Ga0373954_0000189 3300035118 Bacteria 22316
244 Ga0373956_0002639 3300035119 Bacteria 7266
245 Ga0373956_0093971 3300035119 Bacteria 1385
246 Ga0373957_0007336 3300035120 Unclassified 3526
247 Ga0373957_0071477 3300035120 Bacteria 1358
248 Ga0373955_0000259 3300035172 Bacteria 22026
249 Ga0373924_0213991 3300035410 Unclassified 851
250 Ga0373927_0023507 3300035695 Bacteria 4037
251 Ga0373933_0060915 3300035724 Bacteria 2276
252 Ga0373937_0000123 3300036401 Bacteria 74156
253 Ga0373937_0009215 3300036401 Bacteria 8568
254 Ga0242420_028312 3300038996 Bacteria 1031
255 Ga0436360_0102429 3300039438 Bacteria 5308
256 Ga0436360_0646686 3300039438 Unclassified 1268
257 Ga0436361_0918625 3300039447 Bacteria 9025
258 Ga0436362_0737467 3300039453 Bacteria 10520
259 Ga0439460_0024433 3300042461 Bacteria 1674
260 Ga0453683_0646024 3300044673 Bacteria 691
261 Ga0451576_0188861 3300045051 Bacteria 2152
262 Ga0495592_0127229 3300046454 Unclassified 1785
263 Ga0495580_0006958 3300046472 Bacteria 9123
264 Ga0495664_0125259 3300046477 Bacteria 1554
265 Ga0495594_0169399 3300046499 Bacteria 1242
266 Ga0495606_0288209 3300046507 Unclassified 894
267 Ga0495652_0050420 3300046529 Bacteria 3558
268 Ga0495640_0246070 3300046533 Bacteria 1121
269 Ga0495587_0000303 3300046536 Bacteria 35065
270 Ga0495587_0021153 3300046536 Bacteria 4012
271 Ga0495667_0007246 3300046559 Bacteria 7527
272 Ga0495667_0013274 3300046559 Bacteria 5576
273 Ga0495625_0000033 3300046660 Bacteria 228108
274 Ga0495635_0529060 3300046663 Bacteria 774
275 Ga0495599_0135306 3300046678 Bacteria 1530
276 Ga0495623_0009091 3300046679 Bacteria 6444
277 Ga0495623_0026980 3300046679 Bacteria 3695
278 Ga0495613_0074436 3300046689 Bacteria 2473
279 Ga0495600_0164002 3300046809 Bacteria 1435
280 Ga0495600_0546070 3300046809 Unclassified 708
281 Ga0495604_0000176 3300047317 Bacteria 56911
282 Ga0495674_0001054 3300047319 Bacteria 26513
283 Ga0495675_0004094 3300047444 Bacteria 8835
284 Ga0495684_0000750 3300047471 Bacteria 26139
285 Ga0495686_0195798 3300047472 Bacteria 1162
286 Ga0495602_0000362 3300048088 Bacteria 42468
287 Ga0495602_0072603 3300048088 Bacteria 2933
288 Ga0501034_0055277 3300049571 Bacteria 3995
289 Ga0501037_0022228 3300049573 Bacteria 4693
290 Ga0501038_0031555 3300049574 Bacteria 4682
291 Ga0501040_0233627 3300049576 Bacteria 1310
292 Ga0501042_0173898 3300049578 Bacteria 1554
293 Ga0501047_0171298 3300049581 Bacteria 2040
294 Ga0501070_0052689 3300049586 Bacteria 3377
295 Ga0501070_0075061 3300049586 Bacteria 2799
296 Ga0501074_0538759 3300049590 Bacteria 827
297 Ga0501074_0569465 3300049590 Bacteria 802
298 Ga0501080_0146370 3300049742 Bacteria 2184
299 Ga0501035_0505796 3300049822 Bacteria 994
300 Ga0501044_0004275 3300049823 Bacteria 16022
301 Ga0501044_0029774 3300049823 Bacteria 5756
302 Ga0501044_0066683 3300049823 Bacteria 3669
303 nmdc:mga05p37_106697_c1 3300050507 Bacteria 3446
304 nmdc:mga05p37_1144812_c1 3300050507 Archaea 810
305 nmdc:mga05p37_12994_c1 3300050507 Bacteria 9963
306 nmdc:mga05p37_14578_c1 3300050507 Bacteria 9439
307 nmdc:mga05p37_196235_c1 3300050507 Unclassified 2447
308 nmdc:mga05p37_19909_c1 3300050507 Bacteria 8117
309 nmdc:mga05p37_2626_c1 3300050507 Bacteria 20921
310 nmdc:mga05p37_4285_c1 3300050507 Bacteria 16662
311 nmdc:mga05p37_494286_c1 3300050507 Bacteria 1406
312 nmdc:mga09592_12752_c1 3300050508 Bacteria 6852
313 nmdc:mga09592_569068_c1 3300050508 Unclassified 972
314 nmdc:mga0qj67_223071_c1 3300050509 Bacteria 1530
315 nmdc:mga06r32_1149020_c1 3300050510 Unclassified 724
316 nmdc:mga06r32_278096_c1 3300050510 Bacteria 1661
317 nmdc:mga08y16_164342_c1 3300050511 Bacteria 2306
318 nmdc:mga08y16_32881_c1 3300050511 Bacteria 5452
319 nmdc:mga0n895_1081811_c1 3300050512 Bacteria 780
320 nmdc:mga0n895_23444_c1 3300050512 Bacteria 5800
321 nmdc:mga0n895_316320_c1 3300050512 Archaea 1582
322 nmdc:mga0n895_325559_c1 3300050512 Bacteria 1557
323 nmdc:mga0n895_32594_c1 3300050512 Bacteria 5002
324 nmdc:mga0n895_341781_c1 3300050512 Bacteria 1516
325 nmdc:mga0n895_8554_c1 3300050512 Bacteria 8872
326 nmdc:mga0rr50_114065_c1 3300050513 Unclassified 2142
327 nmdc:mga0rr50_404558_c1 3300050513 Bacteria 1153
328 nmdc:mga0rr50_429113_c1 3300050513 Bacteria 1119
329 nmdc:mga0rr50_522870_c1 3300050513 Unclassified 1009
330 nmdc:mga0rr50_81194_c1 3300050513 Bacteria 2501
331 nmdc:mga0rr50_854288_c1 3300050513 Unclassified 776
332 nmdc:mga0rr50_885469_c1 3300050513 Unclassified 761
333 nmdc:mga0a205_122750_c1 3300050515 Bacteria 2497
334 nmdc:mga0a205_12643_c1 3300050515 Bacteria 7817
335 nmdc:mga0a205_250_c1 3300050515 Bacteria 38459
336 nmdc:mga0a205_331861_c1 3300050515 Bacteria 1390
337 nmdc:mga0a205_4849_c1 3300050515 Bacteria 12095
338 nmdc:mga0a205_602446_c1 3300050515 Bacteria 952
339 Ga0500568_0027395 3300053139 Bacteria 2383
340 Ga0501084_0099666 3300054114 Bacteria 2440
341 Ga0501082_0064970 3300060353 Bacteria 3143
342 Ga0495680_0167475
343 LJNas_1000024
344 JGI25404J52841_10040726
345 JGI25405J52794_10002838
346 JGI25405J52794_10003381
347 Ga0058860_12225860
348 Ga0065715_10179610
349 Ga0070683_100061273
350 Ga0070690_100155254
351 Ga0070690_100308889
352 Ga0070666_10079392
353 Ga0070682_100432353
354 Ga0070660_100290001
355 Ga0070691_10304357
356 Ga0070661_100010537
357 Ga0070692_10414100
358 Ga0070671_100000183
359 Ga0070659_100026437
360 Ga0070703_10015882
361 Ga0070709_10452999
362 Ga0070711_100046522
363 Ga0070711_100543698
364 Ga0070705_100153023
365 Ga0070700_100228360
366 Ga0070708_100004232
367 Ga0070708_100004675
368 Ga0070708_100011196
369 Ga0070708_100024298
370 Ga0070708_100170368
371 Ga0070662_100309852
372 Ga0070681_10109854
373 Ga0070681_10431626
374 Ga0070681_11030883
375 Ga0070706_100002354
376 Ga0070706_100013144
377 Ga0070706_100091125
378 Ga0070707_100169577
379 Ga0070707_100219004
380 Ga0070707_100289732
381 Ga0070698_100000780
382 Ga0070698_100021810
383 Ga0070698_100165060
384 Ga0070698_100269205
385 Ga0070698_100365667
386 Ga0070699_100000881
387 Ga0070699_100001418
388 Ga0070699_100042282
389 Ga0070699_100422419
390 Ga0070679_100026414
391 Ga0070679_100037385
392 Ga0070679_100599515
393 Ga0070684_100165837
394 Ga0070684_100704605
395 Ga0070684_101062799
396 Ga0070697_100000668
397 Ga0070697_100012065
398 Ga0070697_100021839
399 Ga0070697_100394363
400 Ga0068853_100010649
401 Ga0070695_100160972
402 Ga0070695_100433850
403 Ga0070704_100131797
404 Ga0068855_100122095
405 Ga0068855_100188031
406 Ga0068855_100234751
407 Ga0068855_100284399
408 Ga0068854_100008428
409 Ga0068854_100301350
410 Ga0068856_100199482
411 Ga0068852_100111907
412 Ga0068852_100508310
413 Ga0068859_101329454
414 Ga0068864_100375802
415 Ga0068861_100114825
416 Ga0068863_100443259
417 Ga0068858_100455763
418 Ga0068858_100557185
419 Ga0081455_10002358
420 Ga0081540_1004360
421 Ga0070717_10023726
422 Ga0070717_10552657
423 Ga0070717_11231278
424 Ga0070716_100115947
425 Ga0070716_100126638
426 Ga0070716_100170707
427 Ga0070712_100021589
428 Ga0075427_10002461
429 Ga0075428_100011759
430 Ga0075428_100227413
431 Ga0075428_100821148
432 Ga0075431_100088299
433 Ga0075431_100180662
434 Ga0075431_101191367
435 Ga0075433_10000118
436 Ga0075433_10051372
437 Ga0075433_10106347
438 Ga0075433_10628871
439 Ga0075434_100174296
440 Ga0075434_100208327
441 Ga0075434_100209999
442 Ga0075434_100263829
443 Ga0075434_100303853
444 Ga0075434_101095270
445 Ga0075429_100010855
446 Ga0075436_100557203
447 Ga0097620_101329477
448 Ga0075435_100010027
449 Ga0075435_100428442
450 Ga0075435_100485829
451 Ga0075435_100950815
452 Ga0099794_10001467
453 Ga0099794_10007544
454 Ga0099794_10144997
455 Ga0099794_10217409
456 Ga0099795_10072597
457 Ga0099795_10121156
458 Ga0105240_10074566
459 Ga0105240_10364441
460 Ga0111539_10357158
461 Ga0111539_11351406
462 Ga0114129_10012845
463 Ga0114129_10022625
464 Ga0114129_10081999
465 Ga0114129_10144872
466 Ga0114129_10320667
467 Ga0114129_10403086
468 Ga0114129_10421530
469 Ga0114129_10480058
470 Ga0114129_10604572
471 Ga0105243_10470265
472 Ga0105241_10232735
473 Ga0105241_10291824
474 Ga0105242_10572666
475 Ga0105237_10004050
476 Ga0105238_10093270
477 Ga0105238_10193044
478 Ga0105238_10293709
479 Ga0105238_10520715
480 Ga0099796_10141706
481 Ga0099796_10161427
482 Ga0105239_10494992
483 Ga0157373_10814841
484 Ga0157371_10090823
485 Ga0157370_10015568
486 Ga0157370_10028580
487 Ga0157370_10130731
488 Ga0157370_10705809
489 Ga0157369_10011621
490 Ga0157369_10021042
491 Ga0157369_10024372
492 Ga0157369_10248869
493 Ga0157378_10267532
494 Ga0157378_10566362
495 Ga0163162_10559777
496 Ga0163162_10861364
497 Ga0157372_10066767
498 Ga0157372_10716504
499 Ga0157372_11261323
500 Ga0157379_10248063
501 Ga0157379_10272575
502 Ga0157376_10028794
503 Ga0213871_10007858
504 Ga0213871_10141818
505 Ga0224572_1011574
506 Ga0228598_1000110
507 Ga0207680_10147718
508 Ga0207647_10006296
509 Ga0207699_10067198
510 Ga0207699_10255248
511 Ga0207705_10000013
512 Ga0207705_10000645
513 Ga0207705_10022701
514 Ga0207705_10087821
515 Ga0207705_10214007
516 Ga0207684_10005155
517 Ga0207684_10015751
518 Ga0207684_10656353
519 Ga0207707_10031490
520 Ga0207707_10177175
521 Ga0207707_10809944
522 Ga0207695_10052289
523 Ga0207695_10052529
524 Ga0207695_10198189
525 Ga0207693_10011660
526 Ga0207663_10227758
527 Ga0207660_10132899
528 Ga0207660_10289504
529 Ga0207657_10001675
530 Ga0207657_10244000
531 Ga0207649_10051703
532 Ga0207652_10041819
533 Ga0207646_10001993
534 Ga0207646_10200877
535 Ga0207694_10214873
536 Ga0207650_10272094
537 Ga0207687_10682993
538 Ga0207644_10000120
539 Ga0207690_10216159
540 Ga0207709_10139185
541 Ga0207669_10979762
542 Ga0207704_10316007
543 Ga0207665_10009691
544 Ga0207665_10012955
545 Ga0207665_10017456
546 Ga0207665_10258977
547 Ga0207665_10452214
548 Ga0207711_10086849
549 Ga0207661_10314266
550 Ga0207661_10423688
551 Ga0207667_10020491
552 Ga0207667_10025265
553 Ga0207712_10131479
554 Ga0207640_10049918
555 Ga0207677_10505219
556 Ga0207703_10325398
557 Ga0207678_10001045
558 Ga0207678_10006884
559 Ga0207708_10159430
560 Ga0207641_10407057
561 Ga0207676_10247482
562 Ga0207674_10001390
563 Ga0207675_100135446
564 Ga0207698_10050062
565 Ga0209588_1000903
566 Ga0209588_1033760
567 Ga0209588_1045066
568 Ga0209588_1064345
569 Ga0207428_10278506
570 Ga0268265_10030923
571 Ga0268264_10282106
572 Ga0265338_10128157
573 Ga0265762_1000755
574 Ga0265762_1003285
575 Ga0265762_1024156
576 Ga0265760_10022255
577 Ga0265760_10033230
578 Ga0265325_10026819
579 Ga0265339_10283818
580 Ga0307508_10058946
581 Ga0265314_10076001
582 Ga0373926_0096657
583 Ga0373953_0005698
584 Ga0373954_0000189
585 Ga0373956_0002639
586 Ga0373956_0093971
587 Ga0373957_0007336
588 Ga0373957_0071477
589 Ga0373955_0000259
590 Ga0373924_0213991
591 Ga0373927_0023507
592 Ga0373933_0060915
593 Ga0373937_0000123
594 Ga0373937_0009215
595 Ga0242420_028312
596 Ga0436360_0102429
597 Ga0436360_0646686
598 Ga0436361_0918625
599 Ga0436362_0737467
600 Ga0439460_0024433
601 Ga0453683_0646024
602 Ga0451576_0188861
603 Ga0495592_0127229
604 Ga0495580_0006958
605 Ga0495664_0125259
606 Ga0495594_0169399
607 Ga0495606_0288209
608 Ga0495652_0050420
609 Ga0495640_0246070
610 Ga0495587_0000303
611 Ga0495587_0021153
612 Ga0495667_0007246
613 Ga0495667_0013274
614 Ga0495625_0000033
615 Ga0495635_0529060
616 Ga0495599_0135306
617 Ga0495623_0009091
618 Ga0495623_0026980
619 Ga0495613_0074436
620 Ga0495600_0164002
621 Ga0495600_0546070
622 Ga0495604_0000176
623 Ga0495674_0001054
624 Ga0495675_0004094
625 Ga0495684_0000750
626 Ga0495686_0195798
627 Ga0495602_0000362
628 Ga0495602_0072603
629 Ga0501034_0055277
630 Ga0501037_0022228
631 Ga0501038_0031555
632 Ga0501040_0233627
633 Ga0501042_0173898
634 Ga0501047_0171298
635 Ga0501070_0052689
636 Ga0501070_0075061
637 Ga0501074_0538759
638 Ga0501074_0569465
639 Ga0501080_0146370
640 Ga0501035_0505796
641 Ga0501044_0004275
642 Ga0501044_0029774
643 Ga0501044_0066683
644 nmdc:mga05p37_106697_c1
645 nmdc:mga05p37_1144812_c1
646 nmdc:mga05p37_12994_c1
647 nmdc:mga05p37_14578_c1
648 nmdc:mga05p37_196235_c1
649 nmdc:mga05p37_19909_c1
650 nmdc:mga05p37_2626_c1
651 nmdc:mga05p37_4285_c1
652 nmdc:mga05p37_494286_c1
653 nmdc:mga09592_12752_c1
654 nmdc:mga09592_569068_c1
655 nmdc:mga0qj67_223071_c1
656 nmdc:mga06r32_1149020_c1
657 nmdc:mga06r32_278096_c1
658 nmdc:mga08y16_164342_c1
659 nmdc:mga08y16_32881_c1
660 nmdc:mga0n895_1081811_c1
661 nmdc:mga0n895_23444_c1
662 nmdc:mga0n895_316320_c1
663 nmdc:mga0n895_325559_c1
664 nmdc:mga0n895_32594_c1
665 nmdc:mga0n895_341781_c1
666 nmdc:mga0n895_8554_c1
667 nmdc:mga0rr50_114065_c1
668 nmdc:mga0rr50_404558_c1
669 nmdc:mga0rr50_429113_c1
670 nmdc:mga0rr50_522870_c1
671 nmdc:mga0rr50_81194_c1
672 nmdc:mga0rr50_854288_c1
673 nmdc:mga0rr50_885469_c1
674 nmdc:mga0a205_122750_c1
675 nmdc:mga0a205_12643_c1
676 nmdc:mga0a205_250_c1
677 nmdc:mga0a205_331861_c1
678 nmdc:mga0a205_4849_c1
679 nmdc:mga0a205_602446_c1
680 Ga0500568_0027395
681 Ga0501084_0099666
682 Ga0501082_0064970

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00510

COX3

Cytochrome c oxidase subunit III

67

241

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cub-assembly1.cif.gz_C 2.55-angstrom cryo-em structure of cytochrome bo3 from escherichia coli in native membrane 0.949 23 197
8hcr-assembly1.cif.gz_S cryo-em structure of the mycobacterium tuberculosis cytochrome bcc:aa3 supercomplex and a novel inhibitor targeting subunit cytochrome ci 0.9056 18 196
7e1v-assembly1.cif.gz_G cryo-em structure of apo hybrid respiratory supercomplex consisting of mycobacterium tuberculosis complexiii and mycobacterium smegmatis complexiv 0.9009 15 196
7cub-assembly1.cif.gz_C 2.55-angstrom cryo-em structure of cytochrome bo3 from escherichia coli in native membrane 0.8992 23 197
7qhm-assembly1.cif.gz_S cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (stigmatellin and azide bound) 0.8944 16 196
ID Description Score Start End Superfamily
af_P9WP67_20_203_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.9275 16 196 1.20.120.80
af_P9WP67_20_203_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.9081 16 196 1.20.120.80
af_Q2FZK1_13_198_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.8954 23 197 1.20.120.80
2yevD03 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.8857 18 195 1.20.120.80
1fftH00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.8776 22 198 1.20.120.80
ID Description Score Start End GO Terms
AF-A0A2V7HUW9-F1-model_v4 Heme-copper oxidase subunit III 0.9935 17 198 GO:0004129
GO:0005886
GO:0019646
AF-A0A3N5GNS2-F1-model_v4 Heme-copper oxidase subunit III 0.9906 26 198 GO:0004129
GO:0005886
GO:0019646
AF-A0A2V7HUW9-F1-model_v4 Heme-copper oxidase subunit III 0.9881 17 198 GO:0004129
GO:0005886
GO:0019646
AF-A0A2V6HJC8-F1-model_v4 Heme-copper oxidase subunit III 0.9835 10 198 GO:0004129
GO:0005886
GO:0019646
AF-A0A4P5XKE2-F1-model_v4 Heme-copper oxidase subunit III family profile domain-containing protein 0.9827 79 198 GO:0004129
GO:0005886
GO:0019646

Map