F414281

General Info

Members Datasets Scaffolds Average Seq Length
340 273 680 321

Family's Representative Sequence

Representative Sequence 3300005983|Ga0081540_1046956|Ga0081540_10469562
Length 295
Sequence MAALGANLGIATTKFIAAGLTGSSSMLAEAIHSVADSGNQVLLLIGGRRAQREATEKHPFGYGRERYVYAFIVSVVLFTVGGLFAIYEGVHKLQNPEPIHSWQWVPVTVLVVSIGLEGFSFRTAVRESNPLRAGSGWAAFVRSARAPELPVVLLEDAAALVGLVLALFGVGLTLITGNGVWDGVGTLCIGVLLVVVAVILAIEMKSLLIGESATGDQVEAIQAALLGGPEVERVIHLRTLHLGPDELLVGAKIAVAHDETAQAVARAIDAAEARIRAAVPIARVIYLEPDIYRSG

Samples

Sample ID Description Type Environment
1 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
15 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
16 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
17 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
18 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
19 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
25 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
33 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
36 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
37 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
38 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
39 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
40 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
41 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
42 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
43 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
47 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
51 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
52 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
53 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
54 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
55 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
56 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
57 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
58 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
59 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
60 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
61 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
62 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
63 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
64 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
65 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
66 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
67 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
73 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
74 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
75 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
76 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
79 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
80 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
81 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
82 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
83 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
84 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
85 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
86 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
87 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
88 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
89 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
92 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
99 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
114 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
115 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
124 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
129 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
130 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
160 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
164 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
165 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
166 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
167 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
168 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
169 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
170 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
171 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
172 2643221548 Streptomyces sp. Root55 Isolate Unclassified
173 2643221572 Leifsonia sp. Root60 Isolate Unclassified
174 2643221578 Streptomyces sp. Root63 Isolate Unclassified
175 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
176 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
177 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
178 2643221647 Streptomyces sp. Root369 Isolate Unclassified
179 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
180 2643221670 Streptomyces sp. Root431 Isolate Unclassified
181 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
182 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
183 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
184 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
185 2643221714 Streptomyces sp. Root264 Isolate Unclassified
186 2687453737 Frankia sp. BMG5.36 Isolate Nodule
187 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
188 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
189 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
190 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
191 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
192 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
193 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
194 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
195 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
196 2808606448 Streptomyces sp. 193411 Isolate Unclassified
197 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
198 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
199 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
200 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
201 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
202 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
203 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
204 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
205 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
206 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
207 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
208 2862574272 Streptomyces sp. AcE210 Isolate Nodule
209 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
210 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
211 2867369537 Streptomyces sp. Z26 Isolate Unclassified
212 2867428634 Streptomyces sp. RP5T Isolate Unclassified
213 2867475112 Streptomyces sp. TM32 Isolate Unclassified
214 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
215 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
216 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
217 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
218 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
219 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
220 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
221 2891562705 Microbispora tritici MT50 Isolate Unclassified
222 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
223 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
224 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
225 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
226 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
227 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
228 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
229 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
230 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
231 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
232 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
233 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
234 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
235 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
236 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
237 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
238 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
239 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
240 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
241 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
242 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
243 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
244 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
245 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
246 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
247 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
248 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
249 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
250 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
251 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
252 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
253 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
254 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
255 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
256 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
257 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
258 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
259 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
260 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
261 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
262 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
263 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
264 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
265 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
266 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
267 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
268 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
269 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
270 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
271 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
272 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
273 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.94
Metatranscriptomes 0
Isolates 32.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.18
Nodule 1.18
Rhizoplane 2.94
Rhizosphere 68.24
Stem 0
Stem Tuber 0
Unclassified 0.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081540_1046956 3300005983 Bacteria 2176
2 rootH2_10005105 3300003320 Bacteria 3376
3 JGI25160J50197_1011360 3300003354 Bacteria 3164
4 Ga0055542_1000005 3300003762 Bacteria 550280
5 Ga0055529_1000302 3300003763 Bacteria 56770
6 Ga0070710_10003881 3300005437 Bacteria 7076
7 Ga0068853_100221297 3300005539 Bacteria 1729
8 Ga0068855_100065385 3300005563 Bacteria 4240
9 Ga0068858_100000082 3300005842 Bacteria 99205
10 Ga0081539_10002172 3300005985 Bacteria 28824
11 Ga0075367_10023553 3300006178 Bacteria 3465
12 Ga0114129_10025053 3300009147 Bacteria 8456
13 Ga0114129_10988351 3300009147 Bacteria 1061
14 Ga0105243_10001947 3300009148 Bacteria 17571
15 Ga0182008_10009433 3300014497 Bacteria 5265
16 Ga0157379_10000424 3300014968 Bacteria 34084
17 Ga0182007_10002589 3300015262 Bacteria 8903
18 Ga0182005_1021664 3300015265 Bacteria 1762
19 Ga0183367_1005 3300015688 Bacteria 652063
20 Ga0209672_100003 3300025228 Bacteria 1560476
21 Ga0209147_101137 3300025229 Bacteria 10924
22 Ga0209258_101816 3300025242 Bacteria 6533
23 Ga0209148_1000004 3300025254 Bacteria 1844481
24 Ga0209455_1000080 3300025272 Bacteria 266151
25 Ga0209455_1001284 3300025272 Bacteria 11725
26 Ga0207426_1002254 3300025302 Bacteria 12768
27 Ga0207426_1003505 3300025302 Bacteria 8452
28 Ga0207692_10005608 3300025898 Bacteria 5036
29 Ga0207710_10000012 3300025900 Bacteria 409603
30 Ga0207709_10003146 3300025935 Bacteria 9920
31 Ga0207667_10464852 3300025949 Bacteria 1285
32 Ga0207703_10000029 3300026035 Bacteria 199952
33 Ga0209371_1019105 3300027312 Bacteria 1717
34 Ga0268264_10013556 3300028381 Bacteria 6711
35 Ga0307517_10047647 3300028786 Bacteria 4435
36 Ga0307515_10000054 3300028794 Bacteria 265489
37 Ga0307515_10131893 3300028794 Bacteria 2745
38 Ga0265338_10000149 3300028800 Bacteria 127027
39 Ga0268256_1021451 3300030500 Bacteria 1717
40 Ga0307511_10008702 3300030521 Bacteria 10145
41 Ga0307511_10049147 3300030521 Bacteria 3420
42 Ga0307512_10025991 3300030522 Bacteria 5174
43 Ga0265320_10019384 3300031240 Unclassified 3720
44 Ga0265325_10013073 3300031241 Bacteria 4731
45 Ga0265339_10010498 3300031249 Bacteria 5751
46 Ga0265331_10048325 3300031250 Bacteria 2046
47 Ga0307513_10015636 3300031456 Bacteria 9185
48 Ga0307509_10058833 3300031507 Bacteria 4068
49 Ga0265313_10001213 3300031595 Bacteria 24627
50 Ga0307508_10003524 3300031616 Bacteria 15775
51 Ga0307508_10007224 3300031616 Bacteria 10340
52 Ga0307508_10192132 3300031616 Bacteria 1643
53 Ga0307514_10007674 3300031649 Bacteria 9284
54 Ga0307514_10034406 3300031649 Bacteria 4038
55 Ga0307516_10007605 3300031730 Bacteria 12418
56 Ga0307409_100080811 3300031995 Bacteria 2625
57 Ga0307416_100151326 3300032002 Bacteria 2128
58 Ga0307416_100495655 3300032002 Bacteria 1285
59 Ga0307510_10029265 3300033180 Bacteria 6273
60 Ga0307510_10056575 3300033180 Bacteria 4081
61 Ga0395899_0005275 3300037312 Bacteria 10033
62 Ga0395900_0039777 3300037418 Bacteria 4845
63 Ga0395901_0032232 3300038443 Bacteria 5408
64 Ga0400485_09161 3300038735 Bacteria 11371
65 Ga0439436_0020294 3300041404 Bacteria 1979
66 Ga0439436_0027957 3300041404 Bacteria 1647
67 Ga0439439_0003866 3300041406 Bacteria 3332
68 Ga0451791_0704966 3300041451 Bacteria 1541
69 Ga0451802_1605224 3300041460 Bacteria 1259
70 Ga0451837_1231972 3300041494 Bacteria 2712
71 Ga0451853_2510495 3300041512 Bacteria 3254
72 Ga0439433_0000353 3300041999 Bacteria 8139
73 Ga0439433_0004259 3300041999 Bacteria 3075
74 Ga0439442_005886 3300042002 Bacteria 2456
75 Ga0439449_0000470 3300042007 Bacteria 15054
76 Ga0439449_0039736 3300042007 Bacteria 1749
77 Ga0439457_000081 3300042014 Bacteria 21387
78 Ga0439457_000648 3300042014 Bacteria 10300
79 Ga0439462_0001570 3300042015 Bacteria 5130
80 Ga0450894_001092 3300042131 Bacteria 4097
81 Ga0466969_0088816 3300044656 Bacteria 1467
82 Ga0466972_0011106 3300044658 Bacteria 4520
83 Ga0466972_0025335 3300044658 Bacteria 2941
84 Ga0466966_0035921 3300044684 Bacteria 3201
85 Ga0466966_0056080 3300044684 Bacteria 2493
86 Ga0466966_0145113 3300044684 Bacteria 1449
87 Ga0466961_0045100 3300044693 Bacteria 2821
88 Ga0466961_0094096 3300044693 Bacteria 1891
89 Ga0466963_0148187 3300044694 Bacteria 1629
90 Ga0466971_0009229 3300044719 Bacteria 4310
91 Ga0466970_0002853 3300044765 Bacteria 8350
92 Ga0466957_0009623 3300044842 Bacteria 5520
93 Ga0466959_0017165 3300045049 Bacteria 5300
94 Ga0466959_0026480 3300045049 Bacteria 4298
95 Ga0466959_0043709 3300045049 Bacteria 3301
96 Ga0466958_0214357 3300045836 Bacteria 1227
97 Ga0495592_0056335 3300046454 Bacteria 2905
98 Ga0495603_0002475 3300046455 Bacteria 10861
99 Ga0495603_0013365 3300046455 Bacteria 4967
100 Ga0495603_0052333 3300046455 Bacteria 2424
101 Ga0495629_0004286 3300046459 Bacteria 10692
102 Ga0495629_0007173 3300046459 Bacteria 8210
103 Ga0495629_0069874 3300046459 Bacteria 2450
104 Ga0495629_0187760 3300046459 Bacteria 1431
105 Ga0495629_0324804 3300046459 Bacteria 1051
106 Ga0495638_0072575 3300046460 Bacteria 2103
107 Ga0495651_0001081 3300046462 Bacteria 21021
108 Ga0495651_0013016 3300046462 Bacteria 6427
109 Ga0495651_0081353 3300046462 Bacteria 2445
110 Ga0495653_0164641 3300046463 Bacteria 1536
111 Ga0495582_0011925 3300046473 Bacteria 4787
112 Ga0495605_0020520 3300046474 Bacteria 3510
113 Ga0495662_0010551 3300046476 Bacteria 4518
114 Ga0495662_0082072 3300046476 Bacteria 1568
115 Ga0495584_0041528 3300046491 Bacteria 2322
116 Ga0495594_0002488 3300046499 Bacteria 9597
117 Ga0495594_0032767 3300046499 Bacteria 2822
118 Ga0495596_0016766 3300046500 Bacteria 3040
119 Ga0495607_0033901 3300046501 Bacteria 3103
120 Ga0495606_0038786 3300046507 Bacteria 3218
121 Ga0495610_0010653 3300046512 Bacteria 5694
122 Ga0495616_0044092 3300046513 Bacteria 2263
123 Ga0495618_0044580 3300046514 Bacteria 2797
124 Ga0495628_0038058 3300046516 Bacteria 3853
125 Ga0495630_0024150 3300046517 Bacteria 4496
126 Ga0495631_0013276 3300046518 Bacteria 4000
127 Ga0495643_0005436 3300046522 Bacteria 8620
128 Ga0495666_0005346 3300046526 Bacteria 6475
129 Ga0495654_0009515 3300046530 Bacteria 5326
130 Ga0495640_0005160 3300046533 Bacteria 10385
131 Ga0495645_0002534 3300046543 Bacteria 12408
132 Ga0495622_0041943 3300046557 Bacteria 2128
133 Ga0495667_0114867 3300046559 Bacteria 1739
134 Ga0495634_0005460 3300046642 Bacteria 9776
135 Ga0495611_0014608 3300046648 Bacteria 3357
136 Ga0495625_0013162 3300046660 Bacteria 6665
137 Ga0495625_0037252 3300046660 Bacteria 3569
138 Ga0495625_0089764 3300046660 Bacteria 2127
139 Ga0495625_0113530 3300046660 Bacteria 1850
140 Ga0495625_0208857 3300046660 Bacteria 1284
141 Ga0495635_0002241 3300046663 Bacteria 13141
142 Ga0495659_0081497 3300046664 Bacteria 1229
143 Ga0495661_0028540 3300046665 Bacteria 3570
144 Ga0495588_0001237 3300046674 Bacteria 10989
145 Ga0495588_0006084 3300046674 Bacteria 5416
146 Ga0495657_0005687 3300046675 Bacteria 9821
147 Ga0495657_0025305 3300046675 Bacteria 4217
148 Ga0495657_0087880 3300046675 Bacteria 1999
149 Ga0495657_0243501 3300046675 Bacteria 1084
150 Ga0495658_0053227 3300046683 Bacteria 2298
151 Ga0495613_0001562 3300046689 Bacteria 17370
152 Ga0495613_0006967 3300046689 Bacteria 8428
153 Ga0495613_0024892 3300046689 Bacteria 4460
154 Ga0495671_0008263 3300046692 Bacteria 5867
155 Ga0495589_0007158 3300046794 Bacteria 5846
156 Ga0495589_0040361 3300046794 Bacteria 2330
157 Ga0495589_0052840 3300046794 Bacteria 2006
158 Ga0495581_0059785 3300047315 Bacteria 2202
159 Ga0495604_0001983 3300047317 Bacteria 16522
160 Ga0495604_0030878 3300047317 Bacteria 4251
161 Ga0495604_0055083 3300047317 Bacteria 3066
162 Ga0495672_0055175 3300047320 Bacteria 2320
163 Ga0495676_0009063 3300047321 Bacteria 9079
164 Ga0495676_0014622 3300047321 Bacteria 7018
165 Ga0495676_0015340 3300047321 Bacteria 6825
166 Ga0495676_0020501 3300047321 Bacteria 5797
167 Ga0495676_0022801 3300047321 Bacteria 5441
168 Ga0495683_0000749 3300047323 Bacteria 23481
169 Ga0495687_032906 3300047443 Bacteria 2360
170 Ga0495687_075323 3300047443 Bacteria 1339
171 Ga0495675_0024455 3300047444 Bacteria 3850
172 Ga0495675_0063756 3300047444 Bacteria 2331
173 Ga0495685_001951 3300047447 Bacteria 6392
174 Ga0495685_004960 3300047447 Bacteria 4327
175 Ga0495685_015663 3300047447 Bacteria 2589
176 Ga0495681_0012547 3300047470 Bacteria 4973
177 Ga0495684_0163486 3300047471 Bacteria 1659
178 Ga0495686_0036066 3300047472 Bacteria 3174
179 Ga0495686_0058968 3300047472 Bacteria 2391
180 Ga0495593_0001024 3300047673 Bacteria 16389
181 Ga0495593_0116302 3300047673 Bacteria 1363
182 Ga0495602_0088210 3300048088 Bacteria 2583
183 Ga0495614_0001587 3300048089 Bacteria 9866
184 Ga0495614_0050010 3300048089 Bacteria 1791
185 Ga0495626_0021113 3300048091 Bacteria 3235
186 Ga0496100_0064563 3300048903 Bacteria 2423
187 Ga0496102_0032668 3300048905 Bacteria 4676
188 Ga0496105_0059733 3300048908 Bacteria 3146
189 Ga0496106_0027011 3300048909 Bacteria 4274
190 Ga0496108_0157731 3300048911 Bacteria 1960
191 Ga0496114_0001896 3300048917 Bacteria 15895
192 Ga0496114_0036476 3300048917 Bacteria 4065
193 Ga0496117_0028753 3300048920 Bacteria 4299
194 Ga0496118_0001540 3300048921 Bacteria 34277
195 Ga0496119_0007701 3300048922 Bacteria 9637
196 Ga0496121_0029379 3300048924 Bacteria 5084
197 Ga0501033_0051108 3300049570 Bacteria 3064
198 Ga0501034_0029186 3300049571 Bacteria 5607
199 Ga0501034_0037496 3300049571 Bacteria 4909
200 Ga0501036_0049519 3300049572 Bacteria 3557
201 Ga0501037_0095894 3300049573 Bacteria 2144
202 Ga0501038_0043538 3300049574 Bacteria 3903
203 Ga0501042_0022969 3300049578 Bacteria 4358
204 Ga0501043_0024797 3300049579 Bacteria 4705
205 Ga0501046_0028061 3300049580 Bacteria 4587
206 Ga0501046_0150399 3300049580 Bacteria 1756
207 Ga0501047_0033613 3300049581 Bacteria 4949
208 Ga0501047_0050691 3300049581 Bacteria 4009
209 Ga0501047_0096884 3300049581 Bacteria 2828
210 Ga0501048_0065986 3300049582 Bacteria 2559
211 Ga0501070_0038540 3300049586 Bacteria 3987
212 Ga0501070_0082549 3300049586 Bacteria 2660
213 Ga0501070_0257385 3300049586 Bacteria 1427
214 Ga0501074_0069345 3300049590 Bacteria 2535
215 Ga0501035_0062737 3300049822 Bacteria 3307
216 Ga0501035_0100349 3300049822 Bacteria 2541
217 Ga0501044_0002444 3300049823 Bacteria 21189
218 Ga0501044_0003164 3300049823 Bacteria 18600
219 nmdc:mga06z11_14645_c1 3300050494 Bacteria 3480
220 nmdc:mga05p37_346402_c1 3300050507 Bacteria 1750
221 nmdc:mga09592_24061_c1 3300050508 Bacteria 5034
222 nmdc:mga06r32_179798_c1 3300050510 Bacteria 2100
223 Ga0500560_010906 3300053107 Bacteria 2296
224 Ga0500572_019018 3300053111 Bacteria 1788
225 Ga0500568_0010214 3300053139 Bacteria 4408
226 Ga0500573_0064164 3300053140 Bacteria 2101
227 Ga0500573_0121200 3300053140 Bacteria 1456
228 Ga0500573_0147956 3300053140 Bacteria 1288
229 Ga0500573_0157121 3300053140 Bacteria 1240
230 Ga0500577_0068149 3300053142 Bacteria 1388
231 Ga0466962_0013376 3300061719 Bacteria 3950
232 2547412922 2547132111 Bacteria 8013147
233 2554258215 2554235005 Bacteria 6457341
234 2585302470 2582581312 Bacteria 7308206
235 2585310329 2582581313 Bacteria 10042643
236 2585319724 2582581314 Bacteria 11452267
237 2616695476 2616644814 Bacteria 11555299
238 2616905038 2616644941 Bacteria 8510691
239 2643765540 2643221548 Bacteria 8053412
240 2643877399 2643221572 Bacteria 3614809
241 2643898702 2643221578 Bacteria 9213798
242 2643945569 2643221587 Bacteria 7586415
243 2644181394 2643221632 Bacteria 3406696
244 2644197782 2643221635 Bacteria 2632343
245 2644265228 2643221647 Bacteria 10741251
246 2644384454 2643221669 Bacteria 3611286
247 2644388958 2643221670 Bacteria 6497041
248 2644402858 2643221673 Bacteria 9196637
249 2644432415 2643221677 Bacteria 7584031
250 2644436824 2643221678 Bacteria 9540101
251 2644459653 2643221682 Bacteria 6743283
252 2644628562 2643221714 Bacteria 9015452
253 2689956349 2687453737 Bacteria 11203906
254 2738887228 2738541308 Bacteria 7020677
255 2739236577 2738543011 Bacteria 5731169
256 2768646583 2767802112 Bacteria 6465194
257 2784588293 2784132148 Bacteria 8627943
258 2785343721 2784746763 Bacteria 9783172
259 2785369105 2784746768 Bacteria 10036182
260 2786670251 2786546132 Bacteria 10419719
261 2804847430 2802429296 Bacteria 7227771
262 2808841720 2808606359 Bacteria 9866990
263 2809231907 2808606448 Bacteria 8656184
264 2811848654 2808606982 Bacteria 7791042
265 2812358532 2811994879 Bacteria 9313447
266 2812480856 2811994917 Bacteria 7761064
267 2819697780 2818991463 Bacteria 7948711
268 2852637024 2852635781 Bacteria 8251373
269 2852643669 2852643534 Bacteria 3013378
270 2862184394 2862178590 Bacteria 8583590
271 2862285148 2862281513 Bacteria 9621493
272 2862294293 2862290372 Bacteria 7471434
273 2862384547 2862382967 Bacteria 10317375
274 2862509698 2862507626 Bacteria 9425308
275 2862579543 2862574272 Bacteria 10567477
276 2862708283 2862705112 Bacteria 6563286
277 2863405053 2863404153 Bacteria 9672205
278 2867371591 2867369537 Bacteria 6501581
279 2867435191 2867428634 Bacteria 9590268
280 2867475267 2867475112 Bacteria 6909112
281 2870625021 2870622029 Bacteria 3643329
282 2873156098 2873151551 Bacteria 8625867
283 2873321875 2873314349 Bacteria 8512634
284 2875394205 2875391855 Bacteria 7600475
285 2877681439 2877676314 Bacteria 9512378
286 2889306064 2889300758 Bacteria 5690814
287 2891555134 2891554331 Bacteria 8812224
288 2891566767 2891562705 Bacteria 8039471
289 2895661788 2895660088 Bacteria 3782833
290 2904434063 2904430863 Bacteria 3486923
291 2912720419 2912715099 Bacteria 9460473
292 2912760334 2912757875 Bacteria 7940295
293 2918504191 2918501144 Bacteria 8668083
294 2919475261 2919468124 Bacteria 9133025
295 2919526608 2919523602 Bacteria 3788128
296 2935395094 2935390628 Bacteria 7043367
297 2939664321 2939660829 Bacteria 3784848
298 2939744194 2939743619 Bacteria 5762299
299 2946050394 2946045630 Bacteria 8527308
300 2946067345 2946064051 Bacteria 8957905
301 2947229894 2947224130 Bacteria 9938529
302 2954007876 2954002825 Bacteria 9173742
303 2954386584 2954380949 Bacteria 10050426
304 2954676593 2954673503 Bacteria 9685905
305 2954687574 2954682443 Bacteria 9862841
306 2954704874 2954701450 Bacteria 10834262
307 2954716562 2954711539 Bacteria 10867210
308 2954726507 2954721474 Bacteria 10456478
309 2954735300 2954731030 Bacteria 10243860
310 2954754156 2954749733 Bacteria 10366972
311 2954764406 2954759201 Bacteria 9358192
312 2966602872 2966598605 Bacteria 7676064
313 2990048436 2990044586 Bacteria 6603797
314 2990067520 2990059506 Bacteria 9321252
315 2990089191 2990088156 Bacteria 6657676
316 2997454449 2997451912 Bacteria 8492419
317 2997604058 2997600082 Bacteria 9896405
318 3006393664 3006393351 Bacteria 6615579
319 3006426972 3006425503 Bacteria 6491253
320 3006486491 3006486233 Bacteria 8157040
321 3006499780 3006493962 Bacteria 8825450
322 8008491257 8008485437 Bacteria 7198341
323 8008567976 8008558824 Bacteria 10610750
324 8023631145 8023623736 Bacteria 8593882
325 8025416855 8025413630 Bacteria 7014048
326 8025482125 8025478263 Bacteria 8209203
327 8025530586 8025524527 Bacteria 7197316
328 8025536799 8025530807 Bacteria 8495698
329 8033689886 8033684223 Bacteria 6906479
330 8047898389 8047893842 Bacteria 11723082
331 8048360505 8048356638 Bacteria 11044339
332 8048375352 8048369669 Bacteria 11666822
333 8048382853 8048379754 Bacteria 11877923
334 8048408220 8048406513 Bacteria 8936924
335 8054162515 8054160619 Bacteria 7783213
336 8055037290 8055034563 Bacteria 3562128
337 8055039546 8055037949 Bacteria 3337834
338 8055071523 8055066027 Bacteria 9479577
339 8055174871 8055172936 Bacteria 9305943
340 8056671481 8056667051 Bacteria 6953971
341 Ga0081540_1046956
342 rootH2_10005105
343 JGI25160J50197_1011360
344 Ga0055542_1000005
345 Ga0055529_1000302
346 Ga0070710_10003881
347 Ga0068853_100221297
348 Ga0068855_100065385
349 Ga0068858_100000082
350 Ga0081539_10002172
351 Ga0075367_10023553
352 Ga0114129_10025053
353 Ga0114129_10988351
354 Ga0105243_10001947
355 Ga0182008_10009433
356 Ga0157379_10000424
357 Ga0182007_10002589
358 Ga0182005_1021664
359 Ga0183367_1005
360 Ga0209672_100003
361 Ga0209147_101137
362 Ga0209258_101816
363 Ga0209148_1000004
364 Ga0209455_1000080
365 Ga0209455_1001284
366 Ga0207426_1002254
367 Ga0207426_1003505
368 Ga0207692_10005608
369 Ga0207710_10000012
370 Ga0207709_10003146
371 Ga0207667_10464852
372 Ga0207703_10000029
373 Ga0209371_1019105
374 Ga0268264_10013556
375 Ga0307517_10047647
376 Ga0307515_10000054
377 Ga0307515_10131893
378 Ga0265338_10000149
379 Ga0268256_1021451
380 Ga0307511_10008702
381 Ga0307511_10049147
382 Ga0307512_10025991
383 Ga0265320_10019384
384 Ga0265325_10013073
385 Ga0265339_10010498
386 Ga0265331_10048325
387 Ga0307513_10015636
388 Ga0307509_10058833
389 Ga0265313_10001213
390 Ga0307508_10003524
391 Ga0307508_10007224
392 Ga0307508_10192132
393 Ga0307514_10007674
394 Ga0307514_10034406
395 Ga0307516_10007605
396 Ga0307409_100080811
397 Ga0307416_100151326
398 Ga0307416_100495655
399 Ga0307510_10029265
400 Ga0307510_10056575
401 Ga0395899_0005275
402 Ga0395900_0039777
403 Ga0395901_0032232
404 Ga0400485_09161
405 Ga0439436_0020294
406 Ga0439436_0027957
407 Ga0439439_0003866
408 Ga0451791_0704966
409 Ga0451802_1605224
410 Ga0451837_1231972
411 Ga0451853_2510495
412 Ga0439433_0000353
413 Ga0439433_0004259
414 Ga0439442_005886
415 Ga0439449_0000470
416 Ga0439449_0039736
417 Ga0439457_000081
418 Ga0439457_000648
419 Ga0439462_0001570
420 Ga0450894_001092
421 Ga0466969_0088816
422 Ga0466972_0011106
423 Ga0466972_0025335
424 Ga0466966_0035921
425 Ga0466966_0056080
426 Ga0466966_0145113
427 Ga0466961_0045100
428 Ga0466961_0094096
429 Ga0466963_0148187
430 Ga0466971_0009229
431 Ga0466970_0002853
432 Ga0466957_0009623
433 Ga0466959_0017165
434 Ga0466959_0026480
435 Ga0466959_0043709
436 Ga0466958_0214357
437 Ga0495592_0056335
438 Ga0495603_0002475
439 Ga0495603_0013365
440 Ga0495603_0052333
441 Ga0495629_0004286
442 Ga0495629_0007173
443 Ga0495629_0069874
444 Ga0495629_0187760
445 Ga0495629_0324804
446 Ga0495638_0072575
447 Ga0495651_0001081
448 Ga0495651_0013016
449 Ga0495651_0081353
450 Ga0495653_0164641
451 Ga0495582_0011925
452 Ga0495605_0020520
453 Ga0495662_0010551
454 Ga0495662_0082072
455 Ga0495584_0041528
456 Ga0495594_0002488
457 Ga0495594_0032767
458 Ga0495596_0016766
459 Ga0495607_0033901
460 Ga0495606_0038786
461 Ga0495610_0010653
462 Ga0495616_0044092
463 Ga0495618_0044580
464 Ga0495628_0038058
465 Ga0495630_0024150
466 Ga0495631_0013276
467 Ga0495643_0005436
468 Ga0495666_0005346
469 Ga0495654_0009515
470 Ga0495640_0005160
471 Ga0495645_0002534
472 Ga0495622_0041943
473 Ga0495667_0114867
474 Ga0495634_0005460
475 Ga0495611_0014608
476 Ga0495625_0013162
477 Ga0495625_0037252
478 Ga0495625_0089764
479 Ga0495625_0113530
480 Ga0495625_0208857
481 Ga0495635_0002241
482 Ga0495659_0081497
483 Ga0495661_0028540
484 Ga0495588_0001237
485 Ga0495588_0006084
486 Ga0495657_0005687
487 Ga0495657_0025305
488 Ga0495657_0087880
489 Ga0495657_0243501
490 Ga0495658_0053227
491 Ga0495613_0001562
492 Ga0495613_0006967
493 Ga0495613_0024892
494 Ga0495671_0008263
495 Ga0495589_0007158
496 Ga0495589_0040361
497 Ga0495589_0052840
498 Ga0495581_0059785
499 Ga0495604_0001983
500 Ga0495604_0030878
501 Ga0495604_0055083
502 Ga0495672_0055175
503 Ga0495676_0009063
504 Ga0495676_0014622
505 Ga0495676_0015340
506 Ga0495676_0020501
507 Ga0495676_0022801
508 Ga0495683_0000749
509 Ga0495687_032906
510 Ga0495687_075323
511 Ga0495675_0024455
512 Ga0495675_0063756
513 Ga0495685_001951
514 Ga0495685_004960
515 Ga0495685_015663
516 Ga0495681_0012547
517 Ga0495684_0163486
518 Ga0495686_0036066
519 Ga0495686_0058968
520 Ga0495593_0001024
521 Ga0495593_0116302
522 Ga0495602_0088210
523 Ga0495614_0001587
524 Ga0495614_0050010
525 Ga0495626_0021113
526 Ga0496100_0064563
527 Ga0496102_0032668
528 Ga0496105_0059733
529 Ga0496106_0027011
530 Ga0496108_0157731
531 Ga0496114_0001896
532 Ga0496114_0036476
533 Ga0496117_0028753
534 Ga0496118_0001540
535 Ga0496119_0007701
536 Ga0496121_0029379
537 Ga0501033_0051108
538 Ga0501034_0029186
539 Ga0501034_0037496
540 Ga0501036_0049519
541 Ga0501037_0095894
542 Ga0501038_0043538
543 Ga0501042_0022969
544 Ga0501043_0024797
545 Ga0501046_0028061
546 Ga0501046_0150399
547 Ga0501047_0033613
548 Ga0501047_0050691
549 Ga0501047_0096884
550 Ga0501048_0065986
551 Ga0501070_0038540
552 Ga0501070_0082549
553 Ga0501070_0257385
554 Ga0501074_0069345
555 Ga0501035_0062737
556 Ga0501035_0100349
557 Ga0501044_0002444
558 Ga0501044_0003164
559 nmdc:mga06z11_14645_c1
560 nmdc:mga05p37_346402_c1
561 nmdc:mga09592_24061_c1
562 nmdc:mga06r32_179798_c1
563 Ga0500560_010906
564 Ga0500572_019018
565 Ga0500568_0010214
566 Ga0500573_0064164
567 Ga0500573_0121200
568 Ga0500573_0147956
569 Ga0500573_0157121
570 Ga0500577_0068149
571 Ga0466962_0013376
572 2547412922
573 2554258215
574 2585302470
575 2585310329
576 2585319724
577 2616695476
578 2616905038
579 2643765540
580 2643877399
581 2643898702
582 2643945569
583 2644181394
584 2644197782
585 2644265228
586 2644384454
587 2644388958
588 2644402858
589 2644432415
590 2644436824
591 2644459653
592 2644628562
593 2689956349
594 2738887228
595 2739236577
596 2768646583
597 2784588293
598 2785343721
599 2785369105
600 2786670251
601 2804847430
602 2808841720
603 2809231907
604 2811848654
605 2812358532
606 2812480856
607 2819697780
608 2852637024
609 2852643669
610 2862184394
611 2862285148
612 2862294293
613 2862384547
614 2862509698
615 2862579543
616 2862708283
617 2863405053
618 2867371591
619 2867435191
620 2867475267
621 2870625021
622 2873156098
623 2873321875
624 2875394205
625 2877681439
626 2889306064
627 2891555134
628 2891566767
629 2895661788
630 2904434063
631 2912720419
632 2912760334
633 2918504191
634 2919475261
635 2919526608
636 2935395094
637 2939664321
638 2939744194
639 2946050394
640 2946067345
641 2947229894
642 2954007876
643 2954386584
644 2954676593
645 2954687574
646 2954704874
647 2954716562
648 2954726507
649 2954735300
650 2954754156
651 2954764406
652 2966602872
653 2990048436
654 2990067520
655 2990089191
656 2997454449
657 2997604058
658 3006393664
659 3006426972
660 3006486491
661 3006499780
662 8008491257
663 8008567976
664 8023631145
665 8025416855
666 8025482125
667 8025530586
668 8025536799
669 8033689886
670 8047898389
671 8048360505
672 8048375352
673 8048382853
674 8048408220
675 8054162515
676 8055037290
677 8055039546
678 8055071523
679 8055174871
680 8056671481

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01545

Cation_efflux

Cation efflux family

1

209

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hsp-assembly1.cif.gz_A-2 mamm ctd m250l 0.9254 223 299
3w63-assembly1.cif.gz_A-2 mamm-ctd 215-293 0.9199 223 299
6han-assembly2.cif.gz_B mamm ctd h264e-e289h 0.9193 223 300
3w62-assembly1.cif.gz_A-2 mamm-ctd e289a 0.9177 223 299
6h5v-assembly1.cif.gz_A mamm ctd h264e 0.9166 223 300
ID Description Score Start End Superfamily
af_Q3V5J4_162_375_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.9363 7 213 1.20.1510.10
af_D3ZWW5_236_448_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.9297 8 213 1.20.1510.10
3w5yA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9108 223 300 3.30.70.1350
af_Q10LJ2_305_379_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9102 223 297 3.30.70.1350
af_P9WGF5_239_328_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9099 220 301 3.30.70.1350
ID Description Score Start End GO Terms
AF-A0A6J6TYY2-F1-model_v4 Unannotated protein 0.9625 216 302
AF-A0A7W1BLK8-F1-model_v4 Cation diffusion facilitator family transporter 0.9496 58 298 GO:0006829
GO:0008324
GO:0016020
AF-A0A7U1HVX1-F1-model_v4 deleted 0.9353 229 298
AF-A0A6P0JXF0-F1-model_v4 Cation transporter 0.9302 70 301 GO:0006829
GO:0008324
GO:0016020
AF-S5TA99-F1-model_v4 Cation transporter 0.9299 37 301 GO:0006826
GO:0006829
GO:0008324
GO:0016020

Map