F413360

General Info

Members Datasets Scaffolds Average Seq Length
338 307 676 252

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100000962|Ga0070683_10000096220
Length 292
Sequence MDRRPVTIAKARKGRPPRAAIQMSGQKRMGGEIALITGAAGALGQAVAQRLGGEGASLVLADTASAALEQLTASLRSKKMSLLAVEADVSRESDVERLIDAGRERFGHISMLFNNAGIEGDSAALWDYSAAAFDEVLAVNLRGTFLVLKHALLHMRSMQRGSIVNSASTSGLIGNPDACAYVASKHAVIGLTRAAAAEAGRFGIRVNCVAPGPLQSPMMERFEHRERSRAAAVRGWYEANTPLGRYGELDEAAALVAFLLSDDASFVTGATFTCDGGLTATGRPAQRSNTNP

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
50 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
89 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
90 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
97 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
98 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
99 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
102 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
103 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
104 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
112 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
129 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
130 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
131 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
132 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
133 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
134 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
135 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
136 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
137 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
138 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
139 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
140 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
141 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
142 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
143 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
147 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
148 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
149 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
150 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
151 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
152 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
153 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
154 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
155 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
156 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
157 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
158 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
159 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
160 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
161 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
162 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
163 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
164 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
165 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
166 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
167 2519899620 Rhizobium sp. Pop5 Isolate Nodule
168 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
169 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
170 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
171 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
172 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
173 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
174 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
175 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
176 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
177 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
178 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
179 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
180 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
181 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
182 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
183 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
184 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
185 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
186 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
187 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
188 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
189 2643221599 Rhizobium sp. Root708 Isolate Unclassified
190 2643221607 Rhizobium sp. Root73 Isolate Unclassified
191 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
192 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
193 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
194 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
195 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
196 2718217882 Rhizobium sp. N741 Isolate Nodule
197 2718218009 Rhizobium sp. N561 Isolate Nodule
198 2718218363 Rhizobium sp. N113 Isolate Nodule
199 2718218365 Rhizobium sp. N731 Isolate Nodule
200 2718218366 Rhizobium sp. N621 Isolate Nodule
201 2721755514 Rhizobium sp. N6212 Isolate Nodule
202 2721755810 Rhizobium sp. N871 Isolate Nodule
203 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
204 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
205 2728369365 Rhizobium sp. N1341 Isolate Nodule
206 2728369397 Rhizobium sp. N1314 Isolate Nodule
207 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
208 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
209 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
210 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
211 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
212 2791355263 Rhizobium chutanense C5 Isolate Nodule
213 2791355264 Rhizobium sp. S9 Isolate Nodule
214 2791355266 Rhizobium sp. L43 Isolate Nodule
215 2791355267 Rhizobium sp. L18 Isolate Nodule
216 2802429633 Rhizobium anhuiense J3 Isolate Nodule
217 2802429634 Rhizobium anhuiense S10 Isolate Nodule
218 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
219 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
220 2802429637 Rhizobium anhuiense C15 Isolate Nodule
221 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
222 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
223 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
224 2831864461 Roseateles noduli HZ7 Isolate Nodule
225 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
226 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
227 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
228 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
229 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
230 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
231 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
232 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
233 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
234 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
235 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
236 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
237 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
238 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
239 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
240 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
241 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
242 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
243 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
244 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
245 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
246 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
247 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
248 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
249 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
250 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
251 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
252 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
253 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
254 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
255 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
256 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
257 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
258 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
259 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
260 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
261 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
262 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
263 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
264 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
265 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
266 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
267 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
268 2904424332 Duganella sp. 1411 Isolate Rhizosphere
269 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
270 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
271 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
272 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
273 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
274 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
275 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
276 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
277 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
278 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
279 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
280 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
281 2996887358 Rhizobium sp. R711 Isolate Nodule
282 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
283 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
284 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
285 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
286 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
287 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
288 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
289 8005258706 Rhizobium sp. R693 Isolate Nodule
290 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
291 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
292 8005321885 Rhizobium sp. R72 Isolate Nodule
293 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
294 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
295 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
296 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
297 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
298 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
299 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
300 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
301 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
302 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
303 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
304 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
305 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
306 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
307 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 52.07
Metatranscriptomes 0
Isolates 47.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.28
Nodule 30.77
Rhizoplane 0.89
Rhizosphere 47.63
Stem 0
Stem Tuber 0
Unclassified 0.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100000962 3300005329 Bacteria 21403
2 JGI24740J21852_10056945 3300001979 Bacteria 1093
3 JGI25158J39367_1000011 3300002739 Bacteria 50391
4 JGI25152J39213_1003078 3300002773 Bacteria 5853
5 JGI25152J39213_1003698 3300002773 Bacteria 5132
6 JGI25151J46595_10010867 3300003187 Bacteria 4212
7 JGI25153J46596_10001273 3300003215 Bacteria 15147
8 JGI25153J46596_10010409 3300003215 Bacteria 4208
9 rootH2_10089074 3300003320 Bacteria 7736
10 JGI25160J50197_1024404 3300003354 Bacteria 1716
11 Ga0055542_1016046 3300003762 Bacteria 1189
12 Ga0065707_10089003 3300005295 Bacteria 4491
13 Ga0070658_10004422 3300005327 Bacteria 11448
14 Ga0070683_100033328 3300005329 Bacteria 4697
15 Ga0070660_100044558 3300005339 Bacteria 3394
16 Ga0070709_10090259 3300005434 Bacteria 2019
17 Ga0070714_100022339 3300005435 Bacteria 5187
18 Ga0070710_10040576 3300005437 Bacteria 2566
19 Ga0070711_100018384 3300005439 Bacteria 4462
20 Ga0070681_10017585 3300005458 Bacteria 7144
21 Ga0070698_100122297 3300005471 Bacteria 2561
22 Ga0070679_100002842 3300005530 Bacteria 15733
23 Ga0070684_100000297 3300005535 Bacteria 34479
24 Ga0070684_100076304 3300005535 Bacteria 2958
25 Ga0068855_100006535 3300005563 Bacteria 14177
26 Ga0068855_100271672 3300005563 Bacteria 1885
27 Ga0070664_100011827 3300005564 Bacteria 7084
28 Ga0068854_100239829 3300005578 Bacteria 1443
29 Ga0068856_100000581 3300005614 Bacteria 39928
30 Ga0068856_100546914 3300005614 Bacteria 1179
31 Ga0068859_100253172 3300005617 Bacteria 1851
32 Ga0068861_100001232 3300005719 Bacteria 15930
33 Ga0068861_100064213 3300005719 Bacteria 2824
34 Ga0068863_100294613 3300005841 Bacteria 1573
35 Ga0068860_100141220 3300005843 Bacteria 2315
36 Ga0081455_10000485 3300005937 Bacteria 51572
37 Ga0081538_10000643 3300005981 Bacteria 38673
38 Ga0081540_1029154 3300005983 Bacteria 3082
39 Ga0081539_10044266 3300005985 Bacteria 2571
40 Ga0070715_10037225 3300006163 Bacteria 2012
41 Ga0070712_100018795 3300006175 Bacteria 4495
42 Ga0075369_10030743 3300006186 Bacteria 2263
43 Ga0075430_100234248 3300006846 Bacteria 1522
44 Ga0075433_10217244 3300006852 Bacteria 1699
45 Ga0075434_100245185 3300006871 Bacteria 1811
46 Ga0075429_100332250 3300006880 Bacteria 1330
47 Ga0105240_10020790 3300009093 Bacteria 8743
48 Ga0105240_10535375 3300009093 Bacteria 1298
49 Ga0105247_10122583 3300009101 Bacteria 1686
50 Ga0114129_10337113 3300009147 Bacteria 2001
51 Ga0105249_10051115 3300009553 Bacteria 3769
52 Ga0105239_10015382 3300010375 Bacteria 8477
53 Ga0105239_10366812 3300010375 Bacteria 1627
54 Ga0105246_10426644 3300011119 Bacteria 1108
55 Ga0157369_10002919 3300013105 Bacteria 20442
56 Ga0157380_10019361 3300014326 Bacteria 5072
57 Ga0213872_10032000 3300021361 Bacteria 2411
58 Ga0209025_1031124 3300025294 Bacteria 2533
59 Ga0209564_1002105 3300025295 Bacteria 16970
60 Ga0207692_10013361 3300025898 Bacteria 3560
61 Ga0207710_10127142 3300025900 Bacteria 1222
62 Ga0207685_10003888 3300025905 Bacteria 3705
63 Ga0207699_10052187 3300025906 Bacteria 2419
64 Ga0207705_10018310 3300025909 Bacteria 5008
65 Ga0207707_10039270 3300025912 Bacteria 4138
66 Ga0207695_10002782 3300025913 Bacteria 25458
67 Ga0207695_10019361 3300025913 Bacteria 7838
68 Ga0207693_10094428 3300025915 Bacteria 2344
69 Ga0207663_10031541 3300025916 Bacteria 3138
70 Ga0207657_10014713 3300025919 Bacteria 7620
71 Ga0207649_10131691 3300025920 Bacteria 1700
72 Ga0207700_10062563 3300025928 Bacteria 2827
73 Ga0207664_10260268 3300025929 Bacteria 1517
74 Ga0207665_10011136 3300025939 Bacteria 5901
75 Ga0207661_10000892 3300025944 Bacteria 19597
76 Ga0207661_10022919 3300025944 Bacteria 4711
77 Ga0207679_10195515 3300025945 Bacteria 1685
78 Ga0207667_10103264 3300025949 Bacteria 2940
79 Ga0207667_10196782 3300025949 Bacteria 2068
80 Ga0207712_10021797 3300025961 Bacteria 4210
81 Ga0207640_10204611 3300025981 Bacteria 1499
82 Ga0207703_10335514 3300026035 Bacteria 1388
83 Ga0207678_10345165 3300026067 Bacteria 1283
84 Ga0207702_10001738 3300026078 Bacteria 21439
85 Ga0207702_10981165 3300026078 Bacteria 838
86 Ga0207648_10296462 3300026089 Bacteria 1449
87 Ga0207674_10554054 3300026116 Bacteria 1111
88 Ga0207675_100001309 3300026118 Bacteria 24933
89 Ga0207675_100093482 3300026118 Bacteria 2828
90 Ga0209813_10012800 3300027866 Bacteria 2226
91 Ga0307515_10004389 3300028794 Bacteria 29220
92 Ga0307515_10021080 3300028794 Bacteria 11574
93 Ga0307513_10044072 3300031456 Bacteria 4890
94 Ga0307412_10324437 3300031911 Bacteria 1226
95 Ga0373937_0371574 3300036401 Bacteria 1356
96 Ga0395899_0042249 3300037312 Bacteria 3404
97 Ga0395900_0021849 3300037418 Bacteria 6543
98 Ga0395900_0255010 3300037418 Bacteria 1754
99 Ga0395898_0095883 3300037466 Bacteria 2850
100 Ga0395905_0192138 3300037471 Bacteria 1915
101 Ga0395901_0511560 3300038443 Bacteria 1221
102 Ga0436365_0276360 3300039437 Bacteria 997
103 Ga0436365_1457188 3300039437 Bacteria 1189
104 Ga0436361_0489318 3300039447 Unclassified 1050
105 Ga0436361_0999401 3300039447 Bacteria 2708
106 Ga0439465_0000813 3300041413 Bacteria 9820
107 Ga0451833_0105841 3300041491 Bacteria 3101
108 Ga0439450_055251 3300042008 Bacteria 951
109 Ga0451577_0038871 3300042876 Bacteria 4278
110 Ga0451577_0192069 3300042876 Bacteria 1842
111 Ga0466965_0205985 3300044683 Bacteria 1045
112 Ga0453684_0339800 3300044712 Bacteria 1696
113 Ga0495650_0090889 3300046471 Bacteria 1161
114 Ga0495580_0024091 3300046472 Bacteria 4461
115 Ga0495607_0042835 3300046501 Bacteria 2681
116 Ga0495583_0068471 3300046506 Bacteria 1565
117 Ga0495606_0102799 3300046507 Bacteria 1737
118 Ga0495631_0003452 3300046518 Bacteria 8649
119 Ga0495632_0048773 3300046519 Bacteria 2095
120 Ga0495643_0011950 3300046522 Bacteria 5258
121 Ga0495648_0060268 3300046524 Bacteria 2259
122 Ga0495648_0121783 3300046524 Bacteria 1401
123 Ga0495654_0059293 3300046530 Bacteria 1843
124 Ga0495622_0216978 3300046557 Bacteria 848
125 Ga0495668_0003217 3300046616 Bacteria 12461
126 Ga0495611_0006097 3300046648 Bacteria 5143
127 Ga0495625_0001420 3300046660 Bacteria 29255
128 Ga0495625_0033186 3300046660 Bacteria 3820
129 Ga0495625_0057298 3300046660 Bacteria 2771
130 Ga0495661_0168441 3300046665 Bacteria 1170
131 Ga0495588_0000988 3300046674 Bacteria 12429
132 Ga0495613_0001121 3300046689 Bacteria 20386
133 Ga0495671_0031586 3300046692 Bacteria 2707
134 Ga0495660_0008219 3300046810 Bacteria 6114
135 Ga0495660_0045570 3300046810 Bacteria 2407
136 Ga0495604_0002021 3300047317 Bacteria 16363
137 Ga0495680_0132714 3300047322 Bacteria 1828
138 Ga0495686_0000092 3300047472 Bacteria 189292
139 Ga0496117_0155914 3300048920 Bacteria 1344
140 Ga0496118_0030924 3300048921 Bacteria 4454
141 Ga0496121_0074852 3300048924 Bacteria 2707
142 Ga0496122_0125276 3300048925 Bacteria 1646
143 Ga0496125_0082165 3300048928 Bacteria 2457
144 Ga0496126_0029403 3300048929 Bacteria 5220
145 Ga0496126_0089764 3300048929 Bacteria 2705
146 Ga0496126_0503635 3300048929 Bacteria 967
147 Ga0495678_034929 3300049459 Bacteria 2065
148 Ga0501034_0582139 3300049571 Bacteria 1026
149 Ga0501037_0529434 3300049573 Bacteria 797
150 Ga0501047_0075983 3300049581 Bacteria 3233
151 Ga0501076_0128248 3300049592 Bacteria 2056
152 Ga0501076_0288991 3300049592 Bacteria 1343
153 Ga0501076_0365639 3300049592 Bacteria 1185
154 Ga0501081_0568734 3300049743 Bacteria 847
155 nmdc:mga04h51_15030_c1 3300050495 Bacteria 2224
156 nmdc:mga0sz30_100865_c1 3300050516 Bacteria 1261
157 Ga0500610_0013054 3300053079 Bacteria 3850
158 Ga0500578_0044185 3300053086 Bacteria 2860
159 Ga0500643_059676 3300053087 Bacteria 1073
160 Ga0500641_0017542 3300053096 Bacteria 2679
161 Ga0500554_058528 3300053102 Bacteria 1231
162 Ga0500557_015147 3300053105 Bacteria 2076
163 Ga0500562_012785 3300053108 Bacteria 2137
164 Ga0500569_002066 3300053109 Bacteria 3905
165 Ga0500652_000153 3300053131 Bacteria 26370
166 Ga0500568_0000881 3300053139 Bacteria 21071
167 Ga0500616_0000014 3300053153 Bacteria 637918
168 Ga0500622_0011947 3300053156 Bacteria 4722
169 Ga0500627_0245888 3300053158 Bacteria 793
170 Ga0500645_013374 3300053730 Bacteria 2633
171 Ga0501084_0099263 3300054114 Bacteria 2445
172 Ga0501082_0063826 3300060353 Bacteria 3171
173 Ga0501082_0202043 3300060353 Bacteria 1729
174 Ga0530510_0081957 3300061734 Bacteria 2349
175 Ga0530510_0344564 3300061734 Bacteria 1119
176 Ga0530510_0528420 3300061734 Bacteria 895
177 2510135826 2510065019 Bacteria 6903379
178 2510839480 2510461069 Bacteria 5505000
179 2510897311 2510461076 Bacteria 8618824
180 2511137106 2510917022 Bacteria 6504556
181 2511194731 2510917030 Bacteria 7460662
182 2513570993 2513237084 Bacteria 7231967
183 2513574803 2513237085 Bacteria 7695351
184 2513634054 2513237093 Bacteria 7545552
185 2513924441 2513237146 Bacteria 7166346
186 2513955990 2513237150 Bacteria 6553639
187 2514022182 2513237162 Bacteria 7468464
188 2515115036 2515075009 Bacteria 7288508
189 2515633929 2515154113 Bacteria 7807172
190 2515641252 2515154114 Bacteria 7848616
191 2515659743 2515154116 Bacteria 7552979
192 2515740990 2515154134 Bacteria 7220242
193 2517038623 2516653077 Bacteria 7555578
194 2517078878 2516653085 Bacteria 7346596
195 2517097666 2517093000 Bacteria 7412387
196 2517409098 2517287029 Bacteria 6905599
197 2520375807 2519899620 Bacteria 6499161
198 2530648201 2529292951 Bacteria 6916614
199 2558905999 2558860112 Bacteria 9931328
200 2585201126 2582581294 Bacteria 6626667
201 2585223413 2582581298 Bacteria 7315509
202 2585273641 2582581307 Bacteria 6597605
203 2585279946 2582581308 Bacteria 7413247
204 2585326277 2582581315 Bacteria 7318924
205 2585523789 2585427526 Bacteria 7258840
206 2585541814 2585427528 Bacteria 6842387
207 2585545991 2585427529 Bacteria 7395659
208 2585553393 2585427530 Bacteria 7383882
209 2585559815 2585427531 Bacteria 6992870
210 2585840538 2585427593 Bacteria 7141551
211 2585906007 2585427609 Bacteria 6667127
212 2587978878 2585428125 Bacteria 6662905
213 2588290801 2588253510 Bacteria 6901809
214 2599419596 2599185170 Bacteria 7295545
215 2603859405 2602042107 Bacteria 6226103
216 2616309416 2615840626 Bacteria 7921970
217 2616556254 2615840698 Bacteria 7319877
218 2617380547 2617270742 Bacteria 6808054
219 2644004571 2643221599 Bacteria 6292121
220 2644006939 2643221599 Bacteria 6292121
221 2644049588 2643221607 Bacteria 6314006
222 2644196917 2643221634 Bacteria 6705461
223 2644204004 2643221636 Bacteria 6583769
224 2644482622 2643221686 Bacteria 6310811
225 2644499123 2643221689 Bacteria 6042950
226 2671113965 2667528174 Bacteria 6435400
227 2719183490 2718217882 Bacteria 6556348
228 2719734207 2718218009 Bacteria 6478651
229 2721149602 2718218363 Bacteria 6524337
230 2721161004 2718218365 Bacteria 6274507
231 2721166439 2718218366 Bacteria 6425255
232 2722842609 2721755514 Bacteria 6424414
233 2724046963 2721755810 Bacteria 6479005
234 2724112556 2721755823 Bacteria 6752556
235 2725946612 2724679232 Bacteria 7646494
236 2730166725 2728369365 Bacteria 6555560
237 2730300636 2728369397 Bacteria 6274511
238 2739038871 2738541333 Bacteria 7106503
239 2753460628 2751185821 Bacteria 6189929
240 2765464051 2765235802 Bacteria 5618596
241 2766063314 2765235942 Bacteria 7445910
242 2778173870 2775507266 Bacteria 7392367
243 2793341188 2791355263 Bacteria 6872478
244 2793349520 2791355264 Bacteria 6429314
245 2793358366 2791355266 Bacteria 7116587
246 2793365487 2791355267 Bacteria 7222458
247 2806046627 2802429633 Bacteria 7341974
248 2806051388 2802429634 Bacteria 7083200
249 2806059377 2802429635 Bacteria 7650140
250 2806066660 2802429636 Bacteria 7597525
251 2806073717 2802429637 Bacteria 7067217
252 2819608705 2818991448 Bacteria 6772224
253 2819640813 2818991453 Bacteria 7181617
254 2821449951 2821443989 Bacteria 7658172
255 2831869636 2831864461 Bacteria 6502356
256 2838026367 2838022645 Bacteria 6494267
257 2838029593 2838029111 Bacteria 6603031
258 2838039869 2838035591 Bacteria 7166484
259 2838044712 2838042994 Bacteria 6046894
260 2838664152 2838661181 Bacteria 7385261
261 2838680179 2838680041 Bacteria 6545511
262 2838689690 2838686498 Bacteria 7807632
263 2838695790 2838694306 Bacteria 6853137
264 2838709165 2838707686 Bacteria 6619912
265 2838731615 2838729681 Bacteria 7400765
266 2838744556 2838742623 Bacteria 7396178
267 2841853096 2841851746 Bacteria 7532261
268 2842079599 2842077413 Bacteria 6508645
269 2842112588 2842110456 Bacteria 7656360
270 2842120217 2842118031 Bacteria 7033875
271 2842160423 2842156927 Bacteria 6894975
272 2842165597 2842163707 Bacteria 6916235
273 2842183911 2842180545 Bacteria 6888678
274 2842202128 2842198810 Bacteria 6608673
275 2842231492 2842229732 Bacteria 7475766
276 2842238576 2842237096 Bacteria 6620661
277 2842246038 2842243621 Bacteria 7421798
278 2842260416 2842257432 Bacteria 7401195
279 2842273826 2842271015 Bacteria 7807131
280 2842293260 2842291075 Bacteria 7076806
281 2842308946 2842304105 Bacteria 7023636
282 2842334920 2842333319 Bacteria 8899485
283 2842370641 2842370503 Bacteria 7038661
284 2842379657 2842377471 Bacteria 7140707
285 2842386728 2842384541 Bacteria 7057858
286 2842475977 2842475841 Bacteria 6603183
287 2842486061 2842482326 Bacteria 7212537
288 2842503121 2842502639 Bacteria 6604161
289 2842512984 2842509118 Bacteria 6850950
290 2842927986 2842922631 Bacteria 5824079
291 2844456437 2844454524 Bacteria 7952546
292 2857522033 2857516855 Bacteria 7787325
293 2857529182 2857524615 Bacteria 6615449
294 2857533303 2857531043 Bacteria 6754041
295 2862387185 2862382967 Bacteria 10317375
296 2863074656 2863067949 Bacteria 8541735
297 2870790006 2870782633 Bacteria 9624083
298 2884342617 2884338543 Bacteria 4610696
299 2904430767 2904424332 Bacteria 7633521
300 2919101709 2919100787 Bacteria 7710546
301 2919140887 2919138771 Bacteria 5281312
302 2919408494 2919408235 Bacteria 6149349
303 2919453720 2919450847 Bacteria 5631160
304 2933023505 2933016740 Bacteria 6355406
305 2933575390 2933570622 Bacteria 7023390
306 2933588523 2933586486 Bacteria 7667493
307 2935896310 2935894831 Bacteria 6620579
308 2935902484 2935901341 Bacteria 7341747
309 2936369359 2936367885 Bacteria 7324495
310 2936380054 2936375103 Bacteria 6652732
311 2990090366 2990088156 Bacteria 6657676
312 2996888142 2996887358 Bacteria 5795980
313 3003931477 3003930520 Bacteria 5667563
314 3005410790 3005409236 Bacteria 7188837
315 3005423115 3005416602 Bacteria 7064308
316 3005456525 3005452660 Bacteria 5889319
317 3006499953 3006493962 Bacteria 8825450
318 639646229 639633055 Bacteria 7751309
319 644751739 644736347 Bacteria 6476522
320 8005261306 8005258706 Bacteria 6184835
321 8005310409 8005307578 Bacteria 7395396
322 8005315442 8005314921 Bacteria 7072929
323 8005322669 8005321885 Bacteria 5795980
324 8005377866 8005376324 Bacteria 6590079
325 8005437113 8005430974 Bacteria 6689030
326 8005465733 8005460587 Bacteria 7157962
327 8005564368 8005563573 Bacteria 7153261
328 8005573920 8005570704 Bacteria 6957481
329 8005649339 8005645114 Bacteria 6950293
330 8005685421 8005682033 Bacteria 6726518
331 8008560079 8008558824 Bacteria 10610750
332 8018167440 8018163183 Bacteria 7277977
333 8023684684 8023680758 Bacteria 7729763
334 8024479854 8024479707 Bacteria 6954785
335 8024491706 8024486573 Bacteria 6540512
336 8056376078 8056375014 Bacteria 7006639
337 8057477255 8057473075 Bacteria 5892720
338 8057879030 8057874678 Bacteria 7494653
339 Ga0070683_100000962
340 JGI24740J21852_10056945
341 JGI25158J39367_1000011
342 JGI25152J39213_1003078
343 JGI25152J39213_1003698
344 JGI25151J46595_10010867
345 JGI25153J46596_10001273
346 JGI25153J46596_10010409
347 rootH2_10089074
348 JGI25160J50197_1024404
349 Ga0055542_1016046
350 Ga0065707_10089003
351 Ga0070658_10004422
352 Ga0070683_100033328
353 Ga0070660_100044558
354 Ga0070709_10090259
355 Ga0070714_100022339
356 Ga0070710_10040576
357 Ga0070711_100018384
358 Ga0070681_10017585
359 Ga0070698_100122297
360 Ga0070679_100002842
361 Ga0070684_100000297
362 Ga0070684_100076304
363 Ga0068855_100006535
364 Ga0068855_100271672
365 Ga0070664_100011827
366 Ga0068854_100239829
367 Ga0068856_100000581
368 Ga0068856_100546914
369 Ga0068859_100253172
370 Ga0068861_100001232
371 Ga0068861_100064213
372 Ga0068863_100294613
373 Ga0068860_100141220
374 Ga0081455_10000485
375 Ga0081538_10000643
376 Ga0081540_1029154
377 Ga0081539_10044266
378 Ga0070715_10037225
379 Ga0070712_100018795
380 Ga0075369_10030743
381 Ga0075430_100234248
382 Ga0075433_10217244
383 Ga0075434_100245185
384 Ga0075429_100332250
385 Ga0105240_10020790
386 Ga0105240_10535375
387 Ga0105247_10122583
388 Ga0114129_10337113
389 Ga0105249_10051115
390 Ga0105239_10015382
391 Ga0105239_10366812
392 Ga0105246_10426644
393 Ga0157369_10002919
394 Ga0157380_10019361
395 Ga0213872_10032000
396 Ga0209025_1031124
397 Ga0209564_1002105
398 Ga0207692_10013361
399 Ga0207710_10127142
400 Ga0207685_10003888
401 Ga0207699_10052187
402 Ga0207705_10018310
403 Ga0207707_10039270
404 Ga0207695_10002782
405 Ga0207695_10019361
406 Ga0207693_10094428
407 Ga0207663_10031541
408 Ga0207657_10014713
409 Ga0207649_10131691
410 Ga0207700_10062563
411 Ga0207664_10260268
412 Ga0207665_10011136
413 Ga0207661_10000892
414 Ga0207661_10022919
415 Ga0207679_10195515
416 Ga0207667_10103264
417 Ga0207667_10196782
418 Ga0207712_10021797
419 Ga0207640_10204611
420 Ga0207703_10335514
421 Ga0207678_10345165
422 Ga0207702_10001738
423 Ga0207702_10981165
424 Ga0207648_10296462
425 Ga0207674_10554054
426 Ga0207675_100001309
427 Ga0207675_100093482
428 Ga0209813_10012800
429 Ga0307515_10004389
430 Ga0307515_10021080
431 Ga0307513_10044072
432 Ga0307412_10324437
433 Ga0373937_0371574
434 Ga0395899_0042249
435 Ga0395900_0021849
436 Ga0395900_0255010
437 Ga0395898_0095883
438 Ga0395905_0192138
439 Ga0395901_0511560
440 Ga0436365_0276360
441 Ga0436365_1457188
442 Ga0436361_0489318
443 Ga0436361_0999401
444 Ga0439465_0000813
445 Ga0451833_0105841
446 Ga0439450_055251
447 Ga0451577_0038871
448 Ga0451577_0192069
449 Ga0466965_0205985
450 Ga0453684_0339800
451 Ga0495650_0090889
452 Ga0495580_0024091
453 Ga0495607_0042835
454 Ga0495583_0068471
455 Ga0495606_0102799
456 Ga0495631_0003452
457 Ga0495632_0048773
458 Ga0495643_0011950
459 Ga0495648_0060268
460 Ga0495648_0121783
461 Ga0495654_0059293
462 Ga0495622_0216978
463 Ga0495668_0003217
464 Ga0495611_0006097
465 Ga0495625_0001420
466 Ga0495625_0033186
467 Ga0495625_0057298
468 Ga0495661_0168441
469 Ga0495588_0000988
470 Ga0495613_0001121
471 Ga0495671_0031586
472 Ga0495660_0008219
473 Ga0495660_0045570
474 Ga0495604_0002021
475 Ga0495680_0132714
476 Ga0495686_0000092
477 Ga0496117_0155914
478 Ga0496118_0030924
479 Ga0496121_0074852
480 Ga0496122_0125276
481 Ga0496125_0082165
482 Ga0496126_0029403
483 Ga0496126_0089764
484 Ga0496126_0503635
485 Ga0495678_034929
486 Ga0501034_0582139
487 Ga0501037_0529434
488 Ga0501047_0075983
489 Ga0501076_0128248
490 Ga0501076_0288991
491 Ga0501076_0365639
492 Ga0501081_0568734
493 nmdc:mga04h51_15030_c1
494 nmdc:mga0sz30_100865_c1
495 Ga0500610_0013054
496 Ga0500578_0044185
497 Ga0500643_059676
498 Ga0500641_0017542
499 Ga0500554_058528
500 Ga0500557_015147
501 Ga0500562_012785
502 Ga0500569_002066
503 Ga0500652_000153
504 Ga0500568_0000881
505 Ga0500616_0000014
506 Ga0500622_0011947
507 Ga0500627_0245888
508 Ga0500645_013374
509 Ga0501084_0099263
510 Ga0501082_0063826
511 Ga0501082_0202043
512 Ga0530510_0081957
513 Ga0530510_0344564
514 Ga0530510_0528420
515 2510135826
516 2510839480
517 2510897311
518 2511137106
519 2511194731
520 2513570993
521 2513574803
522 2513634054
523 2513924441
524 2513955990
525 2514022182
526 2515115036
527 2515633929
528 2515641252
529 2515659743
530 2515740990
531 2517038623
532 2517078878
533 2517097666
534 2517409098
535 2520375807
536 2530648201
537 2558905999
538 2585201126
539 2585223413
540 2585273641
541 2585279946
542 2585326277
543 2585523789
544 2585541814
545 2585545991
546 2585553393
547 2585559815
548 2585840538
549 2585906007
550 2587978878
551 2588290801
552 2599419596
553 2603859405
554 2616309416
555 2616556254
556 2617380547
557 2644004571
558 2644006939
559 2644049588
560 2644196917
561 2644204004
562 2644482622
563 2644499123
564 2671113965
565 2719183490
566 2719734207
567 2721149602
568 2721161004
569 2721166439
570 2722842609
571 2724046963
572 2724112556
573 2725946612
574 2730166725
575 2730300636
576 2739038871
577 2753460628
578 2765464051
579 2766063314
580 2778173870
581 2793341188
582 2793349520
583 2793358366
584 2793365487
585 2806046627
586 2806051388
587 2806059377
588 2806066660
589 2806073717
590 2819608705
591 2819640813
592 2821449951
593 2831869636
594 2838026367
595 2838029593
596 2838039869
597 2838044712
598 2838664152
599 2838680179
600 2838689690
601 2838695790
602 2838709165
603 2838731615
604 2838744556
605 2841853096
606 2842079599
607 2842112588
608 2842120217
609 2842160423
610 2842165597
611 2842183911
612 2842202128
613 2842231492
614 2842238576
615 2842246038
616 2842260416
617 2842273826
618 2842293260
619 2842308946
620 2842334920
621 2842370641
622 2842379657
623 2842386728
624 2842475977
625 2842486061
626 2842503121
627 2842512984
628 2842927986
629 2844456437
630 2857522033
631 2857529182
632 2857533303
633 2862387185
634 2863074656
635 2870790006
636 2884342617
637 2904430767
638 2919101709
639 2919140887
640 2919408494
641 2919453720
642 2933023505
643 2933575390
644 2933588523
645 2935896310
646 2935902484
647 2936369359
648 2936380054
649 2990090366
650 2996888142
651 3003931477
652 3005410790
653 3005423115
654 3005456525
655 3006499953
656 639646229
657 644751739
658 8005261306
659 8005310409
660 8005315442
661 8005322669
662 8005377866
663 8005437113
664 8005465733
665 8005564368
666 8005573920
667 8005649339
668 8005685421
669 8008560079
670 8018167440
671 8023684684
672 8024479854
673 8024491706
674 8056376078
675 8057477255
676 8057879030

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

32

227

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

38

279

0.92

PF08659

KR

KR domain

33

213

0.86

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

34

256

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tox-assembly1.cif.gz_B-2 crystal structure of a short chain dehydrogenase in complex with nad(p) from sinorhizobium meliloti 1021 0.9893 3 253
3tox-assembly3.cif.gz_F crystal structure of a short chain dehydrogenase in complex with nad(p) from sinorhizobium meliloti 1021 0.9887 3 254
3tox-assembly1.cif.gz_A crystal structure of a short chain dehydrogenase in complex with nad(p) from sinorhizobium meliloti 1021 0.987 3 253
3tox-assembly2.cif.gz_G-3 crystal structure of a short chain dehydrogenase in complex with nad(p) from sinorhizobium meliloti 1021 0.9857 3 253
6ixm-assembly1.cif.gz_B crystal structure of the ketone reductase chkred20 from the genome of chryseobacterium sp. ca49 complexed with nad 0.9837 3 252
ID Description Score Start End Superfamily
3toxG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9858 3 253 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9837 3 252 3.40.50.720
4urfA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9805 4 249 3.40.50.720
3toxG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.978 3 253 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9756 3 252 3.40.50.720
ID Description Score Start End GO Terms
AF-B9TE20-F1-model_v4 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase, putative (EC 1.1.1.100) 1.001 1 254 GO:0004316
AF-A0A368Z4V7-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9997 1 254 GO:0016616
AF-A0A3S0GY22-F1-model_v4 deleted 0.9985 1 254
AF-B9TE20-F1-model_v4 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase, putative (EC 1.1.1.100) 0.9976 1 254 GO:0004316
AF-A8TJV3-F1-model_v4 Short chain dehydrogenase 0.9974 3 254

Map