F413295

General Info

Members Datasets Scaffolds Average Seq Length
337 239 674 483

Family's Representative Sequence

Representative Sequence 3300053139|Ga0500568_0000976|Ga0500568_0000976_6251_8014
Length 570
Sequence MDRGHFSRDARIGEGERIEGGRMASPASVSVANSFAFAALSGHRRCREAEEPGRLGSAVVSTHNPSPESSSDQSADFDQSSRPKIALTTAQRAAVAELLRVSPVADELGTRFAAAGYDLHLVGGSVRDALLGRLGDDLDFCTNAHPDRVLELIDGWAEAVWTTGIVFGTVGLAKCGLRLEITTYRAEAYDRVTRNPVVRFGDSLGDDLVRRDFTVNAMAVSLPGHQFADPHGGVRDLAAKVIRTPGTPEDSFGDDPLRMLRVARFAAQLRFAVAPEVVSAMTAMADEITRITPERVRDELTKLLLGVDPVAGLRLLVDTGLAEHVLPELPGMRMEIDEHAQHKDVYEHSLTVLRQAMALETDGPDLVLRLAALMHDVGKPATRRAETDGKVSFHHHEVVGAKLTRKRLRTLRFPKELIEQVADLVFLHLRFHGFGRGEWTDSAVRRYVTDAGELLPRLHKLVRSDCTTRNRRKAERLAADYDALEQRVALLREQENLDRVRPDLDGNAIMELLGVPAGPVVGRAWKHLKEIRLDRGPLSREEAEAELTRWAVEQGLSPASDGVDAPSPFG

Samples

Sample ID Description Type Environment
1 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
79 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
80 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
107 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
108 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
138 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
170 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
171 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
172 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
173 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
174 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
175 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
176 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
177 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
178 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
179 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
180 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
181 2501939600 Micromonospora sp. L5 Isolate Unclassified
182 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
183 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
184 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
185 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
186 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
187 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
188 2643221548 Streptomyces sp. Root55 Isolate Unclassified
189 2643221578 Streptomyces sp. Root63 Isolate Unclassified
190 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
191 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
192 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
193 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
194 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
195 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
196 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
197 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
198 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
199 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
200 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
201 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
202 2855683550 Micromonospora sp. RP3T Isolate Unclassified
203 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
204 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
205 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
206 2858868258 Micromonospora sp. MH33 Isolate Unclassified
207 2858882152 Micromonospora noduli MED15 Isolate Nodule
208 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
209 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
210 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
211 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
212 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
213 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
214 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
215 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
216 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
217 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
218 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
219 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
220 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
221 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
222 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
223 2902582711 Micromonospora sp. AP08 Isolate Unclassified
224 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
225 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
226 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
227 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
228 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
229 649633069 Micromonospora sp. L5 Isolate Unclassified
230 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
231 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
232 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
233 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
234 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
235 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
236 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
237 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
238 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
239 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.9
Metatranscriptomes 0.59
Isolates 17.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.67
Nodule 1.78
Rhizoplane 6.82
Rhizosphere 71.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500568_0000976 3300053139 Bacteria 19699
2 Ga0070658_10000575 3300005327 Bacteria 31941
3 Ga0070658_10005848 3300005327 Bacteria 9973
4 Ga0070680_100000185 3300005336 Bacteria 40262
5 Ga0070680_100224006 3300005336 Bacteria 1587
6 Ga0070682_100037262 3300005337 Bacteria 2976
7 Ga0068868_100149114 3300005338 Bacteria 1925
8 Ga0070660_100103965 3300005339 Bacteria 2253
9 Ga0070668_100006286 3300005347 Bacteria 8792
10 Ga0070668_100057379 3300005347 Bacteria 3008
11 Ga0070675_100001500 3300005354 Bacteria 17238
12 Ga0070714_100022442 3300005435 Bacteria 5176
13 Ga0070713_100065368 3300005436 Bacteria 3055
14 Ga0070713_100146999 3300005436 Bacteria 2093
15 Ga0070711_100033312 3300005439 Bacteria 3430
16 Ga0070700_100018739 3300005441 Bacteria 3983
17 Ga0070663_100029771 3300005455 Bacteria 3735
18 Ga0070681_10001033 3300005458 Bacteria 23597
19 Ga0070706_100155601 3300005467 Bacteria 2134
20 Ga0070698_100026959 3300005471 Bacteria 5975
21 Ga0070679_100000953 3300005530 Bacteria 25147
22 Ga0070684_100005263 3300005535 Bacteria 9902
23 Ga0070684_100067836 3300005535 Bacteria 3134
24 Ga0070684_100158032 3300005535 Bacteria 2056
25 Ga0070665_100012618 3300005548 Bacteria 8507
26 Ga0068855_100003931 3300005563 Bacteria 18140
27 Ga0068855_100192153 3300005563 Bacteria 2302
28 Ga0070664_100003358 3300005564 Bacteria 12944
29 Ga0068854_100017112 3300005578 Bacteria 4848
30 Ga0068852_100011235 3300005616 Bacteria 6731
31 Ga0068864_100189312 3300005618 Bacteria 1885
32 Ga0068863_100096624 3300005841 Bacteria 2805
33 Ga0068858_100131989 3300005842 Bacteria 2342
34 Ga0068860_100040801 3300005843 Bacteria 4434
35 Ga0068862_100127402 3300005844 Bacteria 2249
36 Ga0081540_1003409 3300005983 Bacteria 12582
37 Ga0081540_1024555 3300005983 Bacteria 3496
38 Ga0081539_10000070 3300005985 Bacteria 235651
39 Ga0081539_10003934 3300005985 Bacteria 17236
40 Ga0081539_10022250 3300005985 Bacteria 4200
41 Ga0081539_10037032 3300005985 Bacteria 2911
42 Ga0075428_100021564 3300006844 Bacteria 7132
43 Ga0075428_100148203 3300006844 Bacteria 2550
44 Ga0075428_100294428 3300006844 Bacteria 1745
45 Ga0075430_100000705 3300006846 Bacteria 25484
46 Ga0075430_100005086 3300006846 Bacteria 11074
47 Ga0075430_100193653 3300006846 Bacteria 1689
48 Ga0075431_100058072 3300006847 Bacteria 3991
49 Ga0075431_100279776 3300006847 Bacteria 1689
50 Ga0075429_100009415 3300006880 Bacteria 8481
51 Ga0075429_100035857 3300006880 Bacteria 4313
52 Ga0075429_100073516 3300006880 Bacteria 2977
53 Ga0105240_10018832 3300009093 Bacteria 9246
54 Ga0111539_10164035 3300009094 Bacteria 2599
55 Ga0105245_10009995 3300009098 Bacteria 8262
56 Ga0114129_10000106 3300009147 Bacteria 82537
57 Ga0114129_10000749 3300009147 Bacteria 41270
58 Ga0114129_10029136 3300009147 Bacteria 7820
59 Ga0114129_10049049 3300009147 Bacteria 5934
60 Ga0114129_10108520 3300009147 Bacteria 3832
61 Ga0114129_10168515 3300009147 Bacteria 2987
62 Ga0105241_10003424 3300009174 Bacteria 11814
63 Ga0105248_10010190 3300009177 Bacteria 10352
64 Ga0105238_10005083 3300009551 Bacteria 13005
65 Ga0105239_10013446 3300010375 Bacteria 9094
66 Ga0157369_10313630 3300013105 Bacteria 1631
67 Ga0157374_10038439 3300013296 Bacteria 4399
68 Ga0163163_10001297 3300014325 Bacteria 21131
69 Ga0157379_10043733 3300014968 Bacteria 3999
70 Ga0157379_10052211 3300014968 Bacteria 3651
71 Ga0197907_11142158 3300020069 Bacteria 3475
72 Ga0206353_10433185 3300020082 Bacteria 4623
73 Ga0213875_10000554 3300021388 Bacteria 30576
74 Ga0213875_10005807 3300021388 Bacteria 6566
75 Ga0207699_10007713 3300025906 Bacteria 5267
76 Ga0207705_10002363 3300025909 Bacteria 14587
77 Ga0207654_10061866 3300025911 Bacteria 2192
78 Ga0207707_10001189 3300025912 Bacteria 24525
79 Ga0207695_10039195 3300025913 Bacteria 5094
80 Ga0207671_10000109 3300025914 Bacteria 128184
81 Ga0207693_10115631 3300025915 Bacteria 2106
82 Ga0207660_10000184 3300025917 Bacteria 39835
83 Ga0207657_10139077 3300025919 Bacteria 1985
84 Ga0207649_10080338 3300025920 Bacteria 2109
85 Ga0207652_10001190 3300025921 Bacteria 23399
86 Ga0207694_10021660 3300025924 Bacteria 4870
87 Ga0207659_10077329 3300025926 Bacteria 2449
88 Ga0207687_10095445 3300025927 Bacteria 2178
89 Ga0207700_10003842 3300025928 Bacteria 8777
90 Ga0207700_10010686 3300025928 Bacteria 5809
91 Ga0207700_10048415 3300025928 Bacteria 3156
92 Ga0207690_10098638 3300025932 Bacteria 2081
93 Ga0207706_10126745 3300025933 Bacteria 2245
94 Ga0207640_10007741 3300025981 Bacteria 5935
95 Ga0207677_10134603 3300026023 Bacteria 1882
96 Ga0207678_10044031 3300026067 Bacteria 3862
97 Ga0207708_10073755 3300026075 Bacteria 2616
98 Ga0207641_10081965 3300026088 Bacteria 2802
99 Ga0207698_10029338 3300026142 Bacteria 3939
100 Ga0207698_10071324 3300026142 Bacteria 2756
101 Ga0268266_10024959 3300028379 Bacteria 5087
102 Ga0268265_10013698 3300028380 Bacteria 5517
103 Ga0268265_10054418 3300028380 Bacteria 3037
104 Ga0268264_10052644 3300028381 Bacteria 3395
105 Ga0307517_10035756 3300028786 Bacteria 5613
106 Ga0307515_10004726 3300028794 Bacteria 27912
107 Ga0307515_10058171 3300028794 Bacteria 5574
108 Ga0307512_10002596 3300030522 Bacteria 22436
109 Ga0307512_10010307 3300030522 Bacteria 8925
110 Ga0307513_10004359 3300031456 Bacteria 18907
111 Ga0307513_10076180 3300031456 Bacteria 3480
112 Ga0307513_10253201 3300031456 Bacteria 1556
113 Ga0307509_10021695 3300031507 Bacteria 7254
114 Ga0307408_100066018 3300031548 Bacteria 2656
115 Ga0307508_10003680 3300031616 Bacteria 15360
116 Ga0307508_10059650 3300031616 Bacteria 3374
117 Ga0307516_10004696 3300031730 Bacteria 16709
118 Ga0307516_10013874 3300031730 Bacteria 8556
119 Ga0307516_10109499 3300031730 Bacteria 2567
120 Ga0307405_10002395 3300031731 Bacteria 8255
121 Ga0307405_10021209 3300031731 Bacteria 3648
122 Ga0307413_10002243 3300031824 Bacteria 7792
123 Ga0307413_10008611 3300031824 Bacteria 4830
124 Ga0326468_10000129 3300031889 Bacteria 7087
125 Ga0307406_10004663 3300031901 Bacteria 7467
126 Ga0307406_10059810 3300031901 Bacteria 2454
127 Ga0307406_10060921 3300031901 Bacteria 2435
128 Ga0307409_100000333 3300031995 Bacteria 19495
129 Ga0307409_100009504 3300031995 Bacteria 5977
130 Ga0307409_100074759 3300031995 Bacteria 2709
131 Ga0307416_100002364 3300032002 Bacteria 10795
132 Ga0307416_100015975 3300032002 Bacteria 5202
133 Ga0307411_10055836 3300032005 Bacteria 2600
134 Ga0307415_100000981 3300032126 Bacteria 13130
135 Ga0307415_100006413 3300032126 Bacteria 6341
136 Ga0307415_100055031 3300032126 Bacteria 2720
137 Ga0307415_100209424 3300032126 Bacteria 1554
138 Ga0307507_10000002 3300033179 Bacteria 388650
139 Ga0307507_10024353 3300033179 Bacteria 6602
140 Ga0373951_0000111 3300035091 Bacteria 31636
141 Ga0373923_0007390 3300035111 Bacteria 3860
142 Ga0373953_0004189 3300035117 Bacteria 4577
143 Ga0373955_0030167 3300035172 Bacteria 2827
144 Ga0373942_0000103 3300035207 Bacteria 18990
145 Ga0316574_0002480 3300035398 Bacteria 9271
146 Ga0373935_0003975 3300035692 Bacteria 8632
147 Ga0395899_0004292 3300037312 Bacteria 11139
148 Ga0395900_0005334 3300037418 Bacteria 13469
149 Ga0395898_0001725 3300037466 Bacteria 28919
150 Ga0395898_0098955 3300037466 Bacteria 2801
151 Ga0395905_0010411 3300037471 Bacteria 9053
152 Ga0395905_0119072 3300037471 Bacteria 2482
153 Ga0436364_0117376 3300037853 Bacteria 2489
154 Ga0436364_0988103 3300037853 Bacteria 24479
155 Ga0436364_1292056 3300037853 Bacteria 38351
156 Ga0395901_0001960 3300038443 Bacteria 21167
157 Ga0395901_0004529 3300038443 Bacteria 14015
158 Ga0395901_0020383 3300038443 Bacteria 6787
159 Ga0451791_0346095 3300041451 Bacteria 2457
160 Ga0451853_0056272 3300041512 Bacteria 2732
161 Ga0451853_0522836 3300041512 Bacteria 5485
162 Ga0466969_0006466 3300044656 Bacteria 6236
163 Ga0466969_0014645 3300044656 Bacteria 4123
164 Ga0466969_0018264 3300044656 Bacteria 3654
165 Ga0466969_0054642 3300044656 Bacteria 1955
166 Ga0466966_0011993 3300044684 Bacteria 5743
167 Ga0466961_0001146 3300044693 Bacteria 16288
168 Ga0466961_0022313 3300044693 Bacteria 4072
169 Ga0466961_0142398 3300044693 Bacteria 1501
170 Ga0466971_0001486 3300044719 Bacteria 9895
171 Ga0466970_0019285 3300044765 Bacteria 3535
172 Ga0466970_0080570 3300044765 Bacteria 1759
173 Ga0466959_0001641 3300045049 Bacteria 13823
174 Ga0466959_0005691 3300045049 Bacteria 8577
175 Ga0466959_0136740 3300045049 Bacteria 1734
176 Ga0495592_0026669 3300046454 Bacteria 4379
177 Ga0495592_0138729 3300046454 Bacteria 1693
178 Ga0495603_0001203 3300046455 Bacteria 15116
179 Ga0495629_0001004 3300046459 Bacteria 22632
180 Ga0495651_0001278 3300046462 Bacteria 19487
181 Ga0495651_0005420 3300046462 Bacteria 9730
182 Ga0495651_0172406 3300046462 Bacteria 1539
183 Ga0495606_0001892 3300046507 Bacteria 26163
184 Ga0495608_0063152 3300046511 Bacteria 2431
185 Ga0495628_0004964 3300046516 Bacteria 11701
186 Ga0495632_0047763 3300046519 Bacteria 2122
187 Ga0495652_0002845 3300046529 Bacteria 17436
188 Ga0495652_0016525 3300046529 Bacteria 6600
189 Ga0495652_0037477 3300046529 Bacteria 4207
190 Ga0495652_0101935 3300046529 Bacteria 2326
191 Ga0495587_0017759 3300046536 Bacteria 4415
192 Ga0495645_0002774 3300046543 Bacteria 11881
193 Ga0495622_0025275 3300046557 Bacteria 2774
194 Ga0495668_0000199 3300046616 Bacteria 88656
195 Ga0495625_0000457 3300046660 Bacteria 61280
196 Ga0495635_0001108 3300046663 Bacteria 17896
197 Ga0495635_0008065 3300046663 Bacteria 7357
198 Ga0495646_0035993 3300046680 Bacteria 3068
199 Ga0495613_0000812 3300046689 Bacteria 24196
200 Ga0495600_0026081 3300046809 Bacteria 3769
201 Ga0495581_0091262 3300047315 Bacteria 1767
202 Ga0495581_0142796 3300047315 Bacteria 1397
203 Ga0495604_0012546 3300047317 Bacteria 6739
204 Ga0495676_0003047 3300047321 Bacteria 15156
205 Ga0495680_0010284 3300047322 Bacteria 8346
206 Ga0495602_0042491 3300048088 Bacteria 4141
207 Ga0495614_0022805 3300048089 Bacteria 2699
208 Ga0495626_0000059 3300048091 Bacteria 146814
209 Ga0496102_0004290 3300048905 Bacteria 12053
210 Ga0496103_0024632 3300048906 Bacteria 3633
211 Ga0496104_0028696 3300048907 Bacteria 5157
212 Ga0496104_0224395 3300048907 Bacteria 1791
213 Ga0496105_0022821 3300048908 Bacteria 5071
214 Ga0496105_0064719 3300048908 Bacteria 3017
215 Ga0496108_0000196 3300048911 Bacteria 55981
216 Ga0496108_0001314 3300048911 Bacteria 19538
217 Ga0496108_0009802 3300048911 Bacteria 7760
218 Ga0496109_0033071 3300048912 Bacteria 4651
219 Ga0496109_0158154 3300048912 Bacteria 2123
220 Ga0496110_0000656 3300048913 Bacteria 23611
221 Ga0496110_0026949 3300048913 Bacteria 4922
222 Ga0496111_0000929 3300048914 Bacteria 16010
223 Ga0496111_0001201 3300048914 Bacteria 14452
224 Ga0496112_0008209 3300048915 Bacteria 9338
225 Ga0496113_0017886 3300048916 Bacteria 4928
226 Ga0496113_0018277 3300048916 Bacteria 4879
227 Ga0496113_0068199 3300048916 Bacteria 2699
228 Ga0496114_0001238 3300048917 Bacteria 19311
229 Ga0496114_0109033 3300048917 Bacteria 2371
230 Ga0496114_0111036 3300048917 Bacteria 2349
231 Ga0501031_0015473 3300049568 Bacteria 4953
232 Ga0501036_0010175 3300049572 Bacteria 7750
233 Ga0501036_0103857 3300049572 Bacteria 2403
234 Ga0501037_0090079 3300049573 Bacteria 2219
235 Ga0501039_0056021 3300049575 Bacteria 3054
236 Ga0501040_0139917 3300049576 Bacteria 1704
237 Ga0501041_0048370 3300049577 Bacteria 2590
238 Ga0501043_0174943 3300049579 Bacteria 1674
239 Ga0501046_0086308 3300049580 Bacteria 2419
240 Ga0501046_0090326 3300049580 Bacteria 2357
241 Ga0501047_0048065 3300049581 Bacteria 4121
242 Ga0501071_0032561 3300049587 Bacteria 3702
243 Ga0501072_0038890 3300049588 Bacteria 3734
244 Ga0501074_0040837 3300049590 Bacteria 3359
245 Ga0501074_0117458 3300049590 Bacteria 1903
246 Ga0501080_0044497 3300049742 Bacteria 4133
247 nmdc:mga05p37_17512_c1 3300050507 Bacteria 8649
248 nmdc:mga05p37_24296_c1 3300050507 Bacteria 7365
249 nmdc:mga05p37_378865_c1 3300050507 Bacteria 1658
250 nmdc:mga05p37_45748_c1 3300050507 Bacteria 5382
251 nmdc:mga09592_130772_c1 3300050508 Bacteria 2160
252 nmdc:mga09592_131_c4 3300050508 Bacteria 27980
253 nmdc:mga09592_68943_c1 3300050508 Bacteria 3000
254 nmdc:mga0qj67_125973_c1 3300050509 Bacteria 2073
255 nmdc:mga0qj67_168592_c1 3300050509 Bacteria 1778
256 nmdc:mga0qj67_183_c3 3300050509 Bacteria 27540
257 nmdc:mga0qj67_22643_c1 3300050509 Bacteria 4827
258 nmdc:mga0qj67_4066_c1 3300050509 Bacteria 10609
259 nmdc:mga06r32_32995_c1 3300050510 Bacteria 4875
260 nmdc:mga06r32_417_c1 3300050510 Bacteria 3791
261 nmdc:mga06r32_57730_c1 3300050510 Bacteria 3728
262 nmdc:mga08y16_11202_c1 3300050511 Bacteria 9418
263 Ga0495601_0012761 3300053077 Bacteria 5042
264 Ga0495601_0022734 3300053077 Bacteria 3853
265 Ga0495601_0050220 3300053077 Bacteria 2630
266 Ga0495612_0000777 3300053078 Bacteria 12954
267 Ga0500646_0014841 3300053090 Bacteria 2025
268 Ga0500651_0022097 3300053093 Bacteria 3973
269 Ga0500641_0023281 3300053096 Bacteria 2380
270 Ga0500569_005572 3300053109 Bacteria 2711
271 Ga0500594_0007884 3300053118 Bacteria 2416
272 Ga0500652_017526 3300053131 Bacteria 2626
273 Ga0500588_0000347 3300053146 Bacteria 7082
274 Ga0500600_0039419 3300053149 Bacteria 2733
275 Ga0501082_0063681 3300060353 Bacteria 3175
276 Ga0466962_0001105 3300061719 Bacteria 12418
277 Ga0466962_0001370 3300061719 Bacteria 11285
278 Ga0530510_0045265 3300061734 Bacteria 3179
279 2501944862 2501939600 Bacteria 6907073
280 2515498203 2515154088 Bacteria 5526283
281 2515721853 2515154129 Bacteria 5584369
282 2515759424 2515154137 Bacteria 5711575
283 2516084207 2515154202 Bacteria 5471270
284 2516092286 2515154203 Bacteria 5458536
285 2623585763 2622736626 Bacteria 7181580
286 2643763154 2643221548 Bacteria 8053412
287 2643900167 2643221578 Bacteria 9213798
288 2644405609 2643221673 Bacteria 9196637
289 2644463976 2643221682 Bacteria 6743283
290 2676482989 2675903059 Bacteria 8644972
291 2739205780 2738543005 Bacteria 5278128
292 2753269723 2751185782 Bacteria 11227053
293 2772642836 2772190715 Bacteria 6959372
294 2819697322 2818991463 Bacteria 7948711
295 2831938176 2831935698 Bacteria 5963223
296 2832005337 2832004796 Bacteria 6538017
297 2842892356 2842888712 Bacteria 4279094
298 2855675120 2855670206 Bacteria 7120389
299 2855679769 2855676851 Bacteria 7063653
300 2855688029 2855683550 Bacteria 7134265
301 2856859646 2856858025 Bacteria 7255264
302 2857294411 2857288857 Bacteria 7189066
303 2858854698 2858848962 Bacteria 6963058
304 2858869487 2858868258 Bacteria 7683772
305 2858885241 2858882152 Bacteria 7230291
306 2858891892 2858888857 Bacteria 7060307
307 2858899671 2858895516 Bacteria 7378898
308 2858904911 2858902515 Bacteria 7086037
309 2866071454 2866065130 Bacteria 6518152
310 2867304711 2867302475 Bacteria 7087181
311 2867318721 2867312974 Bacteria 7058875
312 2867323963 2867319477 Bacteria 7069771
313 2867509979 2867507094 Bacteria 6506033
314 2868089924 2868088558 Bacteria 7609351
315 2869052009 2869048445 Bacteria 6875584
316 2869067467 2869061728 Bacteria 7112407
317 2869074761 2869068681 Bacteria 7205615
318 2880494470 2880489317 Bacteria 7096270
319 2880497834 2880495981 Bacteria 7340502
320 2887484452 2887478801 Bacteria 8972725
321 2902588517 2902582711 Bacteria 6187705
322 2929226399 2929219909 Bacteria 6984360
323 2929233103 2929226422 Bacteria 7248583
324 2946049466 2946045630 Bacteria 8527308
325 2990061610 2990059506 Bacteria 9321252
326 2996222825 2996221748 Bacteria 6799777
327 649816354 649633069 Bacteria 6962533
328 8001789654 8001781756 Bacteria 9586736
329 8003831916 8003830390 Bacteria 6541657
330 8003860101 8003856774 Bacteria 7675274
331 8003876153 8003870546 Bacteria 7396674
332 8025484259 8025478263 Bacteria 8209203
333 8054709584 8054704163 Bacteria 7247792
334 8054729109 8054727385 Bacteria 7558670
335 8054740472 8054734606 Bacteria 6947278
336 8055413081 8055412473 Bacteria 6257500
337 8056452950 8056447290 Bacteria 7680491
338 Ga0500568_0000976
339 Ga0070658_10000575
340 Ga0070658_10005848
341 Ga0070680_100000185
342 Ga0070680_100224006
343 Ga0070682_100037262
344 Ga0068868_100149114
345 Ga0070660_100103965
346 Ga0070668_100006286
347 Ga0070668_100057379
348 Ga0070675_100001500
349 Ga0070714_100022442
350 Ga0070713_100065368
351 Ga0070713_100146999
352 Ga0070711_100033312
353 Ga0070700_100018739
354 Ga0070663_100029771
355 Ga0070681_10001033
356 Ga0070706_100155601
357 Ga0070698_100026959
358 Ga0070679_100000953
359 Ga0070684_100005263
360 Ga0070684_100067836
361 Ga0070684_100158032
362 Ga0070665_100012618
363 Ga0068855_100003931
364 Ga0068855_100192153
365 Ga0070664_100003358
366 Ga0068854_100017112
367 Ga0068852_100011235
368 Ga0068864_100189312
369 Ga0068863_100096624
370 Ga0068858_100131989
371 Ga0068860_100040801
372 Ga0068862_100127402
373 Ga0081540_1003409
374 Ga0081540_1024555
375 Ga0081539_10000070
376 Ga0081539_10003934
377 Ga0081539_10022250
378 Ga0081539_10037032
379 Ga0075428_100021564
380 Ga0075428_100148203
381 Ga0075428_100294428
382 Ga0075430_100000705
383 Ga0075430_100005086
384 Ga0075430_100193653
385 Ga0075431_100058072
386 Ga0075431_100279776
387 Ga0075429_100009415
388 Ga0075429_100035857
389 Ga0075429_100073516
390 Ga0105240_10018832
391 Ga0111539_10164035
392 Ga0105245_10009995
393 Ga0114129_10000106
394 Ga0114129_10000749
395 Ga0114129_10029136
396 Ga0114129_10049049
397 Ga0114129_10108520
398 Ga0114129_10168515
399 Ga0105241_10003424
400 Ga0105248_10010190
401 Ga0105238_10005083
402 Ga0105239_10013446
403 Ga0157369_10313630
404 Ga0157374_10038439
405 Ga0163163_10001297
406 Ga0157379_10043733
407 Ga0157379_10052211
408 Ga0197907_11142158
409 Ga0206353_10433185
410 Ga0213875_10000554
411 Ga0213875_10005807
412 Ga0207699_10007713
413 Ga0207705_10002363
414 Ga0207654_10061866
415 Ga0207707_10001189
416 Ga0207695_10039195
417 Ga0207671_10000109
418 Ga0207693_10115631
419 Ga0207660_10000184
420 Ga0207657_10139077
421 Ga0207649_10080338
422 Ga0207652_10001190
423 Ga0207694_10021660
424 Ga0207659_10077329
425 Ga0207687_10095445
426 Ga0207700_10003842
427 Ga0207700_10010686
428 Ga0207700_10048415
429 Ga0207690_10098638
430 Ga0207706_10126745
431 Ga0207640_10007741
432 Ga0207677_10134603
433 Ga0207678_10044031
434 Ga0207708_10073755
435 Ga0207641_10081965
436 Ga0207698_10029338
437 Ga0207698_10071324
438 Ga0268266_10024959
439 Ga0268265_10013698
440 Ga0268265_10054418
441 Ga0268264_10052644
442 Ga0307517_10035756
443 Ga0307515_10004726
444 Ga0307515_10058171
445 Ga0307512_10002596
446 Ga0307512_10010307
447 Ga0307513_10004359
448 Ga0307513_10076180
449 Ga0307513_10253201
450 Ga0307509_10021695
451 Ga0307408_100066018
452 Ga0307508_10003680
453 Ga0307508_10059650
454 Ga0307516_10004696
455 Ga0307516_10013874
456 Ga0307516_10109499
457 Ga0307405_10002395
458 Ga0307405_10021209
459 Ga0307413_10002243
460 Ga0307413_10008611
461 Ga0326468_10000129
462 Ga0307406_10004663
463 Ga0307406_10059810
464 Ga0307406_10060921
465 Ga0307409_100000333
466 Ga0307409_100009504
467 Ga0307409_100074759
468 Ga0307416_100002364
469 Ga0307416_100015975
470 Ga0307411_10055836
471 Ga0307415_100000981
472 Ga0307415_100006413
473 Ga0307415_100055031
474 Ga0307415_100209424
475 Ga0307507_10000002
476 Ga0307507_10024353
477 Ga0373951_0000111
478 Ga0373923_0007390
479 Ga0373953_0004189
480 Ga0373955_0030167
481 Ga0373942_0000103
482 Ga0316574_0002480
483 Ga0373935_0003975
484 Ga0395899_0004292
485 Ga0395900_0005334
486 Ga0395898_0001725
487 Ga0395898_0098955
488 Ga0395905_0010411
489 Ga0395905_0119072
490 Ga0436364_0117376
491 Ga0436364_0988103
492 Ga0436364_1292056
493 Ga0395901_0001960
494 Ga0395901_0004529
495 Ga0395901_0020383
496 Ga0451791_0346095
497 Ga0451853_0056272
498 Ga0451853_0522836
499 Ga0466969_0006466
500 Ga0466969_0014645
501 Ga0466969_0018264
502 Ga0466969_0054642
503 Ga0466966_0011993
504 Ga0466961_0001146
505 Ga0466961_0022313
506 Ga0466961_0142398
507 Ga0466971_0001486
508 Ga0466970_0019285
509 Ga0466970_0080570
510 Ga0466959_0001641
511 Ga0466959_0005691
512 Ga0466959_0136740
513 Ga0495592_0026669
514 Ga0495592_0138729
515 Ga0495603_0001203
516 Ga0495629_0001004
517 Ga0495651_0001278
518 Ga0495651_0005420
519 Ga0495651_0172406
520 Ga0495606_0001892
521 Ga0495608_0063152
522 Ga0495628_0004964
523 Ga0495632_0047763
524 Ga0495652_0002845
525 Ga0495652_0016525
526 Ga0495652_0037477
527 Ga0495652_0101935
528 Ga0495587_0017759
529 Ga0495645_0002774
530 Ga0495622_0025275
531 Ga0495668_0000199
532 Ga0495625_0000457
533 Ga0495635_0001108
534 Ga0495635_0008065
535 Ga0495646_0035993
536 Ga0495613_0000812
537 Ga0495600_0026081
538 Ga0495581_0091262
539 Ga0495581_0142796
540 Ga0495604_0012546
541 Ga0495676_0003047
542 Ga0495680_0010284
543 Ga0495602_0042491
544 Ga0495614_0022805
545 Ga0495626_0000059
546 Ga0496102_0004290
547 Ga0496103_0024632
548 Ga0496104_0028696
549 Ga0496104_0224395
550 Ga0496105_0022821
551 Ga0496105_0064719
552 Ga0496108_0000196
553 Ga0496108_0001314
554 Ga0496108_0009802
555 Ga0496109_0033071
556 Ga0496109_0158154
557 Ga0496110_0000656
558 Ga0496110_0026949
559 Ga0496111_0000929
560 Ga0496111_0001201
561 Ga0496112_0008209
562 Ga0496113_0017886
563 Ga0496113_0018277
564 Ga0496113_0068199
565 Ga0496114_0001238
566 Ga0496114_0109033
567 Ga0496114_0111036
568 Ga0501031_0015473
569 Ga0501036_0010175
570 Ga0501036_0103857
571 Ga0501037_0090079
572 Ga0501039_0056021
573 Ga0501040_0139917
574 Ga0501041_0048370
575 Ga0501043_0174943
576 Ga0501046_0086308
577 Ga0501046_0090326
578 Ga0501047_0048065
579 Ga0501071_0032561
580 Ga0501072_0038890
581 Ga0501074_0040837
582 Ga0501074_0117458
583 Ga0501080_0044497
584 nmdc:mga05p37_17512_c1
585 nmdc:mga05p37_24296_c1
586 nmdc:mga05p37_378865_c1
587 nmdc:mga05p37_45748_c1
588 nmdc:mga09592_130772_c1
589 nmdc:mga09592_131_c4
590 nmdc:mga09592_68943_c1
591 nmdc:mga0qj67_125973_c1
592 nmdc:mga0qj67_168592_c1
593 nmdc:mga0qj67_183_c3
594 nmdc:mga0qj67_22643_c1
595 nmdc:mga0qj67_4066_c1
596 nmdc:mga06r32_32995_c1
597 nmdc:mga06r32_417_c1
598 nmdc:mga06r32_57730_c1
599 nmdc:mga08y16_11202_c1
600 Ga0495601_0012761
601 Ga0495601_0022734
602 Ga0495601_0050220
603 Ga0495612_0000777
604 Ga0500646_0014841
605 Ga0500651_0022097
606 Ga0500641_0023281
607 Ga0500569_005572
608 Ga0500594_0007884
609 Ga0500652_017526
610 Ga0500588_0000347
611 Ga0500600_0039419
612 Ga0501082_0063681
613 Ga0466962_0001105
614 Ga0466962_0001370
615 Ga0530510_0045265
616 2501944862
617 2515498203
618 2515721853
619 2515759424
620 2516084207
621 2516092286
622 2623585763
623 2643763154
624 2643900167
625 2644405609
626 2644463976
627 2676482989
628 2739205780
629 2753269723
630 2772642836
631 2819697322
632 2831938176
633 2832005337
634 2842892356
635 2855675120
636 2855679769
637 2855688029
638 2856859646
639 2857294411
640 2858854698
641 2858869487
642 2858885241
643 2858891892
644 2858899671
645 2858904911
646 2866071454
647 2867304711
648 2867318721
649 2867323963
650 2867509979
651 2868089924
652 2869052009
653 2869067467
654 2869074761
655 2880494470
656 2880497834
657 2887484452
658 2902588517
659 2929226399
660 2929233103
661 2946049466
662 2990061610
663 2996222825
664 649816354
665 8001789654
666 8003831916
667 8003860101
668 8003876153
669 8025484259
670 8054709584
671 8054729109
672 8054740472
673 8055413081
674 8056452950

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01743

PolyA_pol

Poly A polymerase head domain

119

243

0.98

PF12627

PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

270

332

0.97

PF01966

HD

HD domain

345

464

0.88

Map