F413257

General Info

Members Datasets Scaffolds Average Seq Length
337 224 674 283

Family's Representative Sequence

Representative Sequence 3300049583|Ga0501067_0127497|Ga0501067_0127497_364_1371
Length 315
Sequence MPFYPARDLWSIGDHRWVAVGTCRAASDRQEEVPVSETSAAPVRRIRITDFQNAKRNGERWAMLTSYDQYTATIFDDAGVWALLVGDSAANNVLGYDTTLPVTVDELLPLVRAVARSARRAFVIGDLPFGSYEEGPSQALETSIRFMKEGGCHAVKFEGGVRVAKQIRKVTQAGVPVMAHIGFTPQSEHQLGGYRVQGRGDGAERLLADAHAVEDAGAFAVVLEMVPGDLAKQVTAELEIPTVGIGAGPDCDAQVLVWQDMAGLRQGKLQRFVKRYANLAQVLGDAASSYVDDVRTGAFPTAEHTFPLTSERSLP

Samples

Sample ID Description Type Environment
1 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300012473 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610 Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
120 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
121 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
122 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
123 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
124 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
125 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
126 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
134 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
135 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
136 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
137 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
138 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
139 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
142 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
143 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
144 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
145 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
154 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
176 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
178 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
179 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
180 2501939600 Micromonospora sp. L5 Isolate Unclassified
181 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
182 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
183 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
184 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
185 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
186 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
187 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
188 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
189 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
190 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
191 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
192 2855683550 Micromonospora sp. RP3T Isolate Unclassified
193 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
194 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
195 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
196 2858868258 Micromonospora sp. MH33 Isolate Unclassified
197 2858882152 Micromonospora noduli MED15 Isolate Nodule
198 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
199 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
200 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
201 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
202 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
203 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
204 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
205 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
206 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
207 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
208 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
209 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
210 2880230671 Pseudomonas fluorescens LBUM677 Isolate Unclassified
211 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
212 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
213 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
214 2902582711 Micromonospora sp. AP08 Isolate Unclassified
215 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
216 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
217 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
218 649633069 Micromonospora sp. L5 Isolate Unclassified
219 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
220 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
221 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
222 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
223 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
224 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.16
Metatranscriptomes 1.48
Isolates 13.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.19
Nodule 1.78
Rhizoplane 2.67
Rhizosphere 81.31
Stem 0
Stem Tuber 0.3
Unclassified 0.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501067_0127497 3300049583 Bacteria 1416
2 Ga0070658_10008554 3300005327 Bacteria 8228
3 Ga0068868_100195753 3300005338 Bacteria 1683
4 Ga0070691_10208507 3300005341 Bacteria 1030
5 Ga0070692_10191076 3300005345 Bacteria 1193
6 Ga0070668_100025240 3300005347 Bacteria 4504
7 Ga0070668_100079247 3300005347 Bacteria 2571
8 Ga0070668_100230533 3300005347 Bacteria 1531
9 Ga0070669_100221150 3300005353 Bacteria 1497
10 Ga0070674_100015124 3300005356 Bacteria 4811
11 Ga0070659_100029266 3300005366 Bacteria 4257
12 Ga0070659_100091727 3300005366 Bacteria 2435
13 Ga0070705_100045626 3300005440 Bacteria 2522
14 Ga0070705_100391019 3300005440 Bacteria 1027
15 Ga0070663_100001194 3300005455 Bacteria 14276
16 Ga0070678_100142385 3300005456 Bacteria 1920
17 Ga0070662_100006948 3300005457 Bacteria 7324
18 Ga0070662_100076125 3300005457 Bacteria 2487
19 Ga0070681_10023228 3300005458 Bacteria 6235
20 Ga0070681_10164739 3300005458 Bacteria 2140
21 Ga0070707_100073311 3300005468 Bacteria 3301
22 Ga0070699_100144370 3300005518 Bacteria 2103
23 Ga0070679_100004318 3300005530 Bacteria 13121
24 Ga0070679_100083406 3300005530 Bacteria 3185
25 Ga0068853_100145192 3300005539 Bacteria 2132
26 Ga0070696_100000862 3300005546 Bacteria 19597
27 Ga0070704_100281750 3300005549 Unclassified 1377
28 Ga0070664_100118206 3300005564 Bacteria 2319
29 Ga0068857_100214512 3300005577 Bacteria 1757
30 Ga0068857_100231290 3300005577 Bacteria 1691
31 Ga0068857_100695335 3300005577 Bacteria 966
32 Ga0068854_100061022 3300005578 Bacteria 2730
33 Ga0068854_100217557 3300005578 Bacteria 1510
34 Ga0070702_100043776 3300005615 Bacteria 2524
35 Ga0068852_100060905 3300005616 Bacteria 3278
36 Ga0068864_100044434 3300005618 Bacteria 3808
37 Ga0068866_10005192 3300005718 Bacteria 5365
38 Ga0068861_100030162 3300005719 Bacteria 3972
39 Ga0068863_100015804 3300005841 Bacteria 7241
40 Ga0068863_100387938 3300005841 Bacteria 1364
41 Ga0068860_100404534 3300005843 Bacteria 1351
42 Ga0081455_10001034 3300005937 Bacteria 35141
43 Ga0081455_10021482 3300005937 Bacteria 6054
44 Ga0081540_1054264 3300005983 Bacteria 1960
45 Ga0081539_10000202 3300005985 Bacteria 138350
46 Ga0081539_10001613 3300005985 Bacteria 37093
47 Ga0081539_10010562 3300005985 Bacteria 7471
48 Ga0075432_10000048 3300006058 Bacteria 23251
49 Ga0075432_10003278 3300006058 Bacteria 5469
50 Ga0075428_100002835 3300006844 Bacteria 18894
51 Ga0075428_100004280 3300006844 Bacteria 15712
52 Ga0075428_100023684 3300006844 Bacteria 6795
53 Ga0075428_100040059 3300006844 Bacteria 5156
54 Ga0075428_100129291 3300006844 Bacteria 2748
55 Ga0075430_100001085 3300006846 Bacteria 21588
56 Ga0075430_100034587 3300006846 Bacteria 4289
57 Ga0075430_100047144 3300006846 Bacteria 3638
58 Ga0075431_100014447 3300006847 Bacteria 7987
59 Ga0075431_100023261 3300006847 Bacteria 6339
60 Ga0075431_100026012 3300006847 Bacteria 5999
61 Ga0075433_10000626 3300006852 Bacteria 23573
62 Ga0075433_10000943 3300006852 Bacteria 20527
63 Ga0075434_100000012 3300006871 Bacteria 83539
64 Ga0075434_100000507 3300006871 Bacteria 29488
65 Ga0075434_100490471 3300006871 Bacteria 1249
66 Ga0075429_100001941 3300006880 Bacteria 17166
67 Ga0075429_100008736 3300006880 Bacteria 8809
68 Ga0075429_100033295 3300006880 Bacteria 4477
69 Ga0075429_100170174 3300006880 Bacteria 1908
70 Ga0075429_100402420 3300006880 Bacteria 1199
71 Ga0068865_100005786 3300006881 Bacteria 7513
72 Ga0075435_100000587 3300007076 Bacteria 22225
73 Ga0111539_10005543 3300009094 Bacteria 16323
74 Ga0111539_10005846 3300009094 Bacteria 15903
75 Ga0105245_10104961 3300009098 Bacteria 2620
76 Ga0105245_10126596 3300009098 Bacteria 2392
77 Ga0105245_10150887 3300009098 Bacteria 2198
78 Ga0105245_10337311 3300009098 Bacteria 1490
79 Ga0114129_10000930 3300009147 Bacteria 38246
80 Ga0114129_10001855 3300009147 Bacteria 28806
81 Ga0114129_10002761 3300009147 Bacteria 24458
82 Ga0114129_10009536 3300009147 Bacteria 13849
83 Ga0114129_10051079 3300009147 Bacteria 5806
84 Ga0114129_10282670 3300009147 Bacteria 2216
85 Ga0105243_10008345 3300009148 Bacteria 7954
86 Ga0105242_10003485 3300009176 Bacteria 12227
87 Ga0105248_10112241 3300009177 Bacteria 3074
88 Ga0105238_10050041 3300009551 Bacteria 4207
89 Ga0105238_10168715 3300009551 Bacteria 2165
90 Ga0105249_10012777 3300009553 Bacteria 7405
91 Ga0105249_10041466 3300009553 Bacteria 4184
92 Ga0105239_10028946 3300010375 Bacteria 6089
93 Ga0157340_1001702 3300012473 Bacteria 1047
94 Ga0157369_10006941 3300013105 Bacteria 13070
95 Ga0157369_10094389 3300013105 Bacteria 3193
96 Ga0163162_10004376 3300013306 Bacteria 13599
97 Ga0163162_10023482 3300013306 Bacteria 6085
98 Ga0157372_10022440 3300013307 Bacteria 6831
99 Ga0163163_10026620 3300014325 Bacteria 5531
100 Ga0163163_10034822 3300014325 Bacteria 4880
101 Ga0157380_10036644 3300014326 Bacteria 3797
102 Ga0157379_10057190 3300014968 Bacteria 3485
103 Ga0157376_10604159 3300014969 Bacteria 1092
104 Ga0163161_10019787 3300017792 Bacteria 4723
105 Ga0197907_11117757 3300020069 Bacteria 2062
106 Ga0206354_10751430 3300020081 Bacteria 935
107 Ga0206353_10237087 3300020082 Bacteria 1718
108 Ga0206353_11509240 3300020082 Bacteria 1256
109 Ga0224712_10205759 3300022467 Bacteria 896
110 Ga0209563_100793 3300025230 Bacteria 9519
111 Ga0207642_10071486 3300025899 Bacteria 1653
112 Ga0207688_10005779 3300025901 Bacteria 6735
113 Ga0207688_10119050 3300025901 Bacteria 1539
114 Ga0207705_10015196 3300025909 Bacteria 5531
115 Ga0207693_10054869 3300025915 Bacteria 3126
116 Ga0207657_10143134 3300025919 Bacteria 1952
117 Ga0207657_10354049 3300025919 Bacteria 1158
118 Ga0207652_10025246 3300025921 Bacteria 4938
119 Ga0207652_10062496 3300025921 Bacteria 3218
120 Ga0207652_10511481 3300025921 Bacteria 1081
121 Ga0207646_10013977 3300025922 Bacteria 7644
122 Ga0207681_10356477 3300025923 Bacteria 1172
123 Ga0207687_10064597 3300025927 Bacteria 2596
124 Ga0207687_10390300 3300025927 Bacteria 1143
125 Ga0207690_10002958 3300025932 Bacteria 10230
126 Ga0207690_10033393 3300025932 Bacteria 3308
127 Ga0207690_10102360 3300025932 Bacteria 2048
128 Ga0207706_10030047 3300025933 Bacteria 4849
129 Ga0207706_10196849 3300025933 Bacteria 1768
130 Ga0207709_10041959 3300025935 Bacteria 2749
131 Ga0207704_10005157 3300025938 Bacteria 6016
132 Ga0207704_10169415 3300025938 Bacteria 1564
133 Ga0207711_10042070 3300025941 Bacteria 3892
134 Ga0207689_10165408 3300025942 Bacteria 1823
135 Ga0207712_10055067 3300025961 Bacteria 2796
136 Ga0207668_10011291 3300025972 Bacteria 5421
137 Ga0207668_10139809 3300025972 Bacteria 1860
138 Ga0207668_10212533 3300025972 Bacteria 1548
139 Ga0207678_10000391 3300026067 Bacteria 39957
140 Ga0207678_10252631 3300026067 Bacteria 1510
141 Ga0207708_10201805 3300026075 Bacteria 1587
142 Ga0207641_10143999 3300026088 Bacteria 2153
143 Ga0207641_10155494 3300026088 Bacteria 2074
144 Ga0207676_10041056 3300026095 Bacteria 3549
145 Ga0207674_10108877 3300026116 Bacteria 2747
146 Ga0207674_10327303 3300026116 Bacteria 1482
147 Ga0207675_100082558 3300026118 Bacteria 3014
148 Ga0207675_100199179 3300026118 Bacteria 1923
149 Ga0207683_10304015 3300026121 Bacteria 1459
150 Ga0207428_10000714 3300027907 Bacteria 38345
151 Ga0207428_10018459 3300027907 Bacteria 5957
152 Ga0268264_10540976 3300028381 Bacteria 1141
153 Ga0307517_10031051 3300028786 Bacteria 6235
154 Ga0307515_10011644 3300028794 Bacteria 16667
155 Ga0307512_10002270 3300030522 Bacteria 24884
156 Ga0307512_10009800 3300030522 Bacteria 9200
157 Ga0307513_10006416 3300031456 Bacteria 15376
158 Ga0307408_100001171 3300031548 Bacteria 19914
159 Ga0307408_100007127 3300031548 Bacteria 7399
160 Ga0307408_100184275 3300031548 Bacteria 1677
161 Ga0307408_100233645 3300031548 Bacteria 1507
162 Ga0307508_10008725 3300031616 Bacteria 9357
163 Ga0307514_10296126 3300031649 Bacteria 911
164 Ga0307405_10000566 3300031731 Bacteria 14100
165 Ga0307405_10005498 3300031731 Bacteria 6117
166 Ga0307405_10088953 3300031731 Bacteria 2039
167 Ga0307405_10363374 3300031731 Bacteria 1121
168 Ga0307413_10000130 3300031824 Bacteria 19740
169 Ga0307413_10051143 3300031824 Bacteria 2488
170 Ga0307518_10079568 3300031838 Bacteria 2367
171 Ga0307410_10001813 3300031852 Bacteria 9911
172 Ga0307410_10006313 3300031852 Bacteria 6386
173 Ga0326468_10000215 3300031889 Bacteria 5987
174 Ga0307406_10003738 3300031901 Bacteria 8276
175 Ga0307406_10027871 3300031901 Bacteria 3408
176 Ga0307406_10054784 3300031901 Bacteria 2546
177 Ga0307406_10172702 3300031901 Bacteria 1566
178 Ga0307407_10001515 3300031903 Bacteria 8499
179 Ga0307407_10008461 3300031903 Bacteria 4727
180 Ga0307412_10182358 3300031911 Bacteria 1580
181 Ga0307412_10255475 3300031911 Bacteria 1363
182 Ga0307409_100000166 3300031995 Bacteria 25619
183 Ga0307409_100001018 3300031995 Bacteria 13137
184 Ga0307409_100010750 3300031995 Bacteria 5716
185 Ga0307409_100169215 3300031995 Bacteria 1921
186 Ga0307409_100256155 3300031995 Bacteria 1603
187 Ga0307409_100511310 3300031995 Bacteria 1171
188 Ga0307416_100030935 3300032002 Bacteria 4023
189 Ga0307416_100093199 3300032002 Bacteria 2594
190 Ga0307414_10002998 3300032004 Bacteria 8946
191 Ga0307414_10020496 3300032004 Bacteria 4122
192 Ga0307411_10003467 3300032005 Bacteria 7323
193 Ga0307411_10080158 3300032005 Bacteria 2244
194 Ga0307411_10128305 3300032005 Bacteria 1849
195 Ga0307415_100000006 3300032126 Bacteria 107919
196 Ga0307415_100025829 3300032126 Bacteria 3694
197 Ga0307415_100068237 3300032126 Bacteria 2488
198 Ga0307415_100076634 3300032126 Bacteria 2371
199 Ga0307415_100171544 3300032126 Bacteria 1692
200 Ga0307415_100190310 3300032126 Bacteria 1619
201 Ga0307510_10162523 3300033180 Bacteria 1827
202 Ga0373951_0000236 3300035091 Bacteria 18702
203 Ga0373947_0097455 3300035725 Bacteria 1843
204 Ga0395899_0007682 3300037312 Bacteria 8313
205 Ga0395900_0003208 3300037418 Bacteria 17709
206 Ga0395898_0019824 3300037466 Bacteria 6839
207 Ga0395901_0005412 3300038443 Bacteria 12915
208 Ga0451847_0297197 3300041503 Bacteria 1035
209 Ga0451853_3611997 3300041512 Bacteria 5608
210 Ga0439448_0001754 3300042005 Bacteria 5733
211 Ga0439448_0087750 3300042005 Bacteria 1049
212 Ga0439450_063023 3300042008 Bacteria 899
213 Ga0439463_003506 3300042016 Bacteria 3963
214 Ga0450888_006617 3300042126 Bacteria 1264
215 Ga0439444_0013965 3300042437 Bacteria 1337
216 Ga0439440_0013177 3300042993 Bacteria 1768
217 Ga0439440_0041440 3300042993 Bacteria 1123
218 Ga0466961_0008750 3300044693 Bacteria 6456
219 Ga0466968_0030296 3300044735 Bacteria 2241
220 Ga0466959_0140018 3300045049 Bacteria 1711
221 Ga0466958_0289942 3300045836 Bacteria 1050
222 Ga0466967_0442891 3300045976 Bacteria 1269
223 Ga0495629_0226460 3300046459 Bacteria 1289
224 Ga0495605_0069914 3300046474 Bacteria 1661
225 Ga0495594_0054670 3300046499 Bacteria 2200
226 Ga0495607_0002203 3300046501 Bacteria 16144
227 Ga0495620_0036849 3300046515 Bacteria 2184
228 Ga0495632_0151926 3300046519 Bacteria 1070
229 Ga0495637_0061731 3300046520 Bacteria 1536
230 Ga0495598_0026189 3300046537 Bacteria 1597
231 Ga0495645_0345073 3300046543 Bacteria 961
232 Ga0495656_0027488 3300046615 Bacteria 2273
233 Ga0495588_0044012 3300046674 Bacteria 2285
234 Ga0495670_0054608 3300046691 Bacteria 2002
235 Ga0495670_0265026 3300046691 Bacteria 917
236 Ga0495660_0128916 3300046810 Bacteria 1271
237 Ga0495672_0033913 3300047320 Bacteria 3160
238 Ga0496104_0011842 3300048907 Bacteria 7827
239 Ga0496108_0247278 3300048911 Bacteria 1551
240 Ga0496109_0044412 3300048912 Bacteria 4031
241 Ga0496109_0174301 3300048912 Bacteria 2019
242 Ga0496110_0015897 3300048913 Bacteria 6275
243 Ga0496112_0015047 3300048915 Bacteria 7202
244 Ga0496112_0032111 3300048915 Bacteria 5096
245 Ga0496112_0158920 3300048915 Bacteria 2226
246 Ga0496112_0228124 3300048915 Bacteria 1817
247 Ga0496117_0000596 3300048920 Bacteria 59494
248 Ga0496118_0000345 3300048921 Bacteria 78809
249 Ga0496124_0006141 3300048927 Bacteria 13179
250 Ga0501031_0045999 3300049568 Bacteria 2848
251 Ga0501039_0093133 3300049575 Bacteria 2348
252 Ga0501040_0166565 3300049576 Bacteria 1559
253 Ga0501041_0042813 3300049577 Bacteria 2752
254 Ga0501071_0074566 3300049587 Bacteria 2476
255 Ga0501074_0223375 3300049590 Bacteria 1341
256 Ga0501077_0060268 3300049593 Bacteria 2409
257 Ga0501077_0138345 3300049593 Bacteria 1544
258 Ga0501079_0120781 3300049741 Bacteria 2038
259 Ga0501083_0166382 3300049744 Bacteria 1441
260 Ga0501271_008183 3300049768 Bacteria 1068
261 Ga0501045_0057606 3300049824 Bacteria 2843
262 nmdc:mga05p37_1734_c1 3300050507 Bacteria 25449
263 nmdc:mga05p37_24525_c1 3300050507 Bacteria 7332
264 nmdc:mga05p37_284_c1 3300050507 Bacteria 52993
265 nmdc:mga05p37_67972_c1 3300050507 Bacteria 4383
266 nmdc:mga05p37_741777_c1 3300050507 Bacteria 1084
267 nmdc:mga05p37_80968_c1 3300050507 Bacteria 4000
268 nmdc:mga09592_171573_c1 3300050508 Bacteria 1876
269 nmdc:mga09592_23_c1 3300050508 Bacteria 75837
270 nmdc:mga09592_44961_c1 3300050508 Bacteria 3719
271 nmdc:mga0qj67_132712_c1 3300050509 Bacteria 2017
272 nmdc:mga0qj67_443_c1 3300050509 Bacteria 28269
273 nmdc:mga0qj67_47135_c1 3300050509 Bacteria 3404
274 nmdc:mga0qj67_746_c2 3300050509 Bacteria 20755
275 nmdc:mga06r32_1800_c1 3300050510 Bacteria 19198
276 nmdc:mga06r32_180892_c2 3300050510 Bacteria 1197
277 nmdc:mga06r32_2390_c1 3300050510 Bacteria 16800
278 nmdc:mga06r32_496347_c1 3300050510 Bacteria 1198
279 nmdc:mga08y16_21514_c1 3300050511 Bacteria 6810
280 nmdc:mga0n895_469954_c1 3300050512 Bacteria 1269
281 nmdc:mga0n895_660_c1 3300050512 Bacteria 24119
282 nmdc:mga0n895_974_c1 3300050512 Bacteria 20780
283 nmdc:mga0rr50_2302_c1 3300050513 Bacteria 10711
284 nmdc:mga0a205_464_c1 3300050515 Bacteria 31532
285 nmdc:mga0a205_504_c1 3300050515 Bacteria 30621
286 Ga0495655_0085451 3300053083 Bacteria 910
287 Ga0500644_0007199 3300053088 Bacteria 2888
288 Ga0500650_0055001 3300053098 Bacteria 1853
289 Ga0500600_0031179 3300053149 Bacteria 3133
290 Ga0501084_0064293 3300054114 Bacteria 3071
291 Ga0501082_0286266 3300060353 Bacteria 1435
292 Ga0530510_0108287 3300061734 Bacteria 2034
293 2501943943 2501939600 Bacteria 6907073
294 2515495008 2515154088 Bacteria 5526283
295 2515755037 2515154137 Bacteria 5711575
296 2516088679 2515154203 Bacteria 5458536
297 2623590975 2622736626 Bacteria 7181580
298 2676483373 2675903059 Bacteria 8644972
299 2772644080 2772190715 Bacteria 6959372
300 2809586750 2808606522 Bacteria 9488490
301 2831936432 2831935698 Bacteria 5963223
302 2832005602 2832004796 Bacteria 6538017
303 2855672522 2855670206 Bacteria 7120389
304 2855681426 2855676851 Bacteria 7063653
305 2855687807 2855683550 Bacteria 7134265
306 2856864641 2856858025 Bacteria 7255264
307 2857290345 2857288857 Bacteria 7189066
308 2858849906 2858848962 Bacteria 6963058
309 2858870421 2858868258 Bacteria 7683772
310 2858886338 2858882152 Bacteria 7230291
311 2858894081 2858888857 Bacteria 7060307
312 2858902492 2858895516 Bacteria 7378898
313 2858905903 2858902515 Bacteria 7086037
314 2863071732 2863067949 Bacteria 8541735
315 2866066151 2866065130 Bacteria 6518152
316 2867303381 2867302475 Bacteria 7087181
317 2867316256 2867312974 Bacteria 7058875
318 2867321121 2867319477 Bacteria 7069771
319 2867510943 2867507094 Bacteria 6506033
320 2869051961 2869048445 Bacteria 6875584
321 2869067113 2869061728 Bacteria 7112407
322 2869072842 2869068681 Bacteria 7205615
323 2880233130 2880230671 Bacteria 6140320
324 2880489542 2880489317 Bacteria 7096270
325 2880496163 2880495981 Bacteria 7340502
326 2899372705 2899370129 Bacteria 6781179
327 2902588130 2902582711 Bacteria 6187705
328 2929224839 2929219909 Bacteria 6984360
329 2929232223 2929226422 Bacteria 7248583
330 2996226482 2996221748 Bacteria 6799777
331 649813834 649633069 Bacteria 6962533
332 8003833182 8003830390 Bacteria 6541657
333 8003876384 8003870546 Bacteria 7396674
334 8054708235 8054704163 Bacteria 7247792
335 8054731247 8054727385 Bacteria 7558670
336 8054739841 8054734606 Bacteria 6947278
337 8055415040 8055412473 Bacteria 6257500
338 Ga0501067_0127497
339 Ga0070658_10008554
340 Ga0068868_100195753
341 Ga0070691_10208507
342 Ga0070692_10191076
343 Ga0070668_100025240
344 Ga0070668_100079247
345 Ga0070668_100230533
346 Ga0070669_100221150
347 Ga0070674_100015124
348 Ga0070659_100029266
349 Ga0070659_100091727
350 Ga0070705_100045626
351 Ga0070705_100391019
352 Ga0070663_100001194
353 Ga0070678_100142385
354 Ga0070662_100006948
355 Ga0070662_100076125
356 Ga0070681_10023228
357 Ga0070681_10164739
358 Ga0070707_100073311
359 Ga0070699_100144370
360 Ga0070679_100004318
361 Ga0070679_100083406
362 Ga0068853_100145192
363 Ga0070696_100000862
364 Ga0070704_100281750
365 Ga0070664_100118206
366 Ga0068857_100214512
367 Ga0068857_100231290
368 Ga0068857_100695335
369 Ga0068854_100061022
370 Ga0068854_100217557
371 Ga0070702_100043776
372 Ga0068852_100060905
373 Ga0068864_100044434
374 Ga0068866_10005192
375 Ga0068861_100030162
376 Ga0068863_100015804
377 Ga0068863_100387938
378 Ga0068860_100404534
379 Ga0081455_10001034
380 Ga0081455_10021482
381 Ga0081540_1054264
382 Ga0081539_10000202
383 Ga0081539_10001613
384 Ga0081539_10010562
385 Ga0075432_10000048
386 Ga0075432_10003278
387 Ga0075428_100002835
388 Ga0075428_100004280
389 Ga0075428_100023684
390 Ga0075428_100040059
391 Ga0075428_100129291
392 Ga0075430_100001085
393 Ga0075430_100034587
394 Ga0075430_100047144
395 Ga0075431_100014447
396 Ga0075431_100023261
397 Ga0075431_100026012
398 Ga0075433_10000626
399 Ga0075433_10000943
400 Ga0075434_100000012
401 Ga0075434_100000507
402 Ga0075434_100490471
403 Ga0075429_100001941
404 Ga0075429_100008736
405 Ga0075429_100033295
406 Ga0075429_100170174
407 Ga0075429_100402420
408 Ga0068865_100005786
409 Ga0075435_100000587
410 Ga0111539_10005543
411 Ga0111539_10005846
412 Ga0105245_10104961
413 Ga0105245_10126596
414 Ga0105245_10150887
415 Ga0105245_10337311
416 Ga0114129_10000930
417 Ga0114129_10001855
418 Ga0114129_10002761
419 Ga0114129_10009536
420 Ga0114129_10051079
421 Ga0114129_10282670
422 Ga0105243_10008345
423 Ga0105242_10003485
424 Ga0105248_10112241
425 Ga0105238_10050041
426 Ga0105238_10168715
427 Ga0105249_10012777
428 Ga0105249_10041466
429 Ga0105239_10028946
430 Ga0157340_1001702
431 Ga0157369_10006941
432 Ga0157369_10094389
433 Ga0163162_10004376
434 Ga0163162_10023482
435 Ga0157372_10022440
436 Ga0163163_10026620
437 Ga0163163_10034822
438 Ga0157380_10036644
439 Ga0157379_10057190
440 Ga0157376_10604159
441 Ga0163161_10019787
442 Ga0197907_11117757
443 Ga0206354_10751430
444 Ga0206353_10237087
445 Ga0206353_11509240
446 Ga0224712_10205759
447 Ga0209563_100793
448 Ga0207642_10071486
449 Ga0207688_10005779
450 Ga0207688_10119050
451 Ga0207705_10015196
452 Ga0207693_10054869
453 Ga0207657_10143134
454 Ga0207657_10354049
455 Ga0207652_10025246
456 Ga0207652_10062496
457 Ga0207652_10511481
458 Ga0207646_10013977
459 Ga0207681_10356477
460 Ga0207687_10064597
461 Ga0207687_10390300
462 Ga0207690_10002958
463 Ga0207690_10033393
464 Ga0207690_10102360
465 Ga0207706_10030047
466 Ga0207706_10196849
467 Ga0207709_10041959
468 Ga0207704_10005157
469 Ga0207704_10169415
470 Ga0207711_10042070
471 Ga0207689_10165408
472 Ga0207712_10055067
473 Ga0207668_10011291
474 Ga0207668_10139809
475 Ga0207668_10212533
476 Ga0207678_10000391
477 Ga0207678_10252631
478 Ga0207708_10201805
479 Ga0207641_10143999
480 Ga0207641_10155494
481 Ga0207676_10041056
482 Ga0207674_10108877
483 Ga0207674_10327303
484 Ga0207675_100082558
485 Ga0207675_100199179
486 Ga0207683_10304015
487 Ga0207428_10000714
488 Ga0207428_10018459
489 Ga0268264_10540976
490 Ga0307517_10031051
491 Ga0307515_10011644
492 Ga0307512_10002270
493 Ga0307512_10009800
494 Ga0307513_10006416
495 Ga0307408_100001171
496 Ga0307408_100007127
497 Ga0307408_100184275
498 Ga0307408_100233645
499 Ga0307508_10008725
500 Ga0307514_10296126
501 Ga0307405_10000566
502 Ga0307405_10005498
503 Ga0307405_10088953
504 Ga0307405_10363374
505 Ga0307413_10000130
506 Ga0307413_10051143
507 Ga0307518_10079568
508 Ga0307410_10001813
509 Ga0307410_10006313
510 Ga0326468_10000215
511 Ga0307406_10003738
512 Ga0307406_10027871
513 Ga0307406_10054784
514 Ga0307406_10172702
515 Ga0307407_10001515
516 Ga0307407_10008461
517 Ga0307412_10182358
518 Ga0307412_10255475
519 Ga0307409_100000166
520 Ga0307409_100001018
521 Ga0307409_100010750
522 Ga0307409_100169215
523 Ga0307409_100256155
524 Ga0307409_100511310
525 Ga0307416_100030935
526 Ga0307416_100093199
527 Ga0307414_10002998
528 Ga0307414_10020496
529 Ga0307411_10003467
530 Ga0307411_10080158
531 Ga0307411_10128305
532 Ga0307415_100000006
533 Ga0307415_100025829
534 Ga0307415_100068237
535 Ga0307415_100076634
536 Ga0307415_100171544
537 Ga0307415_100190310
538 Ga0307510_10162523
539 Ga0373951_0000236
540 Ga0373947_0097455
541 Ga0395899_0007682
542 Ga0395900_0003208
543 Ga0395898_0019824
544 Ga0395901_0005412
545 Ga0451847_0297197
546 Ga0451853_3611997
547 Ga0439448_0001754
548 Ga0439448_0087750
549 Ga0439450_063023
550 Ga0439463_003506
551 Ga0450888_006617
552 Ga0439444_0013965
553 Ga0439440_0013177
554 Ga0439440_0041440
555 Ga0466961_0008750
556 Ga0466968_0030296
557 Ga0466959_0140018
558 Ga0466958_0289942
559 Ga0466967_0442891
560 Ga0495629_0226460
561 Ga0495605_0069914
562 Ga0495594_0054670
563 Ga0495607_0002203
564 Ga0495620_0036849
565 Ga0495632_0151926
566 Ga0495637_0061731
567 Ga0495598_0026189
568 Ga0495645_0345073
569 Ga0495656_0027488
570 Ga0495588_0044012
571 Ga0495670_0054608
572 Ga0495670_0265026
573 Ga0495660_0128916
574 Ga0495672_0033913
575 Ga0496104_0011842
576 Ga0496108_0247278
577 Ga0496109_0044412
578 Ga0496109_0174301
579 Ga0496110_0015897
580 Ga0496112_0015047
581 Ga0496112_0032111
582 Ga0496112_0158920
583 Ga0496112_0228124
584 Ga0496117_0000596
585 Ga0496118_0000345
586 Ga0496124_0006141
587 Ga0501031_0045999
588 Ga0501039_0093133
589 Ga0501040_0166565
590 Ga0501041_0042813
591 Ga0501071_0074566
592 Ga0501074_0223375
593 Ga0501077_0060268
594 Ga0501077_0138345
595 Ga0501079_0120781
596 Ga0501083_0166382
597 Ga0501271_008183
598 Ga0501045_0057606
599 nmdc:mga05p37_1734_c1
600 nmdc:mga05p37_24525_c1
601 nmdc:mga05p37_284_c1
602 nmdc:mga05p37_67972_c1
603 nmdc:mga05p37_741777_c1
604 nmdc:mga05p37_80968_c1
605 nmdc:mga09592_171573_c1
606 nmdc:mga09592_23_c1
607 nmdc:mga09592_44961_c1
608 nmdc:mga0qj67_132712_c1
609 nmdc:mga0qj67_443_c1
610 nmdc:mga0qj67_47135_c1
611 nmdc:mga0qj67_746_c2
612 nmdc:mga06r32_1800_c1
613 nmdc:mga06r32_180892_c2
614 nmdc:mga06r32_2390_c1
615 nmdc:mga06r32_496347_c1
616 nmdc:mga08y16_21514_c1
617 nmdc:mga0n895_469954_c1
618 nmdc:mga0n895_660_c1
619 nmdc:mga0n895_974_c1
620 nmdc:mga0rr50_2302_c1
621 nmdc:mga0a205_464_c1
622 nmdc:mga0a205_504_c1
623 Ga0495655_0085451
624 Ga0500644_0007199
625 Ga0500650_0055001
626 Ga0500600_0031179
627 Ga0501084_0064293
628 Ga0501082_0286266
629 Ga0530510_0108287
630 2501943943
631 2515495008
632 2515755037
633 2516088679
634 2623590975
635 2676483373
636 2772644080
637 2809586750
638 2831936432
639 2832005602
640 2855672522
641 2855681426
642 2855687807
643 2856864641
644 2857290345
645 2858849906
646 2858870421
647 2858886338
648 2858894081
649 2858902492
650 2858905903
651 2863071732
652 2866066151
653 2867303381
654 2867316256
655 2867321121
656 2867510943
657 2869051961
658 2869067113
659 2869072842
660 2880233130
661 2880489542
662 2880496163
663 2899372705
664 2902588130
665 2929224839
666 2929232223
667 2996226482
668 649813834
669 8003833182
670 8003876384
671 8054708235
672 8054731247
673 8054739841
674 8055415040

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02548

Pantoate_transf

Ketopantoate hydroxymethyltransferase

45

302

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1oy0-assembly1.cif.gz_A the crystal structure of the first enzyme of pantothenate biosynthetic pathway, ketopantoate hydroxymethyltransferase from mycobacterium tuberculosis shows a decameric assembly and terminal helix-swapping 0.9812 19 279
1oy0-assembly1.cif.gz_A the crystal structure of the first enzyme of pantothenate biosynthetic pathway, ketopantoate hydroxymethyltransferase from mycobacterium tuberculosis shows a decameric assembly and terminal helix-swapping 0.9734 19 279
1o66-assembly1.cif.gz_B crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.8792 20 276
1o66-assembly1.cif.gz_D crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.8734 22 279
3ez4-assembly1.cif.gz_I crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase from burkholderia pseudomallei 0.8732 20 281
ID Description Score Start End Superfamily
1oy0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9812 19 279 3.20.20.60
1oy0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9734 19 279 3.20.20.60
af_Q5ABB3_27_304_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.965 20 282 3.20.20.60
af_Q2FV21_2_270_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9641 23 282 3.20.20.60
af_Q9AWZ7_81_360_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9632 19 282 3.20.20.60
ID Description Score Start End GO Terms
AF-A0A3C1E1E7-F1-model_v4 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) 0.9963 28 146 GO:0000287
GO:0003864
GO:0005737
GO:0008168
GO:0015940
GO:0032259
AF-X1BK22-F1-model_v4 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) 0.9927 29 138 GO:0000287
GO:0003864
GO:0015940
AF-A0A535KN89-F1-model_v4 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) 0.9923 21 138 GO:0000287
GO:0003864
GO:0005737
GO:0008168
GO:0015940
GO:0032259
AF-A0A7X8AV40-F1-model_v4 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) 0.9919 19 138 GO:0000287
GO:0003864
GO:0005737
GO:0008168
GO:0015940
GO:0032259
AF-A0A535T109-F1-model_v4 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) 0.9906 21 155 GO:0000287
GO:0003864
GO:0005737
GO:0008168
GO:0015940
GO:0032259

Map