F412503

General Info

Members Datasets Scaffolds Average Seq Length
336 188 672 553

Family's Representative Sequence

Representative Sequence 3300002155|JGI24033J26618_1000248|JGI24033J26618_10002486
Length 567
Sequence MAHGSTTTVPEDDFVITPTRPGEEKGTWSAVIQDLLFTVDHKKLGLMYIGSGLIFFVIAGLMAAAIRLQLAIPNAHFISPDVYNRFFTMHGTAMVFLVGMPIIFGMANYLVPIMIGARDMAFPRLNAFGFWMFFFSGWFLYFSYFAGPGLYNAGSAPDIGWFAYSPLTSKAFSRGHSSDYWTLALLASGVGSVATALNIIVTTISLRCKGMTLGRMPLFVWTFLVVAFLVILAIPPLSACQIMLILDRYLGAKFFDTQAGGSAILWQHFFWIFGHPEVYILILPGFAAMNEIVPVFSRKPIFGYPIMVGANVMIAFISLGVWAHHMFTVGMTSLGNSFFAISTMLVAVPTGIKIFNWIGTMYGGKIRFELPMLFCIAFLFQFLIAGLTGIMLSVAPFDWQLSDSYFVVAHFHYVLIGGLLFTIFAAIYFWYPKAFGRMLSHKLGMWHFVLFTLGFHLTFLPQHVSGFLGMPRRIYTYEAGRGWEAWNMMSSIGVIFQAAGIACFVWNLIYSYKKGKIAGDDPWDAWTLEWATTSPPPDYNFEKTPEVRSRRPLWDLKHPEDPDWKYE

Samples

Sample ID Description Type Environment
1 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
47 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
79 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
80 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
120 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
121 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
122 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
123 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
124 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
125 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
126 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
134 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
135 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
136 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
137 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
138 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
139 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
142 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
163 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
164 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
168 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
187 2718217752 Candidatus Xiphinematobacter sp. Idaho Grape Isolate Unclassified
188 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.11
Metatranscriptomes 0.3
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.3
Nodule 0
Rhizoplane 1.79
Rhizosphere 90.77
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000248 3300002155 Bacteria 6031
2 CNAas_1000451 3300000532 Bacteria 3958
3 JGI25406J46586_10003820 3300003203 Bacteria 7037
4 JGI25406J46586_10016344 3300003203 Bacteria 3096
5 JGI25405J52794_10002838 3300003911 Bacteria 3008
6 Ga0065704_10087069 3300005289 Bacteria 3058
7 Ga0065707_10006584 3300005295 Bacteria 2687
8 Ga0065707_10106179 3300005295 Bacteria 2608
9 Ga0070683_100081929 3300005329 Bacteria 3021
10 Ga0070670_100105593 3300005331 Bacteria 2427
11 Ga0070670_100137537 3300005331 Bacteria 2111
12 Ga0068869_100014000 3300005334 Bacteria 5350
13 Ga0070680_100054120 3300005336 Bacteria 3276
14 Ga0070661_100000325 3300005344 Bacteria 38388
15 Ga0070661_100086323 3300005344 Bacteria 2320
16 Ga0070668_100000983 3300005347 Bacteria 19982
17 Ga0070668_100071383 3300005347 Bacteria 2705
18 Ga0070668_100116557 3300005347 Bacteria 2130
19 Ga0070669_100050540 3300005353 Bacteria 3037
20 Ga0070675_100006266 3300005354 Bacteria 9132
21 Ga0070675_100014725 3300005354 Bacteria 6169
22 Ga0070659_100027815 3300005366 Bacteria 4359
23 Ga0070659_100070390 3300005366 Bacteria 2779
24 Ga0070703_10000879 3300005406 Bacteria 9646
25 Ga0070711_100000001 3300005439 Bacteria 370591
26 Ga0070711_100120703 3300005439 Bacteria 1938
27 Ga0070694_100004411 3300005444 Bacteria 8462
28 Ga0070694_100009345 3300005444 Bacteria 6017
29 Ga0070708_100018266 3300005445 Bacteria 5867
30 Ga0070708_100054428 3300005445 Bacteria 3553
31 Ga0070662_100000224 3300005457 Bacteria 33436
32 Ga0068867_100011062 3300005459 Bacteria 6365
33 Ga0070706_100000180 3300005467 Bacteria 80488
34 Ga0070706_100001428 3300005467 Bacteria 25259
35 Ga0070706_100136939 3300005467 Bacteria 2285
36 Ga0070707_100010449 3300005468 Bacteria 8646
37 Ga0070707_100035108 3300005468 Bacteria 4782
38 Ga0070707_100037318 3300005468 Bacteria 4637
39 Ga0070698_100004735 3300005471 Bacteria 14946
40 Ga0070699_100002512 3300005518 Bacteria 16468
41 Ga0070699_100013619 3300005518 Bacteria 7001
42 Ga0070699_100019281 3300005518 Bacteria 5870
43 Ga0070699_100051163 3300005518 Bacteria 3576
44 Ga0070699_100063642 3300005518 Bacteria 3198
45 Ga0070679_100037385 3300005530 Bacteria 4822
46 Ga0070684_100099167 3300005535 Bacteria 2599
47 Ga0070697_100002278 3300005536 Bacteria 14728
48 Ga0070697_100010093 3300005536 Bacteria 7365
49 Ga0070697_100068950 3300005536 Bacteria 2896
50 Ga0070697_100089806 3300005536 Bacteria 2539
51 Ga0068853_100030059 3300005539 Bacteria 4586
52 Ga0068853_100079649 3300005539 Bacteria 2865
53 Ga0070672_100070928 3300005543 Bacteria 2770
54 Ga0070695_100012671 3300005545 Bacteria 5062
55 Ga0070695_100023862 3300005545 Bacteria 3765
56 Ga0070696_100004401 3300005546 Bacteria 9401
57 Ga0070696_100014914 3300005546 Bacteria 5218
58 Ga0070693_100016974 3300005547 Bacteria 3776
59 Ga0070665_100016088 3300005548 Bacteria 7506
60 Ga0070665_100034332 3300005548 Bacteria 5101
61 Ga0068855_100006423 3300005563 Bacteria 14313
62 Ga0070664_100056511 3300005564 Bacteria 3335
63 Ga0068856_100002431 3300005614 Bacteria 19158
64 Ga0068859_100086226 3300005617 Bacteria 3186
65 Ga0068864_100136853 3300005618 Bacteria 2206
66 Ga0068861_100010295 3300005719 Bacteria 6489
67 Ga0068870_10006249 3300005840 Bacteria 5243
68 Ga0068858_100112868 3300005842 Bacteria 2538
69 Ga0068858_100154870 3300005842 Bacteria 2156
70 Ga0068860_100010111 3300005843 Bacteria 9348
71 Ga0068862_100000841 3300005844 Bacteria 30209
72 Ga0081455_10002358 3300005937 Bacteria 22548
73 Ga0081455_10017318 3300005937 Bacteria 6915
74 Ga0081455_10024272 3300005937 Bacteria 5619
75 Ga0081538_10006839 3300005981 Bacteria 9940
76 Ga0081538_10009182 3300005981 Bacteria 8288
77 Ga0081538_10030972 3300005981 Bacteria 3619
78 Ga0081538_10039258 3300005981 Bacteria 3039
79 Ga0081540_1004360 3300005983 Bacteria 10822
80 Ga0081540_1048613 3300005983 Bacteria 2123
81 Ga0081539_10000021 3300005985 Bacteria 360643
82 Ga0081539_10000243 3300005985 Bacteria 127575
83 Ga0081539_10002374 3300005985 Bacteria 26942
84 Ga0081539_10007345 3300005985 Bacteria 10100
85 Ga0081539_10037714 3300005985 Bacteria 2875
86 Ga0070717_10068606 3300006028 Bacteria 2952
87 Ga0070716_100017647 3300006173 Bacteria 3704
88 Ga0075427_10001788 3300006194 Bacteria 2806
89 Ga0075428_100003347 3300006844 Bacteria 17541
90 Ga0075428_100011759 3300006844 Bacteria 9745
91 Ga0075428_100012834 3300006844 Bacteria 9321
92 Ga0075428_100101761 3300006844 Bacteria 3132
93 Ga0075428_100188418 3300006844 Bacteria 2232
94 Ga0075430_100059463 3300006846 Bacteria 3213
95 Ga0075430_100136022 3300006846 Bacteria 2047
96 Ga0075431_100056883 3300006847 Bacteria 4034
97 Ga0075431_100087945 3300006847 Bacteria 3206
98 Ga0075431_100088128 3300006847 Bacteria 3203
99 Ga0075431_100088299 3300006847 Bacteria 3199
100 Ga0075431_100174454 3300006847 Bacteria 2208
101 Ga0075433_10034801 3300006852 Bacteria 4328
102 Ga0075433_10038920 3300006852 Bacteria 4109
103 Ga0075433_10055418 3300006852 Bacteria 3461
104 Ga0075434_100000933 3300006871 Bacteria 23472
105 Ga0075434_100068566 3300006871 Bacteria 3534
106 Ga0075434_100102379 3300006871 Bacteria 2871
107 Ga0075434_100124605 3300006871 Bacteria 2594
108 Ga0075429_100010855 3300006880 Bacteria 7876
109 Ga0075429_100071014 3300006880 Bacteria 3031
110 Ga0075436_100114468 3300006914 Bacteria 1883
111 Ga0097620_100086229 3300006931 Bacteria 3186
112 Ga0075435_100008726 3300007076 Bacteria 7294
113 Ga0075435_100040147 3300007076 Bacteria 3736
114 Ga0075435_100048161 3300007076 Bacteria 3424
115 Ga0111539_10020628 3300009094 Bacteria 8116
116 Ga0111539_10037701 3300009094 Bacteria 5836
117 Ga0114129_10007027 3300009147 Bacteria 16028
118 Ga0114129_10007520 3300009147 Bacteria 15520
119 Ga0114129_10009635 3300009147 Bacteria 13780
120 Ga0114129_10012845 3300009147 Bacteria 11917
121 Ga0114129_10016020 3300009147 Bacteria 10662
122 Ga0114129_10019368 3300009147 Bacteria 9692
123 Ga0114129_10090367 3300009147 Bacteria 4245
124 Ga0114129_10211131 3300009147 Bacteria 2624
125 Ga0105243_10000657 3300009148 Bacteria 34272
126 Ga0105242_10004832 3300009176 Bacteria 10431
127 Ga0105242_10102630 3300009176 Bacteria 2426
128 Ga0105248_10055000 3300009177 Bacteria 4463
129 Ga0105249_10000653 3300009553 Bacteria 31473
130 Ga0157371_10059078 3300013102 Bacteria 2719
131 Ga0157370_10023244 3300013104 Bacteria 6156
132 Ga0157369_10051925 3300013105 Bacteria 4436
133 Ga0157369_10089284 3300013105 Bacteria 3291
134 Ga0157374_10004788 3300013296 Bacteria 11354
135 Ga0157374_10006565 3300013296 Bacteria 9877
136 Ga0157374_10007453 3300013296 Bacteria 9332
137 Ga0157374_10033010 3300013296 Bacteria 4720
138 Ga0157374_10117008 3300013296 Unclassified 2569
139 Ga0157374_10182739 3300013296 Bacteria 2049
140 Ga0157378_10028181 3300013297 Bacteria 4954
141 Ga0163162_10002044 3300013306 Bacteria 18979
142 Ga0163162_10002276 3300013306 Bacteria 18015
143 Ga0163162_10006309 3300013306 Bacteria 11480
144 Ga0163162_10019560 3300013306 Bacteria 6646
145 Ga0163162_10082602 3300013306 Bacteria 3285
146 Ga0157372_10163454 3300013307 Bacteria 2573
147 Ga0157375_10016110 3300013308 Bacteria 6704
148 Ga0157375_10043182 3300013308 Unclassified 4370
149 Ga0157375_10062830 3300013308 Bacteria 3691
150 Ga0163163_10000571 3300014325 Bacteria 32407
151 Ga0157379_10070346 3300014968 Bacteria 3131
152 Ga0163161_10033445 3300017792 Bacteria 3674
153 Ga0213872_10002725 3300021361 Bacteria 10151
154 Ga0213872_10041180 3300021361 Bacteria 2108
155 Ga0213876_10000089 3300021384 Bacteria 104386
156 Ga0213876_10002057 3300021384 Bacteria 11922
157 Ga0213876_10020446 3300021384 Bacteria 3498
158 Ga0213875_10000008 3300021388 Bacteria 533344
159 Ga0213875_10000041 3300021388 Bacteria 155792
160 Ga0213875_10001039 3300021388 Bacteria 19546
161 Ga0213875_10016570 3300021388 Bacteria 3571
162 Ga0213875_10018990 3300021388 Bacteria 3309
163 Ga0207697_10023370 3300025315 Bacteria 2531
164 Ga0207697_10035639 3300025315 Bacteria 2037
165 Ga0207653_10000120 3300025885 Bacteria 55535
166 Ga0207653_10001073 3300025885 Bacteria 8977
167 Ga0207682_10006480 3300025893 Bacteria 4710
168 Ga0207645_10007929 3300025907 Bacteria 7459
169 Ga0207643_10003589 3300025908 Bacteria 8355
170 Ga0207643_10009149 3300025908 Bacteria 5322
171 Ga0207684_10000388 3300025910 Bacteria 59094
172 Ga0207684_10001707 3300025910 Bacteria 23319
173 Ga0207684_10079762 3300025910 Bacteria 2784
174 Ga0207707_10014927 3300025912 Bacteria 6764
175 Ga0207693_10036075 3300025915 Bacteria 3897
176 Ga0207663_10000001 3300025916 Bacteria 591990
177 Ga0207663_10098018 3300025916 Bacteria 1962
178 Ga0207660_10020800 3300025917 Bacteria 4409
179 Ga0207657_10058639 3300025919 Bacteria 3311
180 Ga0207649_10000542 3300025920 Bacteria 26084
181 Ga0207652_10145642 3300025921 Bacteria 2120
182 Ga0207646_10003115 3300025922 Bacteria 19043
183 Ga0207646_10045866 3300025922 Bacteria 3922
184 Ga0207681_10002413 3300025923 Bacteria 11867
185 Ga0207681_10024854 3300025923 Bacteria 3847
186 Ga0207700_10156268 3300025928 Bacteria 1890
187 Ga0207690_10061674 3300025932 Bacteria 2550
188 Ga0207706_10000099 3300025933 Bacteria 90874
189 Ga0207706_10006476 3300025933 Bacteria 10871
190 Ga0207706_10054982 3300025933 Bacteria 3512
191 Ga0207686_10002533 3300025934 Bacteria 9918
192 Ga0207709_10002584 3300025935 Bacteria 11275
193 Ga0207665_10005185 3300025939 Bacteria 8699
194 Ga0207665_10070405 3300025939 Bacteria 2387
195 Ga0207691_10007229 3300025940 Bacteria 10711
196 Ga0207711_10120996 3300025941 Bacteria 2337
197 Ga0207689_10008695 3300025942 Bacteria 8835
198 Ga0207679_10040959 3300025945 Bacteria 3319
199 Ga0207667_10049822 3300025949 Bacteria 4421
200 Ga0207712_10000766 3300025961 Bacteria 24134
201 Ga0207658_10017188 3300025986 Bacteria 4984
202 Ga0207703_10043577 3300026035 Bacteria 3602
203 Ga0207678_10025230 3300026067 Bacteria 5189
204 Ga0207702_10000240 3300026078 Bacteria 63855
205 Ga0207641_10185630 3300026088 Bacteria 1907
206 Ga0207648_10023081 3300026089 Bacteria 5580
207 Ga0207674_10007509 3300026116 Bacteria 12714
208 Ga0207675_100000743 3300026118 Bacteria 32405
209 Ga0207675_100020213 3300026118 Bacteria 6208
210 Ga0207675_100064797 3300026118 Bacteria 3415
211 Ga0207675_100182783 3300026118 Bacteria 2008
212 Ga0207683_10006267 3300026121 Bacteria 10192
213 Ga0268265_10003136 3300028380 Bacteria 12052
214 Ga0268264_10015891 3300028381 Bacteria 6165
215 Ga0268264_10066463 3300028381 Bacteria 3041
216 Ga0265760_10002748 3300031090 Bacteria 5151
217 Ga0265332_10000355 3300031238 Bacteria 34319
218 Ga0265339_10050995 3300031249 Bacteria 2260
219 Ga0265331_10000381 3300031250 Bacteria 46160
220 Ga0265316_10000522 3300031344 Bacteria 43400
221 Ga0265314_10001166 3300031711 Bacteria 30241
222 Ga0265342_10001928 3300031712 Bacteria 18614
223 Ga0373926_0011083 3300035083 Bacteria 3030
224 Ga0373931_0046672 3300035691 Bacteria 2291
225 Ga0373935_0064990 3300035692 Bacteria 2340
226 Ga0373947_0068977 3300035725 Bacteria 2163
227 Ga0395899_0000009 3300037312 Bacteria 538632
228 Ga0395900_0122895 3300037418 Bacteria 2663
229 Ga0395898_0000050 3300037466 Bacteria 283059
230 Ga0395905_0048273 3300037471 Bacteria 3990
231 Ga0436364_0230545 3300037853 Bacteria 17274
232 Ga0436364_0467758 3300037853 Bacteria 119174
233 Ga0436364_0807075 3300037853 Bacteria 20712
234 Ga0436364_0958639 3300037853 Bacteria 6803
235 Ga0436364_1286320 3300037853 Bacteria 4309
236 Ga0436364_1415525 3300037853 Bacteria 425173
237 Ga0436364_1510142 3300037853 Bacteria 4945
238 Ga0436365_1308485 3300039437 Bacteria 7494
239 Ga0436365_1334083 3300039437 Bacteria 11922
240 Ga0436365_1394592 3300039437 Bacteria 6706
241 Ga0436365_1738066 3300039437 Bacteria 103785
242 Ga0436365_1811454 3300039437 Bacteria 4710
243 Ga0436360_0117695 3300039438 Bacteria 4846
244 Ga0436360_0518258 3300039438 Bacteria 5915
245 Ga0436361_0001047 3300039447 Bacteria 1605
246 Ga0436361_1061264 3300039447 Bacteria 48953
247 Ga0436361_1069044 3300039447 Bacteria 4285
248 Ga0436361_1210386 3300039447 Bacteria 5375
249 Ga0436363_1685371 3300039450 Bacteria 4118
250 Ga0436362_0829120 3300039453 Bacteria 2306
251 Ga0453684_0237044 3300044712 Bacteria 2103
252 Ga0466971_0000017 3300044719 Bacteria 82541
253 Ga0466967_0087969 3300045976 Bacteria 2818
254 Ga0495669_0048196 3300046684 Bacteria 1905
255 Ga0496106_0056449 3300048909 Bacteria 2968
256 Ga0496108_0056984 3300048911 Bacteria 3283
257 Ga0496109_0000210 3300048912 Bacteria 57283
258 Ga0496110_0014414 3300048913 Bacteria 6563
259 Ga0496112_0052022 3300048915 Bacteria 4019
260 Ga0496113_0052820 3300048916 Bacteria 3037
261 Ga0496125_0000148 3300048928 Bacteria 154612
262 Ga0501031_0010465 3300049568 Bacteria 6041
263 Ga0501031_0014129 3300049568 Bacteria 5196
264 Ga0501032_0070571 3300049569 Bacteria 2330
265 Ga0501033_0000010 3300049570 Bacteria 270511
266 Ga0501033_0000047 3300049570 Bacteria 122884
267 Ga0501036_0042710 3300049572 Bacteria 3838
268 Ga0501037_0001477 3300049573 Bacteria 17207
269 Ga0501038_0000065 3300049574 Bacteria 86668
270 Ga0501038_0011700 3300049574 Bacteria 8005
271 Ga0501038_0017307 3300049574 Bacteria 6516
272 Ga0501039_0001788 3300049575 Bacteria 15894
273 Ga0501039_0004865 3300049575 Bacteria 10167
274 Ga0501040_0001805 3300049576 Bacteria 13747
275 Ga0501041_0058905 3300049577 Bacteria 2350
276 Ga0501043_0083242 3300049579 Bacteria 2515
277 Ga0501046_0013166 3300049580 Bacteria 7019
278 Ga0501070_0011477 3300049586 Bacteria 7486
279 Ga0501071_0037601 3300049587 Bacteria 3457
280 Ga0501072_0013700 3300049588 Bacteria 6208
281 Ga0501072_0095798 3300049588 Bacteria 2359
282 Ga0501074_0022005 3300049590 Bacteria 4631
283 Ga0501075_0092928 3300049591 Bacteria 2290
284 Ga0501076_0076270 3300049592 Bacteria 2688
285 Ga0501077_0012226 3300049593 Bacteria 5375
286 Ga0501079_0001879 3300049741 Bacteria 15055
287 Ga0501080_0012351 3300049742 Bacteria 7827
288 Ga0501035_0000004 3300049822 Bacteria 403650
289 Ga0501044_0001446 3300049823 Bacteria 27887
290 Ga0501044_0004275 3300049823 Bacteria 16022
291 Ga0501044_0029774 3300049823 Bacteria 5756
292 Ga0501045_0005092 3300049824 Bacteria 9096
293 nmdc:mga05p37_106697_c1 3300050507 Bacteria 3446
294 nmdc:mga05p37_108694_c1 3300050507 Bacteria 3412
295 nmdc:mga05p37_14578_c1 3300050507 Bacteria 9439
296 nmdc:mga05p37_14641_c1 3300050507 Bacteria 9423
297 nmdc:mga05p37_19909_c1 3300050507 Bacteria 8117
298 nmdc:mga05p37_201637_c1 3300050507 Bacteria 2409
299 nmdc:mga05p37_325_c1 3300050507 Bacteria 11900
300 nmdc:mga05p37_67661_c1 3300050507 Bacteria 4394
301 nmdc:mga05p37_8956_c1 3300050507 Bacteria 11836
302 nmdc:mga09592_121761_c1 3300050508 Bacteria 2241
303 nmdc:mga09592_12752_c1 3300050508 Bacteria 6852
304 nmdc:mga09592_6563_c1 3300050508 Bacteria 9472
305 nmdc:mga0qj67_129228_c1 3300050509 Bacteria 2045
306 nmdc:mga0qj67_40209_c1 3300050509 Bacteria 3675
307 nmdc:mga0qj67_54607_c1 3300050509 Bacteria 3163
308 nmdc:mga06r32_2530_c1 3300050510 Bacteria 16356
309 nmdc:mga06r32_74708_c1 3300050510 Bacteria 3287
310 nmdc:mga06r32_81693_c1 3300050510 Bacteria 3147
311 nmdc:mga08y16_111001_c1 3300050511 Bacteria 2855
312 nmdc:mga08y16_32881_c1 3300050511 Bacteria 5452
313 nmdc:mga08y16_39588_c1 3300050511 Bacteria 4946
314 nmdc:mga08y16_90719_c1 3300050511 Bacteria 3186
315 nmdc:mga0n895_14862_c1 3300050512 Bacteria 7085
316 nmdc:mga0n895_171341_c1 3300050512 Bacteria 2203
317 nmdc:mga0n895_23444_c1 3300050512 Bacteria 5800
318 nmdc:mga0n895_305416_c1 3300050512 Bacteria 1613
319 nmdc:mga0n895_690_c1 3300050512 Bacteria 23678
320 nmdc:mga0n895_72263_c1 3300050512 Bacteria 3422
321 nmdc:mga0rr50_2683_c1 3300050513 Bacteria 10080
322 nmdc:mga0rr50_31840_c1 3300050513 Bacteria 3750
323 nmdc:mga0rr50_56603_c1 3300050513 Bacteria 2930
324 nmdc:mga08x19_52878_c1 3300050514 Bacteria 2613
325 nmdc:mga08x19_54945_c1 3300050514 Bacteria 2565
326 nmdc:mga0a205_12334_c1 3300050515 Bacteria 7905
327 nmdc:mga0a205_141269_c1 3300050515 Bacteria 2308
328 nmdc:mga0a205_169_c1 3300050515 Bacteria 43832
329 nmdc:mga0a205_55074_c1 3300050515 Bacteria 3841
330 nmdc:mga0a205_5644_c1 3300050515 Bacteria 11272
331 Ga0500643_013991 3300053087 Bacteria 2807
332 Ga0501084_0004954 3300054114 Bacteria 10886
333 Ga0501082_0043316 3300060353 Bacteria 3880
334 Ga0466962_0000034 3300061719 Bacteria 64306
335 2718716575 2718217752 Bacteria 915884
336 2787506443 2786546548 Bacteria 4745694
337 JGI24033J26618_1000248
338 CNAas_1000451
339 JGI25406J46586_10003820
340 JGI25406J46586_10016344
341 JGI25405J52794_10002838
342 Ga0065704_10087069
343 Ga0065707_10006584
344 Ga0065707_10106179
345 Ga0070683_100081929
346 Ga0070670_100105593
347 Ga0070670_100137537
348 Ga0068869_100014000
349 Ga0070680_100054120
350 Ga0070661_100000325
351 Ga0070661_100086323
352 Ga0070668_100000983
353 Ga0070668_100071383
354 Ga0070668_100116557
355 Ga0070669_100050540
356 Ga0070675_100006266
357 Ga0070675_100014725
358 Ga0070659_100027815
359 Ga0070659_100070390
360 Ga0070703_10000879
361 Ga0070711_100000001
362 Ga0070711_100120703
363 Ga0070694_100004411
364 Ga0070694_100009345
365 Ga0070708_100018266
366 Ga0070708_100054428
367 Ga0070662_100000224
368 Ga0068867_100011062
369 Ga0070706_100000180
370 Ga0070706_100001428
371 Ga0070706_100136939
372 Ga0070707_100010449
373 Ga0070707_100035108
374 Ga0070707_100037318
375 Ga0070698_100004735
376 Ga0070699_100002512
377 Ga0070699_100013619
378 Ga0070699_100019281
379 Ga0070699_100051163
380 Ga0070699_100063642
381 Ga0070679_100037385
382 Ga0070684_100099167
383 Ga0070697_100002278
384 Ga0070697_100010093
385 Ga0070697_100068950
386 Ga0070697_100089806
387 Ga0068853_100030059
388 Ga0068853_100079649
389 Ga0070672_100070928
390 Ga0070695_100012671
391 Ga0070695_100023862
392 Ga0070696_100004401
393 Ga0070696_100014914
394 Ga0070693_100016974
395 Ga0070665_100016088
396 Ga0070665_100034332
397 Ga0068855_100006423
398 Ga0070664_100056511
399 Ga0068856_100002431
400 Ga0068859_100086226
401 Ga0068864_100136853
402 Ga0068861_100010295
403 Ga0068870_10006249
404 Ga0068858_100112868
405 Ga0068858_100154870
406 Ga0068860_100010111
407 Ga0068862_100000841
408 Ga0081455_10002358
409 Ga0081455_10017318
410 Ga0081455_10024272
411 Ga0081538_10006839
412 Ga0081538_10009182
413 Ga0081538_10030972
414 Ga0081538_10039258
415 Ga0081540_1004360
416 Ga0081540_1048613
417 Ga0081539_10000021
418 Ga0081539_10000243
419 Ga0081539_10002374
420 Ga0081539_10007345
421 Ga0081539_10037714
422 Ga0070717_10068606
423 Ga0070716_100017647
424 Ga0075427_10001788
425 Ga0075428_100003347
426 Ga0075428_100011759
427 Ga0075428_100012834
428 Ga0075428_100101761
429 Ga0075428_100188418
430 Ga0075430_100059463
431 Ga0075430_100136022
432 Ga0075431_100056883
433 Ga0075431_100087945
434 Ga0075431_100088128
435 Ga0075431_100088299
436 Ga0075431_100174454
437 Ga0075433_10034801
438 Ga0075433_10038920
439 Ga0075433_10055418
440 Ga0075434_100000933
441 Ga0075434_100068566
442 Ga0075434_100102379
443 Ga0075434_100124605
444 Ga0075429_100010855
445 Ga0075429_100071014
446 Ga0075436_100114468
447 Ga0097620_100086229
448 Ga0075435_100008726
449 Ga0075435_100040147
450 Ga0075435_100048161
451 Ga0111539_10020628
452 Ga0111539_10037701
453 Ga0114129_10007027
454 Ga0114129_10007520
455 Ga0114129_10009635
456 Ga0114129_10012845
457 Ga0114129_10016020
458 Ga0114129_10019368
459 Ga0114129_10090367
460 Ga0114129_10211131
461 Ga0105243_10000657
462 Ga0105242_10004832
463 Ga0105242_10102630
464 Ga0105248_10055000
465 Ga0105249_10000653
466 Ga0157371_10059078
467 Ga0157370_10023244
468 Ga0157369_10051925
469 Ga0157369_10089284
470 Ga0157374_10004788
471 Ga0157374_10006565
472 Ga0157374_10007453
473 Ga0157374_10033010
474 Ga0157374_10117008
475 Ga0157374_10182739
476 Ga0157378_10028181
477 Ga0163162_10002044
478 Ga0163162_10002276
479 Ga0163162_10006309
480 Ga0163162_10019560
481 Ga0163162_10082602
482 Ga0157372_10163454
483 Ga0157375_10016110
484 Ga0157375_10043182
485 Ga0157375_10062830
486 Ga0163163_10000571
487 Ga0157379_10070346
488 Ga0163161_10033445
489 Ga0213872_10002725
490 Ga0213872_10041180
491 Ga0213876_10000089
492 Ga0213876_10002057
493 Ga0213876_10020446
494 Ga0213875_10000008
495 Ga0213875_10000041
496 Ga0213875_10001039
497 Ga0213875_10016570
498 Ga0213875_10018990
499 Ga0207697_10023370
500 Ga0207697_10035639
501 Ga0207653_10000120
502 Ga0207653_10001073
503 Ga0207682_10006480
504 Ga0207645_10007929
505 Ga0207643_10003589
506 Ga0207643_10009149
507 Ga0207684_10000388
508 Ga0207684_10001707
509 Ga0207684_10079762
510 Ga0207707_10014927
511 Ga0207693_10036075
512 Ga0207663_10000001
513 Ga0207663_10098018
514 Ga0207660_10020800
515 Ga0207657_10058639
516 Ga0207649_10000542
517 Ga0207652_10145642
518 Ga0207646_10003115
519 Ga0207646_10045866
520 Ga0207681_10002413
521 Ga0207681_10024854
522 Ga0207700_10156268
523 Ga0207690_10061674
524 Ga0207706_10000099
525 Ga0207706_10006476
526 Ga0207706_10054982
527 Ga0207686_10002533
528 Ga0207709_10002584
529 Ga0207665_10005185
530 Ga0207665_10070405
531 Ga0207691_10007229
532 Ga0207711_10120996
533 Ga0207689_10008695
534 Ga0207679_10040959
535 Ga0207667_10049822
536 Ga0207712_10000766
537 Ga0207658_10017188
538 Ga0207703_10043577
539 Ga0207678_10025230
540 Ga0207702_10000240
541 Ga0207641_10185630
542 Ga0207648_10023081
543 Ga0207674_10007509
544 Ga0207675_100000743
545 Ga0207675_100020213
546 Ga0207675_100064797
547 Ga0207675_100182783
548 Ga0207683_10006267
549 Ga0268265_10003136
550 Ga0268264_10015891
551 Ga0268264_10066463
552 Ga0265760_10002748
553 Ga0265332_10000355
554 Ga0265339_10050995
555 Ga0265331_10000381
556 Ga0265316_10000522
557 Ga0265314_10001166
558 Ga0265342_10001928
559 Ga0373926_0011083
560 Ga0373931_0046672
561 Ga0373935_0064990
562 Ga0373947_0068977
563 Ga0395899_0000009
564 Ga0395900_0122895
565 Ga0395898_0000050
566 Ga0395905_0048273
567 Ga0436364_0230545
568 Ga0436364_0467758
569 Ga0436364_0807075
570 Ga0436364_0958639
571 Ga0436364_1286320
572 Ga0436364_1415525
573 Ga0436364_1510142
574 Ga0436365_1308485
575 Ga0436365_1334083
576 Ga0436365_1394592
577 Ga0436365_1738066
578 Ga0436365_1811454
579 Ga0436360_0117695
580 Ga0436360_0518258
581 Ga0436361_0001047
582 Ga0436361_1061264
583 Ga0436361_1069044
584 Ga0436361_1210386
585 Ga0436363_1685371
586 Ga0436362_0829120
587 Ga0453684_0237044
588 Ga0466971_0000017
589 Ga0466967_0087969
590 Ga0495669_0048196
591 Ga0496106_0056449
592 Ga0496108_0056984
593 Ga0496109_0000210
594 Ga0496110_0014414
595 Ga0496112_0052022
596 Ga0496113_0052820
597 Ga0496125_0000148
598 Ga0501031_0010465
599 Ga0501031_0014129
600 Ga0501032_0070571
601 Ga0501033_0000010
602 Ga0501033_0000047
603 Ga0501036_0042710
604 Ga0501037_0001477
605 Ga0501038_0000065
606 Ga0501038_0011700
607 Ga0501038_0017307
608 Ga0501039_0001788
609 Ga0501039_0004865
610 Ga0501040_0001805
611 Ga0501041_0058905
612 Ga0501043_0083242
613 Ga0501046_0013166
614 Ga0501070_0011477
615 Ga0501071_0037601
616 Ga0501072_0013700
617 Ga0501072_0095798
618 Ga0501074_0022005
619 Ga0501075_0092928
620 Ga0501076_0076270
621 Ga0501077_0012226
622 Ga0501079_0001879
623 Ga0501080_0012351
624 Ga0501035_0000004
625 Ga0501044_0001446
626 Ga0501044_0004275
627 Ga0501044_0029774
628 Ga0501045_0005092
629 nmdc:mga05p37_106697_c1
630 nmdc:mga05p37_108694_c1
631 nmdc:mga05p37_14578_c1
632 nmdc:mga05p37_14641_c1
633 nmdc:mga05p37_19909_c1
634 nmdc:mga05p37_201637_c1
635 nmdc:mga05p37_325_c1
636 nmdc:mga05p37_67661_c1
637 nmdc:mga05p37_8956_c1
638 nmdc:mga09592_121761_c1
639 nmdc:mga09592_12752_c1
640 nmdc:mga09592_6563_c1
641 nmdc:mga0qj67_129228_c1
642 nmdc:mga0qj67_40209_c1
643 nmdc:mga0qj67_54607_c1
644 nmdc:mga06r32_2530_c1
645 nmdc:mga06r32_74708_c1
646 nmdc:mga06r32_81693_c1
647 nmdc:mga08y16_111001_c1
648 nmdc:mga08y16_32881_c1
649 nmdc:mga08y16_39588_c1
650 nmdc:mga08y16_90719_c1
651 nmdc:mga0n895_14862_c1
652 nmdc:mga0n895_171341_c1
653 nmdc:mga0n895_23444_c1
654 nmdc:mga0n895_305416_c1
655 nmdc:mga0n895_690_c1
656 nmdc:mga0n895_72263_c1
657 nmdc:mga0rr50_2683_c1
658 nmdc:mga0rr50_31840_c1
659 nmdc:mga0rr50_56603_c1
660 nmdc:mga08x19_52878_c1
661 nmdc:mga08x19_54945_c1
662 nmdc:mga0a205_12334_c1
663 nmdc:mga0a205_141269_c1
664 nmdc:mga0a205_169_c1
665 nmdc:mga0a205_55074_c1
666 nmdc:mga0a205_5644_c1
667 Ga0500643_013991
668 Ga0501084_0004954
669 Ga0501082_0043316
670 Ga0466962_0000034
671 2718716575
672 2787506443

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

43

496

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yev-assembly2.cif.gz_A structure of caa3-type cytochrome oxidase 0.9482 21 550
7o3e-assembly1.cif.gz_a murine supercomplex ciii2civ in the intermediate locked conformation 0.9463 29 538
8d4t-assembly1.cif.gz_N mammalian civ with gdn bound 0.9433 29 536
3ehb-assembly1.cif.gz_A a d-pathway mutation decouples the paracoccus denitrificans cytochrome c oxidase by altering the side chain orientation of a distant, conserved glutamate 0.9417 22 533
6pw1-assembly2.cif.gz_C cytochrome c oxidase delta 16 0.9415 24 527
ID Description Score Start End Superfamily
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9491 21 545 1.20.210.10
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9469 12 544 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9438 21 545 1.20.210.10
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9434 12 544 1.20.210.10
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9364 16 535 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A1H0M2Z6-F1-model_v4 Cytochrome C and Quinol oxidase polypeptide I 0.981 21 135 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A172UXP0-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9784 359 503 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A536ALJ4-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9783 400 550 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A6V8DB03-F1-model_v4 Cytochrome oxidase subunit I profile domain-containing protein 0.9732 398 536 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-H2EHB3-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9723 378 507 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872

Map