F412422

General Info

Members Datasets Scaffolds Average Seq Length
335 231 671 342

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0002693|Ga0501031_0002693_4021_5223
Length 400
Sequence MSTVTSPAPPSPVSETAAAAGRPPSTPRWNPSKITHVLDRVGLGFFSPFVRLVAGDEPGKQAQEIARNILLPLTAFGIFIGFWTLCAERIHTESMRIPTPSETWTAWQGIVEFANREHQKAIDFHKRMETLAARYDAQAAKDASALAAAKTAGNAADVEKLTKSLAADREHAATFRSHTYAGPPTFFDQIRVSLFTVSVGFLVATIIAVPLGILCGLSKAFNTAINPLIQIFKPVSPLAWLPIVFVIVTALYTPPPGEQLLTRALLISAGTVTLCSLWPTLINTAVGVAAVDPDHLNVARVLKLNWLQRVFKIVLPSALPLIFTGLRLSLGVGWMVLIAADMLAQNPGLGKFVWDTFQNGSTNSMAQIVCAVFAIGLIGFALDRVMLILQRLVSFDENAV

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
71 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
72 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
73 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
74 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
99 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
104 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
105 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
110 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
111 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
112 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
123 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
125 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
126 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
132 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
133 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
138 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
139 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
140 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
174 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
182 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
183 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
184 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
185 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
186 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
187 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
188 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
189 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
190 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
193 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
194 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
195 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
196 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
197 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
198 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
199 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
200 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
205 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
206 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
207 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
208 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
209 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
210 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
211 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
212 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
213 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
214 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
215 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
216 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
217 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
218 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
219 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
220 2896184354 Aurantiacibacter suaedae GH3-15 Isolate Rhizosphere
221 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
222 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
223 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
224 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
225 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
226 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
227 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
228 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
229 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
230 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
231 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.85
Metatranscriptomes 1.79
Isolates 8.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.15
Nodule 2.69
Rhizoplane 1.79
Rhizosphere 74.03
Stem 0
Stem Tuber 0
Unclassified 0.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0002693 3300049568 Bacteria 11306
2 JGI25153J46596_10000010 3300003215 Bacteria 337769
3 rootH2_10012658 3300003320 Bacteria 82320
4 rootH2_10121176 3300003320 Bacteria 4057
5 rootH1_10007370 3300003316 Bacteria 11288
6 rootH1_10007370 3300003323 Bacteria 63699
7 Ga0065704_10000191 3300005289 Bacteria 318191
8 Ga0065707_10082868 3300005295 Bacteria 11668
9 Ga0065707_10082961 3300005295 Bacteria 11162
10 Ga0070658_10155115 3300005327 Bacteria 1919
11 Ga0070683_100011322 3300005329 Bacteria 7704
12 Ga0070690_100005887 3300005330 Bacteria 6915
13 Ga0070670_100000002 3300005331 Bacteria 568775
14 Ga0070670_100020715 3300005331 Bacteria 5655
15 Ga0070666_10004140 3300005335 Bacteria 8801
16 Ga0070666_10014256 3300005335 Bacteria 5059
17 Ga0070666_10170423 3300005335 Bacteria 1524
18 Ga0068868_100010709 3300005338 Bacteria 6647
19 Ga0070660_100063445 3300005339 Bacteria 2872
20 Ga0070661_100069816 3300005344 Bacteria 2583
21 Ga0070669_100001188 3300005353 Bacteria 18972
22 Ga0070671_100000071 3300005355 Bacteria 65048
23 Ga0070671_100007147 3300005355 Bacteria 8921
24 Ga0070673_100192652 3300005364 Bacteria 1752
25 Ga0070688_100023753 3300005365 Bacteria 3610
26 Ga0070667_100000007 3300005367 Bacteria 292130
27 Ga0070667_100001223 3300005367 Bacteria 23386
28 Ga0070713_100091435 3300005436 Bacteria 2618
29 Ga0068867_100027144 3300005459 Bacteria 4114
30 Ga0070685_10000275 3300005466 Bacteria 33104
31 Ga0070685_10092013 3300005466 Bacteria 1837
32 Ga0070686_100013313 3300005544 Bacteria 4705
33 Ga0070665_100008202 3300005548 Bacteria 10574
34 Ga0070665_100055106 3300005548 Bacteria 3988
35 Ga0068855_100003303 3300005563 Bacteria 19736
36 Ga0068855_100092527 3300005563 Bacteria 3487
37 Ga0068855_100197020 3300005563 Bacteria 2269
38 Ga0070664_100000900 3300005564 Bacteria 23120
39 Ga0068857_100117272 3300005577 Bacteria 2396
40 Ga0068856_100000776 3300005614 Bacteria 34703
41 Ga0068856_100000876 3300005614 Bacteria 32182
42 Ga0068856_100007302 3300005614 Bacteria 10785
43 Ga0068856_100013718 3300005614 Bacteria 7834
44 Ga0068856_100092102 3300005614 Bacteria 3016
45 Ga0070702_100007747 3300005615 Bacteria 5159
46 Ga0068852_100019858 3300005616 Bacteria 5330
47 Ga0068852_100072646 3300005616 Bacteria 3024
48 Ga0068859_100003052 3300005617 Bacteria 16996
49 Ga0068859_100116251 3300005617 Bacteria 2739
50 Ga0068864_100000003 3300005618 Bacteria 568775
51 Ga0068864_100065797 3300005618 Bacteria 3144
52 Ga0068861_100035616 3300005719 Bacteria 3688
53 Ga0068861_100113754 3300005719 Bacteria 2172
54 Ga0068851_10073863 3300005834 Bacteria 1769
55 Ga0068863_100011173 3300005841 Bacteria 8703
56 Ga0068858_100057350 3300005842 Bacteria 3599
57 Ga0068860_100001489 3300005843 Bacteria 25283
58 Ga0068860_100009817 3300005843 Bacteria 9501
59 Ga0068862_100000548 3300005844 Bacteria 39395
60 Ga0068862_100006952 3300005844 Bacteria 9389
61 Ga0081538_10009610 3300005981 Bacteria 8045
62 Ga0075368_10000041 3300006042 Bacteria 29722
63 Ga0075363_100011084 3300006048 Bacteria 4306
64 Ga0075364_10019379 3300006051 Bacteria 4270
65 Ga0075362_10001396 3300006177 Bacteria 7673
66 Ga0075367_10001814 3300006178 Bacteria 9406
67 Ga0075369_10013503 3300006186 Bacteria 3243
68 Ga0075366_10008795 3300006195 Bacteria 5623
69 Ga0097621_100012010 3300006237 Bacteria 6409
70 Ga0075370_10020190 3300006353 Bacteria 3638
71 Ga0075434_100493582 3300006871 Bacteria 1245
72 Ga0097620_100003052 3300006931 Bacteria 16996
73 Ga0097620_100116242 3300006931 Bacteria 2739
74 Ga0105250_10000004 3300009092 Bacteria 438653
75 Ga0105245_10003339 3300009098 Bacteria 14395
76 Ga0105245_10526585 3300009098 Bacteria 1201
77 Ga0105247_10001474 3300009101 Bacteria 16937
78 Ga0114129_10034549 3300009147 Bacteria 7142
79 Ga0105241_10172368 3300009174 Bacteria 1788
80 Ga0105248_10010752 3300009177 Bacteria 10102
81 Ga0105237_10059157 3300009545 Bacteria 3834
82 Ga0105237_10307064 3300009545 Bacteria 1589
83 Ga0105238_10006007 3300009551 Bacteria 12035
84 Ga0105238_10017471 3300009551 Bacteria 7291
85 Ga0105238_10196406 3300009551 Bacteria 1993
86 Ga0105249_10007235 3300009553 Bacteria 9684
87 Ga0105246_10137832 3300011119 Bacteria 1831
88 Ga0157374_10003995 3300013296 Bacteria 12394
89 Ga0163162_10140051 3300013306 Bacteria 2532
90 Ga0163162_10288530 3300013306 Bacteria 1773
91 Ga0157372_10138991 3300013307 Bacteria 2798
92 Ga0157375_10001697 3300013308 Bacteria 18902
93 Ga0163163_10000031 3300014325 Bacteria 169040
94 Ga0163163_10004421 3300014325 Bacteria 11982
95 Ga0157380_10000456 3300014326 Bacteria 24961
96 Ga0157377_10022180 3300014745 Bacteria 3349
97 Ga0157379_10000021 3300014968 Bacteria 92053
98 Ga0157379_10002963 3300014968 Bacteria 14324
99 Ga0157379_10075777 3300014968 Bacteria 3012
100 Ga0157376_10052737 3300014969 Bacteria 3383
101 Ga0214544_1007743 3300021320 Bacteria 18523
102 Ga0214542_1000082 3300021321 Bacteria 120825
103 Ga0214543_1000075 3300021327 Bacteria 120861
104 Ga0209758_1000033 3300025297 Bacteria 469998
105 Ga0209758_1016919 3300025297 Bacteria 3670
106 Ga0209050_1004613 3300025298 Bacteria 9204
107 Ga0209257_1000237 3300025304 Bacteria 128812
108 Ga0207696_1000056 3300025711 Bacteria 251959
109 Ga0207710_10031206 3300025900 Bacteria 2329
110 Ga0207710_10033582 3300025900 Bacteria 2251
111 Ga0207680_10028123 3300025903 Bacteria 3141
112 Ga0207680_10029494 3300025903 Bacteria 3083
113 Ga0207654_10124306 3300025911 Bacteria 1624
114 Ga0207649_10178278 3300025920 Bacteria 1485
115 Ga0207681_10001492 3300025923 Bacteria 15107
116 Ga0207650_10000003 3300025925 Bacteria 1123235
117 Ga0207687_10037370 3300025927 Bacteria 3313
118 Ga0207644_10000521 3300025931 Bacteria 24932
119 Ga0207644_10002038 3300025931 Bacteria 13082
120 Ga0207691_10146920 3300025940 Bacteria 2075
121 Ga0207711_10000839 3300025941 Bacteria 29699
122 Ga0207711_10001534 3300025941 Bacteria 21413
123 Ga0207711_10002704 3300025941 Bacteria 15664
124 Ga0207661_10068336 3300025944 Bacteria 2893
125 Ga0207661_10156890 3300025944 Bacteria 1972
126 Ga0207667_10005745 3300025949 Bacteria 15140
127 Ga0207712_10058423 3300025961 Bacteria 2726
128 Ga0207658_10000004 3300025986 Bacteria 569357
129 Ga0207677_10046804 3300026023 Bacteria 2899
130 Ga0207703_10023384 3300026035 Bacteria 4853
131 Ga0207702_10000232 3300026078 Bacteria 64788
132 Ga0207702_10018238 3300026078 Bacteria 5806
133 Ga0207702_10071291 3300026078 Bacteria 2992
134 Ga0207641_10004134 3300026088 Bacteria 12647
135 Ga0207641_10010514 3300026088 Bacteria 7596
136 Ga0207641_10190699 3300026088 Bacteria 1884
137 Ga0207676_10000003 3300026095 Bacteria 1123235
138 Ga0207676_10025068 3300026095 Bacteria 4422
139 Ga0207674_10011136 3300026116 Bacteria 10115
140 Ga0207675_100023487 3300026118 Bacteria 5735
141 Ga0209813_10000435 3300027866 Bacteria 10213
142 Ga0209974_10037706 3300027876 Bacteria 1605
143 Ga0268266_10005242 3300028379 Bacteria 12177
144 Ga0268266_10038776 3300028379 Bacteria 4056
145 Ga0268265_10039580 3300028380 Bacteria 3475
146 Ga0268264_10000016 3300028381 Bacteria 502537
147 Ga0268264_10223585 3300028381 Bacteria 1734
148 Ga0265336_10050926 3300028666 Bacteria 1251
149 Ga0307512_10061511 3300030522 Bacteria 2891
150 Ga0265331_10061024 3300031250 Bacteria 1781
151 Ga0265327_10002553 3300031251 Bacteria 18928
152 Ga0265327_10042660 3300031251 Bacteria 2434
153 Ga0307509_10008486 3300031507 Bacteria 13080
154 Ga0307408_100067633 3300031548 Bacteria 2628
155 Ga0316575_10001105 3300031665 Bacteria 8404
156 Ga0316579_10012470 3300031691 Bacteria 3638
157 Ga0316579_10086025 3300031691 Bacteria 1500
158 Ga0316578_10051926 3300031728 Bacteria 2401
159 Ga0307516_10052291 3300031730 Bacteria 3999
160 Ga0307405_10017132 3300031731 Bacteria 3969
161 Ga0316577_10075936 3300031733 Bacteria 1876
162 Ga0316577_10110167 3300031733 Bacteria 1545
163 Ga0307413_10190922 3300031824 Bacteria 1471
164 Ga0307406_10121891 3300031901 Bacteria 1815
165 Ga0307407_10042281 3300031903 Bacteria 2554
166 Ga0307412_10021783 3300031911 Bacteria 3920
167 Ga0307412_10044544 3300031911 Bacteria 2895
168 Ga0307412_10359814 3300031911 Bacteria 1171
169 Ga0307409_100018681 3300031995 Bacteria 4670
170 Ga0307416_100366271 3300032002 Bacteria 1465
171 Ga0307411_10010576 3300032005 Bacteria 4929
172 Ga0316583_10019297 3300032133 Bacteria 2448
173 Ga0316596_1000294 3300033541 Bacteria 7892
174 Ga0316596_1001589 3300033541 Bacteria 4643
175 Ga0316596_1002523 3300033541 Bacteria 3918
176 Ga0316596_1002630 3300033541 Bacteria 3850
177 Ga0316596_1003043 3300033541 Bacteria 3643
178 Ga0316596_1004853 3300033541 Bacteria 3040
179 Ga0373944_0014867 3300035089 Bacteria 2177
180 Ga0373962_0057342 3300035242 Bacteria 1136
181 Ga0316574_0049985 3300035398 Bacteria 2601
182 Ga0316574_0249825 3300035398 Bacteria 1133
183 Ga0373931_0025365 3300035691 Bacteria 3011
184 Ga0373927_0000736 3300035695 Bacteria 24973
185 Ga0373927_0006067 3300035695 Bacteria 8278
186 Ga0373927_0056203 3300035695 Bacteria 2544
187 Ga0373947_0023724 3300035725 Bacteria 3571
188 Ga0373937_0150365 3300036401 Bacteria 2181
189 Ga0316582_0012178 3300036647 Bacteria 4789
190 Ga0316582_0014450 3300036647 Bacteria 4480
191 Ga0316582_0033734 3300036647 Bacteria 3147
192 Ga0316582_0034477 3300036647 Bacteria 3118
193 Ga0316582_0060263 3300036647 Bacteria 2432
194 Ga0316582_0149291 3300036647 Bacteria 1579
195 Ga0316584_0007354 3300036712 Bacteria 7521
196 Ga0316584_0014068 3300036712 Bacteria 5682
197 Ga0316584_0014219 3300036712 Bacteria 5660
198 Ga0316584_0026398 3300036712 Bacteria 4270
199 Ga0316584_0141124 3300036712 Bacteria 1797
200 Ga0373925_0003815 3300037068 Bacteria 11568
201 Ga0373925_0024075 3300037068 Bacteria 4444
202 Ga0395899_0000075 3300037312 Bacteria 178317
203 Ga0395900_0161046 3300037418 Bacteria 2289
204 Ga0395905_0155793 3300037471 Bacteria 2149
205 Ga0316581_0003288 3300037588 Bacteria 4007
206 Ga0400483_018242 3300039062 Bacteria 11628
207 Ga0400483_043836 3300039062 Bacteria 1246
208 Ga0400483_062144 3300039062 Bacteria 10878
209 Ga0400483_098374 3300039062 Bacteria 5691
210 Ga0400483_168749 3300039062 Bacteria 2186
211 Ga0400483_188461 3300039062 Bacteria 8749
212 Ga0400483_192144 3300039062 Bacteria 3637
213 Ga0400483_198537 3300039062 Bacteria 1154
214 Ga0400483_227137 3300039062 Bacteria 2613
215 Ga0451839_1314188 3300041496 Bacteria 2377
216 Ga0451577_0000091 3300042876 Bacteria 201647
217 Ga0451577_0009299 3300042876 Bacteria 9473
218 Ga0451577_0065479 3300042876 Bacteria 3241
219 Ga0453684_0000632 3300044712 Bacteria 127568
220 Ga0453684_0083437 3300044712 Bacteria 3977
221 Ga0451576_0000449 3300045051 Bacteria 93533
222 Ga0451576_0000940 3300045051 Bacteria 54934
223 Ga0451576_0062092 3300045051 Bacteria 3896
224 Ga0451576_0395350 3300045051 Bacteria 1449
225 Ga0495638_0015916 3300046460 Bacteria 5040
226 Ga0495638_0060374 3300046460 Bacteria 2345
227 Ga0495586_0096950 3300046535 Bacteria 1634
228 Ga0495658_0164410 3300046683 Bacteria 1370
229 Ga0495680_0193183 3300047322 Unclassified 1463
230 Ga0496102_0100629 3300048905 Bacteria 2685
231 Ga0496108_0082409 3300048911 Bacteria 2728
232 Ga0496109_0007421 3300048912 Bacteria 9281
233 Ga0496112_0006325 3300048915 Bacteria 10399
234 Ga0496113_0016936 3300048916 Bacteria 5046
235 Ga0496114_0016581 3300048917 Bacteria 5938
236 Ga0496121_0020486 3300048924 Bacteria 6542
237 Ga0496124_0003619 3300048927 Bacteria 18769
238 Ga0496124_0148236 3300048927 Bacteria 1844
239 Ga0496125_0038663 3300048928 Bacteria 4125
240 Ga0501031_0013881 3300049568 Bacteria 5248
241 Ga0501031_0124208 3300049568 Bacteria 1686
242 Ga0501032_0001135 3300049569 Bacteria 21313
243 Ga0501032_0143612 3300049569 Bacteria 1571
244 Ga0501033_0000006 3300049570 Bacteria 348953
245 Ga0501033_0016713 3300049570 Bacteria 5550
246 Ga0501033_0172500 3300049570 Bacteria 1553
247 Ga0501034_0000012 3300049571 Bacteria 310504
248 Ga0501038_0497161 3300049574 Bacteria 933
249 Ga0501041_0013673 3300049577 Bacteria 4815
250 Ga0501042_0060529 3300049578 Bacteria 2704
251 Ga0501043_0000207 3300049579 Bacteria 53905
252 Ga0501043_0000407 3300049579 Bacteria 38692
253 Ga0501046_0024352 3300049580 Bacteria 4967
254 Ga0501047_0001441 3300049581 Bacteria 23289
255 Ga0501067_0040347 3300049583 Bacteria 2593
256 Ga0501070_0088318 3300049586 Bacteria 2566
257 Ga0501071_0057276 3300049587 Bacteria 2816
258 Ga0501072_0011134 3300049588 Bacteria 6865
259 Ga0501073_0003752 3300049589 Bacteria 11419
260 Ga0501074_0265151 3300049590 Bacteria 1221
261 Ga0501075_0006708 3300049591 Bacteria 7942
262 Ga0501076_0010293 3300049592 Bacteria 6932
263 Ga0501077_0068594 3300049593 Bacteria 2248
264 Ga0501257_000001 3300049686 Bacteria 74809
265 Ga0501079_0040391 3300049741 Bacteria 3598
266 Ga0501080_0057530 3300049742 Bacteria 3620
267 Ga0501081_0007290 3300049743 Bacteria 7185
268 Ga0501083_0001453 3300049744 Bacteria 16170
269 Ga0501083_0004532 3300049744 Bacteria 9816
270 Ga0501083_0013650 3300049744 Bacteria 5680
271 Ga0501035_0000003 3300049822 Bacteria 557461
272 Ga0501035_0067355 3300049822 Bacteria 3177
273 Ga0501035_0179823 3300049822 Bacteria 1822
274 Ga0501044_0000032 3300049823 Bacteria 169439
275 Ga0501044_0001193 3300049823 Bacteria 30796
276 Ga0501044_0001887 3300049823 Bacteria 24285
277 Ga0501044_0030348 3300049823 Bacteria 5699
278 Ga0501044_0048823 3300049823 Bacteria 4370
279 Ga0501044_0145191 3300049823 Bacteria 2359
280 Ga0501045_0144944 3300049824 Bacteria 1766
281 nmdc:mga03683_313_c1 3300050489 Bacteria 13884
282 nmdc:mga03n38_13116_c1 3300050490 Bacteria 3139
283 nmdc:mga00v17_1428_c1 3300050491 Bacteria 12538
284 nmdc:mga0yw44_96946_c1 3300050492 Bacteria 1873
285 nmdc:mga06z11_282_c1 3300050494 Bacteria 19918
286 nmdc:mga04h51_81_c1 3300050495 Bacteria 30329
287 nmdc:mga07m45_17_c1 3300050496 Bacteria 140936
288 nmdc:mga0n895_219498_c1 3300050512 Bacteria 1930
289 nmdc:mga0n895_237522_c1 3300050512 Bacteria 1849
290 nmdc:mga0sz30_597_c1 3300050516 Bacteria 13504
291 Ga0495619_0030209 3300053085 Bacteria 3507
292 Ga0500643_007470 3300053087 Bacteria 4401
293 Ga0500644_0003847 3300053088 Bacteria 3735
294 Ga0500641_0005744 3300053096 Bacteria 4397
295 Ga0500650_0000349 3300053098 Bacteria 11204
296 Ga0500642_0006740 3300053130 Bacteria 3809
297 Ga0500658_0047021 3300053134 Bacteria 1750
298 Ga0500658_0056892 3300053134 Bacteria 1615
299 Ga0500658_0103101 3300053134 Bacteria 1247
300 Ga0500604_0002037 3300053151 Bacteria 5583
301 Ga0500622_0001507 3300053156 Bacteria 18474
302 Ga0500622_0011075 3300053156 Bacteria 4923
303 Ga0500609_001045 3300053731 Bacteria 4136
304 Ga0501084_0039540 3300054114 Bacteria 3945
305 Ga0501084_0087129 3300054114 Bacteria 2622
306 Ga0501084_0258041 3300054114 Bacteria 1471
307 Ga0501082_0083742 3300060353 Bacteria 2752
308 Ga0530510_0063495 3300061734 Bacteria 2674
309 2508541648 2508501009 Bacteria 7784016
310 2585398050 2582581866 Bacteria 6859583
311 2597810578 2597489875 Bacteria 7010078
312 2599102341 2597490356 Bacteria 7030811
313 2643754610 2643221547 Bacteria 4740017
314 2657683378 2657244999 Bacteria 5946535
315 2738945699 2738541317 Bacteria 5340176
316 2792580455 2791355082 Bacteria 5973319
317 2804754676 2802429268 Bacteria 6094027
318 2837654343 2837651117 Bacteria 3772164
319 2837679003 2837678835 Bacteria 5252418
320 2838077760 2838074704 Bacteria 6785777
321 2840884038 2840878972 Bacteria 5483153
322 2846957005 2846952575 Bacteria 6587527
323 2891052260 2891048133 Bacteria 4447501
324 2894513896 2894510363 Bacteria 5121143
325 2896185268 2896184354 Bacteria 3258548
326 2896391874 2896384573 Bacteria 7700774
327 2897807671 2897803580 Bacteria 7000062
328 2913296716 2913295892 Bacteria 6333755
329 2913310619 2913308742 Bacteria 5350706
330 2920764984 2920760137 Bacteria 7427611
331 2989395188 2989392574 Bacteria 4554005
332 8001526880 8001522603 Bacteria 4726425
333 8005662742 8005658619 Bacteria 4500593
334 8049298508 8049293176 Bacteria 6128433
335 8054563606 8054558443 Bacteria 5204801
336 8056687273 8056681323 Bacteria 8472857
337 Ga0501031_0002693
338 JGI25153J46596_10000010
339 rootH2_10012658
340 rootH2_10121176
341 rootH1_10007370
342 Ga0065704_10000191
343 Ga0065707_10082868
344 Ga0065707_10082961
345 Ga0070658_10155115
346 Ga0070683_100011322
347 Ga0070690_100005887
348 Ga0070670_100000002
349 Ga0070670_100020715
350 Ga0070666_10004140
351 Ga0070666_10014256
352 Ga0070666_10170423
353 Ga0068868_100010709
354 Ga0070660_100063445
355 Ga0070661_100069816
356 Ga0070669_100001188
357 Ga0070671_100000071
358 Ga0070671_100007147
359 Ga0070673_100192652
360 Ga0070688_100023753
361 Ga0070667_100000007
362 Ga0070667_100001223
363 Ga0070713_100091435
364 Ga0068867_100027144
365 Ga0070685_10000275
366 Ga0070685_10092013
367 Ga0070686_100013313
368 Ga0070665_100008202
369 Ga0070665_100055106
370 Ga0068855_100003303
371 Ga0068855_100092527
372 Ga0068855_100197020
373 Ga0070664_100000900
374 Ga0068857_100117272
375 Ga0068856_100000776
376 Ga0068856_100000876
377 Ga0068856_100007302
378 Ga0068856_100013718
379 Ga0068856_100092102
380 Ga0070702_100007747
381 Ga0068852_100019858
382 Ga0068852_100072646
383 Ga0068859_100003052
384 Ga0068859_100116251
385 Ga0068864_100000003
386 Ga0068864_100065797
387 Ga0068861_100035616
388 Ga0068861_100113754
389 Ga0068851_10073863
390 Ga0068863_100011173
391 Ga0068858_100057350
392 Ga0068860_100001489
393 Ga0068860_100009817
394 Ga0068862_100000548
395 Ga0068862_100006952
396 Ga0081538_10009610
397 Ga0075368_10000041
398 Ga0075363_100011084
399 Ga0075364_10019379
400 Ga0075362_10001396
401 Ga0075367_10001814
402 Ga0075369_10013503
403 Ga0075366_10008795
404 Ga0097621_100012010
405 Ga0075370_10020190
406 Ga0075434_100493582
407 Ga0097620_100003052
408 Ga0097620_100116242
409 Ga0105250_10000004
410 Ga0105245_10003339
411 Ga0105245_10526585
412 Ga0105247_10001474
413 Ga0114129_10034549
414 Ga0105241_10172368
415 Ga0105248_10010752
416 Ga0105237_10059157
417 Ga0105237_10307064
418 Ga0105238_10006007
419 Ga0105238_10017471
420 Ga0105238_10196406
421 Ga0105249_10007235
422 Ga0105246_10137832
423 Ga0157374_10003995
424 Ga0163162_10140051
425 Ga0163162_10288530
426 Ga0157372_10138991
427 Ga0157375_10001697
428 Ga0163163_10000031
429 Ga0163163_10004421
430 Ga0157380_10000456
431 Ga0157377_10022180
432 Ga0157379_10000021
433 Ga0157379_10002963
434 Ga0157379_10075777
435 Ga0157376_10052737
436 Ga0214544_1007743
437 Ga0214542_1000082
438 Ga0214543_1000075
439 Ga0209758_1000033
440 Ga0209758_1016919
441 Ga0209050_1004613
442 Ga0209257_1000237
443 Ga0207696_1000056
444 Ga0207710_10031206
445 Ga0207710_10033582
446 Ga0207680_10028123
447 Ga0207680_10029494
448 Ga0207654_10124306
449 Ga0207649_10178278
450 Ga0207681_10001492
451 Ga0207650_10000003
452 Ga0207687_10037370
453 Ga0207644_10000521
454 Ga0207644_10002038
455 Ga0207691_10146920
456 Ga0207711_10000839
457 Ga0207711_10001534
458 Ga0207711_10002704
459 Ga0207661_10068336
460 Ga0207661_10156890
461 Ga0207667_10005745
462 Ga0207712_10058423
463 Ga0207658_10000004
464 Ga0207677_10046804
465 Ga0207703_10023384
466 Ga0207702_10000232
467 Ga0207702_10018238
468 Ga0207702_10071291
469 Ga0207641_10004134
470 Ga0207641_10010514
471 Ga0207641_10190699
472 Ga0207676_10000003
473 Ga0207676_10025068
474 Ga0207674_10011136
475 Ga0207675_100023487
476 Ga0209813_10000435
477 Ga0209974_10037706
478 Ga0268266_10005242
479 Ga0268266_10038776
480 Ga0268265_10039580
481 Ga0268264_10000016
482 Ga0268264_10223585
483 Ga0265336_10050926
484 Ga0307512_10061511
485 Ga0265331_10061024
486 Ga0265327_10002553
487 Ga0265327_10042660
488 Ga0307509_10008486
489 Ga0307408_100067633
490 Ga0316575_10001105
491 Ga0316579_10012470
492 Ga0316579_10086025
493 Ga0316578_10051926
494 Ga0307516_10052291
495 Ga0307405_10017132
496 Ga0316577_10075936
497 Ga0316577_10110167
498 Ga0307413_10190922
499 Ga0307406_10121891
500 Ga0307407_10042281
501 Ga0307412_10021783
502 Ga0307412_10044544
503 Ga0307412_10359814
504 Ga0307409_100018681
505 Ga0307416_100366271
506 Ga0307411_10010576
507 Ga0316583_10019297
508 Ga0316596_1000294
509 Ga0316596_1001589
510 Ga0316596_1002523
511 Ga0316596_1002630
512 Ga0316596_1003043
513 Ga0316596_1004853
514 Ga0373944_0014867
515 Ga0373962_0057342
516 Ga0316574_0049985
517 Ga0316574_0249825
518 Ga0373931_0025365
519 Ga0373927_0000736
520 Ga0373927_0006067
521 Ga0373927_0056203
522 Ga0373947_0023724
523 Ga0373937_0150365
524 Ga0316582_0012178
525 Ga0316582_0014450
526 Ga0316582_0033734
527 Ga0316582_0034477
528 Ga0316582_0060263
529 Ga0316582_0149291
530 Ga0316584_0007354
531 Ga0316584_0014068
532 Ga0316584_0014219
533 Ga0316584_0026398
534 Ga0316584_0141124
535 Ga0373925_0003815
536 Ga0373925_0024075
537 Ga0395899_0000075
538 Ga0395900_0161046
539 Ga0395905_0155793
540 Ga0316581_0003288
541 Ga0400483_018242
542 Ga0400483_043836
543 Ga0400483_062144
544 Ga0400483_098374
545 Ga0400483_168749
546 Ga0400483_188461
547 Ga0400483_192144
548 Ga0400483_198537
549 Ga0400483_227137
550 Ga0451839_1314188
551 Ga0451577_0000091
552 Ga0451577_0009299
553 Ga0451577_0065479
554 Ga0453684_0000632
555 Ga0453684_0083437
556 Ga0451576_0000449
557 Ga0451576_0000940
558 Ga0451576_0062092
559 Ga0451576_0395350
560 Ga0495638_0015916
561 Ga0495638_0060374
562 Ga0495586_0096950
563 Ga0495658_0164410
564 Ga0495680_0193183
565 Ga0496102_0100629
566 Ga0496108_0082409
567 Ga0496109_0007421
568 Ga0496112_0006325
569 Ga0496113_0016936
570 Ga0496114_0016581
571 Ga0496121_0020486
572 Ga0496124_0003619
573 Ga0496124_0148236
574 Ga0496125_0038663
575 Ga0501031_0013881
576 Ga0501031_0124208
577 Ga0501032_0001135
578 Ga0501032_0143612
579 Ga0501033_0000006
580 Ga0501033_0016713
581 Ga0501033_0172500
582 Ga0501034_0000012
583 Ga0501038_0497161
584 Ga0501041_0013673
585 Ga0501042_0060529
586 Ga0501043_0000207
587 Ga0501043_0000407
588 Ga0501046_0024352
589 Ga0501047_0001441
590 Ga0501067_0040347
591 Ga0501070_0088318
592 Ga0501071_0057276
593 Ga0501072_0011134
594 Ga0501073_0003752
595 Ga0501074_0265151
596 Ga0501075_0006708
597 Ga0501076_0010293
598 Ga0501077_0068594
599 Ga0501257_000001
600 Ga0501079_0040391
601 Ga0501080_0057530
602 Ga0501081_0007290
603 Ga0501083_0001453
604 Ga0501083_0004532
605 Ga0501083_0013650
606 Ga0501035_0000003
607 Ga0501035_0067355
608 Ga0501035_0179823
609 Ga0501044_0000032
610 Ga0501044_0001193
611 Ga0501044_0001887
612 Ga0501044_0030348
613 Ga0501044_0048823
614 Ga0501044_0145191
615 Ga0501045_0144944
616 nmdc:mga03683_313_c1
617 nmdc:mga03n38_13116_c1
618 nmdc:mga00v17_1428_c1
619 nmdc:mga0yw44_96946_c1
620 nmdc:mga06z11_282_c1
621 nmdc:mga04h51_81_c1
622 nmdc:mga07m45_17_c1
623 nmdc:mga0n895_219498_c1
624 nmdc:mga0n895_237522_c1
625 nmdc:mga0sz30_597_c1
626 Ga0495619_0030209
627 Ga0500643_007470
628 Ga0500644_0003847
629 Ga0500641_0005744
630 Ga0500650_0000349
631 Ga0500642_0006740
632 Ga0500658_0047021
633 Ga0500658_0056892
634 Ga0500658_0103101
635 Ga0500604_0002037
636 Ga0500622_0001507
637 Ga0500622_0011075
638 Ga0500609_001045
639 Ga0501084_0039540
640 Ga0501084_0087129
641 Ga0501084_0258041
642 Ga0501082_0083742
643 Ga0530510_0063495
644 2508541648
645 2585398050
646 2597810578
647 2599102341
648 2643754610
649 2657683378
650 2738945699
651 2792580455
652 2804754676
653 2837654343
654 2837679003
655 2838077760
656 2840884038
657 2846957005
658 2891052260
659 2894513896
660 2896185268
661 2896391874
662 2897807671
663 2913296716
664 2913310619
665 2920764984
666 2989395188
667 8001526880
668 8005662742
669 8049298508
670 8054563606
671 8056687273

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

208

395

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ahd-assembly1.cif.gz_A opua (e190q) occluded 0.8766 144 349
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8353 144 351
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8041 144 351
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.7731 145 351
4jbw-assembly2.cif.gz_H crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.7463 144 336
ID Description Score Start End Superfamily
af_Q2G1I4_54_251_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9448 140 349 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9245 143 350 1.10.3720.10
af_Q2G1I4_54_251_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9216 140 349 1.10.3720.10
af_Q57856_64_258_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9202 143 347 1.10.3720.10
af_O69722_23_210_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9178 147 342 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A7C1M631-F1-model_v4 ABC transporter permease 0.9957 148 350 GO:0005886
GO:0055085
AF-A0A3D5Q2U0-F1-model_v4 Nitrate ABC transporter permease 0.9918 56 350 GO:0005886
GO:0055085
AF-A0A4Z1C911-F1-model_v4 ABC transporter permease 0.9892 49 350 GO:0005886
GO:0055085
AF-A0A2E5SJ44-F1-model_v4 ABC transporter permease 0.9888 60 350 GO:0005886
GO:0055085
AF-A0A1G0KVH8-F1-model_v4 Nitrate ABC transporter permease 0.9836 55 355 GO:0005886
GO:0055085

Map