F411366

General Info

Members Datasets Scaffolds Average Seq Length
333 201 294 480

Family's Representative Sequence

Representative Sequence 3300015261|Ga0182006_1000180|Ga0182006_100018057
Length 502
Sequence VYALLLDTHCLILKIKKMQLQDLLYGVTIKELVGKTDRQINALNFDSRKVGKDDIFFAMVGTLTDGHQFIEQTVQQGAGVIICENLPEIDDFTVTYIKVENTSVALGIMAGNYFGNPSADLKLIGITGTNGKTTIATILFKLFKDLGYKTGLLSTVENYINDTVVPATHTTPNPIALNQLLRDMVKAGCDYCFMEVSSHAVSQHRIEGLTFSGGVFSNLTHDHLDFHKTFDAYLKAKKAFFDMLPKSAFALTNIDDKNGMVMLQNTKAHKKTYALKQLADFKAKIIENQFSGLHLDIDNEDVYFKLVGSFNAYNLLAVYGTAILLEQDKLRVLTMLSRLSGAEGRFDYITSADKIIGIVDYAHTPDAVQNVLSTIANIRKGTEQVITVIGCGGDRDKTKRPIMAQVACDWSDKVILTSDNPRTEDAQAIIHDMEAGVSPTNKRKTLSILDRKEAIKTACHLAKPGDIILVAGKGHEKYQEINGVRNHFDDKEILLEQLKPIS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2738541283 Pedobacter sp. OK701 Isolate Unclassified
5 2738541284 Pedobacter sp. YR016 Isolate Unclassified
6 2738541302 Pedobacter sp. CF074 Isolate Unclassified
7 2738543023 Pedobacter sp. OK628 Isolate Unclassified
8 2739367651 Pedobacter sp. OK291 Isolate Unclassified
9 2739367656 Pedobacter sp. CF523 Isolate Unclassified
10 2739367663 Pedobacter sp. YR510 Isolate Unclassified
11 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
12 2818991437 Pedobacter terrae 518 Isolate Unclassified
13 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
14 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
15 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
16 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
17 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
18 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
19 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
20 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
21 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
22 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
23 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
24 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
25 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
26 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
27 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
28 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
29 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
30 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
31 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
32 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
33 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
34 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
35 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
36 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
37 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
38 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
39 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
40 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
41 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
42 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
43 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
44 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
45 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
46 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
47 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
48 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
49 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
50 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
51 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
52 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
53 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
54 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
55 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
57 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
58 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
59 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
60 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
61 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
62 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
63 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
64 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
65 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
66 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
67 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
68 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
69 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
70 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
71 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
72 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
73 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
74 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
75 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
76 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
78 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
79 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
82 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
83 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
84 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
85 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
86 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
87 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
88 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
89 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
90 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
91 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
94 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
95 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
96 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
97 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
98 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
99 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
100 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
101 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
102 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
103 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
104 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
105 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
106 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
107 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
108 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
111 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
136 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
137 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
138 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
139 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
140 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
141 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
142 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
143 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
144 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
145 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
146 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
147 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
148 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
149 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
150 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
151 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
152 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
153 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
154 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
155 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
156 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
157 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
158 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
159 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
160 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
161 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
162 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
163 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
164 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
165 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
166 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
167 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
168 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
169 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
170 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
171 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
172 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
173 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
174 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
175 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
176 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
177 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
178 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
179 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
180 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
181 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
182 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
185 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
190 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
194 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
195 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
196 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
197 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
198 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
199 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
200 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
201 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.99
Metatranscriptomes 0.3
Isolates 11.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.41
Nodule 0
Rhizoplane 0.9
Rhizosphere 81.08
Stem 0
Stem Tuber 0
Unclassified 9.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_136957 2162886007 Bacteria 3787
2 SwRhRL2b_contig_3607248 2162886007 Bacteria 3752
3 SwRhRL2b_contig_642379 2162886007 Bacteria 5638
4 JGI24737J22298_10003137 3300001990 Bacteria 5869
5 JGI24735J21928_10000003 3300002067 Bacteria 385983
6 JGI25162J39368_1003034 3300002737 Bacteria 5466
7 JGI25164J39214_1001442 3300002772 Bacteria 5508
8 JGI25152J39213_1000034 3300002773 Bacteria 94987
9 JGI25150J39212_1000001 3300002774 Bacteria 1318726
10 JGI25151J46595_10000001 3300003187 Bacteria 887211
11 JGI25153J46596_10000001 3300003215 Bacteria 748985
12 rootH1_10056681 3300003316 Bacteria 5278
13 rootH1_10056682 3300003316 Bacteria 4498
14 rootH2_10002321 3300003320 Bacteria 110257
15 rootH2_10208733 3300003320 Bacteria 1853
16 rootL2_10008182 3300003322 Bacteria 2435
17 rootH1_10001800 3300003323 Bacteria 72551
18 Ga0055536_1000024 3300003781 Bacteria 185534
19 Ga0055530_10005582 3300003791 Bacteria 5922
20 Ga0058863_10927834 3300004799 Bacteria 1896
21 Ga0065714_10002996 3300005288 Bacteria 11341
22 Ga0065714_10003623 3300005288 Bacteria 6518
23 Ga0065714_10008026 3300005288 Bacteria 3818
24 Ga0065714_10065033 3300005288 Bacteria 13724
25 Ga0065714_10066160 3300005288 Bacteria 7463
26 Ga0065714_10075823 3300005288 Bacteria 2861
27 Ga0065704_10000224 3300005289 Bacteria 74956
28 Ga0065704_10075815 3300005289 Bacteria 5387
29 Ga0070658_10000200 3300005327 Bacteria 52651
30 Ga0070658_10078791 3300005327 Bacteria 2705
31 Ga0070676_10002310 3300005328 Bacteria 9752
32 Ga0070689_100048188 3300005340 Bacteria 3286
33 Ga0070671_100026996 3300005355 Bacteria 4724
34 Ga0070673_100001797 3300005364 Bacteria 12796
35 Ga0070662_100000013 3300005457 Bacteria 125019
36 Ga0070681_10013968 3300005458 Bacteria 7990
37 Ga0068867_100000040 3300005459 Bacteria 78509
38 Ga0070685_10006994 3300005466 Bacteria 5757
39 Ga0068853_100014781 3300005539 Bacteria 6406
40 Ga0070672_100060094 3300005543 Bacteria 2992
41 Ga0070665_100000010 3300005548 Bacteria 529545
42 Ga0070665_100002768 3300005548 Bacteria 19006
43 Ga0068855_100000249 3300005563 Bacteria 67932
44 Ga0068855_100000856 3300005563 Bacteria 37762
45 Ga0068855_100015388 3300005563 Bacteria 9210
46 Ga0068855_100022323 3300005563 Bacteria 7583
47 Ga0068855_100043216 3300005563 Bacteria 5338
48 Ga0068855_100096536 3300005563 Bacteria 3405
49 Ga0068857_100008626 3300005577 Bacteria 8821
50 Ga0068854_100075503 3300005578 Bacteria 2475
51 Ga0068856_100000023 3300005614 Bacteria 141671
52 Ga0068856_100009673 3300005614 Bacteria 9361
53 Ga0068852_100018841 3300005616 Bacteria 5447
54 Ga0075366_10013071 3300006195 Bacteria 4721
55 Ga0075366_10028514 3300006195 Bacteria 3277
56 Ga0097621_100000011 3300006237 Bacteria 111116
57 Ga0068871_100000083 3300006358 Bacteria 53417
58 Ga0068865_100000335 3300006881 Bacteria 25989
59 Ga0105240_10000098 3300009093 Bacteria 178435
60 Ga0105240_10014441 3300009093 Bacteria 10784
61 Ga0105240_10080225 3300009093 Bacteria 4014
62 Ga0105241_10000657 3300009174 Bacteria 25953
63 Ga0105241_10006242 3300009174 Bacteria 8787
64 Ga0105241_10007201 3300009174 Bacteria 8186
65 Ga0105241_10078890 3300009174 Bacteria 2574
66 Ga0105242_10006768 3300009176 Bacteria 8840
67 Ga0105242_10210768 3300009176 Bacteria 1731
68 Ga0105237_10001062 3300009545 Bacteria 36906
69 Ga0105237_10001125 3300009545 Bacteria 35877
70 Ga0105237_10002005 3300009545 Bacteria 25911
71 Ga0105237_10005415 3300009545 Bacteria 14411
72 Ga0105237_10011528 3300009545 Bacteria 9350
73 Ga0105237_10253367 3300009545 Bacteria 1762
74 Ga0105237_10268726 3300009545 Bacteria 1708
75 Ga0105238_10002824 3300009551 Bacteria 17330
76 Ga0105239_10000007 3300010375 Bacteria 385297
77 Ga0105239_10001410 3300010375 Bacteria 32090
78 Ga0105239_10008297 3300010375 Bacteria 11837
79 Ga0105239_10015721 3300010375 Bacteria 8376
80 Ga0105239_10090633 3300010375 Bacteria 3373
81 Ga0105239_10097443 3300010375 Bacteria 3250
82 Ga0105246_10003845 3300011119 Bacteria 9105
83 Ga0157373_10003564 3300013100 Bacteria 11762
84 Ga0157373_10004594 3300013100 Bacteria 10387
85 Ga0157373_10007156 3300013100 Bacteria 8322
86 Ga0157371_10004699 3300013102 Bacteria 11802
87 Ga0157371_10009098 3300013102 Bacteria 7848
88 Ga0157371_10015739 3300013102 Bacteria 5662
89 Ga0157371_10016651 3300013102 Bacteria 5479
90 Ga0157371_10017612 3300013102 Bacteria 5301
91 Ga0157371_10142429 3300013102 Bacteria 1707
92 Ga0157370_10000531 3300013104 Bacteria 47724
93 Ga0157370_10000573 3300013104 Bacteria 45919
94 Ga0157370_10000693 3300013104 Bacteria 42077
95 Ga0157370_10018619 3300013104 Bacteria 6982
96 Ga0157370_10025653 3300013104 Bacteria 5832
97 Ga0157370_10044125 3300013104 Bacteria 4287
98 Ga0157370_10101485 3300013104 Bacteria 2695
99 Ga0157370_10124256 3300013104 Bacteria 2409
100 Ga0157369_10000402 3300013105 Bacteria 57623
101 Ga0157369_10001883 3300013105 Bacteria 25308
102 Ga0157374_10000988 3300013296 Bacteria 24642
103 Ga0157374_10001343 3300013296 Bacteria 20924
104 Ga0157378_10076986 3300013297 Bacteria 3007
105 Ga0163162_10000082 3300013306 Bacteria 86888
106 Ga0163162_10000558 3300013306 Bacteria 34481
107 Ga0163162_10016367 3300013306 Bacteria 7248
108 Ga0163162_10072381 3300013306 Bacteria 3502
109 Ga0157372_10000026 3300013307 Bacteria 195407
110 Ga0157372_10001395 3300013307 Bacteria 26028
111 Ga0157372_10001702 3300013307 Bacteria 23833
112 Ga0157372_10003174 3300013307 Bacteria 17725
113 Ga0157372_10005143 3300013307 Bacteria 13905
114 Ga0157372_10005604 3300013307 Bacteria 13351
115 Ga0157372_10010072 3300013307 Bacteria 10049
116 Ga0157375_10006520 3300013308 Bacteria 10157
117 Ga0157375_10013337 3300013308 Bacteria 7309
118 Ga0157375_10080675 3300013308 Bacteria 3292
119 Ga0157380_10000065 3300014326 Bacteria 60148
120 Ga0182008_10000006 3300014497 Bacteria 378521
121 Ga0182008_10000769 3300014497 Bacteria 22485
122 Ga0182008_10010927 3300014497 Bacteria 4842
123 Ga0182008_10025545 3300014497 Bacteria 2999
124 Ga0182008_10042647 3300014497 Bacteria 2260
125 Ga0182008_10046755 3300014497 Bacteria 2151
126 Ga0157376_10111210 3300014969 Bacteria 2412
127 Ga0182006_1000180 3300015261 Bacteria 66625
128 Ga0182006_1000361 3300015261 Bacteria 37999
129 Ga0182006_1002059 3300015261 Bacteria 11276
130 Ga0182006_1003500 3300015261 Bacteria 8008
131 Ga0182006_1011700 3300015261 Bacteria 3855
132 Ga0182006_1039877 3300015261 Bacteria 1851
133 Ga0182007_10000033 3300015262 Bacteria 139808
134 Ga0182007_10001529 3300015262 Bacteria 12365
135 Ga0182007_10013450 3300015262 Bacteria 3121
136 Ga0183373_1001 3300015682 Bacteria 1410374
137 Ga0163161_10000085 3300017792 Bacteria 93534
138 Ga0163161_10011757 3300017792 Bacteria 6070
139 Ga0163161_10020457 3300017792 Bacteria 4643
140 Ga0163161_10028042 3300017792 Bacteria 3997
141 Ga0163161_10056884 3300017792 Bacteria 2841
142 Ga0207427_100137 3300025231 Bacteria 88182
143 Ga0209437_100112 3300025233 Bacteria 214292
144 Ga0209437_100143 3300025233 Bacteria 164970
145 Ga0207425_1000002 3300025245 Bacteria 1362590
146 Ga0209026_1000490 3300025250 Bacteria 28944
147 Ga0209129_1000002 3300025258 Bacteria 1359086
148 Ga0209233_1000126 3300025261 Bacteria 214298
149 Ga0209233_1017793 3300025261 Bacteria 1927
150 Ga0209676_1000008 3300025292 Bacteria 991778
151 Ga0209025_1000004 3300025294 Bacteria 1361782
152 Ga0209758_1000006 3300025297 Bacteria 1359562
153 Ga0209050_1000055 3300025298 Bacteria 339254
154 Ga0207647_10000035 3300025904 Bacteria 99177
155 Ga0207647_10000742 3300025904 Bacteria 25591
156 Ga0207645_10000842 3300025907 Bacteria 25583
157 Ga0207705_10000257 3300025909 Bacteria 51549
158 Ga0207654_10001575 3300025911 Bacteria 11979
159 Ga0207707_10010248 3300025912 Bacteria 8135
160 Ga0207695_10000048 3300025913 Bacteria 421800
161 Ga0207695_10001625 3300025913 Bacteria 36435
162 Ga0207695_10050169 3300025913 Bacteria 4392
163 Ga0207695_10236032 3300025913 Bacteria 1731
164 Ga0207671_10000025 3300025914 Bacteria 271617
165 Ga0207671_10001589 3300025914 Bacteria 25825
166 Ga0207671_10002839 3300025914 Bacteria 18011
167 Ga0207671_10003081 3300025914 Bacteria 17014
168 Ga0207671_10004126 3300025914 Bacteria 14043
169 Ga0207671_10008197 3300025914 Bacteria 8905
170 Ga0207671_10010726 3300025914 Bacteria 7533
171 Ga0207652_10027397 3300025921 Bacteria 4749
172 Ga0207694_10058058 3300025924 Bacteria 3010
173 Ga0207644_10008314 3300025931 Bacteria 6801
174 Ga0207690_10000519 3300025932 Bacteria 25069
175 Ga0207706_10000454 3300025933 Bacteria 43636
176 Ga0207670_10034104 3300025936 Bacteria 3286
177 Ga0207704_10000019 3300025938 Bacteria 152734
178 Ga0207667_10000095 3300025949 Bacteria 143866
179 Ga0207667_10002951 3300025949 Bacteria 21107
180 Ga0207667_10022944 3300025949 Bacteria 6880
181 Ga0207667_10037419 3300025949 Bacteria 5186
182 Ga0207667_10109596 3300025949 Bacteria 2847
183 Ga0207667_10136260 3300025949 Bacteria 2528
184 Ga0207651_10000923 3300025960 Bacteria 12942
185 Ga0207639_10024912 3300026041 Bacteria 4335
186 Ga0207639_10178396 3300026041 Bacteria 1805
187 Ga0207702_10000258 3300026078 Bacteria 61221
188 Ga0207702_10033381 3300026078 Bacteria 4299
189 Ga0207648_10000220 3300026089 Bacteria 61703
190 Ga0207674_10017303 3300026116 Bacteria 7865
191 Ga0207683_10012722 3300026121 Bacteria 7180
192 Ga0207698_10003241 3300026142 Bacteria 9770
193 Ga0207698_10006709 3300026142 Bacteria 7192
194 Ga0268266_10000032 3300028379 Bacteria 395079
195 Ga0265318_10008455 3300028577 Bacteria 4581
196 Ga0307515_10031774 3300028794 Bacteria 8778
197 Ga0307515_10034033 3300028794 Bacteria 8363
198 Ga0265338_10030282 3300028800 Bacteria 5337
199 Ga0316177_1019498 3300030731 Bacteria 7221
200 Ga0316183_1115618 3300030742 Bacteria 53789
201 Ga0316181_1088948 3300030744 Bacteria 14104
202 Ga0307408_100001461 3300031548 Bacteria 17549
203 Ga0307408_100004451 3300031548 Bacteria 9515
204 Ga0307408_100014380 3300031548 Bacteria 5257
205 Ga0307405_10000003 3300031731 Bacteria 569064
206 Ga0307407_10000010 3300031903 Bacteria 186970
207 Ga0307412_10000055 3300031911 Bacteria 147100
208 Ga0307416_100000014 3300032002 Bacteria 249053
209 Ga0307414_10005858 3300032004 Bacteria 6797
210 Ga0307414_10018637 3300032004 Bacteria 4280
211 Ga0307414_10033054 3300032004 Bacteria 3414
212 Ga0307414_10068691 3300032004 Bacteria 2544
213 Ga0307507_10000883 3300033179 Bacteria 66623
214 Ga0307510_10001525 3300033180 Bacteria 25537
215 Ga0316582_0071073 3300036647 Unclassified 2253
216 Ga0316584_0000768 3300036712 Bacteria 17907
217 Ga0316584_0004808 3300036712 Bacteria 8973
218 Ga0316584_0075625 3300036712 Bacteria 2524
219 Ga0395899_0000055 3300037312 Bacteria 220579
220 Ga0395899_0025119 3300037312 Bacteria 4499
221 Ga0395900_0001045 3300037418 Bacteria 35498
222 Ga0395900_0017047 3300037418 Bacteria 7416
223 Ga0395900_0030286 3300037418 Bacteria 5555
224 Ga0395905_0000001 3300037471 Bacteria 2037079
225 Ga0395905_0000355 3300037471 Bacteria 65176
226 Ga0395905_0012756 3300037471 Bacteria 8083
227 Ga0395901_0003761 3300038443 Bacteria 15293
228 Ga0395901_0038141 3300038443 Bacteria 4970
229 Ga0436361_0958779 3300039447 Bacteria 5168
230 Ga0439448_0006983 3300042005 Bacteria 3257
231 Ga0451577_0000249 3300042876 Bacteria 106109
232 Ga0466969_0010051 3300044656 Bacteria 5019
233 Ga0466966_0017619 3300044684 Bacteria 4717
234 Ga0466961_0057880 3300044693 Bacteria 2466
235 Ga0453684_0030203 3300044712 Bacteria 7663
236 Ga0453684_0043751 3300044712 Bacteria 6010
237 Ga0451576_0056265 3300045051 Bacteria 4114
238 Ga0451576_0087155 3300045051 Unclassified 3247
239 Ga0495627_002586 3300046453 Bacteria 8556
240 Ga0495650_0000107 3300046471 Bacteria 200864
241 Ga0495585_0000014 3300046492 Bacteria 187513
242 Ga0495585_0004806 3300046492 Bacteria 8681
243 Ga0495583_0026876 3300046506 Bacteria 2847
244 Ga0495606_0000192 3300046507 Bacteria 107123
245 Ga0495606_0004518 3300046507 Bacteria 13848
246 Ga0495606_0071036 3300046507 Bacteria 2193
247 Ga0495610_0000051 3300046512 Bacteria 143715
248 Ga0495610_0006214 3300046512 Bacteria 8286
249 Ga0495610_0006245 3300046512 Bacteria 8261
250 Ga0495616_0000777 3300046513 Bacteria 23331
251 Ga0495616_0005597 3300046513 Bacteria 7690
252 Ga0495631_0002772 3300046518 Bacteria 9720
253 Ga0495643_0000586 3300046522 Bacteria 44354
254 Ga0495648_0006785 3300046524 Bacteria 9257
255 Ga0495609_0003482 3300046538 Bacteria 8997
256 Ga0495622_0051289 3300046557 Bacteria 1914
257 Ga0495633_0000015 3300046558 Bacteria 254484
258 Ga0495633_0001632 3300046558 Bacteria 16924
259 Ga0495668_0000041 3300046616 Bacteria 229462
260 Ga0495625_0000021 3300046660 Bacteria 282133
261 Ga0495625_0001041 3300046660 Bacteria 36452
262 Ga0495625_0002514 3300046660 Bacteria 19739
263 Ga0495625_0016836 3300046660 Bacteria 5740
264 Ga0495625_0065963 3300046660 Bacteria 2551
265 Ga0495661_0021734 3300046665 Bacteria 4178
266 Ga0495661_0030471 3300046665 Bacteria 3435
267 Ga0495661_0062548 3300046665 Bacteria 2204
268 Ga0495649_0000009 3300046694 Bacteria 451725
269 Ga0495687_003296 3300047443 Bacteria 11866
270 Ga0495673_0012814 3300047469 Bacteria 4426
271 Ga0495681_0031108 3300047470 Bacteria 2708
272 Ga0495686_0000220 3300047472 Bacteria 104967
273 Ga0495686_0002322 3300047472 Bacteria 18183
274 Ga0495686_0051356 3300047472 Bacteria 2587
275 Ga0496114_0001368 3300048917 Bacteria 18465
276 Ga0496115_0014236 3300048918 Bacteria 6020
277 Ga0496122_0000404 3300048925 Bacteria 91618
278 Ga0496123_0002530 3300048926 Bacteria 22414
279 Ga0496125_0000761 3300048928 Bacteria 52765
280 Ga0495682_0005711 3300049460 Bacteria 5137
281 Ga0501034_0055080 3300049571 Bacteria 4003
282 Ga0501036_0014050 3300049572 Bacteria 6655
283 Ga0501047_0026163 3300049581 Bacteria 5613
284 Ga0501223_000184 3300049663 Bacteria 16387
285 Ga0501080_0019092 3300049742 Bacteria 6347
286 Ga0501241_004103 3300049758 Bacteria 2737
287 Ga0501035_0003585 3300049822 Bacteria 14829
288 nmdc:mga0k408_1529_c1 3300050493 Bacteria 12494
289 nmdc:mga0k408_2059_c2 3300050493 Bacteria 7365
290 Ga0500651_0000279 3300053093 Bacteria 30029
291 Ga0500641_0000988 3300053096 Bacteria 10100
292 Ga0500608_002452 3300053122 Bacteria 6747
293 Ga0500608_035695 3300053122 Bacteria 2371
294 Ga0500618_000050 3300053125 Bacteria 105238

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046665 Ga0495661_0030471 Ga0495661_0030471_2201_3418 405
2 3300053122 Ga0500608_035695 Ga0500608_035695_31_1248 405
3 iso_pu_bacteria 2895498888 2895502154 423
4 3300032004 Ga0307414_10068691 Ga0307414_100686912 448
5 3300046524 Ga0495648_0006785 Ga0495648_0006785_7894_9240 448
6 3300049758 Ga0501241_004103 Ga0501241_004103_1366_2727 453
7 3300005548 Ga0070665_100000010 Ga0070665_100000010331 460
8 3300005563 Ga0068855_100043216 Ga0068855_1000432164 460
9 3300009093 Ga0105240_10014441 Ga0105240_100144412 460
10 3300010375 Ga0105239_10097443 Ga0105239_100974432 460
11 3300025913 Ga0207695_10001625 Ga0207695_100016259 460
12 3300025949 Ga0207667_10037419 Ga0207667_100374192 460
13 3300028379 Ga0268266_10000032 Ga0268266_10000032245 460
14 3300042005 Ga0439448_0006983 Ga0439448_0006983_1447_2904 460
15 3300003320 rootH2_10002321 rootH2_1000232162 461
16 3300005328 Ga0070676_10002310 Ga0070676_100023103 461
17 3300005364 Ga0070673_100001797 Ga0070673_10000179712 461
18 3300005457 Ga0070662_100000013 Ga0070662_100000013102 461
19 3300005459 Ga0068867_100000040 Ga0068867_10000004028 461
20 3300005539 Ga0068853_100014781 Ga0068853_1000147815 461
21 3300005543 Ga0070672_100060094 Ga0070672_1000600942 461
22 3300006237 Ga0097621_100000011 Ga0097621_10000001140 461
23 3300006358 Ga0068871_100000083 Ga0068871_10000008321 461
24 3300006881 Ga0068865_100000335 Ga0068865_10000033514 461
25 3300009174 Ga0105241_10000657 Ga0105241_100006576 461
26 3300009174 Ga0105241_10007201 Ga0105241_100072013 461
27 3300009176 Ga0105242_10006768 Ga0105242_100067684 461
28 3300009545 Ga0105237_10002005 Ga0105237_1000200513 461
29 3300009551 Ga0105238_10002824 Ga0105238_1000282413 461
30 3300010375 Ga0105239_10090633 Ga0105239_100906332 461
31 3300011119 Ga0105246_10003845 Ga0105246_100038452 461
32 3300013296 Ga0157374_10000988 Ga0157374_1000098811 461
33 3300013296 Ga0157374_10001343 Ga0157374_100013435 461
34 3300013306 Ga0163162_10000082 Ga0163162_1000008258 461
35 3300013308 Ga0157375_10013337 Ga0157375_100133373 461
36 3300025904 Ga0207647_10000742 Ga0207647_100007428 461
37 3300025907 Ga0207645_10000842 Ga0207645_100008423 461
38 3300025914 Ga0207671_10008197 Ga0207671_100081976 461
39 3300025933 Ga0207706_10000454 Ga0207706_1000045427 461
40 3300025938 Ga0207704_10000019 Ga0207704_1000001918 461
41 3300025949 Ga0207667_10136260 Ga0207667_101362602 461
42 3300025960 Ga0207651_10000923 Ga0207651_1000092312 461
43 3300026041 Ga0207639_10024912 Ga0207639_100249122 461
44 3300026041 Ga0207639_10178396 Ga0207639_101783962 461
45 3300026089 Ga0207648_10000220 Ga0207648_1000022039 461
46 3300026121 Ga0207683_10012722 Ga0207683_100127224 461
47 3300026142 Ga0207698_10003241 Ga0207698_1000324111 461
48 3300037418 Ga0395900_0030286 Ga0395900_0030286_914_2374 461
49 3300037471 Ga0395905_0012756 Ga0395905_0012756_2113_3573 461
50 3300038443 Ga0395901_0038141 Ga0395901_0038141_329_1789 461
51 3300039447 Ga0436361_0958779 Ga0436361_0958779_2091_3551 461
52 3300047443 Ga0495687_003296 Ga0495687_003296_7226_8683 461
53 3300005355 Ga0070671_100026996 Ga0070671_1000269962 462
54 3300014326 Ga0157380_10000065 Ga0157380_1000006541 462
55 3300025931 Ga0207644_10008314 Ga0207644_100083142 462
56 3300049742 Ga0501080_0019092 Ga0501080_0019092_2613_4091 462
57 3300009174 Ga0105241_10078890 Ga0105241_100788902 463
58 3300009545 Ga0105237_10001062 Ga0105237_1000106225 463
59 3300025914 Ga0207671_10004126 Ga0207671_100041262 463
60 3300033180 Ga0307510_10001525 Ga0307510_1000152511 463
61 3300046518 Ga0495631_0002772 Ga0495631_0002772_3021_4481 463
62 3300053122 Ga0500608_002452 Ga0500608_002452_4553_6013 463
63 3300013297 Ga0157378_10076986 Ga0157378_100769862 464
64 3300013308 Ga0157375_10080675 Ga0157375_100806753 464
65 3300036712 Ga0316584_0075625 Ga0316584_0075625_412_1812 465
66 3300028800 Ga0265338_10030282 Ga0265338_100302823 467
67 3300013307 Ga0157372_10010072 Ga0157372_100100722 468
68 3300037471 Ga0395905_0000001 Ga0395905_0000001_684252_685667 470
69 iso_pu_bacteria 2842903701 2842907765 470
70 3300005563 Ga0068855_100096536 Ga0068855_1000965362 472
71 3300014497 Ga0182008_10042647 Ga0182008_100426472 472
72 3300013105 Ga0157369_10000402 Ga0157369_1000040247 473
73 3300013307 Ga0157372_10000026 Ga0157372_1000002690 473
74 3300037312 Ga0395899_0000055 Ga0395899_0000055_133951_135414 473
75 3300044656 Ga0466969_0010051 Ga0466969_0010051_1754_3214 473
76 3300044684 Ga0466966_0017619 Ga0466966_0017619_1746_3206 473
77 3300044693 Ga0466961_0057880 Ga0466961_0057880_274_1734 473
78 3300049663 Ga0501223_000184 Ga0501223_000184_5282_6745 474
79 3300003316 rootH1_10056682 rootH1_100566822 475
80 3300005563 Ga0068855_100000249 Ga0068855_10000024963 476
81 3300025949 Ga0207667_10000095 Ga0207667_1000009557 476
82 3300003781 Ga0055536_1000024 Ga0055536_10000244 477
83 3300003791 Ga0055530_10005582 Ga0055530_100055822 477
84 3300015682 Ga0183373_1001 Ga0183373_1001361 477
85 3300025292 Ga0209676_1000008 Ga0209676_1000008265 477
86 3300025298 Ga0209050_1000055 Ga0209050_1000055147 477
87 3300049571 Ga0501034_0055080 Ga0501034_0055080_1521_2975 478
88 iso_pu_bacteria 2881955468 2881956649 479
89 iso_pu_bacteria 2890804823 2890805168 479
90 iso_pu_bacteria 2738543023 2739302389 480
91 iso_pu_bacteria 2839989709 2839992406 480
92 iso_pu_bacteria 2896344016 2896345181 480
93 3300045051 Ga0451576_0087155 Ga0451576_0087155_1039_2487 481
94 iso_pu_bacteria 2585427687 2586209578 481
95 iso_pu_bacteria 2738541283 2738756958 481
96 iso_pu_bacteria 2738541284 2738760267 481
97 iso_pu_bacteria 2738541302 2738852126 481
98 iso_pu_bacteria 2739367651 2739589698 481
99 iso_pu_bacteria 2739367656 2739616480 481
100 iso_pu_bacteria 2739367663 2739647127 481
101 iso_pu_bacteria 2775506987 2776612317 481
102 iso_pu_bacteria 2818991437 2819546664 481
103 iso_pu_bacteria 2849281842 2849281894 481
104 iso_pu_bacteria 2852627209 2852631431 481
105 iso_pu_bacteria 2857627736 2857629605 481
106 iso_pu_bacteria 2881247448 2881250652 481
107 iso_pu_bacteria 2902048731 2902052347 481
108 iso_pu_bacteria 2904445276 2904446802 481
109 iso_pu_bacteria 2919186247 2919189539 481
110 iso_pu_bacteria 2939664404 2939667765 481
111 iso_pu_bacteria 2945997725 2946002276 481
112 iso_pu_bacteria 2958512119 2958514060 481
113 iso_pu_bacteria 2977232053 2977233838 481
114 3300036647 Ga0316582_0071073 Ga0316582_0071073_511_1962 482
115 iso_pu_bacteria 2599185184 2599479576 482
116 iso_pu_bacteria 2842722452 2842725359 482
117 iso_pu_bacteria 2842909656 2842912636 482
118 iso_pu_bacteria 2852623160 2852625189 482
119 iso_pu_bacteria 2884933994 2884934204 482
120 iso_pu_bacteria 2919437846 2919438134 482
121 iso_pu_bacteria 2919509842 2919510288 482
122 iso_pu_bacteria 2928078545 2928083872 482
123 iso_pu_bacteria 2928147474 2928152313 482
124 iso_pu_bacteria 2932082852 2932084877 482
125 iso_pu_bacteria 2954016120 2954019175 482
126 iso_pu_bacteria 2965320100 2965322866 482
127 3300005327 Ga0070658_10000200 Ga0070658_1000020011 483
128 3300005563 Ga0068855_100022323 Ga0068855_1000223233 483
129 3300025909 Ga0207705_10000257 Ga0207705_1000025737 483
130 3300025949 Ga0207667_10109596 Ga0207667_101095962 483
131 3300031548 Ga0307408_100014380 Ga0307408_1000143804 483
132 3300036712 Ga0316584_0000768 Ga0316584_0000768_13282_14733 483
133 3300037418 Ga0395900_0001045 Ga0395900_0001045_20776_22230 483
134 3300005288 Ga0065714_10008026 Ga0065714_100080263 484
135 3300005563 Ga0068855_100000856 Ga0068855_10000085629 484
136 3300013308 Ga0157375_10006520 Ga0157375_100065207 484
137 3300025949 Ga0207667_10002951 Ga0207667_1000295111 484
138 3300031548 Ga0307408_100001461 Ga0307408_1000014616 484
139 3300031548 Ga0307408_100004451 Ga0307408_1000044512 484
140 2162886007 SwRhRL2b_contig_136957 SwRhRL2b_0255.00006010 485
141 2162886007 SwRhRL2b_contig_3607248 SwRhRL2b_0772.00008070 485
142 2162886007 SwRhRL2b_contig_642379 SwRhRL2b_0210.00001670 485
143 3300001990 JGI24737J22298_10003137 JGI24737J22298_100031372 485
144 3300002067 JGI24735J21928_10000003 JGI24735J21928_10000003197 485
145 3300002737 JGI25162J39368_1003034 JGI25162J39368_10030344 485
146 3300002772 JGI25164J39214_1001442 JGI25164J39214_10014424 485
147 3300002773 JGI25152J39213_1000034 JGI25152J39213_100003470 485
148 3300002774 JGI25150J39212_1000001 JGI25150J39212_1000001187 485
149 3300003187 JGI25151J46595_10000001 JGI25151J46595_10000001612 485
150 3300003215 JGI25153J46596_10000001 JGI25153J46596_10000001501 485
151 3300003316 rootH1_10056681 rootH1_100566814 485
152 3300003320 rootH2_10208733 rootH2_102087332 485
153 3300003322 rootL2_10008182 rootL2_100081822 485
154 3300003323 rootH1_10001800 rootH1_1000180043 485
155 3300004799 Ga0058863_10927834 Ga0058863_109278342 485
156 3300005288 Ga0065714_10002996 Ga0065714_100029963 485
157 3300005288 Ga0065714_10003623 Ga0065714_100036233 485
158 3300005288 Ga0065714_10065033 Ga0065714_100650335 485
159 3300005288 Ga0065714_10066160 Ga0065714_100661605 485
160 3300005288 Ga0065714_10075823 Ga0065714_100758232 485
161 3300005289 Ga0065704_10000224 Ga0065704_100002248 485
162 3300005289 Ga0065704_10075815 Ga0065704_100758152 485
163 3300005327 Ga0070658_10078791 Ga0070658_100787912 485
164 3300005340 Ga0070689_100048188 Ga0070689_1000481883 485
165 3300005458 Ga0070681_10013968 Ga0070681_100139683 485
166 3300005466 Ga0070685_10006994 Ga0070685_100069943 485
167 3300005548 Ga0070665_100002768 Ga0070665_10000276818 485
168 3300005563 Ga0068855_100015388 Ga0068855_1000153883 485
169 3300005577 Ga0068857_100008626 Ga0068857_1000086264 485
170 3300005578 Ga0068854_100075503 Ga0068854_1000755032 485
171 3300005614 Ga0068856_100000023 Ga0068856_10000002335 485
172 3300005614 Ga0068856_100009673 Ga0068856_1000096738 485
173 3300005616 Ga0068852_100018841 Ga0068852_1000188413 485
174 3300006195 Ga0075366_10013071 Ga0075366_100130714 485
175 3300006195 Ga0075366_10028514 Ga0075366_100285143 485
176 3300009093 Ga0105240_10000098 Ga0105240_1000009894 485
177 3300009093 Ga0105240_10080225 Ga0105240_100802253 485
178 3300009174 Ga0105241_10006242 Ga0105241_100062422 485
179 3300009176 Ga0105242_10210768 Ga0105242_102107681 485
180 3300009545 Ga0105237_10001125 Ga0105237_1000112513 485
181 3300009545 Ga0105237_10005415 Ga0105237_100054155 485
182 3300009545 Ga0105237_10011528 Ga0105237_100115283 485
183 3300009545 Ga0105237_10253367 Ga0105237_102533672 485
184 3300009545 Ga0105237_10268726 Ga0105237_102687262 485
185 3300010375 Ga0105239_10000007 Ga0105239_10000007307 485
186 3300010375 Ga0105239_10001410 Ga0105239_100014104 485
187 3300010375 Ga0105239_10008297 Ga0105239_100082973 485
188 3300010375 Ga0105239_10015721 Ga0105239_100157214 485
189 3300013100 Ga0157373_10003564 Ga0157373_100035645 485
190 3300013100 Ga0157373_10004594 Ga0157373_100045947 485
191 3300013100 Ga0157373_10007156 Ga0157373_100071563 485
192 3300013102 Ga0157371_10004699 Ga0157371_100046993 485
193 3300013102 Ga0157371_10009098 Ga0157371_100090982 485
194 3300013102 Ga0157371_10015739 Ga0157371_100157392 485
195 3300013102 Ga0157371_10016651 Ga0157371_100166514 485
196 3300013102 Ga0157371_10017612 Ga0157371_100176122 485
197 3300013102 Ga0157371_10142429 Ga0157371_101424292 485
198 3300013104 Ga0157370_10000531 Ga0157370_1000053121 485
199 3300013104 Ga0157370_10000573 Ga0157370_1000057331 485
200 3300013104 Ga0157370_10000693 Ga0157370_1000069313 485
201 3300013104 Ga0157370_10018619 Ga0157370_100186192 485
202 3300013104 Ga0157370_10025653 Ga0157370_100256533 485
203 3300013104 Ga0157370_10044125 Ga0157370_100441252 485
204 3300013104 Ga0157370_10101485 Ga0157370_101014852 485
205 3300013104 Ga0157370_10124256 Ga0157370_101242562 485
206 3300013105 Ga0157369_10001883 Ga0157369_1000188316 485
207 3300013306 Ga0163162_10000558 Ga0163162_100005584 485
208 3300013306 Ga0163162_10016367 Ga0163162_100163675 485
209 3300013306 Ga0163162_10072381 Ga0163162_100723812 485
210 3300013307 Ga0157372_10001395 Ga0157372_1000139510 485
211 3300013307 Ga0157372_10001702 Ga0157372_100017022 485
212 3300013307 Ga0157372_10003174 Ga0157372_1000317410 485
213 3300013307 Ga0157372_10005143 Ga0157372_100051434 485
214 3300013307 Ga0157372_10005604 Ga0157372_100056047 485
215 3300014497 Ga0182008_10000006 Ga0182008_10000006185 485
216 3300014497 Ga0182008_10000769 Ga0182008_100007692 485
217 3300014497 Ga0182008_10010927 Ga0182008_100109272 485
218 3300014497 Ga0182008_10025545 Ga0182008_100255452 485
219 3300014497 Ga0182008_10046755 Ga0182008_100467552 485
220 3300014969 Ga0157376_10111210 Ga0157376_101112102 485
221 3300015261 Ga0182006_1000180 Ga0182006_100018057 485
222 3300015261 Ga0182006_1000361 Ga0182006_100036122 485
223 3300015261 Ga0182006_1002059 Ga0182006_10020592 485
224 3300015261 Ga0182006_1003500 Ga0182006_10035004 485
225 3300015261 Ga0182006_1011700 Ga0182006_10117002 485
226 3300015261 Ga0182006_1039877 Ga0182006_10398772 485
227 3300015262 Ga0182007_10000033 Ga0182007_1000003315 485
228 3300015262 Ga0182007_10001529 Ga0182007_100015296 485
229 3300015262 Ga0182007_10013450 Ga0182007_100134502 485
230 3300017792 Ga0163161_10000085 Ga0163161_100000852 485
231 3300017792 Ga0163161_10011757 Ga0163161_100117572 485
232 3300017792 Ga0163161_10020457 Ga0163161_100204574 485
233 3300017792 Ga0163161_10028042 Ga0163161_100280422 485
234 3300017792 Ga0163161_10056884 Ga0163161_100568842 485
235 3300025231 Ga0207427_100137 Ga0207427_1001374 485
236 3300025233 Ga0209437_100112 Ga0209437_10011262 485
237 3300025233 Ga0209437_100143 Ga0209437_100143120 485
238 3300025245 Ga0207425_1000002 Ga0207425_1000002976 485
239 3300025250 Ga0209026_1000490 Ga0209026_100049019 485
240 3300025258 Ga0209129_1000002 Ga0209129_1000002976 485
241 3300025261 Ga0209233_1000126 Ga0209233_1000126119 485
242 3300025261 Ga0209233_1017793 Ga0209233_10177932 485
243 3300025294 Ga0209025_1000004 Ga0209025_1000004214 485
244 3300025297 Ga0209758_1000006 Ga0209758_1000006214 485
245 3300025904 Ga0207647_10000035 Ga0207647_1000003575 485
246 3300025911 Ga0207654_10001575 Ga0207654_100015759 485
247 3300025912 Ga0207707_10010248 Ga0207707_100102482 485
248 3300025913 Ga0207695_10000048 Ga0207695_10000048343 485
249 3300025913 Ga0207695_10050169 Ga0207695_100501692 485
250 3300025913 Ga0207695_10236032 Ga0207695_102360322 485
251 3300025914 Ga0207671_10000025 Ga0207671_1000002597 485
252 3300025914 Ga0207671_10001589 Ga0207671_1000158910 485
253 3300025914 Ga0207671_10002839 Ga0207671_1000283915 485
254 3300025914 Ga0207671_10003081 Ga0207671_100030819 485
255 3300025914 Ga0207671_10010726 Ga0207671_100107263 485
256 3300025921 Ga0207652_10027397 Ga0207652_100273973 485
257 3300025924 Ga0207694_10058058 Ga0207694_100580581 485
258 3300025932 Ga0207690_10000519 Ga0207690_100005195 485
259 3300025936 Ga0207670_10034104 Ga0207670_100341042 485
260 3300025949 Ga0207667_10022944 Ga0207667_100229444 485
261 3300026078 Ga0207702_10000258 Ga0207702_1000025849 485
262 3300026078 Ga0207702_10033381 Ga0207702_100333813 485
263 3300026116 Ga0207674_10017303 Ga0207674_100173033 485
264 3300026142 Ga0207698_10006709 Ga0207698_100067094 485
265 3300028577 Ga0265318_10008455 Ga0265318_100084553 485
266 3300028794 Ga0307515_10031774 Ga0307515_100317744 485
267 3300028794 Ga0307515_10034033 Ga0307515_100340332 485
268 3300030731 Ga0316177_1019498 Ga0316177_10194982 485
269 3300030742 Ga0316183_1115618 Ga0316183_111561833 485
270 3300030744 Ga0316181_1088948 Ga0316181_10889485 485
271 3300031731 Ga0307405_10000003 Ga0307405_10000003397 485
272 3300031903 Ga0307407_10000010 Ga0307407_1000001018 485
273 3300031911 Ga0307412_10000055 Ga0307412_10000055113 485
274 3300032002 Ga0307416_100000014 Ga0307416_100000014213 485
275 3300032004 Ga0307414_10005858 Ga0307414_100058584 485
276 3300032004 Ga0307414_10018637 Ga0307414_100186373 485
277 3300032004 Ga0307414_10033054 Ga0307414_100330542 485
278 3300033179 Ga0307507_10000883 Ga0307507_1000088310 485
279 3300036712 Ga0316584_0004808 Ga0316584_0004808_434_1897 485
280 3300037312 Ga0395899_0025119 Ga0395899_0025119_835_2295 485
281 3300037418 Ga0395900_0017047 Ga0395900_0017047_3726_5186 485
282 3300037471 Ga0395905_0000355 Ga0395905_0000355_51278_52738 485
283 3300038443 Ga0395901_0003761 Ga0395901_0003761_1002_2462 485
284 3300042876 Ga0451577_0000249 Ga0451577_0000249_98221_99684 485
285 3300044712 Ga0453684_0030203 Ga0453684_0030203_4856_6322 485
286 3300044712 Ga0453684_0043751 Ga0453684_0043751_823_2280 485
287 3300045051 Ga0451576_0056265 Ga0451576_0056265_20_1477 485
288 3300046453 Ga0495627_002586 Ga0495627_002586_6271_7731 485
289 3300046471 Ga0495650_0000107 Ga0495650_0000107_40299_41759 485
290 3300046492 Ga0495585_0000014 Ga0495585_0000014_102959_104419 485
291 3300046492 Ga0495585_0004806 Ga0495585_0004806_4355_5815 485
292 3300046506 Ga0495583_0026876 Ga0495583_0026876_907_2367 485
293 3300046507 Ga0495606_0000192 Ga0495606_0000192_23842_25302 485
294 3300046507 Ga0495606_0004518 Ga0495606_0004518_8904_10364 485
295 3300046507 Ga0495606_0071036 Ga0495606_0071036_139_1596 485
296 3300046512 Ga0495610_0000051 Ga0495610_0000051_107018_108475 485
297 3300046512 Ga0495610_0006214 Ga0495610_0006214_5793_7250 485
298 3300046512 Ga0495610_0006245 Ga0495610_0006245_4753_6213 485
299 3300046513 Ga0495616_0000777 Ga0495616_0000777_15326_16786 485
300 3300046513 Ga0495616_0005597 Ga0495616_0005597_4273_5736 485
301 3300046522 Ga0495643_0000586 Ga0495643_0000586_14146_15609 485
302 3300046538 Ga0495609_0003482 Ga0495609_0003482_7382_8842 485
303 3300046557 Ga0495622_0051289 Ga0495622_0051289_339_1799 485
304 3300046558 Ga0495633_0000015 Ga0495633_0000015_50270_51730 485
305 3300046558 Ga0495633_0001632 Ga0495633_0001632_14625_16085 485
306 3300046616 Ga0495668_0000041 Ga0495668_0000041_171510_172970 485
307 3300046660 Ga0495625_0000021 Ga0495625_0000021_185059_186519 485
308 3300046660 Ga0495625_0001041 Ga0495625_0001041_9363_10823 485
309 3300046660 Ga0495625_0002514 Ga0495625_0002514_9122_10582 485
310 3300046660 Ga0495625_0016836 Ga0495625_0016836_1293_2756 485
311 3300046660 Ga0495625_0065963 Ga0495625_0065963_941_2404 485
312 3300046665 Ga0495661_0021734 Ga0495661_0021734_940_2400 485
313 3300046665 Ga0495661_0062548 Ga0495661_0062548_39_1499 485
314 3300046694 Ga0495649_0000009 Ga0495649_0000009_273007_274467 485
315 3300047469 Ga0495673_0012814 Ga0495673_0012814_2876_4336 485
316 3300047470 Ga0495681_0031108 Ga0495681_0031108_618_2075 485
317 3300047472 Ga0495686_0000220 Ga0495686_0000220_61793_63253 485
318 3300047472 Ga0495686_0002322 Ga0495686_0002322_1859_3319 485
319 3300047472 Ga0495686_0051356 Ga0495686_0051356_366_1826 485
320 3300048917 Ga0496114_0001368 Ga0496114_0001368_11020_12486 485
321 3300048918 Ga0496115_0014236 Ga0496115_0014236_2923_4383 485
322 3300048925 Ga0496122_0000404 Ga0496122_0000404_11969_13426 485
323 3300048926 Ga0496123_0002530 Ga0496123_0002530_17114_18571 485
324 3300048928 Ga0496125_0000761 Ga0496125_0000761_42335_43795 485
325 3300049460 Ga0495682_0005711 Ga0495682_0005711_2039_3499 485
326 3300049572 Ga0501036_0014050 Ga0501036_0014050_1269_2732 485
327 3300049581 Ga0501047_0026163 Ga0501047_0026163_3094_4557 485
328 3300049822 Ga0501035_0003585 Ga0501035_0003585_8575_10038 485
329 3300050493 nmdc:mga0k408_1529_c1 nmdc:mga0k408_1529_c1_7354_8814 485
330 3300050493 nmdc:mga0k408_2059_c2 nmdc:mga0k408_2059_c2_600_2060 485
331 3300053093 Ga0500651_0000279 Ga0500651_0000279_11740_13197 485
332 3300053096 Ga0500641_0000988 Ga0500641_0000988_6899_8359 485
333 3300053125 Ga0500618_000050 Ga0500618_000050_59546_61006 485

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08245

Mur_ligase_M

Mur ligase middle domain

126

322

0.95

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

344

474

0.94

PF01225

Mur_ligase

Mur ligase family, catalytic domain

39

114

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bub-assembly1.cif.gz_A crystal structure of mure ligase from thermotoga maritima in complex with adp 0.915 12 484
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9105 1 483
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9051 1 483
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.887 18 482
2xja-assembly1.cif.gz_A structure of mure from m.tuberculosis with dipeptide and adp 0.8856 1 485
ID Description Score Start End Superfamily
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9611 100 328 3.40.1190.10
4c12A03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9487 338 483 3.90.190.20
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9392 330 474 3.90.190.20
2wtzA03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9364 328 485 3.90.190.20
4c13A01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.936 1 94 3.40.1390.10
ID Description Score Start End GO Terms
AF-A0A3D4BQ75-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9914 1 353 GO:0005524
GO:0005737
GO:0008360
GO:0009252
GO:0016881
GO:0051301
AF-A0A519VWA6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9881 1 89 GO:0009058
GO:0016881
AF-A0A3D4BQ75-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9859 1 353 GO:0005524
GO:0005737
GO:0008360
GO:0009252
GO:0016881
GO:0051301
AF-K1UK52-F1-model_v4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9856 235 445 GO:0005524
GO:0009058
GO:0016881
AF-A0A3D0FMH2-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9848 1 242 GO:0005524
GO:0005737
GO:0008360
GO:0009058
GO:0016881
GO:0051301

Feature Viewer

pLDDT pTM Quality
94.21 0.91 High
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Predicted Structure (AlphaFold2)

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