F410751

General Info

Members Datasets Scaffolds Average Seq Length
331 225 280 430

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8036736890|8036737855
Length 477
Sequence AVIGQGYVGLPLAIEFSQHFPVLGFDINKERVQELNAGQDRTLEADLQKLNEGIATAKTTNFTKGYKASCDIEDLTQARIYIVTVPTPIDRFNAPNLTPLLKASEMLGNVLKKGDIVIYESTVYPGCTEEDCVPVLEKHSGLVFNQDFYVGYSPERINPGDKVNTLTTIKKVTSGSTPEIAEEIDQLYKTIITAGTHKAPNIKVAEASKAIENAQRDVNISFVNELALIFDRIGIDTNDVLEAAGTKFNFLKYKPGLVGGHCISVDPYYLAHKATQLGYYPDVILSGRRVNDSVAAFIASKVVKLMIKKGTVVQGAKALILGVTFKENCPDVRNTKVVDVYRELKEYGVNVDVYDPWADAEEVQHKYGITCHSELPCHPELSEDSRALLEQAKQSHSERATVVSSLSSCHPELVEGSQPTDSTIQQSNDSTPKYDAIIVAVAHNEFLTLDINKLKNDQAVVYDIKACLDRELVDARL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
3 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
4 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
5 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
6 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
7 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
8 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
9 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
10 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
11 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
12 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
13 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
14 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
15 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
16 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
17 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
18 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
19 2738541284 Pedobacter sp. YR016 Isolate Unclassified
20 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
21 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
22 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
23 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
24 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
25 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
26 2818991437 Pedobacter terrae 518 Isolate Unclassified
27 2818991444 Filimonas endophytica 3197 Isolate Unclassified
28 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
29 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
30 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
31 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
32 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
33 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
34 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
35 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
36 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
37 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
38 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
39 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
40 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
41 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
42 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
43 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
44 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
45 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
46 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
47 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
48 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
49 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
50 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
51 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
52 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
53 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
54 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
55 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
56 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
57 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
58 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
59 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
60 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
61 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
62 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
63 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
64 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
65 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
66 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
67 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
68 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
69 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
70 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
71 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
72 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
73 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
74 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
75 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
76 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
77 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
78 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
79 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
80 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
81 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
82 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
83 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
84 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
85 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
86 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
87 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
88 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
89 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
90 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
91 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
92 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
93 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
94 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
95 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
96 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
97 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
98 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
99 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
100 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
101 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
102 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
103 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
104 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
105 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
106 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
107 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
108 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
109 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
110 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
111 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
112 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
113 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
114 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
115 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
116 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
117 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
118 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
119 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
120 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
121 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
122 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
123 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
124 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
125 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
126 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
128 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
129 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
130 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
132 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
151 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
152 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
153 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
154 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
155 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
156 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
157 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
158 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
159 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
160 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
161 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
162 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
163 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
164 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
165 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
166 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
167 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
168 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
169 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
170 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
171 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
172 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
173 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
174 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
175 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
176 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
177 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
178 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
179 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
180 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
181 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
182 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
183 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
184 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
185 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
186 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
187 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
188 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
189 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
190 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
191 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
192 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
193 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
194 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
195 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
196 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
197 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
198 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
199 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
200 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
201 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
202 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
203 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
204 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
205 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
206 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
207 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
208 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
209 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
210 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
211 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
212 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
213 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
214 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
215 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
216 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
217 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
218 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
219 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
220 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
221 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
222 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
223 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
224 646564506 Arcobacter nitrofigilis DSM 7299 Isolate Unclassified
225 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.08
Metatranscriptomes 1.21
Isolates 15.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.62
Nodule 0.3
Rhizoplane 0.6
Rhizosphere 63.14
Stem 0
Stem Tuber 0
Unclassified 19.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1137231 2162886007 Bacteria 2268
2 JGI24739J22299_10008864 3300001989 Bacteria 3750
3 JGI25162J39368_1000204 3300002737 Bacteria 62620
4 JGI25154J39366_1000003 3300002738 Bacteria 397627
5 JGI25157J39369_1002794 3300002741 Bacteria 3984
6 JGI25164J39214_1000712 3300002772 Bacteria 12758
7 JGI25150J39212_1000023 3300002774 Bacteria 130663
8 JGI25151J46595_10000082 3300003187 Bacteria 130832
9 JGI25165J46597_1001221 3300003214 Bacteria 15391
10 JGI25153J46596_10000060 3300003215 Bacteria 131744
11 JGI25153J46596_10024305 3300003215 Bacteria 2187
12 rootH1_10107018 3300003316 Bacteria 1672
13 rootH1_10107018 3300003323 Bacteria 1670
14 rootH2_10008573 3300003320 Bacteria 5807
15 rootH2_10028284 3300003320 Bacteria 6359
16 rootH2_10028634 3300003320 Bacteria 4963
17 rootH2_10040683 3300003320 Bacteria 12908
18 rootH2_10042620 3300003320 Bacteria 1924
19 rootH1_10014058 3300003323 Bacteria 71578
20 rootH1_10028670 3300003323 Bacteria 7115
21 rootH1_10070863 3300003323 Bacteria 3819
22 JGI25160J50197_1001506 3300003354 Bacteria 11577
23 JGI25160J50197_1002210 3300003354 Bacteria 9140
24 JGI25160J50197_1009966 3300003354 Bacteria 3477
25 Ga0006562J51391_1029364 3300003578 Bacteria 2200
26 Ga0055526_1003700 3300003771 Bacteria 9556
27 Ga0055536_1000002 3300003781 Bacteria 605605
28 Ga0055528_1000312 3300003790 Bacteria 41028
29 Ga0055530_10000372 3300003791 Bacteria 40539
30 Ga0055530_10001816 3300003791 Bacteria 14771
31 Ga0055531_10000003 3300003794 Bacteria 274424
32 Ga0058859_10681373 3300004798 Bacteria 7639
33 Ga0058860_12178914 3300004801 Bacteria 9268
34 Ga0065165_1000019 3300005262 Bacteria 271815
35 Ga0065165_1000056 3300005262 Bacteria 186730
36 Ga0065714_10064439 3300005288 Bacteria 112310
37 Ga0065714_10065375 3300005288 Bacteria 10497
38 Ga0065704_10006769 3300005289 Bacteria 2544
39 Ga0065704_10072727 3300005289 Bacteria 8090
40 Ga0065704_10085261 3300005289 Bacteria 3240
41 Ga0065704_10091678 3300005289 Bacteria 2701
42 Ga0065704_10123296 3300005289 Bacteria 1694
43 Ga0070683_100000849 3300005329 Bacteria 22644
44 Ga0070666_10085167 3300005335 Bacteria 2164
45 Ga0070682_100000111 3300005337 Bacteria 72333
46 Ga0070682_100035302 3300005337 Bacteria 3052
47 Ga0070660_100000497 3300005339 Bacteria 26196
48 Ga0070660_100020991 3300005339 Bacteria 4809
49 Ga0070674_100025244 3300005356 Bacteria 3867
50 Ga0070662_100000377 3300005457 Bacteria 26646
51 Ga0070684_100030797 3300005535 Bacteria 4563
52 Ga0070672_100238521 3300005543 Bacteria 1529
53 Ga0070665_100003535 3300005548 Bacteria 16618
54 Ga0068863_100033733 3300005841 Bacteria 4877
55 Ga0097621_100000711 3300006237 Bacteria 23348
56 Ga0068871_100000351 3300006358 Bacteria 31972
57 Ga0068865_100033552 3300006881 Bacteria 3438
58 Ga0105251_10002073 3300009011 Bacteria 16174
59 Ga0105251_10002557 3300009011 Bacteria 14131
60 Ga0105244_10000001 3300009036 Bacteria 1034899
61 Ga0105244_10003221 3300009036 Bacteria 11822
62 Ga0105240_10000173 3300009093 Bacteria 131281
63 Ga0105247_10128751 3300009101 Bacteria 1648
64 Ga0105243_10000016 3300009148 Bacteria 235629
65 Ga0105241_10005396 3300009174 Bacteria 9451
66 Ga0105248_10072609 3300009177 Bacteria 3867
67 Ga0105237_10000972 3300009545 Bacteria 38509
68 Ga0105237_10001614 3300009545 Bacteria 29283
69 Ga0105237_10021919 3300009545 Bacteria 6560
70 Ga0105237_10095996 3300009545 Bacteria 2955
71 Ga0105239_10000255 3300010375 Bacteria 79421
72 Ga0105239_10000415 3300010375 Bacteria 62156
73 Ga0105239_10000775 3300010375 Bacteria 45289
74 Ga0105239_10008462 3300010375 Bacteria 11701
75 Ga0105239_10139712 3300010375 Bacteria 2699
76 Ga0105239_10301578 3300010375 Bacteria 1804
77 Ga0105239_10407519 3300010375 Bacteria 1539
78 Ga0157373_10000083 3300013100 Bacteria 81952
79 Ga0157373_10000280 3300013100 Bacteria 41000
80 Ga0157373_10001045 3300013100 Bacteria 21327
81 Ga0157371_10003213 3300013102 Bacteria 15005
82 Ga0157370_10000552 3300013104 Bacteria 46652
83 Ga0157370_10000637 3300013104 Bacteria 43772
84 Ga0157370_10001430 3300013104 Bacteria 29613
85 Ga0157370_10002050 3300013104 Bacteria 24746
86 Ga0157370_10004794 3300013104 Bacteria 15377
87 Ga0157370_10030543 3300013104 Bacteria 5279
88 Ga0157370_10086112 3300013104 Bacteria 2952
89 Ga0157369_10000594 3300013105 Bacteria 47098
90 Ga0157369_10036175 3300013105 Bacteria 5411
91 Ga0157374_10001038 3300013296 Bacteria 24088
92 Ga0157374_10003039 3300013296 Bacteria 14070
93 Ga0157378_10006428 3300013297 Bacteria 10276
94 Ga0163162_10000123 3300013306 Bacteria 68905
95 Ga0163162_10000833 3300013306 Bacteria 28693
96 Ga0163162_10249470 3300013306 Bacteria 1907
97 Ga0157372_10003136 3300013307 Bacteria 17810
98 Ga0157372_10013078 3300013307 Bacteria 8854
99 Ga0157372_10019750 3300013307 Bacteria 7262
100 Ga0157372_10078828 3300013307 Bacteria 3723
101 Ga0157375_10000073 3300013308 Bacteria 105972
102 Ga0157375_10000220 3300013308 Bacteria 53557
103 Ga0157375_10175907 3300013308 Bacteria 2290
104 Ga0157375_10194817 3300013308 Bacteria 2181
105 Ga0163163_10000129 3300014325 Bacteria 77897
106 Ga0157379_10003405 3300014968 Bacteria 13451
107 Ga0157376_10001988 3300014969 Bacteria 13680
108 Ga0182006_1000003 3300015261 Bacteria 826681
109 Ga0182006_1000859 3300015261 Bacteria 20453
110 Ga0182007_10000024 3300015262 Bacteria 181761
111 Ga0183373_1002 3300015682 Bacteria 990153
112 Ga0163161_10000093 3300017792 Bacteria 90618
113 Ga0163161_10000094 3300017792 Bacteria 90423
114 Ga0163161_10000238 3300017792 Bacteria 50049
115 Ga0163161_10005695 3300017792 Bacteria 8637
116 Ga0163161_10007274 3300017792 Bacteria 7644
117 Ga0163161_10071845 3300017792 Bacteria 2533
118 Ga0213876_10008032 3300021384 Bacteria 5720
119 Ga0213876_10022693 3300021384 Bacteria 3316
120 Ga0209436_100413 3300025208 Bacteria 19243
121 Ga0209436_106618 3300025208 Bacteria 2519
122 Ga0207427_100223 3300025231 Bacteria 48426
123 Ga0209437_100164 3300025233 Bacteria 145317
124 Ga0207425_1000051 3300025245 Bacteria 166795
125 Ga0209646_1000004 3300025246 Bacteria 786587
126 Ga0209026_1000192 3300025250 Bacteria 88221
127 Ga0209129_1000121 3300025258 Bacteria 135404
128 Ga0209233_1000242 3300025261 Bacteria 90301
129 Ga0209673_1000014 3300025273 Bacteria 537082
130 Ga0209673_1010482 3300025273 Bacteria 3905
131 Ga0209130_1004761 3300025284 Bacteria 5015
132 Ga0209675_1000053 3300025291 Bacteria 194511
133 Ga0209676_1000022 3300025292 Bacteria 605659
134 Ga0209025_1000160 3300025294 Bacteria 166795
135 Ga0209564_1001335 3300025295 Bacteria 26264
136 Ga0209758_1000147 3300025297 Bacteria 166795
137 Ga0209758_1001625 3300025297 Bacteria 25604
138 Ga0209758_1003912 3300025297 Bacteria 12996
139 Ga0209758_1012301 3300025297 Bacteria 4804
140 Ga0209050_1000020 3300025298 Bacteria 605671
141 Ga0209050_1000838 3300025298 Bacteria 42361
142 Ga0207426_1000023 3300025302 Bacteria 545465
143 Ga0207426_1000134 3300025302 Bacteria 202226
144 Ga0207426_1000786 3300025302 Bacteria 34729
145 Ga0207426_1000904 3300025302 Bacteria 29822
146 Ga0207426_1000930 3300025302 Bacteria 29211
147 Ga0207426_1003800 3300025302 Bacteria 7836
148 Ga0209257_1000008 3300025304 Bacteria 1294570
149 Ga0209257_1005435 3300025304 Bacteria 8947
150 Ga0207655_1000013 3300025728 Bacteria 637510
151 Ga0207713_1001841 3300025735 Bacteria 16182
152 Ga0207713_1002279 3300025735 Bacteria 14139
153 Ga0207647_10000142 3300025904 Bacteria 57329
154 Ga0207647_10081068 3300025904 Bacteria 1945
155 Ga0207654_10012670 3300025911 Bacteria 4325
156 Ga0207654_10026565 3300025911 Bacteria 3137
157 Ga0207695_10000053 3300025913 Bacteria 396740
158 Ga0207671_10000731 3300025914 Bacteria 41649
159 Ga0207671_10002062 3300025914 Bacteria 21988
160 Ga0207671_10006642 3300025914 Bacteria 10253
161 Ga0207671_10125789 3300025914 Bacteria 1963
162 Ga0207657_10064585 3300025919 Bacteria 3124
163 Ga0207690_10150571 3300025932 Bacteria 1725
164 Ga0207706_10000057 3300025933 Bacteria 112805
165 Ga0207709_10000020 3300025935 Bacteria 392366
166 Ga0207661_10002359 3300025944 Bacteria 13003
167 Ga0207667_10052159 3300025949 Bacteria 4310
168 Ga0207658_10033685 3300025986 Bacteria 3655
169 Ga0207641_10105467 3300026088 Bacteria 2489
170 Ga0207648_10314225 3300026089 Bacteria 1407
171 Ga0207683_10042125 3300026121 Bacteria 3987
172 Ga0268266_10001971 3300028379 Bacteria 23030
173 Ga0265327_10010032 3300031251 Bacteria 6730
174 Ga0316575_10006896 3300031665 Bacteria 4111
175 Ga0316579_10010106 3300031691 Bacteria 3982
176 Ga0316576_10002403 3300031727 Bacteria 10628
177 Ga0316577_10001141 3300031733 Bacteria 12150
178 Ga0307412_10000001 3300031911 Bacteria 822691
179 Ga0307412_10000032 3300031911 Bacteria 207098
180 Ga0307412_10000222 3300031911 Bacteria 38184
181 Ga0307412_10006071 3300031911 Bacteria 6800
182 Ga0307416_100000017 3300032002 Bacteria 201722
183 Ga0307414_10000380 3300032004 Bacteria 24231
184 Ga0307414_10000444 3300032004 Bacteria 21901
185 Ga0316585_10000060 3300032137 Bacteria 17679
186 Ga0316574_0000004 3300035398 Bacteria 49638
187 Ga0316582_0000432 3300036647 Bacteria 15379
188 Ga0316584_0000070 3300036712 Bacteria 40891
189 Ga0395899_0010393 3300037312 Bacteria 7132
190 Ga0395900_0000143 3300037418 Bacteria 120234
191 Ga0395898_0019285 3300037466 Bacteria 6944
192 Ga0395905_0000045 3300037471 Bacteria 241370
193 Ga0395905_0001051 3300037471 Bacteria 34886
194 Ga0395905_0001963 3300037471 Bacteria 23525
195 Ga0395901_0003584 3300038443 Bacteria 15660
196 Ga0395901_0003957 3300038443 Bacteria 14901
197 Ga0436365_0738964 3300039437 Bacteria 22899
198 Ga0436365_1399871 3300039437 Bacteria 18429
199 Ga0439466_0000350 3300041411 Bacteria 17723
200 Ga0439465_0000705 3300041413 Bacteria 10267
201 Ga0439431_0000603 3300041997 Bacteria 7599
202 Ga0439449_0001776 3300042007 Bacteria 8478
203 Ga0451577_0000311 3300042876 Bacteria 93198
204 Ga0453683_0000437 3300044673 Bacteria 47746
205 Ga0453684_0000784 3300044712 Bacteria 109222
206 Ga0453684_0020129 3300044712 Bacteria 10096
207 Ga0453684_0133888 3300044712 Bacteria 2970
208 Ga0451576_0000452 3300045051 Bacteria 93198
209 Ga0495627_001475 3300046453 Bacteria 13666
210 Ga0495627_002985 3300046453 Bacteria 7742
211 Ga0495627_004831 3300046453 Bacteria 5551
212 Ga0495638_0001774 3300046460 Bacteria 18902
213 Ga0495638_0034584 3300046460 Bacteria 3226
214 Ga0495651_0001354 3300046462 Bacteria 18942
215 Ga0495605_0021029 3300046474 Bacteria 3460
216 Ga0495596_0002423 3300046500 Bacteria 10062
217 Ga0495607_0000760 3300046501 Bacteria 30910
218 Ga0495607_0010717 3300046501 Bacteria 6142
219 Ga0495583_0001484 3300046506 Bacteria 23471
220 Ga0495606_0038429 3300046507 Bacteria 3238
221 Ga0495608_0011708 3300046511 Bacteria 6101
222 Ga0495610_0000006 3300046512 Bacteria 856822
223 Ga0495610_0000371 3300046512 Bacteria 46658
224 Ga0495616_0011372 3300046513 Bacteria 5105
225 Ga0495628_0000037 3300046516 Bacteria 109854
226 Ga0495632_0002026 3300046519 Bacteria 15962
227 Ga0495632_0006206 3300046519 Bacteria 7734
228 Ga0495643_0001023 3300046522 Bacteria 28484
229 Ga0495643_0006109 3300046522 Bacteria 8006
230 Ga0495643_0024394 3300046522 Bacteria 3431
231 Ga0495663_0000294 3300046525 Bacteria 18926
232 Ga0495663_0000415 3300046525 Bacteria 15549
233 Ga0495652_0001293 3300046529 Bacteria 27959
234 Ga0495654_0026884 3300046530 Bacteria 2955
235 Ga0495668_0000097 3300046616 Bacteria 139246
236 Ga0495661_0002219 3300046665 Bacteria 15109
237 Ga0495623_0000854 3300046679 Bacteria 20641
238 Ga0495649_0001338 3300046694 Bacteria 18712
239 Ga0495681_0000800 3300047470 Bacteria 24221
240 Ga0495681_0031443 3300047470 Bacteria 2686
241 Ga0495686_0000079 3300047472 Bacteria 202668
242 Ga0495686_0000587 3300047472 Bacteria 51313
243 Ga0495602_0038814 3300048088 Bacteria 4396
244 Ga0496102_0186099 3300048905 Bacteria 1957
245 Ga0496113_0090079 3300048916 Bacteria 2362
246 Ga0496116_0000006 3300048919 Bacteria 811937
247 Ga0496117_0000027 3300048920 Bacteria 412234
248 Ga0496118_0000620 3300048921 Bacteria 58296
249 Ga0496119_0000006 3300048922 Bacteria 505999
250 Ga0496122_0000444 3300048925 Bacteria 86587
251 Ga0496122_0000448 3300048925 Bacteria 86293
252 Ga0496122_0000665 3300048925 Bacteria 69182
253 Ga0496122_0001430 3300048925 Bacteria 38686
254 Ga0496122_0003044 3300048925 Bacteria 22679
255 Ga0496122_0009647 3300048925 Bacteria 10106
256 Ga0496123_0011801 3300048926 Bacteria 7525
257 Ga0496123_0070885 3300048926 Bacteria 2178
258 Ga0496123_0085081 3300048926 Bacteria 1904
259 Ga0496124_0000475 3300048927 Bacteria 69109
260 Ga0496125_0001099 3300048928 Bacteria 41620
261 Ga0496125_0025517 3300048928 Bacteria 5410
262 Ga0496125_0047951 3300048928 Bacteria 3567
263 Ga0496125_0059594 3300048928 Bacteria 3075
264 Ga0496126_0000459 3300048929 Bacteria 81162
265 Ga0496126_0021923 3300048929 Bacteria 6230
266 Ga0495682_0000983 3300049460 Bacteria 17062
267 Ga0501335_000081 3300049551 Bacteria 4211
268 Ga0501070_0055050 3300049586 Bacteria 3298
269 Ga0501241_000018 3300049758 Bacteria 95195
270 Ga0501269_000035 3300049766 Bacteria 41924
271 Ga0501269_003721 3300049766 Bacteria 1839
272 Ga0500635_0010672 3300053080 Bacteria 2589
273 Ga0500635_0015538 3300053080 Bacteria 2250
274 Ga0500646_0004102 3300053090 Bacteria 3699
275 Ga0500651_0000355 3300053093 Bacteria 25690
276 Ga0500569_002313 3300053109 Bacteria 3736
277 Ga0500642_0025320 3300053130 Bacteria 2408
278 Ga0500616_0009265 3300053153 Bacteria 6000
279 Ga0500622_0000123 3300053156 Bacteria 81320
280 Ga0500627_0005996 3300053158 Bacteria 4092

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046665 Ga0495661_0002219 Ga0495661_0002219_8407_9690 396
2 3300025208 Ga0209436_100413 Ga0209436_1004139 397
3 3300025284 Ga0209130_1004761 Ga0209130_10047612 397
4 3300025302 Ga0207426_1000134 Ga0207426_100013456 397
5 3300037471 Ga0395905_0001051 Ga0395905_0001051_3954_5228 398
6 3300044712 Ga0453684_0020129 Ga0453684_0020129_4243_5529 404
7 3300013104 Ga0157370_10086112 Ga0157370_100861122 408
8 3300046474 Ga0495605_0021029 Ga0495605_0021029_1578_2852 408
9 3300046506 Ga0495583_0001484 Ga0495583_0001484_6734_8008 408
10 3300046513 Ga0495616_0011372 Ga0495616_0011372_3267_4511 409
11 iso_pu_bacteria 2895511927 2895513503 410
12 iso_pu_bacteria 646564506 646814775 410
13 3300003794 Ga0055531_10000003 Ga0055531_10000003148 411
14 3300025304 Ga0209257_1000008 Ga0209257_1000008359 411
15 3300049766 Ga0501269_003721 Ga0501269_003721_15_1259 411
16 3300039437 Ga0436365_1399871 Ga0436365_1399871_15953_17203 412
17 3300046501 Ga0495607_0010717 Ga0495607_0010717_4722_5975 412
18 3300035398 Ga0316574_0000004 Ga0316574_0000004_46340_47641 413
19 3300036647 Ga0316582_0000432 Ga0316582_0000432_3593_4894 413
20 3300036712 Ga0316584_0000070 Ga0316584_0000070_1998_3299 413
21 3300003320 rootH2_10042620 rootH2_100426202 415
22 3300053080 Ga0500635_0015538 Ga0500635_0015538_292_1596 415
23 iso_pu_bacteria 2551306352 2552747714 415
24 iso_pu_bacteria 2675903507 2678229525 415
25 iso_pu_bacteria 2773857761 2774391099 415
26 iso_pu_bacteria 2919182534 2919185985 415
27 3300031251 Ga0265327_10010032 Ga0265327_100100326 416
28 iso_pu_bacteria 2916699645 2916700827 416
29 3300004798 Ga0058859_10681373 Ga0058859_106813732 417
30 3300021384 Ga0213876_10008032 Ga0213876_100080324 417
31 3300021384 Ga0213876_10022693 Ga0213876_100226932 417
32 3300039437 Ga0436365_0738964 Ga0436365_0738964_1123_2412 417
33 3300042876 Ga0451577_0000311 Ga0451577_0000311_25857_27164 417
34 3300044673 Ga0453683_0000437 Ga0453683_0000437_44028_45335 417
35 3300044712 Ga0453684_0000784 Ga0453684_0000784_25857_27164 417
36 3300045051 Ga0451576_0000452 Ga0451576_0000452_66035_67342 417
37 iso_pu_bacteria 2585427687 2586209936 417
38 iso_pu_bacteria 2818991437 2819549546 417
39 iso_pu_bacteria 2818991444 2819586794 417
40 3300005335 Ga0070666_10085167 Ga0070666_100851672 418
41 3300005841 Ga0068863_100033733 Ga0068863_1000337332 418
42 3300006237 Ga0097621_100000711 Ga0097621_10000071116 418
43 3300006358 Ga0068871_100000351 Ga0068871_10000035123 418
44 3300006881 Ga0068865_100033552 Ga0068865_1000335522 418
45 3300009177 Ga0105248_10072609 Ga0105248_100726092 418
46 3300013297 Ga0157378_10006428 Ga0157378_1000642811 418
47 3300013306 Ga0163162_10000833 Ga0163162_100008336 418
48 3300013306 Ga0163162_10249470 Ga0163162_102494702 418
49 3300013308 Ga0157375_10000073 Ga0157375_1000007360 418
50 3300014325 Ga0163163_10000129 Ga0163163_1000012970 418
51 3300014968 Ga0157379_10003405 Ga0157379_100034054 418
52 3300014969 Ga0157376_10001988 Ga0157376_100019886 418
53 3300017792 Ga0163161_10005695 Ga0163161_1000569511 418
54 3300017792 Ga0163161_10071845 Ga0163161_100718452 418
55 3300025986 Ga0207658_10033685 Ga0207658_100336853 418
56 3300026088 Ga0207641_10105467 Ga0207641_101054672 418
57 3300026089 Ga0207648_10314225 Ga0207648_103142251 418
58 3300026121 Ga0207683_10042125 Ga0207683_100421252 418
59 3300044712 Ga0453684_0133888 Ga0453684_0133888_1636_2898 418
60 iso_pu_bacteria 2849281842 2849285468 418
61 3300005289 Ga0065704_10006769 Ga0065704_100067692 419
62 3300005289 Ga0065704_10091678 Ga0065704_100916783 419
63 3300005548 Ga0070665_100003535 Ga0070665_1000035354 419
64 3300009011 Ga0105251_10002073 Ga0105251_100020732 419
65 3300009011 Ga0105251_10002557 Ga0105251_100025572 419
66 3300010375 Ga0105239_10407519 Ga0105239_104075192 419
67 3300013104 Ga0157370_10004794 Ga0157370_100047944 419
68 3300013307 Ga0157372_10003136 Ga0157372_1000313616 419
69 3300025735 Ga0207713_1001841 Ga0207713_100184115 419
70 3300025735 Ga0207713_1002279 Ga0207713_100227913 419
71 3300028379 Ga0268266_10001971 Ga0268266_100019718 419
72 3300041411 Ga0439466_0000350 Ga0439466_0000350_4389_5663 419
73 3300046453 Ga0495627_001475 Ga0495627_001475_12351_13625 419
74 3300046453 Ga0495627_002985 Ga0495627_002985_6427_7701 419
75 3300046460 Ga0495638_0001774 Ga0495638_0001774_3956_5230 419
76 3300046501 Ga0495607_0000760 Ga0495607_0000760_24744_26018 419
77 3300046519 Ga0495632_0002026 Ga0495632_0002026_3935_5209 419
78 3300046519 Ga0495632_0006206 Ga0495632_0006206_3951_5225 419
79 3300046522 Ga0495643_0001023 Ga0495643_0001023_23270_24544 419
80 3300046522 Ga0495643_0006109 Ga0495643_0006109_3465_4739 419
81 3300046525 Ga0495663_0000294 Ga0495663_0000294_13803_15077 419
82 3300046525 Ga0495663_0000415 Ga0495663_0000415_12688_13962 419
83 3300046530 Ga0495654_0026884 Ga0495654_0026884_391_1665 419
84 3300046694 Ga0495649_0001338 Ga0495649_0001338_15512_16786 419
85 3300047470 Ga0495681_0000800 Ga0495681_0000800_2927_4201 419
86 3300047470 Ga0495681_0031443 Ga0495681_0031443_133_1407 419
87 3300049460 Ga0495682_0000983 Ga0495682_0000983_3489_4763 419
88 iso_pu_bacteria 2643221667 2644373972 419
89 iso_pu_bacteria 2896317667 2896318911 419
90 3300005337 Ga0070682_100035302 Ga0070682_1000353023 420
91 3300005339 Ga0070660_100000497 Ga0070660_10000049719 420
92 3300005339 Ga0070660_100020991 Ga0070660_1000209912 420
93 3300009036 Ga0105244_10003221 Ga0105244_100032218 420
94 3300017792 Ga0163161_10007274 Ga0163161_100072742 420
95 3300025291 Ga0209675_1000053 Ga0209675_1000053102 420
96 3300025919 Ga0207657_10064585 Ga0207657_100645852 420
97 3300046460 Ga0495638_0034584 Ga0495638_0034584_1392_2672 420
98 3300046462 Ga0495651_0001354 Ga0495651_0001354_11748_13025 420
99 3300046511 Ga0495608_0011708 Ga0495608_0011708_1131_2408 420
100 3300046516 Ga0495628_0000037 Ga0495628_0000037_85666_86943 420
101 3300046529 Ga0495652_0001293 Ga0495652_0001293_19922_21199 420
102 3300046679 Ga0495623_0000854 Ga0495623_0000854_6803_8080 420
103 3300047472 Ga0495686_0000587 Ga0495686_0000587_7219_8487 420
104 3300048088 Ga0495602_0038814 Ga0495602_0038814_588_1865 420
105 3300048905 Ga0496102_0186099 Ga0496102_0186099_551_1846 420
106 3300048916 Ga0496113_0090079 Ga0496113_0090079_971_2266 420
107 3300048919 Ga0496116_0000006 Ga0496116_0000006_131086_132381 420
108 3300048920 Ga0496117_0000027 Ga0496117_0000027_222805_224100 420
109 3300048921 Ga0496118_0000620 Ga0496118_0000620_13732_15027 420
110 3300048922 Ga0496119_0000006 Ga0496119_0000006_365994_367289 420
111 3300048925 Ga0496122_0000444 Ga0496122_0000444_39692_40987 420
112 3300048925 Ga0496122_0001430 Ga0496122_0001430_36640_37935 420
113 3300048926 Ga0496123_0011801 Ga0496123_0011801_5182_6477 420
114 3300048927 Ga0496124_0000475 Ga0496124_0000475_32340_33635 420
115 3300048928 Ga0496125_0001099 Ga0496125_0001099_36635_37930 420
116 3300048928 Ga0496125_0025517 Ga0496125_0025517_1776_3071 420
117 iso_pu_bacteria 2738541273 2738701275 420
118 iso_pu_bacteria 2738543014 2739255573 420
119 iso_pu_bacteria 2840677318 2840678420 420
120 iso_pu_bacteria 2857627736 2857632425 420
121 iso_pu_bacteria 2896085136 2896086237 420
122 iso_pu_bacteria 2904445276 2904447314 420
123 iso_pu_bacteria 8036736890 8036737855 420
124 3300005288 Ga0065714_10064439 Ga0065714_1006443911 421
125 3300013102 Ga0157371_10003213 Ga0157371_100032133 421
126 3300017792 Ga0163161_10000094 Ga0163161_1000009436 421
127 3300031665 Ga0316575_10006896 Ga0316575_100068963 421
128 3300031691 Ga0316579_10010106 Ga0316579_100101064 421
129 3300031727 Ga0316576_10002403 Ga0316576_100024035 421
130 3300031733 Ga0316577_10001141 Ga0316577_100011417 421
131 3300032137 Ga0316585_10000060 Ga0316585_100000606 421
132 3300013100 Ga0157373_10001045 Ga0157373_1000104517 422
133 3300013104 Ga0157370_10000637 Ga0157370_1000063732 422
134 3300013104 Ga0157370_10001430 Ga0157370_1000143025 422
135 3300013105 Ga0157369_10000594 Ga0157369_1000059412 422
136 3300013308 Ga0157375_10194817 Ga0157375_101948172 422
137 3300015262 Ga0182007_10000024 Ga0182007_1000002429 422
138 3300017792 Ga0163161_10000093 Ga0163161_1000009331 422
139 3300017792 Ga0163161_10000238 Ga0163161_1000023840 422
140 3300046512 Ga0495610_0000371 Ga0495610_0000371_39284_40561 422
141 3300053158 Ga0500627_0005996 Ga0500627_0005996_1110_2384 422
142 iso_pu_bacteria 2585428045 2587678724 422
143 iso_pu_bacteria 2588254255 2590601476 422
144 iso_pu_bacteria 2728369107 2729199987 422
145 iso_pu_bacteria 2751185877 2753673059 422
146 iso_pu_bacteria 2929921140 2929922165 422
147 iso_pu_bacteria 2993372514 2993374609 422
148 iso_pu_bacteria 2993480792 2993481490 422
149 3300013104 Ga0157370_10002050 Ga0157370_1000205013 423
150 3300015261 Ga0182006_1000859 Ga0182006_10008596 423
151 3300031911 Ga0307412_10000001 Ga0307412_10000001158 423
152 3300046616 Ga0495668_0000097 Ga0495668_0000097_101910_103190 423
153 3300048925 Ga0496122_0003044 Ga0496122_0003044_13889_15166 423
154 3300048926 Ga0496123_0085081 Ga0496123_0085081_387_1664 423
155 3300048928 Ga0496125_0047951 Ga0496125_0047951_2214_3491 423
156 3300053130 Ga0500642_0025320 Ga0500642_0025320_1089_2369 423
157 iso_pu_bacteria 2582581278 2585142889 423
158 iso_pu_bacteria 2585428060 2587746082 423
159 iso_pu_bacteria 2585428182 2588210244 423
160 iso_pu_bacteria 2585428183 2588214529 423
161 iso_pu_bacteria 2585428184 2588217760 423
162 iso_pu_bacteria 2585428185 2588223026 423
163 iso_pu_bacteria 2588253712 2588444157 423
164 iso_pu_bacteria 2588254257 2590613922 423
165 iso_pu_bacteria 2738541284 2738763236 423
166 iso_pu_bacteria 2765235839 2765574148 423
167 iso_pu_bacteria 2775506739 2775671991 423
168 iso_pu_bacteria 2816332188 2816874365 423
169 iso_pu_bacteria 2821136567 2821138408 423
170 iso_pu_bacteria 2871720351 2871724044 423
171 iso_pu_bacteria 2884791551 2884794434 423
172 iso_pu_bacteria 2889290771 2889295331 423
173 iso_pu_bacteria 2904467357 2904469204 423
174 iso_pu_bacteria 2919097161 2919098571 423
175 3300002774 JGI25150J39212_1000023 JGI25150J39212_10000232 424
176 3300003187 JGI25151J46595_10000082 JGI25151J46595_100000822 424
177 3300003215 JGI25153J46596_10000060 JGI25153J46596_100000603 424
178 3300003781 Ga0055536_1000002 Ga0055536_1000002512 424
179 3300003791 Ga0055530_10001816 Ga0055530_100018163 424
180 3300013104 Ga0157370_10030543 Ga0157370_100305432 424
181 3300015682 Ga0183373_1002 Ga0183373_100227 424
182 3300025245 Ga0207425_1000051 Ga0207425_100005136 424
183 3300025258 Ga0209129_1000121 Ga0209129_10001213 424
184 3300025292 Ga0209676_1000022 Ga0209676_100002227 424
185 3300025294 Ga0209025_1000160 Ga0209025_1000160123 424
186 3300025297 Ga0209758_1000147 Ga0209758_1000147123 424
187 3300025298 Ga0209050_1000020 Ga0209050_1000020514 424
188 iso_pu_bacteria 2721755487 2722725715 424
189 iso_pu_bacteria 2904780799 2904782478 424
190 iso_pu_bacteria 2919177583 2919178356 424
191 3300003215 JGI25153J46596_10024305 JGI25153J46596_100243052 425
192 3300003354 JGI25160J50197_1002210 JGI25160J50197_10022105 425
193 3300003790 Ga0055528_1000312 Ga0055528_10003129 425
194 3300003791 Ga0055530_10000372 Ga0055530_100003729 425
195 3300005262 Ga0065165_1000056 Ga0065165_100005697 425
196 3300025273 Ga0209673_1000014 Ga0209673_100001441 425
197 3300025297 Ga0209758_1012301 Ga0209758_10123012 425
198 3300025298 Ga0209050_1000838 Ga0209050_100083827 425
199 3300025302 Ga0207426_1000786 Ga0207426_100078613 425
200 3300025304 Ga0209257_1005435 Ga0209257_10054357 425
201 3300041997 Ga0439431_0000603 Ga0439431_0000603_3026_4315 425
202 iso_pu_bacteria 2905999023 2905999972 425
203 iso_pu_bacteria 2919399522 2919403886 425
204 3300001989 JGI24739J22299_10008864 JGI24739J22299_100088642 426
205 3300002738 JGI25154J39366_1000003 JGI25154J39366_1000003172 426
206 3300002741 JGI25157J39369_1002794 JGI25157J39369_10027943 426
207 3300003320 rootH2_10040683 rootH2_1004068311 426
208 3300003354 JGI25160J50197_1009966 JGI25160J50197_10099662 426
209 3300003771 Ga0055526_1003700 Ga0055526_10037002 426
210 3300004801 Ga0058860_12178914 Ga0058860_121789144 426
211 3300005262 Ga0065165_1000019 Ga0065165_100001932 426
212 3300005288 Ga0065714_10065375 Ga0065714_100653756 426
213 3300005289 Ga0065704_10072727 Ga0065704_100727275 426
214 3300005329 Ga0070683_100000849 Ga0070683_10000084912 426
215 3300005356 Ga0070674_100025244 Ga0070674_1000252442 426
216 3300005535 Ga0070684_100030797 Ga0070684_1000307972 426
217 3300010375 Ga0105239_10000415 Ga0105239_1000041528 426
218 3300010375 Ga0105239_10008462 Ga0105239_100084624 426
219 3300010375 Ga0105239_10301578 Ga0105239_103015782 426
220 3300015261 Ga0182006_1000003 Ga0182006_1000003256 426
221 3300025246 Ga0209646_1000004 Ga0209646_1000004167 426
222 3300025250 Ga0209026_1000192 Ga0209026_100019264 426
223 3300025273 Ga0209673_1010482 Ga0209673_10104823 426
224 3300025295 Ga0209564_1001335 Ga0209564_100133517 426
225 3300025297 Ga0209758_1001625 Ga0209758_10016252 426
226 3300025297 Ga0209758_1003912 Ga0209758_10039122 426
227 3300025302 Ga0207426_1000904 Ga0207426_10009042 426
228 3300025302 Ga0207426_1000930 Ga0207426_100093012 426
229 3300025302 Ga0207426_1003800 Ga0207426_10038002 426
230 3300025944 Ga0207661_10002359 Ga0207661_100023596 426
231 3300032004 Ga0307414_10000380 Ga0307414_100003804 426
232 3300042007 Ga0439449_0001776 Ga0439449_0001776_1476_2762 426
233 3300046500 Ga0495596_0002423 Ga0495596_0002423_278_1570 426
234 3300048925 Ga0496122_0000448 Ga0496122_0000448_49598_50890 426
235 3300048925 Ga0496122_0000665 Ga0496122_0000665_36468_37760 426
236 3300048926 Ga0496123_0070885 Ga0496123_0070885_594_1886 426
237 3300049551 Ga0501335_000081 Ga0501335_000081_2725_4017 426
238 3300049758 Ga0501241_000018 Ga0501241_000018_11410_12702 426
239 3300049766 Ga0501269_000035 Ga0501269_000035_31064_32356 426
240 3300053090 Ga0500646_0004102 Ga0500646_0004102_2166_3455 426
241 3300053109 Ga0500569_002313 Ga0500569_002313_1103_2392 426
242 3300053153 Ga0500616_0009265 Ga0500616_0009265_3529_4818 426
243 3300053156 Ga0500622_0000123 Ga0500622_0000123_40818_42176 426
244 3300003320 rootH2_10028284 rootH2_100282844 427
245 3300003323 rootH1_10028670 rootH1_100286705 427
246 3300003323 rootH1_10070863 rootH1_100708633 427
247 3300003354 JGI25160J50197_1001506 JGI25160J50197_10015062 427
248 3300003578 Ga0006562J51391_1029364 Ga0006562J51391_10293642 427
249 3300005337 Ga0070682_100000111 Ga0070682_1000001114 427
250 3300005457 Ga0070662_100000377 Ga0070662_1000003778 427
251 3300005543 Ga0070672_100238521 Ga0070672_1002385211 427
252 3300009036 Ga0105244_10000001 Ga0105244_10000001333 427
253 3300009101 Ga0105247_10128751 Ga0105247_101287511 427
254 3300009174 Ga0105241_10005396 Ga0105241_100053967 427
255 3300009545 Ga0105237_10001614 Ga0105237_1000161419 427
256 3300010375 Ga0105239_10000255 Ga0105239_1000025521 427
257 3300010375 Ga0105239_10139712 Ga0105239_101397122 427
258 3300013104 Ga0157370_10000552 Ga0157370_1000055223 427
259 3300013105 Ga0157369_10036175 Ga0157369_100361753 427
260 3300013296 Ga0157374_10001038 Ga0157374_100010389 427
261 3300013306 Ga0163162_10000123 Ga0163162_1000012329 427
262 3300013307 Ga0157372_10013078 Ga0157372_100130787 427
263 3300013307 Ga0157372_10078828 Ga0157372_100788282 427
264 3300025302 Ga0207426_1000023 Ga0207426_100002370 427
265 3300025728 Ga0207655_1000013 Ga0207655_1000013459 427
266 3300025904 Ga0207647_10000142 Ga0207647_100001427 427
267 3300025911 Ga0207654_10026565 Ga0207654_100265652 427
268 3300025914 Ga0207671_10006642 Ga0207671_100066423 427
269 3300025932 Ga0207690_10150571 Ga0207690_101505711 427
270 3300025933 Ga0207706_10000057 Ga0207706_1000005724 427
271 3300025949 Ga0207667_10052159 Ga0207667_100521592 427
272 3300031911 Ga0307412_10000222 Ga0307412_1000022212 427
273 3300031911 Ga0307412_10006071 Ga0307412_100060716 427
274 3300037312 Ga0395899_0010393 Ga0395899_0010393_160_1518 427
275 3300037418 Ga0395900_0000143 Ga0395900_0000143_90225_91559 427
276 3300037466 Ga0395898_0019285 Ga0395898_0019285_1837_3171 427
277 3300037471 Ga0395905_0000045 Ga0395905_0000045_179353_180687 427
278 3300037471 Ga0395905_0001963 Ga0395905_0001963_18138_19466 427
279 3300038443 Ga0395901_0003584 Ga0395901_0003584_11790_13118 427
280 3300038443 Ga0395901_0003957 Ga0395901_0003957_13210_14544 427
281 3300041413 Ga0439465_0000705 Ga0439465_0000705_3924_5219 427
282 3300046507 Ga0495606_0038429 Ga0495606_0038429_587_1915 427
283 3300046512 Ga0495610_0000006 Ga0495610_0000006_605344_606639 427
284 3300048929 Ga0496126_0000459 Ga0496126_0000459_48788_50083 427
285 3300003320 rootH2_10008573 rootH2_100085734 428
286 3300005289 Ga0065704_10123296 Ga0065704_101232961 428
287 3300009093 Ga0105240_10000173 Ga0105240_1000017331 428
288 3300009148 Ga0105243_10000016 Ga0105243_1000001626 428
289 3300009545 Ga0105237_10000972 Ga0105237_100009723 428
290 3300009545 Ga0105237_10095996 Ga0105237_100959962 428
291 3300010375 Ga0105239_10000775 Ga0105239_1000077531 428
292 3300013100 Ga0157373_10000083 Ga0157373_1000008318 428
293 3300013100 Ga0157373_10000280 Ga0157373_1000028026 428
294 3300013307 Ga0157372_10019750 Ga0157372_100197506 428
295 3300025208 Ga0209436_106618 Ga0209436_1066182 428
296 3300025904 Ga0207647_10081068 Ga0207647_100810682 428
297 3300025911 Ga0207654_10012670 Ga0207654_100126703 428
298 3300025913 Ga0207695_10000053 Ga0207695_10000053125 428
299 3300025914 Ga0207671_10000731 Ga0207671_100007313 428
300 3300025914 Ga0207671_10125789 Ga0207671_101257892 428
301 3300025935 Ga0207709_10000020 Ga0207709_10000020169 428
302 3300049586 Ga0501070_0055050 Ga0501070_0055050_53_1348 428
303 3300053080 Ga0500635_0010672 Ga0500635_0010672_1233_2534 428
304 iso_pu_bacteria 2818991460 2819679876 428
305 iso_pu_bacteria 3003233435 3003235775 428
306 2162886007 SwRhRL2b_contig_1137231 SwRhRL2b_0494.00003080 429
307 3300002737 JGI25162J39368_1000204 JGI25162J39368_100020429 429
308 3300002772 JGI25164J39214_1000712 JGI25164J39214_10007129 429
309 3300003214 JGI25165J46597_1001221 JGI25165J46597_10012216 429
310 3300003316 rootH1_10107018 rootH1_101070182 429
311 3300003320 rootH2_10028634 rootH2_100286342 429
312 3300003323 rootH1_10014058 rootH1_1001405821 429
313 3300005289 Ga0065704_10085261 Ga0065704_100852612 429
314 3300009545 Ga0105237_10021919 Ga0105237_100219195 429
315 3300013296 Ga0157374_10003039 Ga0157374_100030395 429
316 3300013308 Ga0157375_10000220 Ga0157375_1000022019 429
317 3300013308 Ga0157375_10175907 Ga0157375_101759072 429
318 3300025231 Ga0207427_100223 Ga0207427_1002238 429
319 3300025233 Ga0209437_100164 Ga0209437_10016452 429
320 3300025261 Ga0209233_1000242 Ga0209233_100024228 429
321 3300025914 Ga0207671_10002062 Ga0207671_1000206216 429
322 3300031911 Ga0307412_10000032 Ga0307412_1000003274 429
323 3300032002 Ga0307416_100000017 Ga0307416_100000017149 429
324 3300032004 Ga0307414_10000444 Ga0307414_1000044417 429
325 3300046453 Ga0495627_004831 Ga0495627_004831_2901_4202 429
326 3300046522 Ga0495643_0024394 Ga0495643_0024394_1869_3170 429
327 3300047472 Ga0495686_0000079 Ga0495686_0000079_93015_94316 429
328 3300048925 Ga0496122_0009647 Ga0496122_0009647_2436_3737 429
329 3300048928 Ga0496125_0059594 Ga0496125_0059594_238_1602 429
330 3300048929 Ga0496126_0021923 Ga0496126_0021923_3199_4527 429
331 3300053093 Ga0500651_0000355 Ga0500651_0000355_6788_8086 429

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

203

293

0.97

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

319

470

0.95

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

1

190

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f7v-assembly1.cif.gz_A crystal structure of lkce e64q mutant in complex with lc-ka05 0.9447 6 37
6f32-assembly1.cif.gz_A crystal structure of a dual function amine oxidase/cyclase in complex with substrate analogues 0.9333 6 38
6f7l-assembly1.cif.gz_A crystal structure of lkce r326q mutant in complex with its substrate 0.9291 6 38
6f7l-assembly1.cif.gz_B crystal structure of lkce r326q mutant in complex with its substrate 0.9266 6 38
6fjh-assembly1.cif.gz_B crystal structure of the seleniated lkce from streptomyces rochei 0.9225 6 38
ID Description Score Start End Superfamily
af_O53734_9_416_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9544 10 38 3.50.50.60
af_A0A1D8PDW7_22_394_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.943 9 38 3.50.50.60
af_Q58883_2_383_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9261 8 38 3.50.50.60
5ttkA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9071 8 38 3.50.50.60
4wb1A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8908 243 417 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6M1Q1K2-F1-model_v4 deleted 0.9834 6 230
AF-A0A7Y4NNS8-F1-model_v4 deleted 0.9832 194 320
AF-A0A2T4DXU0-F1-model_v4 deleted 0.9825 7 237
AF-J0V5N0-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase 0.9799 5 139 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-A0A661HFG7-F1-model_v4 Vi polysaccharide biosynthesis protein VipA/TviB 0.9791 6 225 GO:0000271
GO:0016616
GO:0016628
GO:0051287

Feature Viewer

pLDDT pTM Quality
92.38 0.89 High
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Predicted Structure (AlphaFold2)

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