F409879

General Info

Members Datasets Scaffolds Average Seq Length
329 184 318 635

Family's Representative Sequence

Representative Sequence 3300053095|Ga0500640_002460|Ga0500640_002460_1412_3538
Length 708
Sequence MTMARRAGAADCAARAGSPADRGKGTDGRNSHCACRQLCVSAWSNMARAKALIAHDPLRRWTATDANDLYNIPRWGCGYFGVNDQGNLIVTPRQPSATDAAPQVTPNVVQLGGQPGEIDMKELIDELVARGIQLPILLRFSDILRARIELLCGAFNGAIREYGYGGQYRGVYPIKVNQNRTVVEEIIEYGRPFHYGLEAGSKPELLAIMAIHQDDESLIICNGYKDEEYIETALLASKMGKTVILVVEKPTELDNIHRVSERVKIKPSLGFRARLSSRGAGRWEQSGGDFSKFGLSAAEMVEAVQKLKTWGDVDVLKLLHFHLGSQISAIKSVKNALREAGRLFVEMYKMGAKGLSYLDVGGGLGVDYDGSQTNFASSMNYTVQEYANDVVYAIKEICDADQVPHPNIVSESGRALTAHHSVLVVNVLGVTEFNTHVPAQLERPAPPLVTNMWETYQSVGAKNTLEAYHDALEYKDQVLQLFNLGHLSLEHRVLCENLFWAICEKVLMLVRNRDHVPEELEGLEKALSDTYFCNFSMFQSVPDAWAVDQLFPICPIHRLNEEPTRRATLADITCDSDGKIDSFIDLRDVKHVLELHPKTEGHDYYLGIFLVGAYQEILGDLHNLFGDTNTVHVQLSPEGDYDVKEVVAGDTVSEVLAFVDYSPSDLLGRLRNSAEQALRKKLMTIEESRTLINRFRQGMIGYTYLDRE

Samples

Sample ID Description Type Environment
1 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
2 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
3 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
4 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
5 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
6 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
7 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
8 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
9 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
10 2952252522 Salinicola sp. DM10 Isolate Unclassified
11 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
99 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
104 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
110 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
115 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
116 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
117 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
118 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
119 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
120 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
121 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
122 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
123 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
126 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
132 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
135 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
136 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
137 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
142 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
143 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
144 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
145 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
146 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
179 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
180 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
181 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
182 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
183 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
184 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.35
Metatranscriptomes 0.3
Isolates 3.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.13
Nodule 0
Rhizoplane 2.13
Rhizosphere 87.54
Stem 0
Stem Tuber 0
Unclassified 8.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10000036 3300003911 Bacteria 14396
2 Ga0058860_12022602 3300004801 Bacteria 2384
3 Ga0070690_100011692 3300005330 Bacteria 5142
4 Ga0070690_100051317 3300005330 Bacteria 2633
5 Ga0070670_100000018 3300005331 Bacteria 221691
6 Ga0070670_100016868 3300005331 Bacteria 6269
7 Ga0070670_100042798 3300005331 Bacteria 3894
8 Ga0070682_100005252 3300005337 Bacteria 7207
9 Ga0070689_100006409 3300005340 Bacteria 8142
10 Ga0070689_100081946 3300005340 Bacteria 2533
11 Ga0070661_100033486 3300005344 Bacteria 3722
12 Ga0070669_100000954 3300005353 Bacteria 21107
13 Ga0070675_100058940 3300005354 Bacteria 3167
14 Ga0070671_100000084 3300005355 Bacteria 59737
15 Ga0070671_100034835 3300005355 Bacteria 4169
16 Ga0070671_100051733 3300005355 Bacteria 3416
17 Ga0070688_100000916 3300005365 Bacteria 14728
18 Ga0070688_100041580 3300005365 Bacteria 2823
19 Ga0070667_100000002 3300005367 Bacteria 504831
20 Ga0070667_100026040 3300005367 Bacteria 4863
21 Ga0070667_100051517 3300005367 Bacteria 3471
22 Ga0070700_100053238 3300005441 Bacteria 2525
23 Ga0070685_10000009 3300005466 Bacteria 166260
24 Ga0070706_100014398 3300005467 Bacteria 7309
25 Ga0070706_100086324 3300005467 Bacteria 2908
26 Ga0070698_100000424 3300005471 Bacteria 45082
27 Ga0070698_100006335 3300005471 Bacteria 12851
28 Ga0070684_100014891 3300005535 Bacteria 6312
29 Ga0070697_100020069 3300005536 Bacteria 5282
30 Ga0070696_100053417 3300005546 Bacteria 2813
31 Ga0070665_100005696 3300005548 Bacteria 12796
32 Ga0070665_100029894 3300005548 Bacteria 5483
33 Ga0068855_100024188 3300005563 Bacteria 7272
34 Ga0068855_100041854 3300005563 Bacteria 5430
35 Ga0070664_100026996 3300005564 Bacteria 4769
36 Ga0068856_100006602 3300005614 Bacteria 11370
37 Ga0068859_100005849 3300005617 Bacteria 12488
38 Ga0068859_100039328 3300005617 Bacteria 4744
39 Ga0068859_100062418 3300005617 Bacteria 3756
40 Ga0068859_100077939 3300005617 Bacteria 3355
41 Ga0068864_100000002 3300005618 Bacteria 658857
42 Ga0068861_100021445 3300005719 Bacteria 4642
43 Ga0068863_100024372 3300005841 Bacteria 5770
44 Ga0068858_100060681 3300005842 Bacteria 3495
45 Ga0068860_100000499 3300005843 Bacteria 48692
46 Ga0068860_100037912 3300005843 Bacteria 4613
47 Ga0081455_10000195 3300005937 Bacteria 77088
48 Ga0081538_10025731 3300005981 Bacteria 4139
49 Ga0081540_1011379 3300005983 Bacteria 5949
50 Ga0070717_10009428 3300006028 Bacteria 7336
51 Ga0070717_10026055 3300006028 Bacteria 4660
52 Ga0068871_100010752 3300006358 Bacteria 6694
53 Ga0075428_100000078 3300006844 Bacteria 80448
54 Ga0075428_100013811 3300006844 Bacteria 8993
55 Ga0075428_100130237 3300006844 Bacteria 2737
56 Ga0075430_100012985 3300006846 Bacteria 7100
57 Ga0075430_100060750 3300006846 Bacteria 3176
58 Ga0075431_100029057 3300006847 Bacteria 5688
59 Ga0075431_100029429 3300006847 Bacteria 5654
60 Ga0075431_100059607 3300006847 Bacteria 3939
61 Ga0075429_100011059 3300006880 Bacteria 7810
62 Ga0075429_100049178 3300006880 Bacteria 3666
63 Ga0097620_100005850 3300006931 Bacteria 12488
64 Ga0097620_100039327 3300006931 Bacteria 4744
65 Ga0097620_100062423 3300006931 Bacteria 3756
66 Ga0097620_100077941 3300006931 Bacteria 3355
67 Ga0099795_10000013 3300007788 Bacteria 69893
68 Ga0105240_10003504 3300009093 Bacteria 24341
69 Ga0111539_10004462 3300009094 Bacteria 18298
70 Ga0111539_10006836 3300009094 Bacteria 14657
71 Ga0111539_10007762 3300009094 Bacteria 13700
72 Ga0111539_10009278 3300009094 Bacteria 12426
73 Ga0105245_10011177 3300009098 Bacteria 7813
74 Ga0105245_10046700 3300009098 Bacteria 3870
75 Ga0105247_10025818 3300009101 Bacteria 3545
76 Ga0105242_10022793 3300009176 Bacteria 4930
77 Ga0105248_10016746 3300009177 Bacteria 8071
78 Ga0105237_10003261 3300009545 Bacteria 19399
79 Ga0099796_10000090 3300010159 Bacteria 15078
80 Ga0105239_10008250 3300010375 Bacteria 11879
81 Ga0105246_10020033 3300011119 Bacteria 4288
82 Ga0157371_10012221 3300013102 Bacteria 6574
83 Ga0157374_10019621 3300013296 Bacteria 5986
84 Ga0157374_10054704 3300013296 Bacteria 3724
85 Ga0157378_10038562 3300013297 Bacteria 4235
86 Ga0163162_10018941 3300013306 Bacteria 6750
87 Ga0157372_10022545 3300013307 Bacteria 6815
88 Ga0157375_10007756 3300013308 Bacteria 9389
89 Ga0163163_10000627 3300014325 Bacteria 30451
90 Ga0163163_10017618 3300014325 Bacteria 6667
91 Ga0163163_10025748 3300014325 Bacteria 5611
92 Ga0163163_10050527 3300014325 Bacteria 4094
93 Ga0157379_10000046 3300014968 Bacteria 75092
94 Ga0157379_10024724 3300014968 Bacteria 5331
95 Ga0213876_10015616 3300021384 Bacteria 4019
96 Ga0213876_10045248 3300021384 Bacteria 2328
97 Ga0213875_10011276 3300021388 Bacteria 4452
98 Ga0209258_100391 3300025242 Bacteria 55848
99 Ga0207684_10001946 3300025910 Bacteria 21394
100 Ga0207695_10014819 3300025913 Bacteria 9209
101 Ga0207662_10039088 3300025918 Bacteria 2782
102 Ga0207681_10000509 3300025923 Bacteria 27059
103 Ga0207650_10000002 3300025925 Bacteria 1439222
104 Ga0207650_10010832 3300025925 Bacteria 6265
105 Ga0207644_10042897 3300025931 Bacteria 3208
106 Ga0207670_10038695 3300025936 Bacteria 3117
107 Ga0207670_10050527 3300025936 Bacteria 2787
108 Ga0207711_10007991 3300025941 Bacteria 8851
109 Ga0207711_10021131 3300025941 Bacteria 5436
110 Ga0207667_10036487 3300025949 Bacteria 5269
111 Ga0207658_10000001 3300025986 Bacteria 1439333
112 Ga0207703_10114953 3300026035 Bacteria 2302
113 Ga0207708_10079392 3300026075 Bacteria 2520
114 Ga0207702_10013778 3300026078 Bacteria 6715
115 Ga0207641_10009154 3300026088 Bacteria 8176
116 Ga0207641_10022739 3300026088 Bacteria 5161
117 Ga0207641_10044795 3300026088 Bacteria 3721
118 Ga0207676_10000001 3300026095 Bacteria 1439222
119 Ga0207675_100041171 3300026118 Bacteria 4314
120 Ga0209179_1000007 3300027512 Bacteria 93732
121 Ga0207428_10009007 3300027907 Bacteria 8986
122 Ga0268266_10000993 3300028379 Bacteria 35782
123 Ga0268266_10068168 3300028379 Bacteria 3080
124 Ga0268265_10000455 3300028380 Bacteria 43315
125 Ga0268264_10000004 3300028381 Bacteria 1116842
126 Ga0268264_10029452 3300028381 Bacteria 4496
127 Ga0268264_10033580 3300028381 Bacteria 4217
128 Ga0268264_10119364 3300028381 Bacteria 2322
129 Ga0265334_10019692 3300028573 Bacteria 2773
130 Ga0265323_10000281 3300028653 Bacteria 29505
131 Ga0307517_10031436 3300028786 Bacteria 6178
132 Ga0307515_10062973 3300028794 Bacteria 5224
133 Ga0265338_10017322 3300028800 Bacteria 7775
134 Ga0265324_10000051 3300029957 Bacteria 99063
135 Ga0265332_10003964 3300031238 Bacteria 7057
136 Ga0265327_10000229 3300031251 Bacteria 113907
137 Ga0265316_10000823 3300031344 Bacteria 34334
138 Ga0265316_10003180 3300031344 Bacteria 16707
139 Ga0265316_10072500 3300031344 Bacteria 2653
140 Ga0307509_10002621 3300031507 Bacteria 28788
141 Ga0307509_10004505 3300031507 Bacteria 20029
142 Ga0307509_10137589 3300031507 Bacteria 2385
143 Ga0316575_10011026 3300031665 Bacteria 3335
144 Ga0316579_10000335 3300031691 Bacteria 14709
145 Ga0316579_10000880 3300031691 Bacteria 10413
146 Ga0316579_10001031 3300031691 Bacteria 9816
147 Ga0316579_10001951 3300031691 Bacteria 7692
148 Ga0316579_10032449 3300031691 Bacteria 2395
149 Ga0316579_10048334 3300031691 Bacteria 1987
150 Ga0316576_10006773 3300031727 Bacteria 7161
151 Ga0316576_10009016 3300031727 Bacteria 6413
152 Ga0316576_10009794 3300031727 Bacteria 6203
153 Ga0316576_10012433 3300031727 Bacteria 5621
154 Ga0316576_10016522 3300031727 Bacteria 4987
155 Ga0316578_10001260 3300031728 Bacteria 10108
156 Ga0316578_10003566 3300031728 Bacteria 7151
157 Ga0316578_10005051 3300031728 Bacteria 6340
158 Ga0316578_10027362 3300031728 Bacteria 3222
159 Ga0316578_10032004 3300031728 Bacteria 3001
160 Ga0316578_10053810 3300031728 Bacteria 2359
161 Ga0307516_10044168 3300031730 Bacteria 4411
162 Ga0307405_10019054 3300031731 Bacteria 3802
163 Ga0316577_10002190 3300031733 Bacteria 9598
164 Ga0316577_10002546 3300031733 Bacteria 9059
165 Ga0316577_10002906 3300031733 Bacteria 8564
166 Ga0316577_10024528 3300031733 Bacteria 3353
167 Ga0307410_10037694 3300031852 Bacteria 3160
168 Ga0307406_10007327 3300031901 Bacteria 6114
169 Ga0307407_10017426 3300031903 Bacteria 3604
170 Ga0307411_10002146 3300032005 Bacteria 8553
171 Ga0316583_10001046 3300032133 Bacteria 8967
172 Ga0316580_10001642 3300032139 Bacteria 5926
173 Ga0316580_10014426 3300032139 Bacteria 2413
174 Ga0307507_10046148 3300033179 Bacteria 4275
175 Ga0373936_0000004 3300035113 Bacteria 351159
176 Ga0373943_0026054 3300035170 Bacteria 2737
177 Ga0373961_0000018 3300035241 Bacteria 101570
178 Ga0316574_0002136 3300035398 Bacteria 9802
179 Ga0316574_0011278 3300035398 Bacteria 5076
180 Ga0316574_0014442 3300035398 Bacteria 4565
181 Ga0316574_0060239 3300035398 Bacteria 2382
182 Ga0373935_0071040 3300035692 Bacteria 2245
183 Ga0373927_0012679 3300035695 Bacteria 5607
184 Ga0373933_0032710 3300035724 Bacteria 3024
185 Ga0373937_0007362 3300036401 Bacteria 9529
186 Ga0373937_0039595 3300036401 Bacteria 4295
187 Ga0316582_0004433 3300036647 Bacteria 7097
188 Ga0316582_0014365 3300036647 Bacteria 4491
189 Ga0316582_0020956 3300036647 Bacteria 3852
190 Ga0316582_0037385 3300036647 Bacteria 3009
191 Ga0316584_0000057 3300036712 Bacteria 42823
192 Ga0316584_0000157 3300036712 Bacteria 31433
193 Ga0316584_0001688 3300036712 Bacteria 13512
194 Ga0316584_0003396 3300036712 Bacteria 10329
195 Ga0316584_0007300 3300036712 Bacteria 7547
196 Ga0316584_0014529 3300036712 Bacteria 5607
197 Ga0316584_0022967 3300036712 Bacteria 4554
198 Ga0316584_0032355 3300036712 Bacteria 3871
199 Ga0316584_0053373 3300036712 Bacteria 3025
200 Ga0316584_0089556 3300036712 Bacteria 2304
201 Ga0373925_0000184 3300037068 Bacteria 68657
202 Ga0373925_0004311 3300037068 Bacteria 10774
203 Ga0395900_0066673 3300037418 Bacteria 3699
204 Ga0395898_0108093 3300037466 Bacteria 2667
205 Ga0395905_0050871 3300037471 Bacteria 3881
206 Ga0316581_0000980 3300037588 Bacteria 6085
207 Ga0436364_0290318 3300037853 Bacteria 7075
208 Ga0436364_0491033 3300037853 Bacteria 22482
209 Ga0436364_1353301 3300037853 Bacteria 4452
210 Ga0395901_0011664 3300038443 Bacteria 8901
211 Ga0436365_0231029 3300039437 Bacteria 9873
212 Ga0436365_1723272 3300039437 Bacteria 5844
213 Ga0436362_0463248 3300039453 Bacteria 7823
214 Ga0451795_1138129 3300041456 Bacteria 1838
215 Ga0451855_0038024 3300041511 Bacteria 2326
216 Ga0451577_0000030 3300042876 Bacteria 391423
217 Ga0451577_0000169 3300042876 Bacteria 144088
218 Ga0451577_0003138 3300042876 Bacteria 18621
219 Ga0451577_0024226 3300042876 Bacteria 5523
220 Ga0451577_0031901 3300042876 Bacteria 4750
221 Ga0451577_0034387 3300042876 Bacteria 4568
222 Ga0451577_0057884 3300042876 Bacteria 3454
223 Ga0451577_0164420 3300042876 Bacteria 1999
224 Ga0453683_0000040 3300044673 Bacteria 225430
225 Ga0453683_0000090 3300044673 Bacteria 137022
226 Ga0453683_0000417 3300044673 Bacteria 49665
227 Ga0453683_0000639 3300044673 Bacteria 37874
228 Ga0453683_0002005 3300044673 Bacteria 16461
229 Ga0453683_0015380 3300044673 Bacteria 4956
230 Ga0453684_0000139 3300044712 Bacteria 320330
231 Ga0453684_0000288 3300044712 Bacteria 216718
232 Ga0453684_0000461 3300044712 Bacteria 162371
233 Ga0453684_0000510 3300044712 Bacteria 151055
234 Ga0453684_0000536 3300044712 Bacteria 144088
235 Ga0453684_0000961 3300044712 Bacteria 94901
236 Ga0453684_0001104 3300044712 Bacteria 84830
237 Ga0453684_0002271 3300044712 Bacteria 47454
238 Ga0453684_0002672 3300044712 Bacteria 42477
239 Ga0453684_0007798 3300044712 Bacteria 19526
240 Ga0453684_0016244 3300044712 Bacteria 11662
241 Ga0453684_0048858 3300044712 Bacteria 5586
242 Ga0453684_0050022 3300044712 Bacteria 5502
243 Ga0453684_0053493 3300044712 Bacteria 5269
244 Ga0453684_0078361 3300044712 Bacteria 4135
245 Ga0453684_0090664 3300044712 Bacteria 3776
246 Ga0453684_0116617 3300044712 Bacteria 3233
247 Ga0453684_0157084 3300044712 Bacteria 2695
248 Ga0453684_0165378 3300044712 Bacteria 2612
249 Ga0453684_0190778 3300044712 Bacteria 2397
250 Ga0451576_0000172 3300045051 Bacteria 162376
251 Ga0451576_0000215 3300045051 Bacteria 144088
252 Ga0451576_0000760 3300045051 Bacteria 63689
253 Ga0451576_0001052 3300045051 Bacteria 50794
254 Ga0451576_0002226 3300045051 Bacteria 29843
255 Ga0451576_0008485 3300045051 Bacteria 12060
256 Ga0451576_0018289 3300045051 Bacteria 7686
257 Ga0451576_0032077 3300045051 Bacteria 5598
258 Ga0451576_0034026 3300045051 Bacteria 5414
259 Ga0451576_0064219 3300045051 Bacteria 3824
260 Ga0451576_0073854 3300045051 Bacteria 3549
261 Ga0451576_0074976 3300045051 Bacteria 3520
262 Ga0451576_0123711 3300045051 Bacteria 2694
263 Ga0495662_0010244 3300046476 Bacteria 4594
264 Ga0495608_0004216 3300046511 Bacteria 10304
265 Ga0495628_0000013 3300046516 Bacteria 211823
266 Ga0495628_0015107 3300046516 Bacteria 6449
267 Ga0495630_0000001 3300046517 Bacteria 1687293
268 Ga0495667_0000501 3300046559 Bacteria 24991
269 Ga0495674_0024276 3300047319 Bacteria 5573
270 Ga0495684_0026403 3300047471 Bacteria 4463
271 Ga0495686_0013815 3300047472 Bacteria 5591
272 Ga0496105_0004946 3300048908 Bacteria 10077
273 Ga0496110_0026489 3300048913 Bacteria 4962
274 Ga0496111_0016054 3300048914 Bacteria 5154
275 Ga0496112_0042045 3300048915 Bacteria 4472
276 Ga0496114_0006716 3300048917 Bacteria 9066
277 Ga0496114_0077857 3300048917 Bacteria 2797
278 Ga0496124_0002216 3300048927 Bacteria 25882
279 Ga0496126_0028569 3300048929 Bacteria 5313
280 Ga0501034_0020785 3300049571 Bacteria 6699
281 Ga0501036_0011670 3300049572 Bacteria 7281
282 Ga0501037_0022829 3300049573 Bacteria 4626
283 Ga0501038_0011970 3300049574 Bacteria 7920
284 Ga0501038_0029720 3300049574 Bacteria 4840
285 Ga0501040_0000005 3300049576 Bacteria 99976
286 Ga0501042_0000222 3300049578 Bacteria 27179
287 Ga0501046_0000006 3300049580 Bacteria 368565
288 Ga0501046_0047832 3300049580 Bacteria 3390
289 Ga0501047_0002159 3300049581 Bacteria 18814
290 Ga0501047_0010373 3300049581 Bacteria 8814
291 Ga0501047_0074792 3300049581 Bacteria 3261
292 Ga0501048_0037951 3300049582 Bacteria 3459
293 Ga0501070_0023227 3300049586 Bacteria 5195
294 Ga0501073_0040154 3300049589 Bacteria 3313
295 Ga0501074_0000210 3300049590 Bacteria 32109
296 Ga0501075_0009459 3300049591 Bacteria 6819
297 Ga0501035_0037312 3300049822 Bacteria 4401
298 Ga0501044_0000499 3300049823 Bacteria 47706
299 Ga0501044_0003630 3300049823 Bacteria 17364
300 Ga0501044_0044995 3300049823 Bacteria 4577
301 Ga0501044_0053434 3300049823 Bacteria 4156
302 nmdc:mga09592_11577_c1 3300050508 Bacteria 7174
303 nmdc:mga0qj67_57978_c1 3300050509 Bacteria 3070
304 nmdc:mga06r32_54137_c1 3300050510 Bacteria 3847
305 nmdc:mga08y16_100392_c1 3300050511 Bacteria 3013
306 nmdc:mga08y16_10813_c1 3300050511 Bacteria 9582
307 nmdc:mga08y16_12361_c1 3300050511 Bacteria 8978
308 nmdc:mga08y16_17301_c1 3300050511 Bacteria 7589
309 nmdc:mga08y16_515_c1 3300050511 Bacteria 35763
310 nmdc:mga08y16_92119_c1 3300050511 Bacteria 3158
311 nmdc:mga0n895_59779_c1 3300050512 Bacteria 3760
312 Ga0495601_0006480 3300053077 Bacteria 6846
313 Ga0500640_002460 3300053095 Bacteria 6129
314 Ga0500641_0007503 3300053096 Bacteria 3892
315 Ga0500595_001201 3300053119 Bacteria 14317
316 Ga0500559_0000958 3300053136 Bacteria 18080
317 Ga0500564_011976 3300053138 Bacteria 3842
318 Ga0500661_002483 3300055283 Bacteria 3479

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037588 Ga0316581_0000980 Ga0316581_0000980_45_1682 543
2 3300045051 Ga0451576_0018289 Ga0451576_0018289_28_1695 553
3 3300009545 Ga0105237_10003261 Ga0105237_1000326113 572
4 3300041456 Ga0451795_1138129 Ga0451795_1138129_88_1824 574
5 3300041511 Ga0451855_0038024 Ga0451855_0038024_16_1767 574
6 3300005563 Ga0068855_100041854 Ga0068855_1000418545 582
7 3300005614 Ga0068856_100006602 Ga0068856_1000066025 582
8 3300013102 Ga0157371_10012221 Ga0157371_100122215 582
9 3300013307 Ga0157372_10022545 Ga0157372_100225453 582
10 3300025949 Ga0207667_10036487 Ga0207667_100364872 582
11 3300026078 Ga0207702_10013778 Ga0207702_100137783 582
12 3300039453 Ga0436362_0463248 Ga0436362_0463248_600_2504 586
13 3300005617 Ga0068859_100077939 Ga0068859_1000779393 587
14 3300006931 Ga0097620_100077941 Ga0097620_1000779413 587
15 3300009093 Ga0105240_10003504 Ga0105240_1000350418 587
16 3300014325 Ga0163163_10025748 Ga0163163_100257484 587
17 3300025913 Ga0207695_10014819 Ga0207695_100148192 587
18 3300042876 Ga0451577_0003138 Ga0451577_0003138_6245_8137 587
19 3300044712 Ga0453684_0002271 Ga0453684_0002271_19522_21414 587
20 3300045051 Ga0451576_0001052 Ga0451576_0001052_29506_31398 587
21 3300048929 Ga0496126_0028569 Ga0496126_0028569_2154_4088 588
22 3300049574 Ga0501038_0029720 Ga0501038_0029720_1795_3729 588
23 3300049580 Ga0501046_0047832 Ga0501046_0047832_77_2011 588
24 3300049581 Ga0501047_0002159 Ga0501047_0002159_9657_11591 588
25 3300049586 Ga0501070_0023227 Ga0501070_0023227_3019_4953 588
26 3300049822 Ga0501035_0037312 Ga0501035_0037312_900_2822 588
27 3300049823 Ga0501044_0003630 Ga0501044_0003630_11837_13771 588
28 3300049823 Ga0501044_0044995 Ga0501044_0044995_1764_3686 588
29 3300044712 Ga0453684_0000961 Ga0453684_0000961_13807_15699 589
30 3300045051 Ga0451576_0064219 Ga0451576_0064219_1114_3006 589
31 3300049823 Ga0501044_0000499 Ga0501044_0000499_13607_15541 589
32 3300042876 Ga0451577_0024226 Ga0451577_0024226_1668_3560 593
33 3300044712 Ga0453684_0000288 Ga0453684_0000288_200561_202453 593
34 3300026035 Ga0207703_10114953 Ga0207703_101149532 597
35 3300021388 Ga0213875_10011276 Ga0213875_100112764 598
36 3300037853 Ga0436364_1353301 Ga0436364_1353301_763_2673 598
37 3300044712 Ga0453684_0090664 Ga0453684_0090664_1135_3087 599
38 3300049581 Ga0501047_0074792 Ga0501047_0074792_543_2429 599
39 3300035695 Ga0373927_0012679 Ga0373927_0012679_3484_5304 600
40 3300037068 Ga0373925_0000184 Ga0373925_0000184_25666_27486 600
41 3300036712 Ga0316584_0089556 Ga0316584_0089556_157_2046 601
42 3300037853 Ga0436364_0290318 Ga0436364_0290318_5114_7036 602
43 3300044712 Ga0453684_0048858 Ga0453684_0048858_3632_5524 602
44 3300044712 Ga0453684_0053493 Ga0453684_0053493_1093_2985 602
45 3300044712 Ga0453684_0165378 Ga0453684_0165378_271_2163 602
46 3300042876 Ga0451577_0000169 Ga0451577_0000169_25524_27416 603
47 3300044673 Ga0453683_0000417 Ga0453683_0000417_22250_24142 603
48 3300044712 Ga0453684_0000510 Ga0453684_0000510_131522_133417 603
49 3300044712 Ga0453684_0000536 Ga0453684_0000536_25524_27416 603
50 3300045051 Ga0451576_0000215 Ga0451576_0000215_116673_118565 603
51 3300007788 Ga0099795_10000013 Ga0099795_1000001357 604
52 3300010159 Ga0099796_10000090 Ga0099796_1000009015 604
53 3300027512 Ga0209179_1000007 Ga0209179_10000072 604
54 3300044712 Ga0453684_0157084 Ga0453684_0157084_765_2657 605
55 3300042876 Ga0451577_0164420 Ga0451577_0164420_61_1953 606
56 3300045051 Ga0451576_0034026 Ga0451576_0034026_60_1952 607
57 3300037418 Ga0395900_0066673 Ga0395900_0066673_1345_3231 608
58 3300044673 Ga0453683_0000090 Ga0453683_0000090_126318_128210 609
59 3300028653 Ga0265323_10000281 Ga0265323_100002814 611
60 3300031344 Ga0265316_10000823 Ga0265316_1000082312 611
61 3300006846 Ga0075430_100060750 Ga0075430_1000607502 612
62 3300050509 nmdc:mga0qj67_57978_c1 nmdc:mga0qj67_57978_c1_287_2206 612
63 3300049572 Ga0501036_0011670 Ga0501036_0011670_4653_6563 613
64 3300049574 Ga0501038_0011970 Ga0501038_0011970_3100_4989 613
65 3300049578 Ga0501042_0000222 Ga0501042_0000222_7031_8938 613
66 3300049582 Ga0501048_0037951 Ga0501048_0037951_1268_3178 613
67 3300049590 Ga0501074_0000210 Ga0501074_0000210_17667_19556 613
68 3300031344 Ga0265316_10003180 Ga0265316_1000318010 614
69 3300031727 Ga0316576_10016522 Ga0316576_100165222 614
70 3300035398 Ga0316574_0011278 Ga0316574_0011278_2075_3949 614
71 3300025242 Ga0209258_100391 Ga0209258_10039112 615
72 3300031665 Ga0316575_10011026 Ga0316575_100110261 615
73 3300031731 Ga0307405_10019054 Ga0307405_100190542 615
74 3300045051 Ga0451576_0008485 Ga0451576_0008485_4567_6468 616
75 3300031251 Ga0265327_10000229 Ga0265327_1000022937 617
76 3300031691 Ga0316579_10032449 Ga0316579_100324492 618
77 3300036647 Ga0316582_0014365 Ga0316582_0014365_1626_3542 618
78 3300053138 Ga0500564_011976 Ga0500564_011976_1474_3360 618
79 3300055283 Ga0500661_002483 Ga0500661_002483_697_2583 618
80 3300005355 Ga0070671_100034835 Ga0070671_1000348352 619
81 3300009094 Ga0111539_10007762 Ga0111539_100077628 619
82 3300025931 Ga0207644_10042897 Ga0207644_100428972 619
83 3300036712 Ga0316584_0014529 Ga0316584_0014529_3679_5568 619
84 3300050511 nmdc:mga08y16_515_c1 nmdc:mga08y16_515_c1_28839_30815 619
85 3300005331 Ga0070670_100000018 Ga0070670_100000018180 620
86 3300005353 Ga0070669_100000954 Ga0070669_1000009547 620
87 3300005355 Ga0070671_100000084 Ga0070671_10000008418 620
88 3300005365 Ga0070688_100000916 Ga0070688_1000009166 620
89 3300005367 Ga0070667_100000002 Ga0070667_100000002119 620
90 3300005466 Ga0070685_10000009 Ga0070685_10000009157 620
91 3300005548 Ga0070665_100005696 Ga0070665_1000056962 620
92 3300005617 Ga0068859_100005849 Ga0068859_10000584910 620
93 3300005618 Ga0068864_100000002 Ga0068864_100000002361 620
94 3300005843 Ga0068860_100000499 Ga0068860_10000049938 620
95 3300006931 Ga0097620_100005850 Ga0097620_10000585010 620
96 3300014325 Ga0163163_10000627 Ga0163163_1000062711 620
97 3300025923 Ga0207681_10000509 Ga0207681_1000050913 620
98 3300025925 Ga0207650_10000002 Ga0207650_10000002356 620
99 3300025941 Ga0207711_10007991 Ga0207711_100079912 620
100 3300025986 Ga0207658_10000001 Ga0207658_10000001996 620
101 3300026088 Ga0207641_10009154 Ga0207641_100091544 620
102 3300026088 Ga0207641_10022739 Ga0207641_100227393 620
103 3300026095 Ga0207676_10000001 Ga0207676_10000001356 620
104 3300028380 Ga0268265_10000455 Ga0268265_1000045530 620
105 3300028381 Ga0268264_10000004 Ga0268264_10000004374 620
106 3300031727 Ga0316576_10006773 Ga0316576_100067733 620
107 3300031728 Ga0316578_10003566 Ga0316578_100035663 620
108 3300031733 Ga0316577_10002546 Ga0316577_100025468 620
109 3300036712 Ga0316584_0001688 Ga0316584_0001688_7363_9243 620
110 3300036712 Ga0316584_0022967 Ga0316584_0022967_1188_3077 620
111 3300042876 Ga0451577_0034387 Ga0451577_0034387_2074_3951 620
112 3300044712 Ga0453684_0016244 Ga0453684_0016244_4146_6023 620
113 3300048927 Ga0496124_0002216 Ga0496124_0002216_1672_3558 620
114 3300031727 Ga0316576_10009794 Ga0316576_100097942 621
115 3300044712 Ga0453684_0002672 Ga0453684_0002672_3778_5670 621
116 iso_pu_bacteria 2690315857 2691332709 621
117 iso_pu_bacteria 2919534386 2919537832 621
118 iso_pu_bacteria 2919688452 2919691189 621
119 iso_pu_bacteria 2952252522 2952255854 621
120 3300028381 Ga0268264_10119364 Ga0268264_101193642 622
121 3300031691 Ga0316579_10048334 Ga0316579_100483341 622
122 3300031727 Ga0316576_10012433 Ga0316576_100124334 622
123 3300031728 Ga0316578_10027362 Ga0316578_100273622 622
124 3300031728 Ga0316578_10032004 Ga0316578_100320042 622
125 3300031728 Ga0316578_10053810 Ga0316578_100538102 622
126 3300031733 Ga0316577_10024528 Ga0316577_100245282 622
127 3300032139 Ga0316580_10014426 Ga0316580_100144261 622
128 3300036647 Ga0316582_0004433 Ga0316582_0004433_4783_6681 622
129 3300036712 Ga0316584_0000057 Ga0316584_0000057_34814_36712 622
130 3300031691 Ga0316579_10000880 Ga0316579_100008805 623
131 3300031728 Ga0316578_10005051 Ga0316578_100050514 623
132 3300031733 Ga0316577_10002190 Ga0316577_100021905 623
133 3300036712 Ga0316584_0032355 Ga0316584_0032355_1532_3427 623
134 iso_pu_bacteria 2919493220 2919496092 623
135 iso_pu_bacteria 2919543075 2919544370 623
136 iso_pu_bacteria 2923525760 2923527871 623
137 3300005367 Ga0070667_100051517 Ga0070667_1000515171 624
138 3300005841 Ga0068863_100024372 Ga0068863_1000243724 624
139 3300005842 Ga0068858_100060681 Ga0068858_1000606812 624
140 3300005843 Ga0068860_100037912 Ga0068860_1000379123 624
141 3300006358 Ga0068871_100010752 Ga0068871_1000107523 624
142 3300009098 Ga0105245_10011177 Ga0105245_100111774 624
143 3300009176 Ga0105242_10022793 Ga0105242_100227933 624
144 3300010375 Ga0105239_10008250 Ga0105239_100082506 624
145 3300013296 Ga0157374_10019621 Ga0157374_100196212 624
146 3300013297 Ga0157378_10038562 Ga0157378_100385622 624
147 3300013306 Ga0163162_10018941 Ga0163162_100189414 624
148 3300013308 Ga0157375_10007756 Ga0157375_100077569 624
149 3300014325 Ga0163163_10050527 Ga0163163_100505273 624
150 3300021384 Ga0213876_10015616 Ga0213876_100156162 624
151 3300028381 Ga0268264_10033580 Ga0268264_100335804 624
152 3300031691 Ga0316579_10000335 Ga0316579_100003354 624
153 3300031691 Ga0316579_10001951 Ga0316579_100019513 624
154 3300032133 Ga0316583_10001046 Ga0316583_100010467 624
155 3300035398 Ga0316574_0060239 Ga0316574_0060239_84_2000 624
156 3300036647 Ga0316582_0020956 Ga0316582_0020956_496_2385 624
157 3300039437 Ga0436365_0231029 Ga0436365_0231029_1008_2900 624
158 3300048908 Ga0496105_0004946 Ga0496105_0004946_1124_3115 624
159 3300048913 Ga0496110_0026489 Ga0496110_0026489_630_2621 624
160 3300048914 Ga0496111_0016054 Ga0496111_0016054_1652_3643 624
161 3300048917 Ga0496114_0077857 Ga0496114_0077857_493_2484 624
162 3300049573 Ga0501037_0022829 Ga0501037_0022829_177_2066 624
163 3300049576 Ga0501040_0000005 Ga0501040_0000005_87913_89820 624
164 3300049591 Ga0501075_0009459 Ga0501075_0009459_3529_5418 624
165 iso_pu_bacteria 2687453129 2687577623 624
166 iso_pu_bacteria 8057160832 8057162504 624
167 3300031691 Ga0316579_10001031 Ga0316579_100010316 625
168 3300031733 Ga0316577_10002906 Ga0316577_100029066 625
169 3300036647 Ga0316582_0037385 Ga0316582_0037385_491_2380 625
170 3300036712 Ga0316584_0007300 Ga0316584_0007300_4921_6810 625
171 iso_pu_bacteria 2524614857 2526062685 625
172 iso_pu_bacteria 2739367875 2740062022 625
173 3300044712 Ga0453684_0001104 Ga0453684_0001104_78662_80560 626
174 3300028573 Ga0265334_10019692 Ga0265334_100196921 627
175 3300031344 Ga0265316_10072500 Ga0265316_100725002 627
176 3300042876 Ga0451577_0000030 Ga0451577_0000030_344745_346634 627
177 3300042876 Ga0451577_0031901 Ga0451577_0031901_769_2658 627
178 3300044673 Ga0453683_0000040 Ga0453683_0000040_149196_151085 627
179 3300044673 Ga0453683_0000639 Ga0453683_0000639_29153_31045 627
180 3300044673 Ga0453683_0002005 Ga0453683_0002005_6322_8211 627
181 3300044712 Ga0453684_0000139 Ga0453684_0000139_25105_26997 627
182 3300044712 Ga0453684_0000461 Ga0453684_0000461_44790_46679 627
183 3300044712 Ga0453684_0050022 Ga0453684_0050022_1880_3772 627
184 3300044712 Ga0453684_0078361 Ga0453684_0078361_1721_3613 627
185 3300044712 Ga0453684_0190778 Ga0453684_0190778_279_2171 627
186 3300045051 Ga0451576_0000172 Ga0451576_0000172_115684_117573 627
187 3300045051 Ga0451576_0000760 Ga0451576_0000760_29036_30928 627
188 3300045051 Ga0451576_0002226 Ga0451576_0002226_20246_22138 627
189 3300045051 Ga0451576_0032077 Ga0451576_0032077_1428_3317 627
190 3300025918 Ga0207662_10039088 Ga0207662_100390881 628
191 3300044712 Ga0453684_0007798 Ga0453684_0007798_1225_3120 628
192 3300044712 Ga0453684_0116617 Ga0453684_0116617_137_2032 628
193 3300045051 Ga0451576_0073854 Ga0451576_0073854_53_1948 628
194 3300006028 Ga0070717_10026055 Ga0070717_100260554 629
195 3300031728 Ga0316578_10001260 Ga0316578_100012607 629
196 3300032139 Ga0316580_10001642 Ga0316580_100016424 629
197 3300035398 Ga0316574_0002136 Ga0316574_0002136_6473_8422 629
198 3300036712 Ga0316584_0000157 Ga0316584_0000157_12015_13910 629
199 3300036712 Ga0316584_0053373 Ga0316584_0053373_788_2737 629
200 3300037471 Ga0395905_0050871 Ga0395905_0050871_106_1998 629
201 3300005330 Ga0070690_100011692 Ga0070690_1000116924 630
202 3300005340 Ga0070689_100081946 Ga0070689_1000819461 630
203 3300005548 Ga0070665_100029894 Ga0070665_1000298942 630
204 3300005563 Ga0068855_100024188 Ga0068855_1000241885 630
205 3300006028 Ga0070717_10009428 Ga0070717_100094283 630
206 3300006844 Ga0075428_100000078 Ga0075428_1000000782 630
207 3300009094 Ga0111539_10004462 Ga0111539_100044629 630
208 3300025936 Ga0207670_10038695 Ga0207670_100386952 630
209 3300028379 Ga0268266_10000993 Ga0268266_1000099316 630
210 3300028786 Ga0307517_10031436 Ga0307517_100314362 630
211 3300028794 Ga0307515_10062973 Ga0307515_100629733 630
212 3300029957 Ga0265324_10000051 Ga0265324_1000005147 630
213 3300031238 Ga0265332_10003964 Ga0265332_100039644 630
214 3300031507 Ga0307509_10002621 Ga0307509_100026215 630
215 3300031507 Ga0307509_10137589 Ga0307509_101375891 630
216 3300031901 Ga0307406_10007327 Ga0307406_100073275 630
217 3300033179 Ga0307507_10046148 Ga0307507_100461481 630
218 3300035113 Ga0373936_0000004 Ga0373936_0000004_219680_221665 630
219 3300035241 Ga0373961_0000018 Ga0373961_0000018_34155_36137 630
220 3300036401 Ga0373937_0039595 Ga0373937_0039595_357_2372 630
221 3300037853 Ga0436364_0491033 Ga0436364_0491033_6673_8577 630
222 3300042876 Ga0451577_0057884 Ga0451577_0057884_1549_3444 630
223 3300047472 Ga0495686_0013815 Ga0495686_0013815_1304_3244 630
224 3300049571 Ga0501034_0020785 Ga0501034_0020785_1780_3678 630
225 3300049580 Ga0501046_0000006 Ga0501046_0000006_306122_308020 630
226 3300050511 nmdc:mga08y16_10813_c1 nmdc:mga08y16_10813_c1_4737_6854 630
227 3300005331 Ga0070670_100016868 Ga0070670_1000168684 631
228 3300005340 Ga0070689_100006409 Ga0070689_1000064093 631
229 3300005467 Ga0070706_100014398 Ga0070706_1000143982 631
230 3300005471 Ga0070698_100006335 Ga0070698_1000063353 631
231 3300005546 Ga0070696_100053417 Ga0070696_1000534172 631
232 3300006844 Ga0075428_100013811 Ga0075428_1000138118 631
233 3300006844 Ga0075428_100130237 Ga0075428_1001302372 631
234 3300006847 Ga0075431_100059607 Ga0075431_1000596072 631
235 3300006880 Ga0075429_100011059 Ga0075429_1000110592 631
236 3300006880 Ga0075429_100049178 Ga0075429_1000491782 631
237 3300009094 Ga0111539_10006836 Ga0111539_100068368 631
238 3300013296 Ga0157374_10054704 Ga0157374_100547043 631
239 3300014968 Ga0157379_10000046 Ga0157379_1000004662 631
240 3300021384 Ga0213876_10045248 Ga0213876_100452481 631
241 3300025925 Ga0207650_10010832 Ga0207650_100108322 631
242 3300028800 Ga0265338_10017322 Ga0265338_100173224 631
243 3300031507 Ga0307509_10004505 Ga0307509_100045051 631
244 3300031727 Ga0316576_10009016 Ga0316576_100090163 631
245 3300031730 Ga0307516_10044168 Ga0307516_100441683 631
246 3300035170 Ga0373943_0026054 Ga0373943_0026054_732_2693 631
247 3300035398 Ga0316574_0014442 Ga0316574_0014442_537_2447 631
248 3300035692 Ga0373935_0071040 Ga0373935_0071040_29_1990 631
249 3300035724 Ga0373933_0032710 Ga0373933_0032710_96_2021 631
250 3300036712 Ga0316584_0003396 Ga0316584_0003396_7309_9222 631
251 3300037068 Ga0373925_0004311 Ga0373925_0004311_54_1979 631
252 3300037466 Ga0395898_0108093 Ga0395898_0108093_376_2313 631
253 3300038443 Ga0395901_0011664 Ga0395901_0011664_592_2529 631
254 3300039437 Ga0436365_1723272 Ga0436365_1723272_1795_3732 631
255 3300044673 Ga0453683_0015380 Ga0453683_0015380_142_2196 631
256 3300046476 Ga0495662_0010244 Ga0495662_0010244_2561_4486 631
257 3300046511 Ga0495608_0004216 Ga0495608_0004216_6214_8316 631
258 3300046516 Ga0495628_0015107 Ga0495628_0015107_2097_4178 631
259 3300046517 Ga0495630_0000001 Ga0495630_0000001_1597170_1599095 631
260 3300046559 Ga0495667_0000501 Ga0495667_0000501_11650_13752 631
261 3300049581 Ga0501047_0010373 Ga0501047_0010373_5218_7155 631
262 3300049589 Ga0501073_0040154 Ga0501073_0040154_532_2457 631
263 3300049823 Ga0501044_0053434 Ga0501044_0053434_969_2906 631
264 3300050508 nmdc:mga09592_11577_c1 nmdc:mga09592_11577_c1_690_2627 631
265 3300050511 nmdc:mga08y16_17301_c1 nmdc:mga08y16_17301_c1_2471_4390 631
266 3300050511 nmdc:mga08y16_92119_c1 nmdc:mga08y16_92119_c1_499_2565 631
267 3300050512 nmdc:mga0n895_59779_c1 nmdc:mga0n895_59779_c1_485_2395 631
268 3300053095 Ga0500640_002460 Ga0500640_002460_1412_3538 631
269 3300053119 Ga0500595_001201 Ga0500595_001201_1574_3700 631
270 3300053136 Ga0500559_0000958 Ga0500559_0000958_11164_13290 631
271 3300031852 Ga0307410_10037694 Ga0307410_100376942 632
272 3300031903 Ga0307407_10017426 Ga0307407_100174262 632
273 3300032005 Ga0307411_10002146 Ga0307411_100021462 632
274 3300045051 Ga0451576_0123711 Ga0451576_0123711_103_2037 632
275 3300046516 Ga0495628_0000013 Ga0495628_0000013_93949_95928 632
276 3300047319 Ga0495674_0024276 Ga0495674_0024276_448_2361 632
277 3300047471 Ga0495684_0026403 Ga0495684_0026403_574_2553 632
278 3300005471 Ga0070698_100000424 Ga0070698_10000042428 633
279 3300005536 Ga0070697_100020069 Ga0070697_1000200693 633
280 3300025910 Ga0207684_10001946 Ga0207684_100019462 633
281 3300005330 Ga0070690_100051317 Ga0070690_1000513171 635
282 3300005337 Ga0070682_100005252 Ga0070682_1000052525 635
283 3300005354 Ga0070675_100058940 Ga0070675_1000589402 635
284 3300005365 Ga0070688_100041580 Ga0070688_1000415803 635
285 3300005617 Ga0068859_100039328 Ga0068859_1000393283 635
286 3300005719 Ga0068861_100021445 Ga0068861_1000214453 635
287 3300006847 Ga0075431_100029057 Ga0075431_1000290574 635
288 3300006931 Ga0097620_100039327 Ga0097620_1000393272 635
289 3300026118 Ga0207675_100041171 Ga0207675_1000411713 635
290 3300050510 nmdc:mga06r32_54137_c1 nmdc:mga06r32_54137_c1_890_2995 635
291 3300053096 Ga0500641_0007503 Ga0500641_0007503_1831_3801 635
292 3300005331 Ga0070670_100042798 Ga0070670_1000427983 636
293 3300005344 Ga0070661_100033486 Ga0070661_1000334862 636
294 3300005355 Ga0070671_100051733 Ga0070671_1000517332 636
295 3300005367 Ga0070667_100026040 Ga0070667_1000260402 636
296 3300005535 Ga0070684_100014891 Ga0070684_1000148915 636
297 3300005564 Ga0070664_100026996 Ga0070664_1000269963 636
298 3300005617 Ga0068859_100062418 Ga0068859_1000624182 636
299 3300006931 Ga0097620_100062423 Ga0097620_1000624232 636
300 3300009098 Ga0105245_10046700 Ga0105245_100467003 636
301 3300009101 Ga0105247_10025818 Ga0105247_100258182 636
302 3300009177 Ga0105248_10016746 Ga0105248_100167462 636
303 3300011119 Ga0105246_10020033 Ga0105246_100200332 636
304 3300014325 Ga0163163_10017618 Ga0163163_100176182 636
305 3300014968 Ga0157379_10024724 Ga0157379_100247242 636
306 3300025936 Ga0207670_10050527 Ga0207670_100505272 636
307 3300025941 Ga0207711_10021131 Ga0207711_100211313 636
308 3300026088 Ga0207641_10044795 Ga0207641_100447952 636
309 3300028379 Ga0268266_10068168 Ga0268266_100681682 636
310 3300028381 Ga0268264_10029452 Ga0268264_100294522 636
311 3300036401 Ga0373937_0007362 Ga0373937_0007362_3999_5972 636
312 3300045051 Ga0451576_0074976 Ga0451576_0074976_163_2136 636
313 3300048915 Ga0496112_0042045 Ga0496112_0042045_563_2536 636
314 3300048917 Ga0496114_0006716 Ga0496114_0006716_2668_4641 636
315 3300050511 nmdc:mga08y16_100392_c1 nmdc:mga08y16_100392_c1_1006_2982 636
316 3300053077 Ga0495601_0006480 Ga0495601_0006480_3054_5027 636
317 3300009094 Ga0111539_10009278 Ga0111539_100092785 637
318 3300027907 Ga0207428_10009007 Ga0207428_100090072 637
319 3300050511 nmdc:mga08y16_12361_c1 nmdc:mga08y16_12361_c1_2794_4890 637
320 3300004801 Ga0058860_12022602 Ga0058860_120226022 638
321 3300005441 Ga0070700_100053238 Ga0070700_1000532382 638
322 3300005983 Ga0081540_1011379 Ga0081540_10113792 638
323 3300006846 Ga0075430_100012985 Ga0075430_1000129853 638
324 3300006847 Ga0075431_100029429 Ga0075431_1000294295 638
325 3300026075 Ga0207708_10079392 Ga0207708_100793921 638
326 3300003911 JGI25405J52794_10000036 JGI25405J52794_1000003614 639
327 3300005467 Ga0070706_100086324 Ga0070706_1000863241 639
328 3300005937 Ga0081455_10000195 Ga0081455_1000019538 639
329 3300005981 Ga0081538_10025731 Ga0081538_100257313 639

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17944

Arg_decarbox_C

Arginine decarboxylase C-terminal helical extension

652

705

0.99

PF17810

Arg_decarb_HB

Arginine decarboxylase helical bundle domain

442

524

0.97

PF02784

Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

153

418

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nzp-assembly2.cif.gz_A-2 crystal structure of the biosynthetic arginine decarboxylase spea from campylobacter jejuni, northeast structural genomics consortium target br53 0.9242 20 639
3nzp-assembly2.cif.gz_A-2 crystal structure of the biosynthetic arginine decarboxylase spea from campylobacter jejuni, northeast structural genomics consortium target br53 0.9181 20 639
3nzp-assembly2.cif.gz_B crystal structure of the biosynthetic arginine decarboxylase spea from campylobacter jejuni, northeast structural genomics consortium target br53 0.9117 20 638
3n2o-assembly2.cif.gz_C x-ray crystal structure of arginine decarboxylase complexed with arginine from vibrio vulnificus 0.9077 16 637
3nzq-assembly1.cif.gz_A crystal structure of biosynthetic arginine decarboxylase adc (spea) from escherichia coli, northeast structural genomics consortium target er600 0.9068 16 639
ID Description Score Start End Superfamily
af_B7ZYV4_72_368_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9624 74 347 3.20.20.10
3nzpB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9313 76 347 3.20.20.10
3nzpB03 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.9295 370 441 1.20.58.930
3nzqB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9185 76 351 3.20.20.10
3nzqB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9051 76 351 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A1B1FIU9-F1-model_v4 Arginine decarboxylase (EC 4.1.1.19) 0.9863 129 299 GO:0006527
GO:0008295
GO:0008792
GO:0009446
AF-A0A7X6YUV0-F1-model_v4 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.9852 9 348 GO:0006527
GO:0008295
GO:0008792
AF-A0A3N5Q3Y8-F1-model_v4 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.985 9 315 GO:0006527
GO:0008295
GO:0008792
AF-A0A2V7XKB2-F1-model_v4 Arginine decarboxylase (EC 4.1.1.19) 0.9843 8 575 GO:0006527
GO:0008295
GO:0008792
GO:0046872
AF-A0A3D5XA35-F1-model_v4 Biosynthetic arginine decarboxylase 0.9837 69 352 GO:0006527
GO:0008295
GO:0008792

Feature Viewer

pLDDT pTM Quality
89.79 0.87 High
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Predicted Structure (AlphaFold2)

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