F409793

General Info

Members Datasets Scaffolds Average Seq Length
329 201 658 299

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0059386|Ga0451576_0059386_2470_3486
Length 338
Sequence VAARDANGTNRASMPRQLTQTQQEMRMKRMSSKRTGVSERPKTNGNNASSDGQPALLRELVSHLRHNRTQLREEWARRITDARLLTAMSEEEIFSEATSVYDNYVEVLETGSVEALQAYARDLSERIIPRGVETHEVVGIVLLLRDVLARSLFKKYQTDFDLLNRVLDAYEPAANRIANTVAVSFVQERERIIRQQQEAFRELSTPVLQVRERLLIVPIIGVIDSQRARQLTEQLLRGIRNNRAKVVVVDVTGVPTIDSTVANHLVQTVEASRLMGASVIITGLSSAIAQTLVTIGVDLSKMNAVGDLQGGIEEAESLIGYKTVPVAEAPSKEPEVRG

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
55 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
69 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
72 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
106 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
107 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
108 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
118 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
119 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
120 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
121 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
122 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
123 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
130 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
131 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
132 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
133 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
134 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
135 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
136 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
137 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
138 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
139 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
140 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
141 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
142 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
143 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
144 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
145 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
146 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
147 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
148 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
149 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
150 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
151 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
152 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
153 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
154 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
155 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
156 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
157 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
158 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
159 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
160 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
161 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
162 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
163 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
164 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
165 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
166 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
167 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
168 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
169 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
170 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
171 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
172 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
173 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
174 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
175 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
176 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
177 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
178 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
184 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
185 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
186 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
187 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
188 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
189 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
190 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
191 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
192 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
193 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
194 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
195 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
196 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
197 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
198 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
199 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
200 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
201 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.48
Metatranscriptomes 1.22
Isolates 0.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.91
Nodule 0
Rhizoplane 3.04
Rhizosphere 94.83
Stem 0
Stem Tuber 0
Unclassified 1.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0059386 3300045051 Bacteria 3992
2 JGI24735J21928_10028923 3300002067 Bacteria 1653
3 JGI25407J50210_10015406 3300003373 Bacteria 1974
4 Ga0058862_11747516 3300004803 Bacteria 1851
5 Ga0070683_100016113 3300005329 Bacteria 6580
6 Ga0070683_100017313 3300005329 Bacteria 6369
7 Ga0070690_100061288 3300005330 Bacteria 2423
8 Ga0070690_100234463 3300005330 Bacteria 1292
9 Ga0070680_100002768 3300005336 Bacteria 13019
10 Ga0070682_100006566 3300005337 Bacteria 6527
11 Ga0070660_100002814 3300005339 Bacteria 11970
12 Ga0070689_100016824 3300005340 Bacteria 5360
13 Ga0070689_100036438 3300005340 Bacteria 3763
14 Ga0070691_10150124 3300005341 Bacteria 1194
15 Ga0070661_100004671 3300005344 Bacteria 9432
16 Ga0070688_100242477 3300005365 Bacteria 1280
17 Ga0070659_100005303 3300005366 Bacteria 9247
18 Ga0070714_100225144 3300005435 Bacteria 1726
19 Ga0070713_100038335 3300005436 Bacteria 3882
20 Ga0070711_100015160 3300005439 Bacteria 4873
21 Ga0070705_100003964 3300005440 Bacteria 7232
22 Ga0070705_100074300 3300005440 Bacteria 2066
23 Ga0070694_100007513 3300005444 Bacteria 6650
24 Ga0070694_100020080 3300005444 Bacteria 4256
25 Ga0070681_10012012 3300005458 Bacteria 8586
26 Ga0070706_100007158 3300005467 Bacteria 10489
27 Ga0070706_100053385 3300005467 Bacteria 3731
28 Ga0070706_100090386 3300005467 Bacteria 2839
29 Ga0070707_100029045 3300005468 Bacteria 5263
30 Ga0070707_100112402 3300005468 Bacteria 2642
31 Ga0070698_100001691 3300005471 Bacteria 24608
32 Ga0070698_100015581 3300005471 Bacteria 8028
33 Ga0070698_100023991 3300005471 Bacteria 6369
34 Ga0070698_100039262 3300005471 Bacteria 4874
35 Ga0070699_100000487 3300005518 Bacteria 37722
36 Ga0070699_100001008 3300005518 Bacteria 26211
37 Ga0070699_100001682 3300005518 Bacteria 20166
38 Ga0070679_100000204 3300005530 Bacteria 48597
39 Ga0070679_100009949 3300005530 Bacteria 9001
40 Ga0070684_100004114 3300005535 Bacteria 11006
41 Ga0070697_100001902 3300005536 Bacteria 15967
42 Ga0068853_100026203 3300005539 Bacteria 4895
43 Ga0070686_100005843 3300005544 Bacteria 6820
44 Ga0070686_100117430 3300005544 Bacteria 1822
45 Ga0070686_100199916 3300005544 Bacteria 1432
46 Ga0070695_100039074 3300005545 Bacteria 2997
47 Ga0070695_100397563 3300005545 Bacteria 1044
48 Ga0070696_100000409 3300005546 Bacteria 26728
49 Ga0070696_100082067 3300005546 Bacteria 2285
50 Ga0070696_100186719 3300005546 Bacteria 1541
51 Ga0070704_100003260 3300005549 Bacteria 9272
52 Ga0070704_100014136 3300005549 Bacteria 4978
53 Ga0070704_100066546 3300005549 Bacteria 2599
54 Ga0068855_100082819 3300005563 Bacteria 3718
55 Ga0070664_100170438 3300005564 Bacteria 1931
56 Ga0068856_100009433 3300005614 Bacteria 9476
57 Ga0068856_100075292 3300005614 Bacteria 3344
58 Ga0068856_100383477 3300005614 Bacteria 1425
59 Ga0068852_100003295 3300005616 Bacteria 11278
60 Ga0068852_100667256 3300005616 Bacteria 1048
61 Ga0068859_100147486 3300005617 Bacteria 2428
62 Ga0068859_100222051 3300005617 Bacteria 1977
63 Ga0068859_100480002 3300005617 Bacteria 1339
64 Ga0068863_100050628 3300005841 Bacteria 3937
65 Ga0068863_100051744 3300005841 Bacteria 3892
66 Ga0068858_100131621 3300005842 Bacteria 2346
67 Ga0068860_100112981 3300005843 Bacteria 2597
68 Ga0081538_10003221 3300005981 Bacteria 15510
69 Ga0081538_10005106 3300005981 Bacteria 11920
70 Ga0081538_10005986 3300005981 Bacteria 10823
71 Ga0081538_10010369 3300005981 Bacteria 7644
72 Ga0081540_1037857 3300005983 Bacteria 2551
73 Ga0075365_10090890 3300006038 Bacteria 2079
74 Ga0075432_10000074 3300006058 Bacteria 19936
75 Ga0075432_10029552 3300006058 Bacteria 1893
76 Ga0075428_100002684 3300006844 Bacteria 19346
77 Ga0075428_100144556 3300006844 Bacteria 2585
78 Ga0075428_100571707 3300006844 Bacteria 1208
79 Ga0075430_100001895 3300006846 Bacteria 17144
80 Ga0075431_100109572 3300006847 Bacteria 2850
81 Ga0075433_10026864 3300006852 Bacteria 4878
82 Ga0075433_10029225 3300006852 Bacteria 4694
83 Ga0075433_10039053 3300006852 Bacteria 4102
84 Ga0075433_10100595 3300006852 Bacteria 2560
85 Ga0075433_10143208 3300006852 Bacteria 2125
86 Ga0075434_100005170 3300006871 Bacteria 11850
87 Ga0075434_100007252 3300006871 Bacteria 10258
88 Ga0075434_100015221 3300006871 Bacteria 7371
89 Ga0075434_100031679 3300006871 Bacteria 5213
90 Ga0075434_100037261 3300006871 Bacteria 4814
91 Ga0075434_100048241 3300006871 Bacteria 4226
92 Ga0075429_100218804 3300006880 Bacteria 1668
93 Ga0075436_100007749 3300006914 Bacteria 7342
94 Ga0075436_100020947 3300006914 Bacteria 4485
95 Ga0075436_100360659 3300006914 Bacteria 1048
96 Ga0097620_100147488 3300006931 Bacteria 2428
97 Ga0097620_100222051 3300006931 Bacteria 1977
98 Ga0097620_100479991 3300006931 Bacteria 1339
99 Ga0075435_100005287 3300007076 Bacteria 8995
100 Ga0075435_100014501 3300007076 Bacteria 5893
101 Ga0075435_100113635 3300007076 Bacteria 2254
102 Ga0099794_10040710 3300007265 Bacteria 2211
103 Ga0099794_10157652 3300007265 Bacteria 1154
104 Ga0099795_10002284 3300007788 Bacteria 4465
105 Ga0105240_10201640 3300009093 Bacteria 2331
106 Ga0111539_10003882 3300009094 Bacteria 19674
107 Ga0111539_10016545 3300009094 Bacteria 9142
108 Ga0111539_10086185 3300009094 Bacteria 3691
109 Ga0111539_10095196 3300009094 Bacteria 3498
110 Ga0111539_10096601 3300009094 Bacteria 3471
111 Ga0111539_10163439 3300009094 Bacteria 2604
112 Ga0105245_10024339 3300009098 Bacteria 5315
113 Ga0105245_10067174 3300009098 Bacteria 3247
114 Ga0105247_10049283 3300009101 Bacteria 2589
115 Ga0114129_10035836 3300009147 Bacteria 7006
116 Ga0114129_10040787 3300009147 Bacteria 6544
117 Ga0114129_10096052 3300009147 Bacteria 4104
118 Ga0114129_10209564 3300009147 Bacteria 2635
119 Ga0114129_10228768 3300009147 Bacteria 2505
120 Ga0114129_10674570 3300009147 Bacteria 1331
121 Ga0105237_10031160 3300009545 Bacteria 5409
122 Ga0105238_10003353 3300009551 Bacteria 15983
123 Ga0105238_10006427 3300009551 Bacteria 11692
124 Ga0105239_10023385 3300010375 Bacteria 6805
125 Ga0157370_10063785 3300013104 Bacteria 3489
126 Ga0157370_10511102 3300013104 Bacteria 1103
127 Ga0157369_10017515 3300013105 Bacteria 8050
128 Ga0157369_10040030 3300013105 Bacteria 5119
129 Ga0157369_10147576 3300013105 Bacteria 2486
130 Ga0157372_10080134 3300013307 Bacteria 3693
131 Ga0157372_10308169 3300013307 Bacteria 1843
132 Ga0157380_10153135 3300014326 Bacteria 1996
133 Ga0182008_10027788 3300014497 Bacteria 2863
134 Ga0206356_11143398 3300020070 Bacteria 1958
135 Ga0206353_10415169 3300020082 Bacteria 1193
136 Ga0206353_11390319 3300020082 Bacteria 7704
137 Ga0213875_10051158 3300021388 Unclassified 1935
138 Ga0207653_10011316 3300025885 Bacteria 2785
139 Ga0207710_10028428 3300025900 Bacteria 2427
140 Ga0207684_10007464 3300025910 Bacteria 9840
141 Ga0207684_10022636 3300025910 Bacteria 5364
142 Ga0207684_10053697 3300025910 Bacteria 3420
143 Ga0207707_10001494 3300025912 Bacteria 21591
144 Ga0207695_10027597 3300025913 Bacteria 6319
145 Ga0207671_10090392 3300025914 Bacteria 2306
146 Ga0207663_10011096 3300025916 Bacteria 4825
147 Ga0207660_10024752 3300025917 Bacteria 4066
148 Ga0207649_10004323 3300025920 Bacteria 7720
149 Ga0207652_10004433 3300025921 Bacteria 11440
150 Ga0207652_10009827 3300025921 Bacteria 7700
151 Ga0207646_10004882 3300025922 Bacteria 14364
152 Ga0207646_10397276 3300025922 Bacteria 1245
153 Ga0207694_10006436 3300025924 Bacteria 8947
154 Ga0207687_10036909 3300025927 Bacteria 3331
155 Ga0207687_10109209 3300025927 Unclassified 2049
156 Ga0207700_10018864 3300025928 Bacteria 4647
157 Ga0207664_10118113 3300025929 Bacteria 2215
158 Ga0207690_10007016 3300025932 Bacteria 6678
159 Ga0207709_10189724 3300025935 Bacteria 1459
160 Ga0207670_10004506 3300025936 Bacteria 7505
161 Ga0207670_10011169 3300025936 Bacteria 5203
162 Ga0207670_10128141 3300025936 Bacteria 1855
163 Ga0207704_10233765 3300025938 Bacteria 1369
164 Ga0207661_10012529 3300025944 Bacteria 6164
165 Ga0207661_10012596 3300025944 Bacteria 6153
166 Ga0207679_10133126 3300025945 Bacteria 1998
167 Ga0207667_10095818 3300025949 Bacteria 3063
168 Ga0207640_10128184 3300025981 Bacteria 1830
169 Ga0207677_10075039 3300026023 Bacteria 2402
170 Ga0207703_10105280 3300026035 Bacteria 2398
171 Ga0207639_10089482 3300026041 Bacteria 2460
172 Ga0207702_10084093 3300026078 Bacteria 2770
173 Ga0207702_10101034 3300026078 Bacteria 2546
174 Ga0207702_10431425 3300026078 Bacteria 1276
175 Ga0207674_10038836 3300026116 Bacteria 4939
176 Ga0207698_10011490 3300026142 Bacteria 5745
177 Ga0207698_10552225 3300026142 Bacteria 1129
178 Ga0207428_10002593 3300027907 Bacteria 18052
179 Ga0207428_10002644 3300027907 Bacteria 17855
180 Ga0207428_10104903 3300027907 Bacteria 2180
181 Ga0268264_10133941 3300028381 Bacteria 2201
182 Ga0265319_1021297 3300028563 Bacteria 2382
183 Ga0265338_10019853 3300028800 Bacteria 7102
184 Ga0265338_10078867 3300028800 Bacteria 2775
185 Ga0265332_10026660 3300031238 Bacteria 2534
186 Ga0265328_10009933 3300031239 Bacteria 3850
187 Ga0265328_10010205 3300031239 Bacteria 3789
188 Ga0265320_10010114 3300031240 Bacteria 5638
189 Ga0265329_10004753 3300031242 Bacteria 5591
190 Ga0265314_10000140 3300031711 Bacteria 108620
191 Ga0265314_10001333 3300031711 Bacteria 27988
192 Ga0307405_10026067 3300031731 Bacteria 3367
193 Ga0307410_10145622 3300031852 Bacteria 1758
194 Ga0307412_10451853 3300031911 Bacteria 1059
195 Ga0307409_100128445 3300031995 Bacteria 2161
196 Ga0307409_100266258 3300031995 Bacteria 1576
197 Ga0307416_100081228 3300032002 Bacteria 2740
198 Ga0307416_100165344 3300032002 Bacteria 2051
199 Ga0307414_10261154 3300032004 Bacteria 1445
200 Ga0307415_100014501 3300032126 Bacteria 4636
201 Ga0307415_100107821 3300032126 Bacteria 2059
202 Ga0307415_100384480 3300032126 Bacteria 1193
203 Ga0373926_0002422 3300035083 Bacteria 5911
204 Ga0373951_0020937 3300035091 Bacteria 1500
205 Ga0373932_0019509 3300035112 Bacteria 1768
206 Ga0373956_0005574 3300035119 Bacteria 5035
207 Ga0373946_0001888 3300035171 Bacteria 7316
208 Ga0373927_0000010 3300035695 Bacteria 183458
209 Ga0373927_0001104 3300035695 Bacteria 20517
210 Ga0373927_0003134 3300035695 Bacteria 11947
211 Ga0373947_0006442 3300035725 Bacteria 6819
212 Ga0373937_0040228 3300036401 Bacteria 4261
213 Ga0373925_0000172 3300037068 Bacteria 70000
214 Ga0373925_0140100 3300037068 Unclassified 1892
215 Ga0373925_0201227 3300037068 Bacteria 1584
216 Ga0395898_0256762 3300037466 Bacteria 1667
217 Ga0436364_1255801 3300037853 Bacteria 25543
218 Ga0395901_0384843 3300038443 Bacteria 1443
219 Ga0395901_0489868 3300038443 Bacteria 1253
220 Ga0451789_0437727 3300041443 Bacteria 3591
221 Ga0451791_0268023 3300041451 Bacteria 3583
222 Ga0451793_0310255 3300041452 Bacteria 1209
223 Ga0451797_0282428 3300041453 Bacteria 2298
224 Ga0451798_0746010 3300041458 Bacteria 2161
225 Ga0451841_0172323 3300041498 Bacteria 2678
226 Ga0451843_0141064 3300041509 Bacteria 1620
227 Ga0439443_003416 3300042003 Bacteria 1998
228 Ga0439456_012215 3300042013 Bacteria 1780
229 Ga0450915_000012 3300042119 Bacteria 3083
230 Ga0450888_004522 3300042126 Bacteria 1455
231 Ga0450902_015197 3300042137 Bacteria 1248
232 Ga0439444_0000699 3300042437 Bacteria 3958
233 Ga0439440_0001776 3300042993 Bacteria 3985
234 Ga0439440_0029500 3300042993 Bacteria 1287
235 Ga0466966_0003611 3300044684 Bacteria 10207
236 Ga0466966_0050650 3300044684 Bacteria 2641
237 Ga0466961_0031534 3300044693 Bacteria 3408
238 Ga0466961_0185934 3300044693 Bacteria 1289
239 Ga0466963_0025429 3300044694 Bacteria 3776
240 Ga0466963_0188936 3300044694 Bacteria 1439
241 Ga0453684_0292116 3300044712 Bacteria 1856
242 Ga0466971_0158981 3300044719 Bacteria 1057
243 Ga0466968_0079239 3300044735 Bacteria 1441
244 Ga0466957_0039866 3300044842 Bacteria 2835
245 Ga0466957_0278194 3300044842 Bacteria 1119
246 Ga0466960_0260775 3300044901 Bacteria 965
247 Ga0466959_0038482 3300045049 Bacteria 3535
248 Ga0466959_0042918 3300045049 Bacteria 3335
249 Ga0466959_0056735 3300045049 Bacteria 2857
250 Ga0451576_0035519 3300045051 Bacteria 5287
251 Ga0451576_0200055 3300045051 Bacteria 2087
252 Ga0466958_0108205 3300045836 Bacteria 1734
253 Ga0466967_0000130 3300045976 Bacteria 28758
254 Ga0466967_0017762 3300045976 Bacteria 5661
255 Ga0466967_0069419 3300045976 Bacteria 3149
256 Ga0495592_0000027 3300046454 Bacteria 132938
257 Ga0495629_0000001 3300046459 Bacteria 807972
258 Ga0495651_0059828 3300046462 Bacteria 2920
259 Ga0495580_0000898 3300046472 Bacteria 25906
260 Ga0495662_0013749 3300046476 Bacteria 3940
261 Ga0495664_0086398 3300046477 Bacteria 1884
262 Ga0495618_0008977 3300046514 Bacteria 6034
263 Ga0495628_0002714 3300046516 Bacteria 15852
264 Ga0495628_0140727 3300046516 Bacteria 1841
265 Ga0495630_0097522 3300046517 Bacteria 2223
266 Ga0495630_0124994 3300046517 Bacteria 1952
267 Ga0495630_0147312 3300046517 Bacteria 1790
268 Ga0495652_0079681 3300046529 Bacteria 2707
269 Ga0495640_0026639 3300046533 Bacteria 4175
270 Ga0495586_0005190 3300046535 Bacteria 6972
271 Ga0495586_0009285 3300046535 Bacteria 5230
272 Ga0495586_0087445 3300046535 Bacteria 1718
273 Ga0495645_0025069 3300046543 Bacteria 4328
274 Ga0495667_0113733 3300046559 Bacteria 1749
275 Ga0495634_0004234 3300046642 Bacteria 11323
276 Ga0495599_0057321 3300046678 Bacteria 2438
277 Ga0495658_0001249 3300046683 Bacteria 13349
278 Ga0495658_0051506 3300046683 Bacteria 2332
279 Ga0495613_0002536 3300046689 Bacteria 13752
280 Ga0495624_0069854 3300046690 Bacteria 2187
281 Ga0495680_0028333 3300047322 Bacteria 4593
282 Ga0495677_0114308 3300047445 Bacteria 1027
283 Ga0496102_0445516 3300048905 Unclassified 1215
284 Ga0496108_0023576 3300048911 Bacteria 5065
285 Ga0496108_0117826 3300048911 Bacteria 2276
286 Ga0496110_0051903 3300048913 Bacteria 3604
287 Ga0496111_0123698 3300048914 Bacteria 1912
288 Ga0501034_0053328 3300049571 Bacteria 4072
289 Ga0501040_0110088 3300049576 Bacteria 1926
290 Ga0501046_0046874 3300049580 Bacteria 3429
291 Ga0501048_0089127 3300049582 Bacteria 2176
292 Ga0501068_0097037 3300049584 Bacteria 1824
293 Ga0501071_0019189 3300049587 Bacteria 4745
294 Ga0501071_0280829 3300049587 Bacteria 1260
295 Ga0501072_0047070 3300049588 Bacteria 3396
296 Ga0501081_0052867 3300049743 Bacteria 2804
297 Ga0501083_0002827 3300049744 Bacteria 11994
298 Ga0501083_0030733 3300049744 Bacteria 3688
299 Ga0501083_0122606 3300049744 Bacteria 1704
300 nmdc:mga0yw44_111338_c1 3300050492 Bacteria 1754
301 nmdc:mga05p37_129683_c1 3300050507 Bacteria 3094
302 nmdc:mga05p37_136174_c1 3300050507 Bacteria 3012
303 nmdc:mga05p37_202447_c1 3300050507 Bacteria 2403
304 nmdc:mga05p37_26441_c1 3300050507 Bacteria 7060
305 nmdc:mga05p37_355151_c1 3300050507 Bacteria 1725
306 nmdc:mga05p37_413487_c1 3300050507 Bacteria 1572
307 nmdc:mga05p37_482789_c1 3300050507 Bacteria 1427
308 nmdc:mga09592_111091_c1 3300050508 Bacteria 2352
309 nmdc:mga09592_42266_c1 3300050508 Bacteria 3834
310 nmdc:mga0qj67_8117_c1 3300050509 Bacteria 7772
311 nmdc:mga0qj67_90120_c1 3300050509 Bacteria 2464
312 nmdc:mga06r32_52617_c1 3300050510 Bacteria 3900
313 nmdc:mga08y16_1643_c1 3300050511 Bacteria 22656
314 nmdc:mga08y16_179219_c1 3300050511 Bacteria 2200
315 nmdc:mga08y16_184576_c1 3300050511 Bacteria 2165
316 nmdc:mga08y16_76523_c1 3300050511 Bacteria 3488
317 nmdc:mga08y16_87589_c1 3300050511 Bacteria 3245
318 nmdc:mga0n895_260829_c1 3300050512 Bacteria 1759
319 nmdc:mga0n895_56688_c1 3300050512 Bacteria 3861
320 nmdc:mga0rr50_109774_c1 3300050513 Bacteria 2181
321 nmdc:mga0rr50_26064_c1 3300050513 Bacteria 4073
322 nmdc:mga08x19_698_c1 3300050514 Bacteria 21468
323 nmdc:mga08x19_72264_c1 3300050514 Bacteria 2250
324 nmdc:mga0a205_119806_c1 3300050515 Bacteria 2531
325 nmdc:mga0a205_34424_c1 3300050515 Bacteria 4860
326 Ga0500566_0005063 3300053094 Bacteria 7858
327 Ga0501084_0032684 3300054114 Bacteria 4353
328 Ga0530510_0034007 3300061734 Bacteria 3671
329 2919448009 2919446982 Bacteria 3994487
330 Ga0451576_0059386
331 JGI24735J21928_10028923
332 JGI25407J50210_10015406
333 Ga0058862_11747516
334 Ga0070683_100016113
335 Ga0070683_100017313
336 Ga0070690_100061288
337 Ga0070690_100234463
338 Ga0070680_100002768
339 Ga0070682_100006566
340 Ga0070660_100002814
341 Ga0070689_100016824
342 Ga0070689_100036438
343 Ga0070691_10150124
344 Ga0070661_100004671
345 Ga0070688_100242477
346 Ga0070659_100005303
347 Ga0070714_100225144
348 Ga0070713_100038335
349 Ga0070711_100015160
350 Ga0070705_100003964
351 Ga0070705_100074300
352 Ga0070694_100007513
353 Ga0070694_100020080
354 Ga0070681_10012012
355 Ga0070706_100007158
356 Ga0070706_100053385
357 Ga0070706_100090386
358 Ga0070707_100029045
359 Ga0070707_100112402
360 Ga0070698_100001691
361 Ga0070698_100015581
362 Ga0070698_100023991
363 Ga0070698_100039262
364 Ga0070699_100000487
365 Ga0070699_100001008
366 Ga0070699_100001682
367 Ga0070679_100000204
368 Ga0070679_100009949
369 Ga0070684_100004114
370 Ga0070697_100001902
371 Ga0068853_100026203
372 Ga0070686_100005843
373 Ga0070686_100117430
374 Ga0070686_100199916
375 Ga0070695_100039074
376 Ga0070695_100397563
377 Ga0070696_100000409
378 Ga0070696_100082067
379 Ga0070696_100186719
380 Ga0070704_100003260
381 Ga0070704_100014136
382 Ga0070704_100066546
383 Ga0068855_100082819
384 Ga0070664_100170438
385 Ga0068856_100009433
386 Ga0068856_100075292
387 Ga0068856_100383477
388 Ga0068852_100003295
389 Ga0068852_100667256
390 Ga0068859_100147486
391 Ga0068859_100222051
392 Ga0068859_100480002
393 Ga0068863_100050628
394 Ga0068863_100051744
395 Ga0068858_100131621
396 Ga0068860_100112981
397 Ga0081538_10003221
398 Ga0081538_10005106
399 Ga0081538_10005986
400 Ga0081538_10010369
401 Ga0081540_1037857
402 Ga0075365_10090890
403 Ga0075432_10000074
404 Ga0075432_10029552
405 Ga0075428_100002684
406 Ga0075428_100144556
407 Ga0075428_100571707
408 Ga0075430_100001895
409 Ga0075431_100109572
410 Ga0075433_10026864
411 Ga0075433_10029225
412 Ga0075433_10039053
413 Ga0075433_10100595
414 Ga0075433_10143208
415 Ga0075434_100005170
416 Ga0075434_100007252
417 Ga0075434_100015221
418 Ga0075434_100031679
419 Ga0075434_100037261
420 Ga0075434_100048241
421 Ga0075429_100218804
422 Ga0075436_100007749
423 Ga0075436_100020947
424 Ga0075436_100360659
425 Ga0097620_100147488
426 Ga0097620_100222051
427 Ga0097620_100479991
428 Ga0075435_100005287
429 Ga0075435_100014501
430 Ga0075435_100113635
431 Ga0099794_10040710
432 Ga0099794_10157652
433 Ga0099795_10002284
434 Ga0105240_10201640
435 Ga0111539_10003882
436 Ga0111539_10016545
437 Ga0111539_10086185
438 Ga0111539_10095196
439 Ga0111539_10096601
440 Ga0111539_10163439
441 Ga0105245_10024339
442 Ga0105245_10067174
443 Ga0105247_10049283
444 Ga0114129_10035836
445 Ga0114129_10040787
446 Ga0114129_10096052
447 Ga0114129_10209564
448 Ga0114129_10228768
449 Ga0114129_10674570
450 Ga0105237_10031160
451 Ga0105238_10003353
452 Ga0105238_10006427
453 Ga0105239_10023385
454 Ga0157370_10063785
455 Ga0157370_10511102
456 Ga0157369_10017515
457 Ga0157369_10040030
458 Ga0157369_10147576
459 Ga0157372_10080134
460 Ga0157372_10308169
461 Ga0157380_10153135
462 Ga0182008_10027788
463 Ga0206356_11143398
464 Ga0206353_10415169
465 Ga0206353_11390319
466 Ga0213875_10051158
467 Ga0207653_10011316
468 Ga0207710_10028428
469 Ga0207684_10007464
470 Ga0207684_10022636
471 Ga0207684_10053697
472 Ga0207707_10001494
473 Ga0207695_10027597
474 Ga0207671_10090392
475 Ga0207663_10011096
476 Ga0207660_10024752
477 Ga0207649_10004323
478 Ga0207652_10004433
479 Ga0207652_10009827
480 Ga0207646_10004882
481 Ga0207646_10397276
482 Ga0207694_10006436
483 Ga0207687_10036909
484 Ga0207687_10109209
485 Ga0207700_10018864
486 Ga0207664_10118113
487 Ga0207690_10007016
488 Ga0207709_10189724
489 Ga0207670_10004506
490 Ga0207670_10011169
491 Ga0207670_10128141
492 Ga0207704_10233765
493 Ga0207661_10012529
494 Ga0207661_10012596
495 Ga0207679_10133126
496 Ga0207667_10095818
497 Ga0207640_10128184
498 Ga0207677_10075039
499 Ga0207703_10105280
500 Ga0207639_10089482
501 Ga0207702_10084093
502 Ga0207702_10101034
503 Ga0207702_10431425
504 Ga0207674_10038836
505 Ga0207698_10011490
506 Ga0207698_10552225
507 Ga0207428_10002593
508 Ga0207428_10002644
509 Ga0207428_10104903
510 Ga0268264_10133941
511 Ga0265319_1021297
512 Ga0265338_10019853
513 Ga0265338_10078867
514 Ga0265332_10026660
515 Ga0265328_10009933
516 Ga0265328_10010205
517 Ga0265320_10010114
518 Ga0265329_10004753
519 Ga0265314_10000140
520 Ga0265314_10001333
521 Ga0307405_10026067
522 Ga0307410_10145622
523 Ga0307412_10451853
524 Ga0307409_100128445
525 Ga0307409_100266258
526 Ga0307416_100081228
527 Ga0307416_100165344
528 Ga0307414_10261154
529 Ga0307415_100014501
530 Ga0307415_100107821
531 Ga0307415_100384480
532 Ga0373926_0002422
533 Ga0373951_0020937
534 Ga0373932_0019509
535 Ga0373956_0005574
536 Ga0373946_0001888
537 Ga0373927_0000010
538 Ga0373927_0001104
539 Ga0373927_0003134
540 Ga0373947_0006442
541 Ga0373937_0040228
542 Ga0373925_0000172
543 Ga0373925_0140100
544 Ga0373925_0201227
545 Ga0395898_0256762
546 Ga0436364_1255801
547 Ga0395901_0384843
548 Ga0395901_0489868
549 Ga0451789_0437727
550 Ga0451791_0268023
551 Ga0451793_0310255
552 Ga0451797_0282428
553 Ga0451798_0746010
554 Ga0451841_0172323
555 Ga0451843_0141064
556 Ga0439443_003416
557 Ga0439456_012215
558 Ga0450915_000012
559 Ga0450888_004522
560 Ga0450902_015197
561 Ga0439444_0000699
562 Ga0439440_0001776
563 Ga0439440_0029500
564 Ga0466966_0003611
565 Ga0466966_0050650
566 Ga0466961_0031534
567 Ga0466961_0185934
568 Ga0466963_0025429
569 Ga0466963_0188936
570 Ga0453684_0292116
571 Ga0466971_0158981
572 Ga0466968_0079239
573 Ga0466957_0039866
574 Ga0466957_0278194
575 Ga0466960_0260775
576 Ga0466959_0038482
577 Ga0466959_0042918
578 Ga0466959_0056735
579 Ga0451576_0035519
580 Ga0451576_0200055
581 Ga0466958_0108205
582 Ga0466967_0000130
583 Ga0466967_0017762
584 Ga0466967_0069419
585 Ga0495592_0000027
586 Ga0495629_0000001
587 Ga0495651_0059828
588 Ga0495580_0000898
589 Ga0495662_0013749
590 Ga0495664_0086398
591 Ga0495618_0008977
592 Ga0495628_0002714
593 Ga0495628_0140727
594 Ga0495630_0097522
595 Ga0495630_0124994
596 Ga0495630_0147312
597 Ga0495652_0079681
598 Ga0495640_0026639
599 Ga0495586_0005190
600 Ga0495586_0009285
601 Ga0495586_0087445
602 Ga0495645_0025069
603 Ga0495667_0113733
604 Ga0495634_0004234
605 Ga0495599_0057321
606 Ga0495658_0001249
607 Ga0495658_0051506
608 Ga0495613_0002536
609 Ga0495624_0069854
610 Ga0495680_0028333
611 Ga0495677_0114308
612 Ga0496102_0445516
613 Ga0496108_0023576
614 Ga0496108_0117826
615 Ga0496110_0051903
616 Ga0496111_0123698
617 Ga0501034_0053328
618 Ga0501040_0110088
619 Ga0501046_0046874
620 Ga0501048_0089127
621 Ga0501068_0097037
622 Ga0501071_0019189
623 Ga0501071_0280829
624 Ga0501072_0047070
625 Ga0501081_0052867
626 Ga0501083_0002827
627 Ga0501083_0030733
628 Ga0501083_0122606
629 nmdc:mga0yw44_111338_c1
630 nmdc:mga05p37_129683_c1
631 nmdc:mga05p37_136174_c1
632 nmdc:mga05p37_202447_c1
633 nmdc:mga05p37_26441_c1
634 nmdc:mga05p37_355151_c1
635 nmdc:mga05p37_413487_c1
636 nmdc:mga05p37_482789_c1
637 nmdc:mga09592_111091_c1
638 nmdc:mga09592_42266_c1
639 nmdc:mga0qj67_8117_c1
640 nmdc:mga0qj67_90120_c1
641 nmdc:mga06r32_52617_c1
642 nmdc:mga08y16_1643_c1
643 nmdc:mga08y16_179219_c1
644 nmdc:mga08y16_184576_c1
645 nmdc:mga08y16_76523_c1
646 nmdc:mga08y16_87589_c1
647 nmdc:mga0n895_260829_c1
648 nmdc:mga0n895_56688_c1
649 nmdc:mga0rr50_109774_c1
650 nmdc:mga0rr50_26064_c1
651 nmdc:mga08x19_698_c1
652 nmdc:mga08x19_72264_c1
653 nmdc:mga0a205_119806_c1
654 nmdc:mga0a205_34424_c1
655 Ga0500566_0005063
656 Ga0501084_0032684
657 Ga0530510_0034007
658 2919448009

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01740

STAS

STAS domain

205

305

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.9569 177 290
6qcm-assembly1.cif.gz_d cryo em structure of the listeria stressosome 0.9293 177 292
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.9253 177 290
6qcm-assembly1.cif.gz_I cryo em structure of the listeria stressosome 0.9139 177 292
6qcm-assembly1.cif.gz_d cryo em structure of the listeria stressosome 0.8998 177 292
ID Description Score Start End Superfamily
af_A0A0N7KGR6_2_88_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.9084 217 292 3.30.750.24
af_I1KA21_504_648_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8943 183 289 3.30.750.24
3if5A02 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.882 178 253 3.30.750.24
af_Q55FJ8_836_995_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8785 181 287 3.30.750.24
af_Q55FK8_548_696_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.876 183 289 3.30.750.24
ID Description Score Start End GO Terms
AF-M5RI08-F1-model_v4 deleted 0.9619 177 292
AF-A0A7Z0V3A2-F1-model_v4 deleted 0.9601 184 297
AF-A0A2V9A0D3-F1-model_v4 Histidine kinase 0.9544 166 292 GO:0016301
AF-A0A6J4IML5-F1-model_v4 RsbS, negative regulator of sigma-B 0.9492 178 292
AF-A0A534BMG5-F1-model_v4 Anti-anti-sigma factor 0.9449 25 163

Map