F409786

General Info

Members Datasets Scaffolds Average Seq Length
329 219 658 435

Family's Representative Sequence

Representative Sequence 3300044842|Ga0466957_0102679|Ga0466957_0102679_232_1587
Length 451
Sequence LTNEEVEMTTLEVRAPAHEGHRTVFVDSFTNGVLGPSQAMLGPVADGGYIVVNTAPGCWGPMITPRLRGGHEVARPVAVAGAAPGDAIAIRIKDIVVTSMATASGNDYFVEGRFNGDPYCAKQCAECGTPYPETHLDGIGQDAVRCDTCGADATPFKFTNGYTIAFDEGRRLGVTLQQAAAEEIAADAERFAALPENSVQHPILAFAPHDLVGVVARLRPFMGQLGTSPSIDMPDSHNAGDFGSFLVGAPHDFALTADELVRHKTDGHLDVEAVRAGAILICPVKLPGGGVYLGDMHALQGDGEIAGHTCDVSGTVTLQVEVIKGGLGIDGPVLLPLEEDLPYLAKPLSEQERMRARQLAARWGLADVERSAPISVIGTGPDLNTATDNGLERAATLLGTTVPEVKNRATISGGIRIGRHPGVVQVTFRAPMDALERRGLAGFAREQYGAV

Samples

Sample ID Description Type Environment
1 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
45 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
83 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
84 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
85 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
96 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
100 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
109 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
110 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
113 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
127 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
154 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
155 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
156 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
157 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
174 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
175 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
176 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
177 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
178 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
179 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
180 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
181 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
182 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
183 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
186 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
187 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
188 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
189 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
190 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
194 2643221557 Ensifer sp. Root558 Isolate Unclassified
195 2643221610 Ensifer sp. Root74 Isolate Unclassified
196 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
197 2643221668 Ensifer sp. Root423 Isolate Unclassified
198 2643221675 Ensifer sp. Root1298 Isolate Unclassified
199 2643221680 Ensifer sp. Root1312 Isolate Unclassified
200 2643221726 Ensifer sp. Root954 Isolate Unclassified
201 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
202 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
203 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
204 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
205 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
206 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
207 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
208 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
209 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
210 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
211 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
212 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
213 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
214 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
215 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
216 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
217 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
218 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
219 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.67
Metatranscriptomes 2.43
Isolates 7.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.65
Nodule 2.43
Rhizoplane 5.17
Rhizosphere 76.9
Stem 0
Stem Tuber 0
Unclassified 3.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466957_0102679 3300044842 Bacteria 1804
2 JGI25406J46586_10005130 3300003203 Bacteria 6076
3 JGI25407J50210_10011590 3300003373 Bacteria 2254
4 Ga0055538_1000474 3300003751 Bacteria 14811
5 Ga0055524_1004219 3300003775 Bacteria 6689
6 Ga0058861_10174613 3300004800 Unclassified 1860
7 Ga0070658_10002440 3300005327 Bacteria 15561
8 Ga0070680_100055064 3300005336 Unclassified 3250
9 Ga0068868_100068627 3300005338 Bacteria 2823
10 Ga0070691_10096304 3300005341 Bacteria 1465
11 Ga0070668_100007506 3300005347 Bacteria 8095
12 Ga0070688_100018659 3300005365 Bacteria 4006
13 Ga0070659_100118989 3300005366 Bacteria 2138
14 Ga0070711_100186491 3300005439 Bacteria 1591
15 Ga0070700_100120700 3300005441 Bacteria 1756
16 Ga0070662_100001985 3300005457 Bacteria 12549
17 Ga0070681_10009867 3300005458 Bacteria 9408
18 Ga0070679_100028606 3300005530 Bacteria 5496
19 Ga0070696_100069570 3300005546 Bacteria 2474
20 Ga0068854_100019230 3300005578 Bacteria 4599
21 Ga0068854_100129449 3300005578 Bacteria 1925
22 Ga0070702_100015724 3300005615 Bacteria 3869
23 Ga0068861_100003573 3300005719 Bacteria 10345
24 Ga0068861_100094797 3300005719 Bacteria 2362
25 Ga0068870_10028608 3300005840 Bacteria 2800
26 Ga0081455_10006483 3300005937 Bacteria 12547
27 Ga0081455_10053455 3300005937 Unclassified 3450
28 Ga0081455_10083650 3300005937 Bacteria 2607
29 Ga0081538_10000096 3300005981 Bacteria 85350
30 Ga0081538_10000224 3300005981 Bacteria 63610
31 Ga0081538_10000382 3300005981 Bacteria 50422
32 Ga0081538_10001064 3300005981 Bacteria 29231
33 Ga0081538_10003010 3300005981 Bacteria 16048
34 Ga0081538_10003564 3300005981 Bacteria 14644
35 Ga0081538_10004443 3300005981 Bacteria 12929
36 Ga0081538_10005737 3300005981 Bacteria 11094
37 Ga0081538_10006231 3300005981 Bacteria 10553
38 Ga0081538_10014273 3300005981 Bacteria 6227
39 Ga0081538_10045612 3300005981 Bacteria 2714
40 Ga0081538_10055808 3300005981 Bacteria 2321
41 Ga0081540_1059334 3300005983 Bacteria 1837
42 Ga0081539_10005206 3300005985 Bacteria 13484
43 Ga0075428_100124519 3300006844 Bacteria 2805
44 Ga0075430_100070115 3300006846 Bacteria 2940
45 Ga0068865_100175168 3300006881 Bacteria 1648
46 Ga0111539_10047117 3300009094 Bacteria 5154
47 Ga0105245_10033494 3300009098 Bacteria 4555
48 Ga0105245_10082982 3300009098 Bacteria 2932
49 Ga0105247_10099940 3300009101 Bacteria 1854
50 Ga0114129_10003599 3300009147 Bacteria 21790
51 Ga0114129_10550229 3300009147 Unclassified 1501
52 Ga0105243_10016735 3300009148 Bacteria 5543
53 Ga0105243_10106872 3300009148 Bacteria 2333
54 Ga0105249_10003876 3300009553 Bacteria 12917
55 Ga0099796_10029724 3300010159 Bacteria 1766
56 Ga0105239_10044466 3300010375 Bacteria 4868
57 Ga0105239_10178235 3300010375 Bacteria 2377
58 Ga0105239_10238414 3300010375 Bacteria 2041
59 Ga0105246_10085623 3300011119 Bacteria 2257
60 Ga0157374_10011647 3300013296 Bacteria 7625
61 Ga0157378_10008732 3300013297 Bacteria 8819
62 Ga0163162_10036659 3300013306 Bacteria 4890
63 Ga0206349_1339212 3300020075 Bacteria 1626
64 Ga0206355_1489002 3300020076 Bacteria 1676
65 Ga0206350_10921220 3300020080 Bacteria 1479
66 Ga0206350_11258927 3300020080 Bacteria 1679
67 Ga0213876_10019682 3300021384 Bacteria 3565
68 Ga0213876_10048776 3300021384 Bacteria 2236
69 Ga0213876_10103345 3300021384 Bacteria 1511
70 Ga0213875_10002179 3300021388 Bacteria 11956
71 Ga0213875_10004629 3300021388 Bacteria 7502
72 Ga0213875_10043257 3300021388 Archaea 2115
73 Ga0209784_100168 3300025224 Bacteria 56545
74 Ga0209147_100042 3300025229 Bacteria 301263
75 Ga0209676_1000690 3300025292 Bacteria 47584
76 Ga0209025_1001335 3300025294 Bacteria 33271
77 Ga0209025_1003009 3300025294 Bacteria 16665
78 Ga0209025_1035701 3300025294 Bacteria 2241
79 Ga0209256_1000408 3300025299 Bacteria 67949
80 Ga0209051_1005536 3300025303 Bacteria 7356
81 Ga0207688_10006027 3300025901 Bacteria 6596
82 Ga0207688_10007034 3300025901 Bacteria 6119
83 Ga0207685_10052131 3300025905 Bacteria 1584
84 Ga0207705_10005648 3300025909 Bacteria 9340
85 Ga0207707_10016962 3300025912 Bacteria 6345
86 Ga0207671_10167963 3300025914 Bacteria 1702
87 Ga0207663_10101802 3300025916 Bacteria 1931
88 Ga0207660_10036491 3300025917 Unclassified 3418
89 Ga0207662_10049783 3300025918 Bacteria 2487
90 Ga0207657_10072731 3300025919 Bacteria 2907
91 Ga0207652_10046657 3300025921 Unclassified 3698
92 Ga0207681_10172131 3300025923 Bacteria 1642
93 Ga0207687_10101334 3300025927 Bacteria 2120
94 Ga0207664_10176222 3300025929 Bacteria 1833
95 Ga0207706_10004949 3300025933 Bacteria 12449
96 Ga0207706_10055790 3300025933 Bacteria 3483
97 Ga0207706_10086291 3300025933 Bacteria 2759
98 Ga0207709_10023663 3300025935 Bacteria 3498
99 Ga0207661_10149350 3300025944 Bacteria 2019
100 Ga0207712_10122169 3300025961 Bacteria 1972
101 Ga0207640_10051422 3300025981 Bacteria 2678
102 Ga0207677_10089171 3300026023 Bacteria 2238
103 Ga0207703_10182935 3300026035 Bacteria 1850
104 Ga0207639_10156852 3300026041 Bacteria 1913
105 Ga0207678_10066727 3300026067 Bacteria 3089
106 Ga0207708_10047140 3300026075 Bacteria 3282
107 Ga0207648_10030774 3300026089 Bacteria 4750
108 Ga0207676_10104841 3300026095 Bacteria 2353
109 Ga0207675_100003420 3300026118 Bacteria 15498
110 Ga0207675_100013258 3300026118 Bacteria 7694
111 Ga0207698_10020107 3300026142 Bacteria 4589
112 Ga0207698_10067262 3300026142 Bacteria 2825
113 Ga0207698_10216590 3300026142 Bacteria 1727
114 Ga0268264_10027702 3300028381 Bacteria 4632
115 Ga0316575_10005310 3300031665 Bacteria 4589
116 Ga0316576_10001438 3300031727 Bacteria 12763
117 Ga0316576_10010957 3300031727 Bacteria 5913
118 Ga0316576_10014103 3300031727 Bacteria 5330
119 Ga0316576_10112245 3300031727 Unclassified 2043
120 Ga0316578_10003306 3300031728 Bacteria 7342
121 Ga0316578_10007623 3300031728 Bacteria 5442
122 Ga0316578_10012986 3300031728 Bacteria 4403
123 Ga0316578_10088312 3300031728 Bacteria 1850
124 Ga0316577_10037504 3300031733 Unclassified 2710
125 Ga0316577_10068917 3300031733 Bacteria 1976
126 Ga0307410_10119082 3300031852 Bacteria 1922
127 Ga0307406_10100187 3300031901 Bacteria 1971
128 Ga0307406_10150946 3300031901 Bacteria 1657
129 Ga0307407_10007340 3300031903 Bacteria 4985
130 Ga0307407_10032252 3300031903 Bacteria 2846
131 Ga0307407_10077274 3300031903 Bacteria 2002
132 Ga0307412_10160431 3300031911 Bacteria 1670
133 Ga0307409_100006904 3300031995 Bacteria 6732
134 Ga0307409_100015177 3300031995 Bacteria 5043
135 Ga0307416_100011995 3300032002 Bacteria 5814
136 Ga0307416_100049377 3300032002 Bacteria 3345
137 Ga0307414_10133971 3300032004 Bacteria 1928
138 Ga0307411_10050002 3300032005 Bacteria 2720
139 Ga0307415_100000226 3300032126 Bacteria 24896
140 Ga0316583_10025695 3300032133 Bacteria 2103
141 Ga0316588_1020628 3300033528 Bacteria 1493
142 Ga0316596_1004979 3300033541 Bacteria 3012
143 Ga0316596_1010794 3300033541 Unclassified 2220
144 Ga0316574_0001908 3300035398 Bacteria 10215
145 Ga0316574_0002297 3300035398 Bacteria 9520
146 Ga0316574_0006771 3300035398 Bacteria 6226
147 Ga0316574_0015789 3300035398 Unclassified 4386
148 Ga0316582_0065219 3300036647 Bacteria 2344
149 Ga0316582_0073815 3300036647 Bacteria 2214
150 Ga0316584_0002101 3300036712 Bacteria 12468
151 Ga0316584_0021788 3300036712 Bacteria 4663
152 Ga0316584_0130100 3300036712 Bacteria 1880
153 Ga0395899_0134889 3300037312 Bacteria 1760
154 Ga0395900_0032075 3300037418 Bacteria 5401
155 Ga0395898_0003985 3300037466 Bacteria 16255
156 Ga0395898_0105988 3300037466 Bacteria 2696
157 Ga0316581_0004073 3300037588 Bacteria 3695
158 Ga0436364_0282082 3300037853 Bacteria 13841
159 Ga0436364_0479269 3300037853 Bacteria 8357
160 Ga0436364_0527355 3300037853 Bacteria 148076
161 Ga0436364_1260739 3300037853 Bacteria 17238
162 Ga0395901_0042918 3300038443 Bacteria 4690
163 Ga0436365_0559747 3300039437 Bacteria 13053
164 Ga0436365_0701105 3300039437 Bacteria 1804
165 Ga0436365_0813952 3300039437 Bacteria 18562
166 Ga0436365_0999809 3300039437 Bacteria 2463
167 Ga0436365_1847615 3300039437 Bacteria 3025
168 Ga0436365_1895631 3300039437 Bacteria 9539
169 Ga0436363_1478923 3300039450 Bacteria 2123
170 Ga0436362_0831298 3300039453 Bacteria 2713
171 Ga0439440_0011547 3300042993 Bacteria 1864
172 Ga0466961_0100166 3300044693 Bacteria 1826
173 Ga0466971_0058526 3300044719 Bacteria 1739
174 Ga0466960_0007673 3300044901 Bacteria 4393
175 Ga0466960_0023958 3300044901 Bacteria 2748
176 Ga0466959_0039301 3300045049 Bacteria 3496
177 Ga0466959_0197355 3300045049 Bacteria 1402
178 Ga0466967_0000490 3300045976 Bacteria 19257
179 Ga0466967_0029765 3300045976 Bacteria 4575
180 Ga0466967_0035393 3300045976 Bacteria 4251
181 Ga0466967_0061597 3300045976 Bacteria 3329
182 Ga0466967_0137495 3300045976 Bacteria 2273
183 Ga0495592_0040997 3300046454 Bacteria 3471
184 Ga0495651_0020541 3300046462 Bacteria 5128
185 Ga0495653_0009586 3300046463 Bacteria 7921
186 Ga0495584_0064568 3300046491 Unclassified 1841
187 Ga0495608_0042288 3300046511 Bacteria 3047
188 Ga0495618_0065353 3300046514 Bacteria 2312
189 Ga0495618_0136747 3300046514 Bacteria 1567
190 Ga0495628_0005285 3300046516 Bacteria 11322
191 Ga0495628_0134496 3300046516 Bacteria 1890
192 Ga0495630_0010414 3300046517 Bacteria 6714
193 Ga0495652_0003699 3300046529 Bacteria 14966
194 Ga0495640_0028760 3300046533 Unclassified 3998
195 Ga0495640_0076571 3300046533 Bacteria 2232
196 Ga0495587_0008100 3300046536 Bacteria 6776
197 Ga0495598_0027925 3300046537 Bacteria 1561
198 Ga0495667_0018308 3300046559 Bacteria 4732
199 Ga0495634_0044769 3300046642 Bacteria 2994
200 Ga0495635_0029159 3300046663 Bacteria 3837
201 Ga0495657_0121890 3300046675 Bacteria 1641
202 Ga0495599_0089988 3300046678 Bacteria 1915
203 Ga0495600_0013566 3300046809 Bacteria 5123
204 Ga0495581_0126048 3300047315 Bacteria 1491
205 Ga0495604_0002193 3300047317 Bacteria 15639
206 Ga0495674_0016330 3300047319 Bacteria 6922
207 Ga0495680_0021870 3300047322 Bacteria 5344
208 Ga0495680_0023020 3300047322 Bacteria 5185
209 Ga0495675_0000377 3300047444 Bacteria 30854
210 Ga0495675_0004775 3300047444 Bacteria 8234
211 Ga0495684_0057720 3300047471 Bacteria 2958
212 Ga0495602_0025219 3300048088 Bacteria 5755
213 Ga0496101_0005283 3300048904 Bacteria 8223
214 Ga0496102_0114018 3300048905 Bacteria 2522
215 Ga0496103_0035657 3300048906 Bacteria 3046
216 Ga0496105_0140976 3300048908 Bacteria 1984
217 Ga0496107_0046799 3300048910 Bacteria 3113
218 Ga0496108_0061935 3300048911 Bacteria 3150
219 Ga0496108_0096926 3300048911 Bacteria 2513
220 Ga0496109_0197425 3300048912 Bacteria 1892
221 Ga0496109_0301667 3300048912 Bacteria 1510
222 Ga0496110_0023387 3300048913 Bacteria 5254
223 Ga0496110_0158237 3300048913 Bacteria 2053
224 Ga0496110_0420788 3300048913 Bacteria 1218
225 Ga0496111_0148671 3300048914 Bacteria 1737
226 Ga0496112_0347837 3300048915 Bacteria 1425
227 Ga0496114_0025853 3300048917 Bacteria 4802
228 Ga0496114_0242384 3300048917 Bacteria 1586
229 Ga0496115_0137704 3300048918 Bacteria 2013
230 Ga0496116_0001693 3300048919 Bacteria 24141
231 Ga0496121_0001176 3300048924 Bacteria 45820
232 Ga0496122_0009410 3300048925 Bacteria 10304
233 Ga0496122_0010332 3300048925 Bacteria 9649
234 Ga0496123_0069448 3300048926 Bacteria 2212
235 Ga0496124_0019266 3300048927 Bacteria 6359
236 Ga0496124_0019936 3300048927 Bacteria 6218
237 Ga0496125_0001213 3300048928 Bacteria 38770
238 Ga0501031_0068574 3300049568 Bacteria 2310
239 Ga0501031_0157197 3300049568 Bacteria 1486
240 Ga0501032_0062931 3300049569 Bacteria 2485
241 Ga0501033_0022653 3300049570 Bacteria 4738
242 Ga0501036_0124688 3300049572 Bacteria 2175
243 Ga0501037_0050798 3300049573 Bacteria 3034
244 Ga0501037_0156235 3300049573 Bacteria 1628
245 Ga0501038_0192900 3300049574 Bacteria 1638
246 Ga0501039_0012065 3300049575 Bacteria 6588
247 Ga0501039_0270435 3300049575 Bacteria 1336
248 Ga0501040_0006884 3300049576 Bacteria 7363
249 Ga0501040_0027206 3300049576 Bacteria 3849
250 Ga0501040_0154280 3300049576 Bacteria 1621
251 Ga0501041_0061912 3300049577 Bacteria 2291
252 Ga0501041_0097227 3300049577 Bacteria 1820
253 Ga0501042_0037583 3300049578 Bacteria 3436
254 Ga0501046_0077613 3300049580 Bacteria 2571
255 Ga0501046_0169997 3300049580 Bacteria 1637
256 Ga0501047_0036028 3300049581 Bacteria 4781
257 Ga0501047_0244935 3300049581 Bacteria 1642
258 Ga0501048_0026924 3300049582 Bacteria 4184
259 Ga0501048_0028388 3300049582 Bacteria 4060
260 Ga0501048_0130168 3300049582 Bacteria 1779
261 Ga0501070_0026795 3300049586 Bacteria 4834
262 Ga0501070_0067803 3300049586 Bacteria 2955
263 Ga0501070_0126107 3300049586 Bacteria 2115
264 Ga0501071_0036435 3300049587 Bacteria 3509
265 Ga0501071_0049772 3300049587 Bacteria 3017
266 Ga0501071_0145288 3300049587 Bacteria 1768
267 Ga0501072_0064997 3300049588 Bacteria 2876
268 Ga0501072_0110466 3300049588 Bacteria 2188
269 Ga0501072_0137314 3300049588 Bacteria 1949
270 Ga0501072_0150327 3300049588 Bacteria 1856
271 Ga0501073_0097936 3300049589 Bacteria 2037
272 Ga0501073_0210291 3300049589 Bacteria 1344
273 Ga0501074_0019478 3300049590 Bacteria 4928
274 Ga0501074_0142111 3300049590 Bacteria 1717
275 Ga0501075_0075048 3300049591 Bacteria 2557
276 Ga0501076_0007487 3300049592 Bacteria 7948
277 Ga0501076_0043400 3300049592 Bacteria 3543
278 Ga0501076_0051385 3300049592 Bacteria 3263
279 Ga0501076_0201731 3300049592 Bacteria 1624
280 Ga0501077_0111006 3300049593 Bacteria 1738
281 Ga0501079_0033177 3300049741 Bacteria 3971
282 Ga0501079_0235789 3300049741 Bacteria 1429
283 Ga0501080_0024953 3300049742 Bacteria 5545
284 Ga0501080_0213727 3300049742 Bacteria 1767
285 Ga0501081_0053380 3300049743 Bacteria 2791
286 Ga0501081_0073862 3300049743 Bacteria 2378
287 Ga0501083_0052339 3300049744 Bacteria 2743
288 Ga0501044_0047978 3300049823 Bacteria 4415
289 Ga0501045_0016353 3300049824 Bacteria 5268
290 Ga0501045_0056811 3300049824 Bacteria 2863
291 nmdc:mga09592_366928_c1 3300050508 Bacteria 1245
292 nmdc:mga0qj67_38135_c1 3300050509 Bacteria 3769
293 nmdc:mga08y16_85712_c1 3300050511 Bacteria 3283
294 nmdc:mga08y16_89768_c1 3300050511 Bacteria 3202
295 Ga0500620_013364 3300053155 Bacteria 2263
296 Ga0500627_0014340 3300053158 Bacteria 3034
297 Ga0501084_0035488 3300054114 Bacteria 4168
298 Ga0501084_0059820 3300054114 Bacteria 3190
299 Ga0466962_0033470 3300061719 Bacteria 2459
300 Ga0466962_0036804 3300061719 Bacteria 2343
301 Ga0530510_0019191 3300061734 Bacteria 4850
302 Ga0530510_0061277 3300061734 Bacteria 2724
303 Ga0530510_0179573 3300061734 Bacteria 1569
304 2643809236 2643221557 Bacteria 7184309
305 2644064362 2643221610 Bacteria 7480339
306 2644241281 2643221643 Bacteria 5749658
307 2644378830 2643221668 Bacteria 7306521
308 2644416194 2643221675 Bacteria 7473456
309 2644449234 2643221680 Bacteria 7473610
310 2644688458 2643221726 Bacteria 7455827
311 2791211522 2788500588 Bacteria 4584915
312 2819628806 2818991451 Bacteria 4697364
313 2854684721 2854681122 Bacteria 4548679
314 2857609832 2857609550 Bacteria 3753890
315 2865002106 2864997549 Bacteria 5139696
316 2904610708 2904606771 Bacteria 4684500
317 2921261835 2921257292 Bacteria 6808382
318 2937029670 2937023124 Bacteria 6815156
319 2939596584 2939593269 Bacteria 4798695
320 2941503408 2941499720 Bacteria 7599444
321 2957398718 2957395598 Bacteria 6822399
322 2957409512 2957408893 Bacteria 6558585
323 2964619105 2964615318 Bacteria 6809089
324 2967760252 2967755722 Bacteria 6814706
325 2970109200 2970102677 Bacteria 6812532
326 2977571401 2977565890 Bacteria 6901543
327 8001850536 8001845381 Bacteria 5804942
328 8005546191 8005542996 Bacteria 7077758
329 8055531989 8055531788 Bacteria 5249694
330 Ga0466957_0102679
331 JGI25406J46586_10005130
332 JGI25407J50210_10011590
333 Ga0055538_1000474
334 Ga0055524_1004219
335 Ga0058861_10174613
336 Ga0070658_10002440
337 Ga0070680_100055064
338 Ga0068868_100068627
339 Ga0070691_10096304
340 Ga0070668_100007506
341 Ga0070688_100018659
342 Ga0070659_100118989
343 Ga0070711_100186491
344 Ga0070700_100120700
345 Ga0070662_100001985
346 Ga0070681_10009867
347 Ga0070679_100028606
348 Ga0070696_100069570
349 Ga0068854_100019230
350 Ga0068854_100129449
351 Ga0070702_100015724
352 Ga0068861_100003573
353 Ga0068861_100094797
354 Ga0068870_10028608
355 Ga0081455_10006483
356 Ga0081455_10053455
357 Ga0081455_10083650
358 Ga0081538_10000096
359 Ga0081538_10000224
360 Ga0081538_10000382
361 Ga0081538_10001064
362 Ga0081538_10003010
363 Ga0081538_10003564
364 Ga0081538_10004443
365 Ga0081538_10005737
366 Ga0081538_10006231
367 Ga0081538_10014273
368 Ga0081538_10045612
369 Ga0081538_10055808
370 Ga0081540_1059334
371 Ga0081539_10005206
372 Ga0075428_100124519
373 Ga0075430_100070115
374 Ga0068865_100175168
375 Ga0111539_10047117
376 Ga0105245_10033494
377 Ga0105245_10082982
378 Ga0105247_10099940
379 Ga0114129_10003599
380 Ga0114129_10550229
381 Ga0105243_10016735
382 Ga0105243_10106872
383 Ga0105249_10003876
384 Ga0099796_10029724
385 Ga0105239_10044466
386 Ga0105239_10178235
387 Ga0105239_10238414
388 Ga0105246_10085623
389 Ga0157374_10011647
390 Ga0157378_10008732
391 Ga0163162_10036659
392 Ga0206349_1339212
393 Ga0206355_1489002
394 Ga0206350_10921220
395 Ga0206350_11258927
396 Ga0213876_10019682
397 Ga0213876_10048776
398 Ga0213876_10103345
399 Ga0213875_10002179
400 Ga0213875_10004629
401 Ga0213875_10043257
402 Ga0209784_100168
403 Ga0209147_100042
404 Ga0209676_1000690
405 Ga0209025_1001335
406 Ga0209025_1003009
407 Ga0209025_1035701
408 Ga0209256_1000408
409 Ga0209051_1005536
410 Ga0207688_10006027
411 Ga0207688_10007034
412 Ga0207685_10052131
413 Ga0207705_10005648
414 Ga0207707_10016962
415 Ga0207671_10167963
416 Ga0207663_10101802
417 Ga0207660_10036491
418 Ga0207662_10049783
419 Ga0207657_10072731
420 Ga0207652_10046657
421 Ga0207681_10172131
422 Ga0207687_10101334
423 Ga0207664_10176222
424 Ga0207706_10004949
425 Ga0207706_10055790
426 Ga0207706_10086291
427 Ga0207709_10023663
428 Ga0207661_10149350
429 Ga0207712_10122169
430 Ga0207640_10051422
431 Ga0207677_10089171
432 Ga0207703_10182935
433 Ga0207639_10156852
434 Ga0207678_10066727
435 Ga0207708_10047140
436 Ga0207648_10030774
437 Ga0207676_10104841
438 Ga0207675_100003420
439 Ga0207675_100013258
440 Ga0207698_10020107
441 Ga0207698_10067262
442 Ga0207698_10216590
443 Ga0268264_10027702
444 Ga0316575_10005310
445 Ga0316576_10001438
446 Ga0316576_10010957
447 Ga0316576_10014103
448 Ga0316576_10112245
449 Ga0316578_10003306
450 Ga0316578_10007623
451 Ga0316578_10012986
452 Ga0316578_10088312
453 Ga0316577_10037504
454 Ga0316577_10068917
455 Ga0307410_10119082
456 Ga0307406_10100187
457 Ga0307406_10150946
458 Ga0307407_10007340
459 Ga0307407_10032252
460 Ga0307407_10077274
461 Ga0307412_10160431
462 Ga0307409_100006904
463 Ga0307409_100015177
464 Ga0307416_100011995
465 Ga0307416_100049377
466 Ga0307414_10133971
467 Ga0307411_10050002
468 Ga0307415_100000226
469 Ga0316583_10025695
470 Ga0316588_1020628
471 Ga0316596_1004979
472 Ga0316596_1010794
473 Ga0316574_0001908
474 Ga0316574_0002297
475 Ga0316574_0006771
476 Ga0316574_0015789
477 Ga0316582_0065219
478 Ga0316582_0073815
479 Ga0316584_0002101
480 Ga0316584_0021788
481 Ga0316584_0130100
482 Ga0395899_0134889
483 Ga0395900_0032075
484 Ga0395898_0003985
485 Ga0395898_0105988
486 Ga0316581_0004073
487 Ga0436364_0282082
488 Ga0436364_0479269
489 Ga0436364_0527355
490 Ga0436364_1260739
491 Ga0395901_0042918
492 Ga0436365_0559747
493 Ga0436365_0701105
494 Ga0436365_0813952
495 Ga0436365_0999809
496 Ga0436365_1847615
497 Ga0436365_1895631
498 Ga0436363_1478923
499 Ga0436362_0831298
500 Ga0439440_0011547
501 Ga0466961_0100166
502 Ga0466971_0058526
503 Ga0466960_0007673
504 Ga0466960_0023958
505 Ga0466959_0039301
506 Ga0466959_0197355
507 Ga0466967_0000490
508 Ga0466967_0029765
509 Ga0466967_0035393
510 Ga0466967_0061597
511 Ga0466967_0137495
512 Ga0495592_0040997
513 Ga0495651_0020541
514 Ga0495653_0009586
515 Ga0495584_0064568
516 Ga0495608_0042288
517 Ga0495618_0065353
518 Ga0495618_0136747
519 Ga0495628_0005285
520 Ga0495628_0134496
521 Ga0495630_0010414
522 Ga0495652_0003699
523 Ga0495640_0028760
524 Ga0495640_0076571
525 Ga0495587_0008100
526 Ga0495598_0027925
527 Ga0495667_0018308
528 Ga0495634_0044769
529 Ga0495635_0029159
530 Ga0495657_0121890
531 Ga0495599_0089988
532 Ga0495600_0013566
533 Ga0495581_0126048
534 Ga0495604_0002193
535 Ga0495674_0016330
536 Ga0495680_0021870
537 Ga0495680_0023020
538 Ga0495675_0000377
539 Ga0495675_0004775
540 Ga0495684_0057720
541 Ga0495602_0025219
542 Ga0496101_0005283
543 Ga0496102_0114018
544 Ga0496103_0035657
545 Ga0496105_0140976
546 Ga0496107_0046799
547 Ga0496108_0061935
548 Ga0496108_0096926
549 Ga0496109_0197425
550 Ga0496109_0301667
551 Ga0496110_0023387
552 Ga0496110_0158237
553 Ga0496110_0420788
554 Ga0496111_0148671
555 Ga0496112_0347837
556 Ga0496114_0025853
557 Ga0496114_0242384
558 Ga0496115_0137704
559 Ga0496116_0001693
560 Ga0496121_0001176
561 Ga0496122_0009410
562 Ga0496122_0010332
563 Ga0496123_0069448
564 Ga0496124_0019266
565 Ga0496124_0019936
566 Ga0496125_0001213
567 Ga0501031_0068574
568 Ga0501031_0157197
569 Ga0501032_0062931
570 Ga0501033_0022653
571 Ga0501036_0124688
572 Ga0501037_0050798
573 Ga0501037_0156235
574 Ga0501038_0192900
575 Ga0501039_0012065
576 Ga0501039_0270435
577 Ga0501040_0006884
578 Ga0501040_0027206
579 Ga0501040_0154280
580 Ga0501041_0061912
581 Ga0501041_0097227
582 Ga0501042_0037583
583 Ga0501046_0077613
584 Ga0501046_0169997
585 Ga0501047_0036028
586 Ga0501047_0244935
587 Ga0501048_0026924
588 Ga0501048_0028388
589 Ga0501048_0130168
590 Ga0501070_0026795
591 Ga0501070_0067803
592 Ga0501070_0126107
593 Ga0501071_0036435
594 Ga0501071_0049772
595 Ga0501071_0145288
596 Ga0501072_0064997
597 Ga0501072_0110466
598 Ga0501072_0137314
599 Ga0501072_0150327
600 Ga0501073_0097936
601 Ga0501073_0210291
602 Ga0501074_0019478
603 Ga0501074_0142111
604 Ga0501075_0075048
605 Ga0501076_0007487
606 Ga0501076_0043400
607 Ga0501076_0051385
608 Ga0501076_0201731
609 Ga0501077_0111006
610 Ga0501079_0033177
611 Ga0501079_0235789
612 Ga0501080_0024953
613 Ga0501080_0213727
614 Ga0501081_0053380
615 Ga0501081_0073862
616 Ga0501083_0052339
617 Ga0501044_0047978
618 Ga0501045_0016353
619 Ga0501045_0056811
620 nmdc:mga09592_366928_c1
621 nmdc:mga0qj67_38135_c1
622 nmdc:mga08y16_85712_c1
623 nmdc:mga08y16_89768_c1
624 Ga0500620_013364
625 Ga0500627_0014340
626 Ga0501084_0035488
627 Ga0501084_0059820
628 Ga0466962_0033470
629 Ga0466962_0036804
630 Ga0530510_0019191
631 Ga0530510_0061277
632 Ga0530510_0179573
633 2643809236
634 2644064362
635 2644241281
636 2644378830
637 2644416194
638 2644449234
639 2644688458
640 2791211522
641 2819628806
642 2854684721
643 2857609832
644 2865002106
645 2904610708
646 2921261835
647 2937029670
648 2939596584
649 2941503408
650 2957398718
651 2957409512
652 2964619105
653 2967760252
654 2970109200
655 2977571401
656 8001850536
657 8005546191
658 8055531989

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03069

FmdA_AmdA

Acetamidase/Formamidase family

58

437

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f4l-assembly1.cif.gz_A crystal structure of a putative acetamidase (tm0119) from thermotoga maritima msb8 at 2.50 a resolution 0.7924 10 402
2f4l-assembly1.cif.gz_A crystal structure of a putative acetamidase (tm0119) from thermotoga maritima msb8 at 2.50 a resolution 0.7737 10 402
2f4l-assembly2.cif.gz_D crystal structure of a putative acetamidase (tm0119) from thermotoga maritima msb8 at 2.50 a resolution 0.7683 9 406
2f4l-assembly2.cif.gz_C crystal structure of a putative acetamidase (tm0119) from thermotoga maritima msb8 at 2.50 a resolution 0.7635 10 402
2f4l-assembly2.cif.gz_D crystal structure of a putative acetamidase (tm0119) from thermotoga maritima msb8 at 2.50 a resolution 0.7556 9 406
ID Description Score Start End Superfamily
2f4lB01 Mainly Beta;Sandwich;Jelly Rolls;Acetamidase/Formamidase-like domains 0.8251 11 298 2.60.120.580
2f4lB01 Mainly Beta;Sandwich;Jelly Rolls;Acetamidase/Formamidase-like domains 0.8053 11 298 2.60.120.580
af_Q5AJF2_20_284_2.60.120.580 Mainly Beta;Sandwich;Jelly Rolls;Acetamidase/Formamidase-like domains 0.5603 20 295 2.60.120.580
af_Q5AJF2_20_284_2.60.120.580 Mainly Beta;Sandwich;Jelly Rolls;Acetamidase/Formamidase-like domains 0.5443 20 295 2.60.120.580
af_Q95Y73_632_729_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.4282 341 423 3.30.70.240
ID Description Score Start End GO Terms
AF-A0A6A4U3P5-F1-model_v4 Acetamidase/formamidase 0.9936 190 423 GO:0016811
AF-A0A2D7VK94-F1-model_v4 Acetamidase 0.9889 302 421
AF-A0A1G9F4V1-F1-model_v4 Acetamidase/Formamidase family protein 0.988 243 423 GO:0016811
AF-A0A5D0MVP7-F1-model_v4 Acetamidase/formamidase family protein 0.9869 92 423 GO:0016811
AF-A0A1D8JJ09-F1-model_v4 Acetamidase 0.9857 7 423 GO:0016811

Map