F409475

General Info

Members Datasets Scaffolds Average Seq Length
328 273 656 219

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935975950|2935983486
Length 246
Sequence GSSKATPMRRPRGRETKIFSADEVVEVVRVLLVEDDRMIGAAVAEALKDAAYAIDWVQDGELAIEAIRSETYEIVLLDLGLPIVDGLDVLKEIRSSSRLPVIILSARDALTERIRGLDLGADDYIVKPFEVGELLARMRAVMRREGSGASPILGNGRLQLDPATREASYFGESAVLSAREFALLQALLARPGTILSRSELERHIYGWSEEVESNAVEFLIHAVRKKLGATAIRNVRGVGWMVDRPS

Samples

Sample ID Description Type Environment
1 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
42 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
43 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
46 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
47 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
48 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
49 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
51 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
52 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
91 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
92 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
100 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
101 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
106 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
115 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
116 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
119 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
126 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
132 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
168 3300053097 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 endosphere Metagenome Endosphere
169 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
170 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
175 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
176 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
177 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
178 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
179 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
180 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
181 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
182 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
183 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
184 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
185 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
186 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
187 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
188 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
189 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
190 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
191 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
192 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
193 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
194 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
195 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
196 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
197 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
198 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
199 2904564687 Burkholderia sp. 571 Isolate Unclassified
200 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
201 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
202 2922368715
203 2922425934
204 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
205 2928163908 Burkholderia sp. 567 Isolate Unclassified
206 2928170801 Burkholderia sp. 572 Isolate Unclassified
207 2928536128 Burkholderia sola 565 Isolate Unclassified
208 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
209 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
210 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
211 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
212 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
213 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
214 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
215 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
216 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
217 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
218 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
219 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
220 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
221 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
222 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
223 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
224 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
225 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
226 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
227 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
228 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
229 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
230 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
231 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
232 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
233 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
234 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
235 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
236 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
237 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
238 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
239 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
240 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
241 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
242 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
243 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
244 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
245 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
246 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
247 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
248 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
249 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
250 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
251 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
252 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
253 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
254 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
255 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
256 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
257 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
258 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
259 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
260 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
261 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
262 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
263 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
264 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
265 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
266 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
267 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
268 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
269 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
270 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
271 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
272 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
273 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 69.94
Metatranscriptomes 0
Isolates 30.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.15
Nodule 23.78
Rhizoplane 4.88
Rhizosphere 46.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000634 3300002704 Bacteria 7198
2 JGI25156J39149_1002232 3300002705 Bacteria 7159
3 JGI25154J39366_1001373 3300002738 Bacteria 8849
4 rootL2_10156235 3300003322 Bacteria 2637
5 rootH1_10018196 3300003323 Bacteria 37386
6 Ga0055539_1004845 3300003752 Bacteria 1776
7 Ga0065165_1001790 3300005262 Bacteria 21188
8 Ga0068869_100429100 3300005334 Bacteria 1092
9 Ga0070660_100102069 3300005339 Bacteria 2273
10 Ga0070711_100017873 3300005439 Bacteria 4519
11 Ga0070711_100023265 3300005439 Bacteria 4027
12 Ga0070663_100769028 3300005455 Bacteria 824
13 Ga0068867_100383538 3300005459 Bacteria 1181
14 Ga0070707_100326364 3300005468 Bacteria 1491
15 Ga0070698_100097622 3300005471 Bacteria 2914
16 Ga0070697_100049632 3300005536 Bacteria 3406
17 Ga0070697_100145616 3300005536 Bacteria 1994
18 Ga0068853_100643315 3300005539 Bacteria 1009
19 Ga0068855_100061843 3300005563 Bacteria 4373
20 Ga0081540_1055270 3300005983 Bacteria 1934
21 Ga0070717_10014432 3300006028 Bacteria 6078
22 Ga0070717_10560752 3300006028 Bacteria 1035
23 Ga0075365_10013953 3300006038 Bacteria 4822
24 Ga0075363_100221632 3300006048 Bacteria 1084
25 Ga0070712_100213248 3300006175 Bacteria 1524
26 Ga0075370_10053977 3300006353 Bacteria 2281
27 Ga0075370_10310304 3300006353 Bacteria 939
28 Ga0099794_10045537 3300007265 Bacteria 2100
29 Ga0099794_10123689 3300007265 Bacteria 1303
30 Ga0099795_10016793 3300007788 Bacteria 2322
31 Ga0099795_10087031 3300007788 Bacteria 1205
32 Ga0105240_10006514 3300009093 Bacteria 17147
33 Ga0105240_10055482 3300009093 Bacteria 4961
34 Ga0105243_10326559 3300009148 Bacteria 1400
35 Ga0105242_10247573 3300009176 Bacteria 1605
36 Ga0105237_10118063 3300009545 Bacteria 2646
37 Ga0099796_10087285 3300010159 Bacteria 1154
38 Ga0105239_10005452 3300010375 Bacteria 14929
39 Ga0157373_10142004 3300013100 Bacteria 1689
40 Ga0157370_10012995 3300013104 Bacteria 8602
41 Ga0157369_10008668 3300013105 Bacteria 11659
42 Ga0157374_10000172 3300013296 Bacteria 59888
43 Ga0163162_10024213 3300013306 Bacteria 5991
44 Ga0157372_10013917 3300013307 Bacteria 8596
45 Ga0157375_10058245 3300013308 Bacteria 3821
46 Ga0163163_10061865 3300014325 Bacteria 3709
47 Ga0157380_10742988 3300014326 Bacteria 992
48 Ga0182007_10004886 3300015262 Bacteria 5989
49 Ga0213873_10006210 3300021358 Bacteria 2342
50 Ga0213874_10005289 3300021377 Bacteria 2999
51 Ga0213874_10020451 3300021377 Bacteria 1815
52 Ga0213876_10000440 3300021384 Bacteria 33787
53 Ga0213876_10022758 3300021384 Bacteria 3311
54 Ga0209435_100336 3300025206 Bacteria 11029
55 Ga0207427_100938 3300025231 Bacteria 12410
56 Ga0209646_1000061 3300025246 Bacteria 255495
57 Ga0209026_1005973 3300025250 Bacteria 3111
58 Ga0209677_104893 3300025253 Bacteria 3666
59 Ga0209759_1000541 3300025256 Bacteria 39503
60 Ga0209759_1021331 3300025256 Bacteria 1478
61 Ga0209233_1002821 3300025261 Bacteria 6239
62 Ga0209233_1011685 3300025261 Bacteria 2580
63 Ga0209455_1006343 3300025272 Bacteria 3504
64 Ga0207426_1000553 3300025302 Bacteria 51702
65 Ga0207426_1062725 3300025302 Bacteria 1063
66 Ga0207688_10463227 3300025901 Bacteria 791
67 Ga0207647_10001966 3300025904 Bacteria 15695
68 Ga0207684_10042182 3300025910 Bacteria 3868
69 Ga0207695_10125824 3300025913 Bacteria 2525
70 Ga0207693_10018584 3300025915 Bacteria 5534
71 Ga0207693_10075782 3300025915 Bacteria 2634
72 Ga0207693_10162342 3300025915 Bacteria 1758
73 Ga0207663_10042864 3300025916 Bacteria 2767
74 Ga0207657_10061972 3300025919 Bacteria 3204
75 Ga0207646_10356316 3300025922 Bacteria 1322
76 Ga0207700_10377100 3300025928 Bacteria 1240
77 Ga0207665_10133438 3300025939 Bacteria 1765
78 Ga0207689_10663861 3300025942 Bacteria 879
79 Ga0207679_10208152 3300025945 Bacteria 1638
80 Ga0207667_10126058 3300025949 Bacteria 2637
81 Ga0207667_10215610 3300025949 Bacteria 1967
82 Ga0207667_10619924 3300025949 Bacteria 1089
83 Ga0207668_10121569 3300025972 Bacteria 1978
84 Ga0207678_10039835 3300026067 Bacteria 4076
85 Ga0209588_1005134 3300027671 Bacteria 3734
86 Ga0209588_1043087 3300027671 Bacteria 1458
87 Ga0307515_10378605 3300028794 Bacteria 1049
88 Ga0307509_10161706 3300031507 Bacteria 2135
89 Ga0307510_10002125 3300033180 Bacteria 22403
90 Ga0373935_0128950 3300035692 Bacteria 1698
91 Ga0373927_0058125 3300035695 Bacteria 2501
92 Ga0395900_0204054 3300037418 Bacteria 1999
93 Ga0395900_0204566 3300037418 Bacteria 1996
94 Ga0395898_0516056 3300037466 Bacteria 1136
95 Ga0395905_0021964 3300037471 Bacteria 6036
96 Ga0395905_0468617 3300037471 Bacteria 1158
97 Ga0436364_1006046 3300037853 Bacteria 1717
98 Ga0436365_0799372 3300039437 Bacteria 13388
99 Ga0436365_1126682 3300039437 Bacteria 4361
100 Ga0436365_1681813 3300039437 Bacteria 17813
101 Ga0436365_1847488 3300039437 Bacteria 2972
102 Ga0436360_0250594 3300039438 Bacteria 801
103 Ga0436361_1050626 3300039447 Bacteria 2583
104 Ga0436363_0751819 3300039450 Bacteria 4226
105 Ga0436363_0988280 3300039450 Bacteria 2134
106 Ga0436362_0736326 3300039453 Bacteria 7489
107 Ga0466969_0254948 3300044656 Bacteria 795
108 Ga0453684_0177733 3300044712 Bacteria 2501
109 Ga0453684_0236640 3300044712 Bacteria 2105
110 Ga0466959_0359034 3300045049 Bacteria 993
111 Ga0466959_0482862 3300045049 Bacteria 838
112 Ga0451576_0001355 3300045051 Bacteria 42292
113 Ga0466958_0002371 3300045836 Bacteria 9433
114 Ga0466967_0645390 3300045976 Bacteria 1046
115 Ga0495617_120107 3300046452 Bacteria 847
116 Ga0495592_0149911 3300046454 Bacteria 1614
117 Ga0495603_0001215 3300046455 Bacteria 15040
118 Ga0495629_0000111 3300046459 Bacteria 73381
119 Ga0495651_0070886 3300046462 Bacteria 2651
120 Ga0495650_0000569 3300046471 Bacteria 51802
121 Ga0495580_0002561 3300046472 Bacteria 15845
122 Ga0495662_0018281 3300046476 Bacteria 3392
123 Ga0495664_0084500 3300046477 Bacteria 1905
124 Ga0495584_0026587 3300046491 Bacteria 2932
125 Ga0495607_0045028 3300046501 Bacteria 2598
126 Ga0495583_0059977 3300046506 Bacteria 1703
127 Ga0495583_0187001 3300046506 Bacteria 846
128 Ga0495606_0013680 3300046507 Bacteria 6393
129 Ga0495606_0036224 3300046507 Bacteria 3363
130 Ga0495606_0135678 3300046507 Bacteria 1458
131 Ga0495630_0091087 3300046517 Bacteria 2304
132 Ga0495643_0054502 3300046522 Bacteria 2140
133 Ga0495644_0076575 3300046523 Bacteria 1260
134 Ga0495648_0005296 3300046524 Bacteria 10763
135 Ga0495648_0005613 3300046524 Bacteria 10391
136 Ga0495648_0036691 3300046524 Bacteria 3158
137 Ga0495648_0139954 3300046524 Bacteria 1275
138 Ga0495652_0095381 3300046529 Bacteria 2424
139 Ga0495587_0428834 3300046536 Bacteria 733
140 Ga0495645_0000082 3300046543 Bacteria 65622
141 Ga0495622_0062720 3300046557 Bacteria 1720
142 Ga0495667_0018635 3300046559 Bacteria 4687
143 Ga0495668_0106465 3300046616 Bacteria 1534
144 Ga0495625_0076789 3300046660 Bacteria 2335
145 Ga0495625_0078471 3300046660 Bacteria 2305
146 Ga0495661_0251333 3300046665 Bacteria 902
147 Ga0495588_0082620 3300046674 Bacteria 1678
148 Ga0495646_0115451 3300046680 Bacteria 1524
149 Ga0495613_0012845 3300046689 Bacteria 6226
150 Ga0495649_0095125 3300046694 Bacteria 1586
151 Ga0495649_0152470 3300046694 Bacteria 1214
152 Ga0495589_0004651 3300046794 Bacteria 7294
153 Ga0495600_0028134 3300046809 Bacteria 3636
154 Ga0495600_0336524 3300046809 Bacteria 947
155 Ga0495581_0000719 3300047315 Bacteria 17467
156 Ga0495604_0049108 3300047317 Bacteria 3280
157 Ga0495672_0045962 3300047320 Bacteria 2607
158 Ga0495675_0079224 3300047444 Bacteria 2069
159 Ga0495679_044144 3300047446 Bacteria 1366
160 Ga0495673_0009327 3300047469 Bacteria 5438
161 Ga0495673_0097113 3300047469 Bacteria 1196
162 Ga0495684_0405499 3300047471 Bacteria 956
163 Ga0495686_0309078 3300047472 Bacteria 870
164 Ga0495593_0050988 3300047673 Bacteria 2191
165 Ga0495602_0022434 3300048088 Bacteria 6179
166 Ga0495614_0041392 3300048089 Bacteria 1976
167 Ga0495615_0031222 3300048090 Bacteria 1277
168 Ga0496100_0010472 3300048903 Bacteria 5250
169 Ga0496100_0099769 3300048903 Bacteria 1999
170 Ga0496101_0041986 3300048904 Bacteria 3264
171 Ga0496101_0616092 3300048904 Bacteria 858
172 Ga0496102_0209551 3300048905 Bacteria 1838
173 Ga0496104_0151819 3300048907 Bacteria 2223
174 Ga0496105_0068130 3300048908 Bacteria 2939
175 Ga0496106_0055125 3300048909 Bacteria 3004
176 Ga0496107_0079913 3300048910 Bacteria 2384
177 Ga0496107_0207749 3300048910 Bacteria 1456
178 Ga0496107_0271495 3300048910 Bacteria 1262
179 Ga0496110_0056986 3300048913 Bacteria 3439
180 Ga0496112_0136384 3300048915 Bacteria 2424
181 Ga0496113_0169421 3300048916 Bacteria 1729
182 Ga0496114_0090933 3300048917 Bacteria 2591
183 Ga0496115_0232317 3300048918 Bacteria 1521
184 Ga0496116_0118333 3300048919 Bacteria 1539
185 Ga0496117_0006790 3300048920 Bacteria 11410
186 Ga0496118_0006055 3300048921 Bacteria 13471
187 Ga0496118_0019245 3300048921 Bacteria 6112
188 Ga0496118_0135666 3300048921 Bacteria 1571
189 Ga0496119_0262800 3300048922 Bacteria 865
190 Ga0496120_0029597 3300048923 Bacteria 3342
191 Ga0496121_0020694 3300048924 Bacteria 6492
192 Ga0496121_0062620 3300048924 Bacteria 3045
193 Ga0496121_0284067 3300048924 Bacteria 1130
194 Ga0496121_0402637 3300048924 Bacteria 896
195 Ga0496126_0000064 3300048929 Bacteria 255729
196 Ga0501031_0013720 3300049568 Bacteria 5280
197 Ga0501032_0011112 3300049569 Bacteria 6471
198 Ga0501033_0002001 3300049570 Bacteria 17745
199 Ga0501034_0120581 3300049571 Bacteria 2609
200 Ga0501036_0035844 3300049572 Bacteria 4199
201 Ga0501037_0010381 3300049573 Bacteria 6832
202 Ga0501038_0016275 3300049574 Bacteria 6742
203 Ga0501038_0051565 3300049574 Bacteria 3550
204 Ga0501039_0028146 3300049575 Bacteria 4324
205 Ga0501043_0034537 3300049579 Bacteria 3977
206 Ga0501047_0104511 3300049581 Bacteria 2712
207 Ga0501070_0056571 3300049586 Bacteria 3251
208 Ga0501035_0018269 3300049822 Bacteria 6460
209 Ga0501035_0491585 3300049822 Bacteria 1011
210 Ga0501044_0055167 3300049823 Bacteria 4082
211 Ga0501044_0263778 3300049823 Bacteria 1660
212 nmdc:mga07m45_4501_c3 3300050496 Bacteria 2183
213 nmdc:mga0sz30_54398_c1 3300050516 Bacteria 1702
214 Ga0500578_0061102 3300053086 Bacteria 2406
215 Ga0500648_111837 3300053097 Bacteria 1507
216 Ga0500572_000171 3300053111 Bacteria 22849
217 Ga0500595_035435 3300053119 Bacteria 1643
218 Ga0500559_0000311 3300053136 Bacteria 36948
219 Ga0500559_0018431 3300053136 Bacteria 2950
220 Ga0500573_0017628 3300053140 Bacteria 4066
221 Ga0500616_0036375 3300053153 Bacteria 2672
222 Ga0500627_0185279 3300053158 Bacteria 936
223 Ga0500639_010470 3300053163 Bacteria 4857
224 Ga0500636_0006698 3300053177 Bacteria 6627
225 Ga0500636_0082951 3300053177 Bacteria 1844
226 Ga0500596_002364 3300053735 Bacteria 3726
227 Ga0500596_006541 3300053735 Bacteria 1964
228 Ga0500601_000899 3300053737 Bacteria 3548
229 2935983486 2935975950 Bacteria 8347125
230 2509077903 2508501114 Bacteria 7082538
231 2509146393 2508501128 Bacteria 8613869
232 2511252289 2511231003 Bacteria 5606035
233 2515682637 2515154122 Bacteria 8609520
234 2723879212 2721755763 Bacteria 4464185
235 2728749135 2728368998 Bacteria 8720350
236 2765570906 2765235838 Bacteria 5445269
237 2793068086 2791355197 Bacteria 8420563
238 2824661646 2824661429 Bacteria 9877870
239 2839099403 2839094727 Bacteria 5534556
240 2856291943 2856287931 Bacteria 7223934
241 2857360494 2857357740 Bacteria 9937880
242 2863427067 2863421361 Bacteria 7300805
243 2874632351 2874628541 Bacteria 8630250
244 2879108401 2879099564 Bacteria 10442239
245 2885386795 2885383462 Bacteria 9473874
246 2902691075 2902682994 Bacteria 8951596
247 2903749414 2903748898 Bacteria 9972761
248 2903771794 2903768456 Bacteria 9749579
249 2904570377 2904564687 Bacteria 7609577
250 2904577554 2904571731 Bacteria 7608790
251 2908739833 2908739725 Bacteria 8628932
252 2922374947
253 2922427004
254 2928161260 2928157003 Bacteria 7522202
255 2928168094 2928163908 Bacteria 7561269
256 2928175654 2928170801 Bacteria 8785406
257 2928542651 2928536128 Bacteria 7657547
258 2932788853 2932784394 Bacteria 9704911
259 2932797952 2932794094 Bacteria 7915132
260 2932807204 2932801729 Bacteria 7987968
261 2932812829 2932809354 Bacteria 9135765
262 2932819079 2932818245 Bacteria 9955613
263 2932830519 2932828146 Bacteria 9745859
264 2935616814 2935616580 Bacteria 9032984
265 2935633152 2935630451 Bacteria 8169952
266 2935641856 2935638405 Bacteria 10015038
267 2935672987 2935665750 Bacteria 9571747
268 2935683505 2935675223 Bacteria 9928132
269 2935685781 2935684952 Bacteria 9590419
270 2935697965 2935694250 Bacteria 9291695
271 2935705629 2935703347 Bacteria 10242284
272 2935714333 2935713505 Bacteria 9608509
273 2935724952 2935722832 Bacteria 9608746
274 2935732689 2935732158 Bacteria 9706831
275 2935742068 2935741537 Bacteria 9707219
276 2935751746 2935750917 Bacteria 9590372
277 2935773724 2935769743 Bacteria 7878163
278 2935792484 2935785616 Bacteria 7962367
279 2935795534 2935793552 Bacteria 8012592
280 2935802607 2935801545 Bacteria 9301974
281 2935813563 2935810662 Bacteria 9401221
282 2935830023 2935827899 Bacteria 10038562
283 2935837941 2935837841 Bacteria 9454360
284 2935855438 2935855204 Bacteria 9035059
285 2935867317 2935864058 Bacteria 9784707
286 2935875863 2935873716 Bacteria 9632195
287 2935885852 2935883170 Bacteria 7964738
288 2935916898 2935908558 Bacteria 8568796
289 2935924387 2935916978 Bacteria 9113783
290 2935934399 2935926038 Bacteria 8601059
291 2935942867 2935934488 Bacteria 8602579
292 2935951306 2935942939 Bacteria 8599779
293 2935959748 2935951376 Bacteria 8602333
294 2935960844 2935959822 Bacteria 7869783
295 2935975869 2935967501 Bacteria 8603075
296 2935996527 2935992306 Bacteria 9802711
297 2936003807 2936002035 Bacteria 9362176
298 2936042736 2936037263 Bacteria 9446081
299 2940557451 2940556831 Bacteria 9590747
300 2941509546 2941507105 Bacteria 8166816
301 2941517375 2941515067 Bacteria 8166720
302 2941526672 2941523033 Bacteria 8169134
303 2941533229 2941531003 Bacteria 7653939
304 2941539393 2941538514 Bacteria 9402094
305 2981993201 2981990288 Bacteria 7590678
306 3005715319 3005710791 Bacteria 7622528
307 642414645 641736154 Bacteria 7689995
308 8016521769 8016511872 Bacteria 9921665
309 8016631221 8016630954 Bacteria 9217207
310 8017063880 8017057580 Bacteria 10023680
311 8019561126 8019555841 Bacteria 9642137
312 8019571213 8019565922 Bacteria 9639779
313 8019583232 8019576017 Bacteria 10049540
314 8019591039 8019586578 Bacteria 10212056
315 8019600303 8019597564 Bacteria 10041141
316 8019618237 8019608314 Bacteria 10042931
317 8019625829 8019619141 Bacteria 9218857
318 8019629637 8019629233 Bacteria 8687553
319 8019639783 8019638758 Bacteria 9062356
320 8019648332 8019638758 Bacteria 9062356
321 8019659712 8019659431 Bacteria 8577854
322 8019667834 8019659431 Bacteria 8577854
323 8019669238 8019668869 Bacteria 8791617
324 8019674871 8019668869 Bacteria 8791617
325 8019678310 8019678201 Bacteria 8863603
326 8019681223 8019678201 Bacteria 8863603
327 8019691620 8019687851 Bacteria 8712826
328 8019691938 8019687851 Bacteria 8712826
329 JGI25155J39150_1000634
330 JGI25156J39149_1002232
331 JGI25154J39366_1001373
332 rootL2_10156235
333 rootH1_10018196
334 Ga0055539_1004845
335 Ga0065165_1001790
336 Ga0068869_100429100
337 Ga0070660_100102069
338 Ga0070711_100017873
339 Ga0070711_100023265
340 Ga0070663_100769028
341 Ga0068867_100383538
342 Ga0070707_100326364
343 Ga0070698_100097622
344 Ga0070697_100049632
345 Ga0070697_100145616
346 Ga0068853_100643315
347 Ga0068855_100061843
348 Ga0081540_1055270
349 Ga0070717_10014432
350 Ga0070717_10560752
351 Ga0075365_10013953
352 Ga0075363_100221632
353 Ga0070712_100213248
354 Ga0075370_10053977
355 Ga0075370_10310304
356 Ga0099794_10045537
357 Ga0099794_10123689
358 Ga0099795_10016793
359 Ga0099795_10087031
360 Ga0105240_10006514
361 Ga0105240_10055482
362 Ga0105243_10326559
363 Ga0105242_10247573
364 Ga0105237_10118063
365 Ga0099796_10087285
366 Ga0105239_10005452
367 Ga0157373_10142004
368 Ga0157370_10012995
369 Ga0157369_10008668
370 Ga0157374_10000172
371 Ga0163162_10024213
372 Ga0157372_10013917
373 Ga0157375_10058245
374 Ga0163163_10061865
375 Ga0157380_10742988
376 Ga0182007_10004886
377 Ga0213873_10006210
378 Ga0213874_10005289
379 Ga0213874_10020451
380 Ga0213876_10000440
381 Ga0213876_10022758
382 Ga0209435_100336
383 Ga0207427_100938
384 Ga0209646_1000061
385 Ga0209026_1005973
386 Ga0209677_104893
387 Ga0209759_1000541
388 Ga0209759_1021331
389 Ga0209233_1002821
390 Ga0209233_1011685
391 Ga0209455_1006343
392 Ga0207426_1000553
393 Ga0207426_1062725
394 Ga0207688_10463227
395 Ga0207647_10001966
396 Ga0207684_10042182
397 Ga0207695_10125824
398 Ga0207693_10018584
399 Ga0207693_10075782
400 Ga0207693_10162342
401 Ga0207663_10042864
402 Ga0207657_10061972
403 Ga0207646_10356316
404 Ga0207700_10377100
405 Ga0207665_10133438
406 Ga0207689_10663861
407 Ga0207679_10208152
408 Ga0207667_10126058
409 Ga0207667_10215610
410 Ga0207667_10619924
411 Ga0207668_10121569
412 Ga0207678_10039835
413 Ga0209588_1005134
414 Ga0209588_1043087
415 Ga0307515_10378605
416 Ga0307509_10161706
417 Ga0307510_10002125
418 Ga0373935_0128950
419 Ga0373927_0058125
420 Ga0395900_0204054
421 Ga0395900_0204566
422 Ga0395898_0516056
423 Ga0395905_0021964
424 Ga0395905_0468617
425 Ga0436364_1006046
426 Ga0436365_0799372
427 Ga0436365_1126682
428 Ga0436365_1681813
429 Ga0436365_1847488
430 Ga0436360_0250594
431 Ga0436361_1050626
432 Ga0436363_0751819
433 Ga0436363_0988280
434 Ga0436362_0736326
435 Ga0466969_0254948
436 Ga0453684_0177733
437 Ga0453684_0236640
438 Ga0466959_0359034
439 Ga0466959_0482862
440 Ga0451576_0001355
441 Ga0466958_0002371
442 Ga0466967_0645390
443 Ga0495617_120107
444 Ga0495592_0149911
445 Ga0495603_0001215
446 Ga0495629_0000111
447 Ga0495651_0070886
448 Ga0495650_0000569
449 Ga0495580_0002561
450 Ga0495662_0018281
451 Ga0495664_0084500
452 Ga0495584_0026587
453 Ga0495607_0045028
454 Ga0495583_0059977
455 Ga0495583_0187001
456 Ga0495606_0013680
457 Ga0495606_0036224
458 Ga0495606_0135678
459 Ga0495630_0091087
460 Ga0495643_0054502
461 Ga0495644_0076575
462 Ga0495648_0005296
463 Ga0495648_0005613
464 Ga0495648_0036691
465 Ga0495648_0139954
466 Ga0495652_0095381
467 Ga0495587_0428834
468 Ga0495645_0000082
469 Ga0495622_0062720
470 Ga0495667_0018635
471 Ga0495668_0106465
472 Ga0495625_0076789
473 Ga0495625_0078471
474 Ga0495661_0251333
475 Ga0495588_0082620
476 Ga0495646_0115451
477 Ga0495613_0012845
478 Ga0495649_0095125
479 Ga0495649_0152470
480 Ga0495589_0004651
481 Ga0495600_0028134
482 Ga0495600_0336524
483 Ga0495581_0000719
484 Ga0495604_0049108
485 Ga0495672_0045962
486 Ga0495675_0079224
487 Ga0495679_044144
488 Ga0495673_0009327
489 Ga0495673_0097113
490 Ga0495684_0405499
491 Ga0495686_0309078
492 Ga0495593_0050988
493 Ga0495602_0022434
494 Ga0495614_0041392
495 Ga0495615_0031222
496 Ga0496100_0010472
497 Ga0496100_0099769
498 Ga0496101_0041986
499 Ga0496101_0616092
500 Ga0496102_0209551
501 Ga0496104_0151819
502 Ga0496105_0068130
503 Ga0496106_0055125
504 Ga0496107_0079913
505 Ga0496107_0207749
506 Ga0496107_0271495
507 Ga0496110_0056986
508 Ga0496112_0136384
509 Ga0496113_0169421
510 Ga0496114_0090933
511 Ga0496115_0232317
512 Ga0496116_0118333
513 Ga0496117_0006790
514 Ga0496118_0006055
515 Ga0496118_0019245
516 Ga0496118_0135666
517 Ga0496119_0262800
518 Ga0496120_0029597
519 Ga0496121_0020694
520 Ga0496121_0062620
521 Ga0496121_0284067
522 Ga0496121_0402637
523 Ga0496126_0000064
524 Ga0501031_0013720
525 Ga0501032_0011112
526 Ga0501033_0002001
527 Ga0501034_0120581
528 Ga0501036_0035844
529 Ga0501037_0010381
530 Ga0501038_0016275
531 Ga0501038_0051565
532 Ga0501039_0028146
533 Ga0501043_0034537
534 Ga0501047_0104511
535 Ga0501070_0056571
536 Ga0501035_0018269
537 Ga0501035_0491585
538 Ga0501044_0055167
539 Ga0501044_0263778
540 nmdc:mga07m45_4501_c3
541 nmdc:mga0sz30_54398_c1
542 Ga0500578_0061102
543 Ga0500648_111837
544 Ga0500572_000171
545 Ga0500595_035435
546 Ga0500559_0000311
547 Ga0500559_0018431
548 Ga0500573_0017628
549 Ga0500616_0036375
550 Ga0500627_0185279
551 Ga0500639_010470
552 Ga0500636_0006698
553 Ga0500636_0082951
554 Ga0500596_002364
555 Ga0500596_006541
556 Ga0500601_000899
557 2935983486
558 2509077903
559 2509146393
560 2511252289
561 2515682637
562 2723879212
563 2728749135
564 2765570906
565 2793068086
566 2824661646
567 2839099403
568 2856291943
569 2857360494
570 2863427067
571 2874632351
572 2879108401
573 2885386795
574 2902691075
575 2903749414
576 2903771794
577 2904570377
578 2904577554
579 2908739833
580 2922374947
581 2922427004
582 2928161260
583 2928168094
584 2928175654
585 2928542651
586 2932788853
587 2932797952
588 2932807204
589 2932812829
590 2932819079
591 2932830519
592 2935616814
593 2935633152
594 2935641856
595 2935672987
596 2935683505
597 2935685781
598 2935697965
599 2935705629
600 2935714333
601 2935724952
602 2935732689
603 2935742068
604 2935751746
605 2935773724
606 2935792484
607 2935795534
608 2935802607
609 2935813563
610 2935830023
611 2935837941
612 2935855438
613 2935867317
614 2935875863
615 2935885852
616 2935916898
617 2935924387
618 2935934399
619 2935942867
620 2935951306
621 2935959748
622 2935960844
623 2935975869
624 2935996527
625 2936003807
626 2936042736
627 2940557451
628 2941509546
629 2941517375
630 2941526672
631 2941533229
632 2941539393
633 2981993201
634 3005715319
635 642414645
636 8016521769
637 8016631221
638 8017063880
639 8019561126
640 8019571213
641 8019583232
642 8019591039
643 8019600303
644 8019618237
645 8019625829
646 8019629637
647 8019639783
648 8019648332
649 8019659712
650 8019667834
651 8019669238
652 8019674871
653 8019678310
654 8019681223
655 8019691620
656 8019691938

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

30

139

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.9835 2 118
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9824 1 118
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9824 1 118
6is2-assembly1.cif.gz_A crystal structure of staphylococcus aureus response regulator arlr receiver domain in complex with mg 0.9818 1 120
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9815 1 118
ID Description Score Start End Superfamily
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9845 1 80 3.40.50.2300
af_P52076_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9803 1 80 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9788 2 117 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9776 1 80 3.40.50.2300
5hm6B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9763 2 118 3.40.50.2300
ID Description Score Start End GO Terms
AF-G7LKS4-F1-model_v4 Two component transcriptional regulator, winged helix family 0.9047 2 217 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A376MVG2-F1-model_v4 histidine kinase (EC 2.7.13.3) (Sensor histidine protein kinase/phosphatase PhoQ) 0.9041 1 216 GO:0000155
GO:0003677
GO:0004721
GO:0005524
GO:0005886
GO:0006355
GO:0046872
AF-G7LKS4-F1-model_v4 Two component transcriptional regulator, winged helix family 0.8856 2 217 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A376MVG2-F1-model_v4 histidine kinase (EC 2.7.13.3) (Sensor histidine protein kinase/phosphatase PhoQ) 0.885 1 216 GO:0000155
GO:0003677
GO:0004721
GO:0005524
GO:0005886
GO:0006355
GO:0046872
AF-A0A847S4Z5-F1-model_v4 Response regulator transcription factor 0.8776 1 219 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map