F409286

General Info

Members Datasets Scaffolds Average Seq Length
328 214 321 346

Family's Representative Sequence

Representative Sequence 3300026142|Ga0207698_10132165|Ga0207698_101321653
Length 379
Sequence MHWRGALLTGCVYAGSSAGTNEHAPGSLQMADSDLAFPAEDTSGIAPMEARLVNALPEGLDWLYEPKWDGFRCIAWREGDRVALRSKSGKPLGRYFPEVESLLLGLPHKSFVIDGELGVAVDGRLSFAALQARLHPAESRIRRLSKETPAQFMLFDCLARDGEGLADRPFAERRAALEVFHAASPHPALLLSPITADAAVARHWLARAGAALDGVIAKRRDLAYRPGERAMAKIKQHRTADCVVGGFRYASGTSRALGSLLLGLYDEGGRLDHVGFTSSFDAAERTELLDMVEPLIGEPGFTGDAPGGPSRWATERSAEWQPLCPELVAEVRYDQVTGQRFRHGTRFLRWRPDKAPESCRLDQLTGELAPAELEELLGL

Samples

Sample ID Description Type Environment
1 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
2 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
3 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
4 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
5 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
6 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
7 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
8 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
11 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
12 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
13 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
14 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
15 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
16 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
17 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
18 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
23 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
56 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
57 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
58 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
59 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
60 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
61 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
62 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
63 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
65 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
66 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
82 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
88 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
142 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
143 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
144 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
145 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
146 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
147 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
148 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
149 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
150 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
151 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
152 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
153 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
154 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
155 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
156 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
157 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
158 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
159 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
160 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
161 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
162 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
163 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
164 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
165 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
166 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
167 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
168 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
169 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
170 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
171 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
172 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
173 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
174 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
175 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
176 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
177 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
178 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
179 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
180 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
181 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
182 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
183 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
184 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
185 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
186 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
187 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
188 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
189 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
190 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
191 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
192 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
193 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
194 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
195 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
196 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
197 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
202 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
203 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
204 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
205 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
206 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
207 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
208 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
209 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
210 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
211 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
212 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
213 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
214 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.87
Metatranscriptomes 0
Isolates 2.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.4
Nodule 0.3
Rhizoplane 3.35
Rhizosphere 82.93
Stem 0
Stem Tuber 0
Unclassified 7.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000169 3300001904 Bacteria 11641
2 JGI24740J21852_10006789 3300001979 Bacteria 4704
3 JGI24739J22299_10002364 3300001989 Bacteria 7265
4 JGI24737J22298_10003708 3300001990 Bacteria 5378
5 JGI24737J22298_10023914 3300001990 Bacteria 1936
6 JGI24735J21928_10026007 3300002067 Bacteria 1763
7 JGI24748J21848_1000047 3300002074 Bacteria 57881
8 JGI24738J21930_10000497 3300002075 Bacteria 11177
9 JGI24738J21930_10001803 3300002075 Bacteria 5823
10 JGI24034J26672_10000014 3300002239 Bacteria 139881
11 rootH1_10062834 3300003316 Bacteria 2066
12 rootH1_10090639 3300003316 Bacteria 1370
13 Ga0055537_1006901 3300003773 Bacteria 2810
14 Ga0055536_1015352 3300003781 Bacteria 2627
15 Ga0055540_1000185 3300003792 Bacteria 60356
16 Ga0055531_10000088 3300003794 Bacteria 100973
17 Ga0070658_10000062 3300005327 Bacteria 107844
18 Ga0070658_10020752 3300005327 Bacteria 5263
19 Ga0070658_10054609 3300005327 Bacteria 3243
20 Ga0070676_10012883 3300005328 Bacteria 4578
21 Ga0070690_100000004 3300005330 Bacteria 144000
22 Ga0070670_100058334 3300005331 Bacteria 3314
23 Ga0070666_10000011 3300005335 Bacteria 261736
24 Ga0070666_10045952 3300005335 Bacteria 2928
25 Ga0070680_100108702 3300005336 Bacteria 2307
26 Ga0068868_100013525 3300005338 Bacteria 5985
27 Ga0070660_100000377 3300005339 Bacteria 29678
28 Ga0070660_100223461 3300005339 Bacteria 1531
29 Ga0070660_100318943 3300005339 Bacteria 1276
30 Ga0070661_100110188 3300005344 Bacteria 2055
31 Ga0070668_100026096 3300005347 Bacteria 4431
32 Ga0070669_100000009 3300005353 Bacteria 224683
33 Ga0070671_100006402 3300005355 Bacteria 9408
34 Ga0070674_100034859 3300005356 Bacteria 3365
35 Ga0070688_100010189 3300005365 Bacteria 5175
36 Ga0070659_100009411 3300005366 Bacteria 7173
37 Ga0070659_100019850 3300005366 Bacteria 5101
38 Ga0070659_100041935 3300005366 Bacteria 3578
39 Ga0070667_100038775 3300005367 Bacteria 3995
40 Ga0070708_100087868 3300005445 Bacteria 2825
41 Ga0070663_100000285 3300005455 Bacteria 25745
42 Ga0070663_100066160 3300005455 Bacteria 2618
43 Ga0070681_10128249 3300005458 Bacteria 2469
44 Ga0070681_10219781 3300005458 Unclassified 1815
45 Ga0070685_10000970 3300005466 Bacteria 15426
46 Ga0070679_100091124 3300005530 Bacteria 3036
47 Ga0070684_100195745 3300005535 Bacteria 1840
48 Ga0068853_100007016 3300005539 Bacteria 9004
49 Ga0068853_100007657 3300005539 Bacteria 8658
50 Ga0068853_100009007 3300005539 Bacteria 8038
51 Ga0068853_100028040 3300005539 Bacteria 4736
52 Ga0068853_100305147 3300005539 Bacteria 1472
53 Ga0070672_100232234 3300005543 Bacteria 1550
54 Ga0070686_100000001 3300005544 Bacteria 515830
55 Ga0070665_100000004 3300005548 Bacteria 785500
56 Ga0070665_100009625 3300005548 Bacteria 9776
57 Ga0068855_100000683 3300005563 Bacteria 41478
58 Ga0068855_100025811 3300005563 Bacteria 7026
59 Ga0068855_100082761 3300005563 Bacteria 3719
60 Ga0068855_100212375 3300005563 Bacteria 2174
61 Ga0068857_100012795 3300005577 Bacteria 7313
62 Ga0068857_100195621 3300005577 Bacteria 1842
63 Ga0068857_100226998 3300005577 Bacteria 1707
64 Ga0068857_100284882 3300005577 Bacteria 1520
65 Ga0068854_100000265 3300005578 Bacteria 35689
66 Ga0068854_100026801 3300005578 Bacteria 3965
67 Ga0068856_100083524 3300005614 Bacteria 3172
68 Ga0068856_100230717 3300005614 Bacteria 1866
69 Ga0068852_100004651 3300005616 Bacteria 9731
70 Ga0068852_100007006 3300005616 Bacteria 8206
71 Ga0068852_100112591 3300005616 Bacteria 2477
72 Ga0068859_100028136 3300005617 Bacteria 5635
73 Ga0068864_100105164 3300005618 Bacteria 2508
74 Ga0068861_100009695 3300005719 Bacteria 6657
75 Ga0068851_10022470 3300005834 Bacteria 3073
76 Ga0068851_10082736 3300005834 Bacteria 1678
77 Ga0068870_10060714 3300005840 Unclassified 2030
78 Ga0068863_100000010 3300005841 Bacteria 237758
79 Ga0068858_100007787 3300005842 Bacteria 10341
80 Ga0068860_100000030 3300005843 Bacteria 256364
81 Ga0068860_100043584 3300005843 Bacteria 4280
82 Ga0068862_100000421 3300005844 Bacteria 45988
83 Ga0081455_10204435 3300005937 Bacteria 1476
84 Ga0075369_10000022 3300006186 Bacteria 44375
85 Ga0097621_100014631 3300006237 Bacteria 5879
86 Ga0097621_100056526 3300006237 Bacteria 3206
87 Ga0075370_10079842 3300006353 Unclassified 1879
88 Ga0068871_100007136 3300006358 Bacteria 7968
89 Ga0068871_100030185 3300006358 Bacteria 4266
90 Ga0075428_100291949 3300006844 Bacteria 1754
91 Ga0097620_100028136 3300006931 Bacteria 5635
92 Ga0105250_10033167 3300009092 Bacteria 2072
93 Ga0105240_10007910 3300009093 Bacteria 15335
94 Ga0105240_10009338 3300009093 Bacteria 13900
95 Ga0105240_10025860 3300009093 Bacteria 7708
96 Ga0105240_10057478 3300009093 Bacteria 4860
97 Ga0111539_10148001 3300009094 Bacteria 2749
98 Ga0114129_10199141 3300009147 Bacteria 2713
99 Ga0105241_10021942 3300009174 Bacteria 4727
100 Ga0105241_10061674 3300009174 Bacteria 2888
101 Ga0105237_10064119 3300009545 Bacteria 3671
102 Ga0105237_10306435 3300009545 Bacteria 1591
103 Ga0105238_10007906 3300009551 Bacteria 10641
104 Ga0105238_10063389 3300009551 Bacteria 3696
105 Ga0105238_10087192 3300009551 Bacteria 3108
106 Ga0105238_10224808 3300009551 Bacteria 1854
107 Ga0105238_10418451 3300009551 Bacteria 1334
108 Ga0105249_10000016 3300009553 Bacteria 278643
109 Ga0105239_10006985 3300010375 Bacteria 13007
110 Ga0105239_10038109 3300010375 Bacteria 5267
111 Ga0105239_10164294 3300010375 Bacteria 2482
112 Ga0105239_10226192 3300010375 Bacteria 2099
113 Ga0105246_10010790 3300011119 Bacteria 5663
114 Ga0157373_10105847 3300013100 Bacteria 1978
115 Ga0157371_10026308 3300013102 Bacteria 4231
116 Ga0157370_10214553 3300013104 Bacteria 1783
117 Ga0157369_10159847 3300013105 Bacteria 2378
118 Ga0157374_10017476 3300013296 Bacteria 6317
119 Ga0157372_10177138 3300013307 Bacteria 2468
120 Ga0163163_10021259 3300014325 Bacteria 6120
121 Ga0157380_10000586 3300014326 Bacteria 22483
122 Ga0157380_10116524 3300014326 Bacteria 2255
123 Ga0157379_10027722 3300014968 Bacteria 5042
124 Ga0163161_10000037 3300017792 Bacteria 150124
125 Ga0207672_1000427 3300025223 Bacteria 5333
126 Ga0209148_1000074 3300025254 Bacteria 314356
127 Ga0209148_1001417 3300025254 Bacteria 12281
128 Ga0209565_1000062 3300025263 Bacteria 184007
129 Ga0209455_1000767 3300025272 Bacteria 18024
130 Ga0209130_1006934 3300025284 Bacteria 3584
131 Ga0209676_1000288 3300025292 Bacteria 103217
132 Ga0209050_1000001 3300025298 Bacteria 3563507
133 Ga0209051_1000209 3300025303 Bacteria 102832
134 Ga0209257_1000111 3300025304 Bacteria 234809
135 Ga0207656_10020223 3300025321 Bacteria 2644
136 Ga0207680_10000008 3300025903 Bacteria 518177
137 Ga0207647_10001428 3300025904 Bacteria 18307
138 Ga0207647_10032418 3300025904 Bacteria 3356
139 Ga0207645_10107634 3300025907 Bacteria 1803
140 Ga0207643_10037521 3300025908 Bacteria 2719
141 Ga0207705_10000179 3300025909 Bacteria 66765
142 Ga0207705_10001339 3300025909 Bacteria 19735
143 Ga0207705_10013489 3300025909 Bacteria 5895
144 Ga0207705_10023934 3300025909 Bacteria 4358
145 Ga0207654_10003514 3300025911 Bacteria 7926
146 Ga0207654_10007362 3300025911 Bacteria 5544
147 Ga0207707_10123723 3300025912 Bacteria 2262
148 Ga0207707_10201794 3300025912 Unclassified 1734
149 Ga0207695_10002292 3300025913 Bacteria 28581
150 Ga0207695_10049402 3300025913 Bacteria 4434
151 Ga0207695_10100005 3300025913 Bacteria 2896
152 Ga0207671_10003090 3300025914 Bacteria 16968
153 Ga0207657_10000791 3300025919 Bacteria 33627
154 Ga0207657_10046770 3300025919 Bacteria 3789
155 Ga0207649_10036910 3300025920 Bacteria 2947
156 Ga0207652_10019278 3300025921 Bacteria 5608
157 Ga0207681_10000020 3300025923 Bacteria 240498
158 Ga0207694_10002158 3300025924 Bacteria 16167
159 Ga0207694_10014086 3300025924 Bacteria 6028
160 Ga0207694_10016492 3300025924 Bacteria 5578
161 Ga0207694_10104429 3300025924 Bacteria 2248
162 Ga0207650_10078800 3300025925 Bacteria 2493
163 Ga0207700_10310086 3300025928 Bacteria 1365
164 Ga0207644_10000154 3300025931 Bacteria 49572
165 Ga0207644_10013042 3300025931 Bacteria 5531
166 Ga0207644_10031557 3300025931 Bacteria 3692
167 Ga0207690_10010887 3300025932 Bacteria 5421
168 Ga0207690_10354812 3300025932 Bacteria 1160
169 Ga0207706_10030633 3300025933 Bacteria 4797
170 Ga0207706_10033078 3300025933 Bacteria 4603
171 Ga0207706_10066542 3300025933 Bacteria 3171
172 Ga0207669_10030921 3300025937 Bacteria 2983
173 Ga0207691_10194719 3300025940 Bacteria 1767
174 Ga0207711_10018531 3300025941 Bacteria 5788
175 Ga0207661_10030257 3300025944 Bacteria 4169
176 Ga0207679_10271285 3300025945 Bacteria 1451
177 Ga0207667_10034461 3300025949 Bacteria 5435
178 Ga0207667_10243411 3300025949 Unclassified 1840
179 Ga0207712_10000009 3300025961 Bacteria 518177
180 Ga0207668_10017063 3300025972 Bacteria 4542
181 Ga0207640_10000139 3300025981 Bacteria 53517
182 Ga0207640_10026347 3300025981 Bacteria 3528
183 Ga0207640_10095304 3300025981 Bacteria 2072
184 Ga0207658_10021432 3300025986 Bacteria 4486
185 Ga0207658_10026738 3300025986 Bacteria 4048
186 Ga0207677_10007293 3300026023 Bacteria 6103
187 Ga0207703_10015934 3300026035 Bacteria 5863
188 Ga0207639_10006063 3300026041 Bacteria 8205
189 Ga0207639_10100806 3300026041 Bacteria 2333
190 Ga0207639_10147124 3300026041 Bacteria 1969
191 Ga0207639_10195246 3300026041 Unclassified 1732
192 Ga0207678_10000972 3300026067 Bacteria 26111
193 Ga0207678_10011285 3300026067 Bacteria 7844
194 Ga0207702_10030429 3300026078 Bacteria 4499
195 Ga0207641_10000333 3300026088 Bacteria 57821
196 Ga0207676_10039676 3300026095 Bacteria 3603
197 Ga0207674_10015150 3300026116 Bacteria 8484
198 Ga0207674_10042540 3300026116 Bacteria 4691
199 Ga0207675_100000652 3300026118 Bacteria 34149
200 Ga0207698_10000294 3300026142 Bacteria 30242
201 Ga0207698_10000899 3300026142 Bacteria 17306
202 Ga0207698_10010370 3300026142 Bacteria 5982
203 Ga0207698_10132165 3300026142 Bacteria 2135
204 Ga0207698_10182182 3300026142 Bacteria 1862
205 Ga0268266_10000009 3300028379 Bacteria 1097737
206 Ga0268266_10000975 3300028379 Bacteria 36323
207 Ga0268265_10000149 3300028380 Bacteria 86376
208 Ga0268264_10000003 3300028381 Bacteria 1141976
209 Ga0268264_10039437 3300028381 Bacteria 3903
210 Ga0307408_100038721 3300031548 Bacteria 3365
211 Ga0307405_10020935 3300031731 Bacteria 3666
212 Ga0307413_10078539 3300031824 Bacteria 2106
213 Ga0307410_10078671 3300031852 Bacteria 2308
214 Ga0307406_10023314 3300031901 Bacteria 3681
215 Ga0307406_10070677 3300031901 Bacteria 2286
216 Ga0307406_10135659 3300031901 Bacteria 1734
217 Ga0307412_10091140 3300031911 Bacteria 2133
218 Ga0307412_10163591 3300031911 Bacteria 1656
219 Ga0307409_100011388 3300031995 Bacteria 5604
220 Ga0307409_100015878 3300031995 Bacteria 4961
221 Ga0307416_100011783 3300032002 Bacteria 5855
222 Ga0307416_100025456 3300032002 Bacteria 4337
223 Ga0307416_100208799 3300032002 Bacteria 1860
224 Ga0307414_10012794 3300032004 Bacteria 4978
225 Ga0307411_10002758 3300032005 Bacteria 7897
226 Ga0307411_10011423 3300032005 Bacteria 4793
227 Ga0307415_100014599 3300032126 Bacteria 4624
228 Ga0307415_100015991 3300032126 Bacteria 4458
229 Ga0395900_0101394 3300037418 Unclassified 2957
230 Ga0395898_0026028 3300037466 Bacteria 5891
231 Ga0395905_0065530 3300037471 Bacteria 3401
232 Ga0395901_0318063 3300038443 Bacteria 1611
233 Ga0436365_1191004 3300039437 Bacteria 3279
234 Ga0436360_1255897 3300039438 Bacteria 8028
235 Ga0436363_1060357 3300039450 Unclassified 4012
236 Ga0439465_0001476 3300041413 Bacteria 7617
237 Ga0451806_753049 3300041462 Bacteria 3512
238 Ga0439448_0007660 3300042005 Bacteria 3137
239 Ga0439448_0010586 3300042005 Bacteria 2737
240 Ga0439455_0000097 3300042012 Bacteria 8524
241 Ga0439455_0000283 3300042012 Bacteria 6282
242 Ga0439455_0027036 3300042012 Bacteria 1404
243 Ga0439458_0000367 3300042157 Bacteria 11339
244 Ga0439458_0000388 3300042157 Bacteria 11090
245 Ga0439458_0011534 3300042157 Bacteria 1978
246 Ga0439458_0030381 3300042157 Bacteria 1285
247 Ga0466972_0002157 3300044658 Bacteria 9673
248 Ga0466965_0004934 3300044683 Bacteria 5966
249 Ga0466966_0027140 3300044684 Bacteria 3734
250 Ga0466966_0052311 3300044684 Bacteria 2595
251 Ga0466966_0224266 3300044684 Bacteria 1134
252 Ga0466963_0010040 3300044694 Bacteria 5724
253 Ga0466963_0056019 3300044694 Bacteria 2623
254 Ga0466971_0003231 3300044719 Bacteria 6957
255 Ga0466968_0013217 3300044735 Bacteria 3244
256 Ga0466970_0000026 3300044765 Bacteria 56864
257 Ga0466957_0008982 3300044842 Bacteria 5697
258 Ga0466960_0003121 3300044901 Bacteria 6348
259 Ga0466959_0027805 3300045049 Bacteria 4194
260 Ga0466959_0149284 3300045049 Bacteria 1648
261 Ga0466958_0004137 3300045836 Bacteria 7618
262 Ga0466958_0075952 3300045836 Bacteria 2061
263 Ga0466958_0098028 3300045836 Bacteria 1819
264 Ga0466967_0015827 3300045976 Bacteria 5927
265 Ga0466967_0041417 3300045976 Bacteria 3971
266 Ga0466967_0077585 3300045976 Bacteria 2991
267 Ga0466967_0107742 3300045976 Bacteria 2556
268 Ga0495585_0065789 3300046492 Bacteria 1986
269 Ga0495606_0002497 3300046507 Bacteria 21241
270 Ga0495618_0056800 3300046514 Bacteria 2478
271 Ga0495630_0069634 3300046517 Bacteria 2647
272 Ga0495652_0109964 3300046529 Bacteria 2218
273 Ga0495668_0002727 3300046616 Bacteria 14151
274 Ga0495649_0000990 3300046694 Bacteria 22404
275 Ga0495600_0109599 3300046809 Bacteria 1798
276 Ga0495672_0000269 3300047320 Bacteria 71899
277 Ga0495684_0162148 3300047471 Bacteria 1667
278 Ga0495686_0003416 3300047472 Bacteria 13807
279 Ga0495686_0111190 3300047472 Bacteria 1643
280 Ga0496101_0501124 3300048904 Bacteria 959
281 Ga0496106_0011364 3300048909 Bacteria 6590
282 Ga0496106_0034277 3300048909 Bacteria 3791
283 Ga0496106_0064796 3300048909 Bacteria 2781
284 Ga0496107_0000050 3300048910 Bacteria 63795
285 Ga0496109_0128186 3300048912 Bacteria 2367
286 Ga0496109_0334958 3300048912 Bacteria 1429
287 Ga0496110_0038874 3300048913 Bacteria 4142
288 Ga0496111_0163092 3300048914 Bacteria 1655
289 Ga0496114_0229447 3300048917 Bacteria 1631
290 Ga0496116_0025721 3300048919 Bacteria 4321
291 Ga0496116_0038548 3300048919 Bacteria 3316
292 Ga0496117_0004411 3300048920 Bacteria 15546
293 Ga0496119_0058176 3300048922 Bacteria 2331
294 Ga0496121_0001171 3300048924 Bacteria 46042
295 Ga0496121_0002939 3300048924 Bacteria 24918
296 Ga0496121_0041637 3300048924 Unclassified 4011
297 Ga0496121_0173075 3300048924 Bacteria 1566
298 Ga0496123_0006600 3300048926 Bacteria 11205
299 Ga0496123_0039956 3300048926 Bacteria 3276
300 Ga0496124_0007417 3300048927 Bacteria 11659
301 Ga0496124_0099737 3300048927 Bacteria 2355
302 Ga0496126_0002979 3300048929 Bacteria 21988
303 Ga0496126_0245130 3300048929 Bacteria 1495
304 Ga0501034_0293031 3300049571 Bacteria 1565
305 Ga0501068_0025487 3300049584 Bacteria 3478
306 Ga0501069_0011724 3300049585 Bacteria 4647
307 Ga0501073_0099245 3300049589 Unclassified 2022
308 Ga0501081_0035700 3300049743 Bacteria 3385
309 nmdc:mga07m45_111880_c1 3300050496 Unclassified 1573
310 nmdc:mga05p37_314036_c1 3300050507 Bacteria 1857
311 nmdc:mga08x19_28227_c1 3300050514 Bacteria 3513
312 Ga0495601_0006498 3300053077 Bacteria 6837
313 Ga0495619_0298877 3300053085 Bacteria 1115
314 Ga0500566_0088590 3300053094 Bacteria 1713
315 Ga0500616_0010328 3300053153 Bacteria 5593
316 Ga0500616_0019018 3300053153 Bacteria 3878
317 Ga0500616_0041542 3300053153 Bacteria 2467
318 Ga0500645_003693 3300053730 Bacteria 6103
319 Ga0466962_0000873 3300061719 Bacteria 13668
320 Ga0466962_0068251 3300061719 Bacteria 1698
321 Ga0530510_0258065 3300061734 Bacteria 1299

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039438 Ga0436360_1255897 Ga0436360_1255897_7184_8011 272
2 3300041413 Ga0439465_0001476 Ga0439465_0001476_1202_2095 289
3 3300048904 Ga0496101_0501124 Ga0496101_0501124_23_928 295
4 3300005937 Ga0081455_10204435 Ga0081455_102044352 299
5 3300049743 Ga0501081_0035700 Ga0501081_0035700_400_1377 303
6 3300048912 Ga0496109_0334958 Ga0496109_0334958_343_1383 306
7 3300053153 Ga0500616_0041542 Ga0500616_0041542_1506_2435 308
8 3300005356 Ga0070674_100034859 Ga0070674_1000348592 311
9 3300048909 Ga0496106_0034277 Ga0496106_0034277_1154_2104 315
10 3300048910 Ga0496107_0000050 Ga0496107_0000050_50622_51572 315
11 3300048924 Ga0496121_0001171 Ga0496121_0001171_5338_6288 315
12 3300045976 Ga0466967_0041417 Ga0466967_0041417_687_1664 316
13 3300046694 Ga0495649_0000990 Ga0495649_0000990_8932_9885 316
14 3300049585 Ga0501069_0011724 Ga0501069_0011724_2579_3556 316
15 3300050514 nmdc:mga08x19_28227_c1 nmdc:mga08x19_28227_c1_875_1852 316
16 3300006844 Ga0075428_100291949 Ga0075428_1002919492 317
17 3300009147 Ga0114129_10199141 Ga0114129_101991412 317
18 3300050507 nmdc:mga05p37_314036_c1 nmdc:mga05p37_314036_c1_558_1541 317
19 3300009545 Ga0105237_10306435 Ga0105237_103064352 324
20 iso_pu_bacteria 2511231028 2511399414 324
21 3300013102 Ga0157371_10026308 Ga0157371_100263082 325
22 3300044719 Ga0466971_0003231 Ga0466971_0003231_367_1413 325
23 3300047472 Ga0495686_0111190 Ga0495686_0111190_449_1435 325
24 iso_pu_bacteria 2869162929 2869163077 325
25 3300039450 Ga0436363_1060357 Ga0436363_1060357_1396_2388 327
26 3300053730 Ga0500645_003693 Ga0500645_003693_4602_5588 328
27 3300061734 Ga0530510_0258065 Ga0530510_0258065_47_1105 328
28 3300005347 Ga0070668_100026096 Ga0070668_1000260966 330
29 3300031852 Ga0307410_10078671 Ga0307410_100786711 330
30 3300031901 Ga0307406_10070677 Ga0307406_100706774 330
31 3300046809 Ga0495600_0109599 Ga0495600_0109599_157_1191 330
32 3300002067 JGI24735J21928_10026007 JGI24735J21928_100260073 331
33 3300005366 Ga0070659_100019850 Ga0070659_1000198504 331
34 3300009093 Ga0105240_10025860 Ga0105240_100258609 331
35 3300010375 Ga0105239_10006985 Ga0105239_100069859 331
36 3300025904 Ga0207647_10001428 Ga0207647_100014285 331
37 3300025904 Ga0207647_10032418 Ga0207647_100324183 331
38 3300025932 Ga0207690_10354812 Ga0207690_103548121 331
39 3300025933 Ga0207706_10033078 Ga0207706_100330784 331
40 3300025933 Ga0207706_10066542 Ga0207706_100665424 331
41 3300041462 Ga0451806_753049 Ga0451806_753049_1876_2874 331
42 3300042005 Ga0439448_0007660 Ga0439448_0007660_665_1663 331
43 3300042157 Ga0439458_0000388 Ga0439458_0000388_7725_8723 331
44 3300048927 Ga0496124_0099737 Ga0496124_0099737_838_1836 331
45 3300048929 Ga0496126_0245130 Ga0496126_0245130_429_1427 331
46 3300005458 Ga0070681_10219781 Ga0070681_102197812 332
47 3300005539 Ga0068853_100028040 Ga0068853_1000280402 332
48 3300005548 Ga0070665_100009625 Ga0070665_1000096259 332
49 3300005563 Ga0068855_100025811 Ga0068855_1000258116 332
50 3300005563 Ga0068855_100082761 Ga0068855_1000827612 332
51 3300009093 Ga0105240_10007910 Ga0105240_100079107 332
52 3300009093 Ga0105240_10057478 Ga0105240_100574785 332
53 3300009551 Ga0105238_10063389 Ga0105238_100633893 332
54 3300009551 Ga0105238_10087192 Ga0105238_100871924 332
55 3300013104 Ga0157370_10214553 Ga0157370_102145532 332
56 3300013105 Ga0157369_10159847 Ga0157369_101598473 332
57 3300025909 Ga0207705_10001339 Ga0207705_1000133915 332
58 3300025912 Ga0207707_10123723 Ga0207707_101237232 332
59 3300025912 Ga0207707_10201794 Ga0207707_102017942 332
60 3300025919 Ga0207657_10046770 Ga0207657_100467703 332
61 3300025921 Ga0207652_10019278 Ga0207652_100192784 332
62 3300025924 Ga0207694_10104429 Ga0207694_101044292 332
63 3300025949 Ga0207667_10243411 Ga0207667_102434112 332
64 3300026041 Ga0207639_10195246 Ga0207639_101952462 332
65 3300026116 Ga0207674_10042540 Ga0207674_100425401 332
66 3300028379 Ga0268266_10000975 Ga0268266_100009758 332
67 3300037418 Ga0395900_0101394 Ga0395900_0101394_963_1973 332
68 3300037466 Ga0395898_0026028 Ga0395898_0026028_3183_4193 332
69 3300045976 Ga0466967_0077585 Ga0466967_0077585_1476_2486 332
70 3300046616 Ga0495668_0002727 Ga0495668_0002727_1075_2085 332
71 3300048924 Ga0496121_0002939 Ga0496121_0002939_3670_4677 332
72 3300048924 Ga0496121_0173075 Ga0496121_0173075_541_1548 332
73 3300049589 Ga0501073_0099245 Ga0501073_0099245_927_1937 332
74 3300045049 Ga0466959_0149284 Ga0466959_0149284_504_1532 333
75 3300046517 Ga0495630_0069634 Ga0495630_0069634_255_1289 333
76 3300005445 Ga0070708_100087868 Ga0070708_1000878682 334
77 3300039437 Ga0436365_1191004 Ga0436365_1191004_2090_3121 334
78 iso_pu_bacteria 2643221643 2644239178 334
79 3300031911 Ga0307412_10163591 Ga0307412_101635912 335
80 3300048909 Ga0496106_0064796 Ga0496106_0064796_1549_2580 335
81 3300048912 Ga0496109_0128186 Ga0496109_0128186_946_1977 335
82 3300048913 Ga0496110_0038874 Ga0496110_0038874_2312_3343 335
83 3300048914 Ga0496111_0163092 Ga0496111_0163092_230_1261 335
84 3300048917 Ga0496114_0229447 Ga0496114_0229447_119_1150 335
85 iso_pu_bacteria 2643221634 2644194449 335
86 3300042012 Ga0439455_0027036 Ga0439455_0027036_274_1287 336
87 3300042157 Ga0439458_0011534 Ga0439458_0011534_851_1864 336
88 3300046514 Ga0495618_0056800 Ga0495618_0056800_40_1098 336
89 3300046529 Ga0495652_0109964 Ga0495652_0109964_1103_2161 336
90 3300047471 Ga0495684_0162148 Ga0495684_0162148_402_1460 336
91 3300053077 Ga0495601_0006498 Ga0495601_0006498_5719_6777 336
92 3300053085 Ga0495619_0298877 Ga0495619_0298877_24_1082 336
93 3300009094 Ga0111539_10148001 Ga0111539_101480012 337
94 3300014326 Ga0157380_10116524 Ga0157380_101165242 337
95 3300031731 Ga0307405_10020935 Ga0307405_100209354 337
96 3300031901 Ga0307406_10023314 Ga0307406_100233144 337
97 3300031995 Ga0307409_100011388 Ga0307409_1000113882 337
98 3300032002 Ga0307416_100011783 Ga0307416_1000117833 337
99 3300032004 Ga0307414_10012794 Ga0307414_100127944 337
100 3300032005 Ga0307411_10002758 Ga0307411_100027585 337
101 3300032126 Ga0307415_100015991 Ga0307415_1000159915 337
102 3300044684 Ga0466966_0224266 Ga0466966_0224266_12_1031 337
103 3300044694 Ga0466963_0056019 Ga0466963_0056019_901_1920 337
104 3300044765 Ga0466970_0000026 Ga0466970_0000026_1715_2734 337
105 3300044842 Ga0466957_0008982 Ga0466957_0008982_2114_3133 337
106 3300045836 Ga0466958_0098028 Ga0466958_0098028_93_1112 337
107 3300045976 Ga0466967_0107742 Ga0466967_0107742_729_1748 337
108 3300049584 Ga0501068_0025487 Ga0501068_0025487_426_1481 337
109 3300061719 Ga0466962_0068251 Ga0466962_0068251_285_1304 337
110 3300003781 Ga0055536_1015352 Ga0055536_10153522 338
111 3300006353 Ga0075370_10079842 Ga0075370_100798421 338
112 3300025284 Ga0209130_1006934 Ga0209130_10069341 338
113 3300044684 Ga0466966_0052311 Ga0466966_0052311_1355_2404 338
114 3300048909 Ga0496106_0011364 Ga0496106_0011364_4527_5552 338
115 3300048919 Ga0496116_0038548 Ga0496116_0038548_1172_2197 338
116 3300048924 Ga0496121_0041637 Ga0496121_0041637_236_1261 338
117 3300048926 Ga0496123_0006600 Ga0496123_0006600_6040_7065 338
118 3300048927 Ga0496124_0007417 Ga0496124_0007417_7682_8707 338
119 3300048929 Ga0496126_0002979 Ga0496126_0002979_6929_7954 338
120 3300050496 nmdc:mga07m45_111880_c1 nmdc:mga07m45_111880_c1_301_1326 338
121 3300046492 Ga0495585_0065789 Ga0495585_0065789_397_1425 339
122 3300053153 Ga0500616_0010328 Ga0500616_0010328_1862_2896 339
123 3300025254 Ga0209148_1001417 Ga0209148_10014178 340
124 3300025272 Ga0209455_1000767 Ga0209455_100076722 340
125 3300047320 Ga0495672_0000269 Ga0495672_0000269_65449_66477 340
126 3300005327 Ga0070658_10000062 Ga0070658_1000006278 341
127 3300005339 Ga0070660_100000377 Ga0070660_10000037729 341
128 3300006186 Ga0075369_10000022 Ga0075369_1000002243 341
129 3300010375 Ga0105239_10226192 Ga0105239_102261921 341
130 3300025254 Ga0209148_1000074 Ga0209148_1000074244 341
131 3300025909 Ga0207705_10000179 Ga0207705_1000017943 341
132 3300025919 Ga0207657_10000791 Ga0207657_1000079128 341
133 iso_pu_bacteria 2847930680 2847930949 341
134 iso_pu_bacteria 2885366525 2885371166 341
135 3300005355 Ga0070671_100006402 Ga0070671_1000064026 342
136 3300005366 Ga0070659_100041935 Ga0070659_1000419353 342
137 3300025931 Ga0207644_10013042 Ga0207644_100130426 342
138 3300025945 Ga0207679_10271285 Ga0207679_102712852 342
139 3300042005 Ga0439448_0010586 Ga0439448_0010586_981_2012 342
140 3300042012 Ga0439455_0000097 Ga0439455_0000097_3860_4891 342
141 3300047472 Ga0495686_0003416 Ga0495686_0003416_2783_3844 342
142 3300002075 JGI24738J21930_10000497 JGI24738J21930_1000049713 343
143 3300003316 rootH1_10062834 rootH1_100628342 343
144 3300003316 rootH1_10090639 rootH1_100906391 343
145 3300005335 Ga0070666_10045952 Ga0070666_100459524 343
146 3300005455 Ga0070663_100000285 Ga0070663_10000028529 343
147 3300005535 Ga0070684_100195745 Ga0070684_1001957452 343
148 3300005539 Ga0068853_100007016 Ga0068853_1000070168 343
149 3300005539 Ga0068853_100007657 Ga0068853_1000076579 343
150 3300005539 Ga0068853_100009007 Ga0068853_1000090072 343
151 3300005539 Ga0068853_100305147 Ga0068853_1003051472 343
152 3300005577 Ga0068857_100012795 Ga0068857_1000127953 343
153 3300005578 Ga0068854_100000265 Ga0068854_10000026539 343
154 3300005578 Ga0068854_100026801 Ga0068854_1000268012 343
155 3300005614 Ga0068856_100083524 Ga0068856_1000835244 343
156 3300005614 Ga0068856_100230717 Ga0068856_1002307172 343
157 3300005616 Ga0068852_100004651 Ga0068852_1000046516 343
158 3300005616 Ga0068852_100007006 Ga0068852_1000070064 343
159 3300005834 Ga0068851_10082736 Ga0068851_100827362 343
160 3300006237 Ga0097621_100014631 Ga0097621_1000146314 343
161 3300006358 Ga0068871_100030185 Ga0068871_1000301853 343
162 3300010375 Ga0105239_10038109 Ga0105239_100381096 343
163 3300010375 Ga0105239_10164294 Ga0105239_101642943 343
164 3300013100 Ga0157373_10105847 Ga0157373_101058472 343
165 3300013296 Ga0157374_10017476 Ga0157374_100174769 343
166 3300013307 Ga0157372_10177138 Ga0157372_101771383 343
167 3300025321 Ga0207656_10020223 Ga0207656_100202233 343
168 3300025909 Ga0207705_10023934 Ga0207705_100239344 343
169 3300025920 Ga0207649_10036910 Ga0207649_100369104 343
170 3300025924 Ga0207694_10014086 Ga0207694_100140865 343
171 3300025933 Ga0207706_10030633 Ga0207706_100306334 343
172 3300025937 Ga0207669_10030921 Ga0207669_100309213 343
173 3300025981 Ga0207640_10000139 Ga0207640_1000013934 343
174 3300025981 Ga0207640_10026347 Ga0207640_100263474 343
175 3300026041 Ga0207639_10006063 Ga0207639_100060638 343
176 3300026041 Ga0207639_10147124 Ga0207639_101471242 343
177 3300026067 Ga0207678_10000972 Ga0207678_1000097225 343
178 3300026078 Ga0207702_10030429 Ga0207702_100304295 343
179 3300026116 Ga0207674_10015150 Ga0207674_100151506 343
180 3300026142 Ga0207698_10000294 Ga0207698_100002949 343
181 3300026142 Ga0207698_10000899 Ga0207698_1000089916 343
182 3300031901 Ga0307406_10135659 Ga0307406_101356592 343
183 3300032002 Ga0307416_100208799 Ga0307416_1002087991 343
184 3300037471 Ga0395905_0065530 Ga0395905_0065530_627_1661 343
185 3300038443 Ga0395901_0318063 Ga0395901_0318063_288_1322 343
186 3300042012 Ga0439455_0000283 Ga0439455_0000283_4398_5432 343
187 3300042157 Ga0439458_0000367 Ga0439458_0000367_9886_10920 343
188 3300042157 Ga0439458_0030381 Ga0439458_0030381_153_1187 343
189 3300044658 Ga0466972_0002157 Ga0466972_0002157_3514_4548 343
190 3300044683 Ga0466965_0004934 Ga0466965_0004934_1587_2621 343
191 3300044684 Ga0466966_0027140 Ga0466966_0027140_1571_2605 343
192 3300044694 Ga0466963_0010040 Ga0466963_0010040_1285_2319 343
193 3300044735 Ga0466968_0013217 Ga0466968_0013217_1779_2813 343
194 3300044901 Ga0466960_0003121 Ga0466960_0003121_4510_5544 343
195 3300045049 Ga0466959_0027805 Ga0466959_0027805_3113_4147 343
196 3300045836 Ga0466958_0004137 Ga0466958_0004137_1322_2356 343
197 3300045836 Ga0466958_0075952 Ga0466958_0075952_481_1515 343
198 3300045976 Ga0466967_0015827 Ga0466967_0015827_1459_2493 343
199 3300048922 Ga0496119_0058176 Ga0496119_0058176_769_1809 343
200 3300048926 Ga0496123_0039956 Ga0496123_0039956_646_1686 343
201 3300049571 Ga0501034_0293031 Ga0501034_0293031_446_1486 343
202 3300061719 Ga0466962_0000873 Ga0466962_0000873_10947_11981 343
203 iso_pu_bacteria 2824704595 2824712764 343
204 3300005327 Ga0070658_10054609 Ga0070658_100546094 344
205 3300005336 Ga0070680_100108702 Ga0070680_1001087024 344
206 3300005339 Ga0070660_100223461 Ga0070660_1002234612 344
207 3300005458 Ga0070681_10128249 Ga0070681_101282494 344
208 3300005530 Ga0070679_100091124 Ga0070679_1000911242 344
209 3300005577 Ga0068857_100226998 Ga0068857_1002269982 344
210 3300009092 Ga0105250_10033167 Ga0105250_100331672 344
211 3300009551 Ga0105238_10224808 Ga0105238_102248082 344
212 3300025913 Ga0207695_10100005 Ga0207695_101000055 344
213 3300025928 Ga0207700_10310086 Ga0207700_103100862 344
214 3300025944 Ga0207661_10030257 Ga0207661_100302572 344
215 3300031911 Ga0307412_10091140 Ga0307412_100911403 344
216 3300032126 Ga0307415_100014599 Ga0307415_1000145994 344
217 3300005344 Ga0070661_100110188 Ga0070661_1001101883 345
218 3300005563 Ga0068855_100000683 Ga0068855_10000068348 345
219 3300009093 Ga0105240_10009338 Ga0105240_100093383 345
220 3300025913 Ga0207695_10049402 Ga0207695_100494023 345
221 3300025949 Ga0207667_10034461 Ga0207667_100344615 345
222 3300025981 Ga0207640_10095304 Ga0207640_100953042 345
223 3300031548 Ga0307408_100038721 Ga0307408_1000387213 345
224 3300031995 Ga0307409_100015878 Ga0307409_1000158787 345
225 3300032002 Ga0307416_100025456 Ga0307416_1000254563 345
226 3300032005 Ga0307411_10011423 Ga0307411_100114234 345
227 3300046507 Ga0495606_0002497 Ga0495606_0002497_8803_9846 345
228 3300001990 JGI24737J22298_10003708 JGI24737J22298_100037085 346
229 3300005339 Ga0070660_100318943 Ga0070660_1003189431 346
230 3300005577 Ga0068857_100195621 Ga0068857_1001956212 346
231 3300009174 Ga0105241_10061674 Ga0105241_100616744 346
232 3300009551 Ga0105238_10418451 Ga0105238_104184512 346
233 3300025911 Ga0207654_10003514 Ga0207654_100035145 346
234 3300025913 Ga0207695_10002292 Ga0207695_100022926 346
235 3300025914 Ga0207671_10003090 Ga0207671_1000309014 346
236 3300025924 Ga0207694_10002158 Ga0207694_100021587 346
237 3300026067 Ga0207678_10011285 Ga0207678_100112857 346
238 3300026142 Ga0207698_10010370 Ga0207698_100103706 346
239 3300031824 Ga0307413_10078539 Ga0307413_100785393 346
240 3300009545 Ga0105237_10064119 Ga0105237_100641195 348
241 3300005563 Ga0068855_100212375 Ga0068855_1002123752 349
242 3300053094 Ga0500566_0088590 Ga0500566_0088590_562_1614 349
243 3300053153 Ga0500616_0019018 Ga0500616_0019018_1747_2799 349
244 3300001990 JGI24737J22298_10023914 JGI24737J22298_100239143 350
245 3300003773 Ga0055537_1006901 Ga0055537_10069012 350
246 3300003792 Ga0055540_1000185 Ga0055540_100018528 350
247 3300003794 Ga0055531_10000088 Ga0055531_1000008877 350
248 3300005328 Ga0070676_10012883 Ga0070676_100128834 350
249 3300005366 Ga0070659_100009411 Ga0070659_1000094116 350
250 3300005543 Ga0070672_100232234 Ga0070672_1002322341 350
251 3300025263 Ga0209565_1000062 Ga0209565_1000062148 350
252 3300025292 Ga0209676_1000288 Ga0209676_100028827 350
253 3300025298 Ga0209050_1000001 Ga0209050_10000011604 350
254 3300025303 Ga0209051_1000209 Ga0209051_100020977 350
255 3300025304 Ga0209257_1000111 Ga0209257_1000111155 350
256 3300025907 Ga0207645_10107634 Ga0207645_101076342 350
257 3300025931 Ga0207644_10031557 Ga0207644_100315573 350
258 3300025932 Ga0207690_10010887 Ga0207690_100108874 350
259 3300025940 Ga0207691_10194719 Ga0207691_101947192 350
260 3300005338 Ga0068868_100013525 Ga0068868_1000135255 352
261 3300005367 Ga0070667_100038775 Ga0070667_1000387754 352
262 3300005618 Ga0068864_100105164 Ga0068864_1001051642 352
263 3300005840 Ga0068870_10060714 Ga0068870_100607143 352
264 3300005843 Ga0068860_100043584 Ga0068860_1000435845 352
265 3300006237 Ga0097621_100056526 Ga0097621_1000565262 352
266 3300006358 Ga0068871_100007136 Ga0068871_1000071367 352
267 3300009174 Ga0105241_10021942 Ga0105241_100219425 352
268 3300009551 Ga0105238_10007906 Ga0105238_100079068 352
269 3300011119 Ga0105246_10010790 Ga0105246_100107902 352
270 3300014325 Ga0163163_10021259 Ga0163163_100212592 352
271 3300025908 Ga0207643_10037521 Ga0207643_100375212 352
272 3300025911 Ga0207654_10007362 Ga0207654_100073622 352
273 3300025924 Ga0207694_10016492 Ga0207694_100164922 352
274 3300025986 Ga0207658_10026738 Ga0207658_100267382 352
275 3300026023 Ga0207677_10007293 Ga0207677_100072935 352
276 3300026095 Ga0207676_10039676 Ga0207676_100396762 352
277 3300026142 Ga0207698_10132165 Ga0207698_101321653 352
278 3300028381 Ga0268264_10039437 Ga0268264_100394375 352
279 3300001904 JGI24736J21556_1000169 JGI24736J21556_10001693 353
280 3300001979 JGI24740J21852_10006789 JGI24740J21852_100067895 353
281 3300001989 JGI24739J22299_10002364 JGI24739J22299_100023647 353
282 3300002074 JGI24748J21848_1000047 JGI24748J21848_100004739 353
283 3300002075 JGI24738J21930_10001803 JGI24738J21930_100018036 353
284 3300002239 JGI24034J26672_10000014 JGI24034J26672_10000014139 353
285 3300005327 Ga0070658_10020752 Ga0070658_100207522 353
286 3300005330 Ga0070690_100000004 Ga0070690_100000004107 353
287 3300005331 Ga0070670_100058334 Ga0070670_1000583343 353
288 3300005335 Ga0070666_10000011 Ga0070666_10000011111 353
289 3300005353 Ga0070669_100000009 Ga0070669_100000009148 353
290 3300005365 Ga0070688_100010189 Ga0070688_1000101894 353
291 3300005455 Ga0070663_100066160 Ga0070663_1000661603 353
292 3300005466 Ga0070685_10000970 Ga0070685_100009708 353
293 3300005544 Ga0070686_100000001 Ga0070686_100000001408 353
294 3300005548 Ga0070665_100000004 Ga0070665_100000004143 353
295 3300005577 Ga0068857_100284882 Ga0068857_1002848822 353
296 3300005616 Ga0068852_100112591 Ga0068852_1001125913 353
297 3300005617 Ga0068859_100028136 Ga0068859_1000281366 353
298 3300005719 Ga0068861_100009695 Ga0068861_1000096952 353
299 3300005834 Ga0068851_10022470 Ga0068851_100224702 353
300 3300005841 Ga0068863_100000010 Ga0068863_100000010176 353
301 3300005842 Ga0068858_100007787 Ga0068858_1000077872 353
302 3300005843 Ga0068860_100000030 Ga0068860_100000030149 353
303 3300005844 Ga0068862_100000421 Ga0068862_10000042138 353
304 3300006931 Ga0097620_100028136 Ga0097620_1000281366 353
305 3300009553 Ga0105249_10000016 Ga0105249_10000016150 353
306 3300014326 Ga0157380_10000586 Ga0157380_1000058618 353
307 3300014968 Ga0157379_10027722 Ga0157379_100277228 353
308 3300017792 Ga0163161_10000037 Ga0163161_100000375 353
309 3300025223 Ga0207672_1000427 Ga0207672_10004271 353
310 3300025903 Ga0207680_10000008 Ga0207680_10000008401 353
311 3300025909 Ga0207705_10013489 Ga0207705_100134893 353
312 3300025923 Ga0207681_10000020 Ga0207681_10000020131 353
313 3300025925 Ga0207650_10078800 Ga0207650_100788003 353
314 3300025931 Ga0207644_10000154 Ga0207644_1000015437 353
315 3300025941 Ga0207711_10018531 Ga0207711_100185316 353
316 3300025961 Ga0207712_10000009 Ga0207712_10000009401 353
317 3300025972 Ga0207668_10017063 Ga0207668_100170635 353
318 3300025986 Ga0207658_10021432 Ga0207658_100214325 353
319 3300026035 Ga0207703_10015934 Ga0207703_100159346 353
320 3300026041 Ga0207639_10100806 Ga0207639_101008062 353
321 3300026088 Ga0207641_10000333 Ga0207641_1000033311 353
322 3300026118 Ga0207675_100000652 Ga0207675_10000065228 353
323 3300026142 Ga0207698_10182182 Ga0207698_101821822 353
324 3300028379 Ga0268266_10000009 Ga0268266_10000009646 353
325 3300028380 Ga0268265_10000149 Ga0268265_1000014931 353
326 3300028381 Ga0268264_10000003 Ga0268264_100000031023 353
327 3300048919 Ga0496116_0025721 Ga0496116_0025721_193_1272 353
328 3300048920 Ga0496117_0004411 Ga0496117_0004411_4051_5130 353

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01068

DNA_ligase_A_M

ATP dependent DNA ligase domain

47

235

0.88

PF04679

DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

253

354

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rpw-assembly1.cif.gz_E archaeal dna ligase and heterotrimeric pcna in complex with adenylated dna 0.8329 14 209
7sx5-assembly1.cif.gz_A crystal structure of ligase i with nick duplexes containing mismatch a:c 0.7457 21 338
6p0a-assembly1.cif.gz_A human dna ligase 1 bound to an adenylated, dideoxy terminated dna nick with 2 mm mg2+ 0.7304 20 338
1x9n-assembly1.cif.gz_A crystal structure of human dna ligase i bound to 5'-adenylated, nicked dna 0.7288 14 338
7kr4-assembly1.cif.gz_A human dna ligase 1(e346a/e592a) bound to a nicked dna substrate control duplex 0.7283 21 338
ID Description Score Start End Superfamily
af_L0TDE1_8_201_3.30.470.30 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.9513 18 209 3.30.470.30
af_L0TDE1_8_201_3.30.470.30 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.937 18 209 3.30.470.30
af_L0TDE1_203_339_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8829 212 333 2.40.50.140
4eq5A02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.8532 18 207 3.30.470.30
af_P9WNV3_639_759_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8417 213 332 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A2U2J196-F1-model_v4 DNA ligase (ATP) (EC 6.5.1.1) 0.9781 15 337 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A436S515-F1-model_v4 ATP-dependent DNA ligase 0.9769 17 165 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A532B3Q8-F1-model_v4 ATP-dependent DNA ligase 0.9718 15 198 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A528WVU3-F1-model_v4 DNA ligase (ATP) (EC 6.5.1.1) 0.9714 15 337 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A2V5P8F7-F1-model_v4 ATP-dependent DNA ligase 0.9704 13 129 GO:0003910
GO:0005524
GO:0006281
GO:0006310

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pLDDT pTM Quality
84.44 0.71 High
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Predicted Structure (AlphaFold2)

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