F409172

General Info

Members Datasets Scaffolds Average Seq Length
328 188 656 148

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10006766|Ga0081538_1000676612
Length 170
Sequence VTAPLTHDPSETDLAMMRRALLAAENAANEGEVPVGAVVARGEEILAVAANEREATGDPTAHAELLAIRRASAATGGWRLTGCTLYATLEPCPMCAGAAHASRLSRLVYAAPDPKAGYAGTLHNTPADSRLNHTLIVESGLLEETAAALLRDFFQYRRQRTGKTPETPVL

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
111 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
112 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
113 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
114 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
125 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
126 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
127 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
128 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
129 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
130 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
131 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
139 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
140 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
141 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
142 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
143 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
144 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
145 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
146 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
147 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
148 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
149 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
150 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
151 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
152 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
153 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
154 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
155 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
156 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
157 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
158 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
159 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
160 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
161 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
162 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
163 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
164 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
179 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
180 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
184 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
185 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
187 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
188 2885427238 Sphingomonas mesophila SYSUP0001 Isolate Stem Tuber

Type Distribution

Type Percentage (%)
Metagenomes 99.39
Metatranscriptomes 0.3
Isolates 0.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.3
Nodule 0
Rhizoplane 3.96
Rhizosphere 94.82
Stem 0
Stem Tuber 0.3
Unclassified 3.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10006766 3300005981 Bacteria 10016
2 JGI24735J21928_10016603 3300002067 Bacteria 2282
3 Ga0065712_10089043 3300005290 Bacteria 2490
4 Ga0065715_10126536 3300005293 Bacteria 2106
5 Ga0070658_10002898 3300005327 Bacteria 14237
6 Ga0070658_10003679 3300005327 Bacteria 12553
7 Ga0070658_10135650 3300005327 Bacteria 2053
8 Ga0070658_10280421 3300005327 Bacteria 1418
9 Ga0070658_10655073 3300005327 Unclassified 911
10 Ga0070658_11106205 3300005327 Bacteria 689
11 Ga0070676_10636801 3300005328 Bacteria 772
12 Ga0070683_100143880 3300005329 Bacteria 2259
13 Ga0070670_100035136 3300005331 Bacteria 4314
14 Ga0070677_10250948 3300005333 Bacteria 878
15 Ga0070680_101133188 3300005336 Bacteria 676
16 Ga0070682_100213289 3300005337 Bacteria 1369
17 Ga0068868_100145968 3300005338 Bacteria 1945
18 Ga0068868_100448678 3300005338 Bacteria 1121
19 Ga0070660_100001678 3300005339 Bacteria 15200
20 Ga0070660_100003957 3300005339 Bacteria 10237
21 Ga0070660_100039554 3300005339 Bacteria 3585
22 Ga0070660_100074683 3300005339 Bacteria 2653
23 Ga0070689_101253279 3300005340 Bacteria 667
24 Ga0070661_100008513 3300005344 Bacteria 7096
25 Ga0070661_100284418 3300005344 Bacteria 1283
26 Ga0070692_10002459 3300005345 Bacteria 7202
27 Ga0070668_101066836 3300005347 Bacteria 728
28 Ga0070669_100048271 3300005353 Bacteria 3107
29 Ga0070669_100533323 3300005353 Bacteria 977
30 Ga0070675_100001714 3300005354 Bacteria 16191
31 Ga0070671_100195654 3300005355 Bacteria 1714
32 Ga0070671_100267022 3300005355 Bacteria 1454
33 Ga0070673_100000809 3300005364 Bacteria 17505
34 Ga0070673_100526600 3300005364 Bacteria 1072
35 Ga0070688_100059362 3300005365 Bacteria 2412
36 Ga0070659_100110841 3300005366 Bacteria 2215
37 Ga0070659_100261319 3300005366 Bacteria 1436
38 Ga0070667_100004953 3300005367 Bacteria 11156
39 Ga0070667_100054048 3300005367 Bacteria 3391
40 Ga0070663_100091328 3300005455 Bacteria 2256
41 Ga0070663_100102166 3300005455 Bacteria 2141
42 Ga0070663_101375540 3300005455 Bacteria 624
43 Ga0070678_101231404 3300005456 Bacteria 695
44 Ga0070662_100020049 3300005457 Bacteria 4550
45 Ga0070662_100312488 3300005457 Bacteria 1279
46 Ga0070662_101565215 3300005457 Bacteria 569
47 Ga0070681_10527177 3300005458 Bacteria 1095
48 Ga0068867_100058683 3300005459 Bacteria 2852
49 Ga0070679_100683985 3300005530 Bacteria 969
50 Ga0070684_100366551 3300005535 Bacteria 1326
51 Ga0070684_100368300 3300005535 Bacteria 1323
52 Ga0068853_100160507 3300005539 Bacteria 2028
53 Ga0068853_100814538 3300005539 Bacteria 894
54 Ga0070672_100000841 3300005543 Bacteria 18380
55 Ga0070672_100150372 3300005543 Bacteria 1926
56 Ga0070693_100042370 3300005547 Bacteria 2565
57 Ga0070665_100026887 3300005548 Bacteria 5795
58 Ga0070665_100099777 3300005548 Bacteria 2908
59 Ga0068855_100011032 3300005563 Bacteria 10904
60 Ga0068855_100072102 3300005563 Bacteria 4015
61 Ga0068855_100371928 3300005563 Bacteria 1571
62 Ga0070664_100001887 3300005564 Bacteria 16827
63 Ga0070664_100064303 3300005564 Bacteria 3129
64 Ga0070664_100380890 3300005564 Bacteria 1288
65 Ga0070664_100661556 3300005564 Bacteria 971
66 Ga0068857_101117888 3300005577 Unclassified 761
67 Ga0068857_101848162 3300005577 Unclassified 591
68 Ga0068854_100166357 3300005578 Bacteria 1712
69 Ga0068856_100146112 3300005614 Bacteria 2372
70 Ga0068856_100603282 3300005614 Bacteria 1119
71 Ga0068856_100929343 3300005614 Unclassified 888
72 Ga0068852_100047919 3300005616 Bacteria 3649
73 Ga0068864_100421939 3300005618 Bacteria 1271
74 Ga0068851_10419135 3300005834 Bacteria 790
75 Ga0068851_10486000 3300005834 Bacteria 738
76 Ga0068860_100440953 3300005843 Bacteria 1293
77 Ga0081538_10013506 3300005981 Bacteria 6459
78 Ga0097621_100212854 3300006237 Bacteria 1682
79 Ga0075370_10190388 3300006353 Bacteria 1209
80 Ga0075433_10190129 3300006852 Bacteria 1826
81 Ga0075429_100075014 3300006880 Bacteria 2946
82 Ga0105240_10139288 3300009093 Bacteria 2902
83 Ga0105240_10197938 3300009093 Bacteria 2357
84 Ga0105241_10976103 3300009174 Bacteria 791
85 Ga0105248_10001839 3300009177 Bacteria 23502
86 Ga0105248_10069062 3300009177 Bacteria 3967
87 Ga0105248_10107380 3300009177 Bacteria 3148
88 Ga0105248_11137137 3300009177 Bacteria 883
89 Ga0105237_10110066 3300009545 Bacteria 2746
90 Ga0105238_10071542 3300009551 Bacteria 3466
91 Ga0105249_10208787 3300009553 Bacteria 1915
92 Ga0157373_10057870 3300013100 Bacteria 2749
93 Ga0157373_10062139 3300013100 Bacteria 2645
94 Ga0157373_10117755 3300013100 Bacteria 1867
95 Ga0157373_10187169 3300013100 Unclassified 1458
96 Ga0157373_10236247 3300013100 Bacteria 1292
97 Ga0157373_11148623 3300013100 Bacteria 584
98 Ga0157371_10002645 3300013102 Bacteria 16988
99 Ga0157371_10003145 3300013102 Bacteria 15220
100 Ga0157371_10129493 3300013102 Bacteria 1795
101 Ga0157371_10292308 3300013102 Bacteria 1178
102 Ga0157371_10842795 3300013102 Bacteria 693
103 Ga0157370_10145149 3300013104 Bacteria 2210
104 Ga0157370_10256087 3300013104 Bacteria 1618
105 Ga0157370_10784123 3300013104 Bacteria 868
106 Ga0157369_10002448 3300013105 Bacteria 22283
107 Ga0157369_10011707 3300013105 Bacteria 9961
108 Ga0157369_10062983 3300013105 Bacteria 3996
109 Ga0157369_10215290 3300013105 Bacteria 2012
110 Ga0157369_10231910 3300013105 Bacteria 1930
111 Ga0157374_10003921 3300013296 Bacteria 12501
112 Ga0157372_10517430 3300013307 Bacteria 1391
113 Ga0157372_10825088 3300013307 Bacteria 1077
114 Ga0157375_10108900 3300013308 Bacteria 2866
115 Ga0157375_10952201 3300013308 Bacteria 1000
116 Ga0163163_10406978 3300014325 Bacteria 1419
117 Ga0157380_10099071 3300014326 Bacteria 2423
118 Ga0157377_10310627 3300014745 Bacteria 1044
119 Ga0157376_10458884 3300014969 Bacteria 1244
120 Ga0157376_10509436 3300014969 Bacteria 1184
121 Ga0206353_11625373 3300020082 Bacteria 1005
122 Ga0213875_10009679 3300021388 Bacteria 4867
123 Ga0207656_10085151 3300025321 Bacteria 1427
124 Ga0207696_1005162 3300025711 Bacteria 5472
125 Ga0207682_10023222 3300025893 Bacteria 2448
126 Ga0207680_10043543 3300025903 Bacteria 2634
127 Ga0207647_10042753 3300025904 Bacteria 2840
128 Ga0207645_10009350 3300025907 Bacteria 6786
129 Ga0207705_10003269 3300025909 Bacteria 12336
130 Ga0207705_10018368 3300025909 Bacteria 5001
131 Ga0207705_10040075 3300025909 Bacteria 3358
132 Ga0207705_10056086 3300025909 Bacteria 2840
133 Ga0207705_10506564 3300025909 Unclassified 938
134 Ga0207695_10034062 3300025913 Bacteria 5546
135 Ga0207695_10099439 3300025913 Bacteria 2906
136 Ga0207671_10075094 3300025914 Bacteria 2527
137 Ga0207660_10194006 3300025917 Bacteria 1583
138 Ga0207657_10002530 3300025919 Bacteria 19780
139 Ga0207657_10004324 3300025919 Bacteria 15053
140 Ga0207657_10005603 3300025919 Bacteria 13110
141 Ga0207657_10010101 3300025919 Bacteria 9439
142 Ga0207657_10496197 3300025919 Bacteria 957
143 Ga0207649_10085555 3300025920 Bacteria 2052
144 Ga0207649_10137841 3300025920 Bacteria 1666
145 Ga0207649_10320944 3300025920 Bacteria 1138
146 Ga0207649_11511703 3300025920 Unclassified 531
147 Ga0207652_10836860 3300025921 Bacteria 815
148 Ga0207681_10043305 3300025923 Bacteria 3012
149 Ga0207650_10005171 3300025925 Bacteria 8904
150 Ga0207650_10037001 3300025925 Bacteria 3554
151 Ga0207650_10462502 3300025925 Bacteria 1057
152 Ga0207659_10001712 3300025926 Bacteria 13017
153 Ga0207659_10045407 3300025926 Bacteria 3097
154 Ga0207659_10442703 3300025926 Bacteria 1093
155 Ga0207664_10437815 3300025929 Bacteria 1166
156 Ga0207644_10095659 3300025931 Bacteria 2221
157 Ga0207644_10148430 3300025931 Bacteria 1812
158 Ga0207644_10885062 3300025931 Bacteria 748
159 Ga0207690_10058394 3300025932 Bacteria 2610
160 Ga0207706_10019840 3300025933 Bacteria 6042
161 Ga0207706_10025933 3300025933 Bacteria 5248
162 Ga0207706_10033249 3300025933 Bacteria 4591
163 Ga0207706_10034059 3300025933 Bacteria 4532
164 Ga0207706_10901150 3300025933 Bacteria 747
165 Ga0207670_11188337 3300025936 Bacteria 645
166 Ga0207691_10003611 3300025940 Bacteria 15032
167 Ga0207691_10156311 3300025940 Bacteria 2002
168 Ga0207691_10490324 3300025940 Bacteria 1044
169 Ga0207711_10086839 3300025941 Bacteria 2743
170 Ga0207711_11371890 3300025941 Bacteria 649
171 Ga0207661_10841771 3300025944 Bacteria 845
172 Ga0207661_11053379 3300025944 Bacteria 749
173 Ga0207679_10017663 3300025945 Bacteria 4762
174 Ga0207679_10029999 3300025945 Bacteria 3793
175 Ga0207679_10282436 3300025945 Bacteria 1424
176 Ga0207679_10311220 3300025945 Bacteria 1361
177 Ga0207679_10627056 3300025945 Bacteria 971
178 Ga0207667_10002562 3300025949 Bacteria 22613
179 Ga0207667_10029121 3300025949 Bacteria 5991
180 Ga0207667_10188915 3300025949 Bacteria 2114
181 Ga0207651_10003443 3300025960 Bacteria 7775
182 Ga0207668_10558422 3300025972 Bacteria 993
183 Ga0207668_11079257 3300025972 Bacteria 719
184 Ga0207640_10002571 3300025981 Bacteria 9725
185 Ga0207640_10035295 3300025981 Bacteria 3128
186 Ga0207658_10094285 3300025986 Bacteria 2329
187 Ga0207658_10375072 3300025986 Bacteria 1245
188 Ga0207677_10754294 3300026023 Bacteria 868
189 Ga0207678_10022196 3300026067 Bacteria 5562
190 Ga0207678_10031191 3300026067 Bacteria 4650
191 Ga0207678_10090297 3300026067 Bacteria 2618
192 Ga0207702_10007162 3300026078 Bacteria 9545
193 Ga0207702_10042610 3300026078 Bacteria 3808
194 Ga0207702_10823239 3300026078 Bacteria 918
195 Ga0207641_10192633 3300026088 Bacteria 1875
196 Ga0207641_10832171 3300026088 Bacteria 914
197 Ga0207648_10079106 3300026089 Bacteria 2868
198 Ga0207676_10230513 3300026095 Bacteria 1655
199 Ga0207674_10227942 3300026116 Bacteria 1811
200 Ga0207674_11331185 3300026116 Unclassified 688
201 Ga0207675_100045558 3300026118 Bacteria 4098
202 Ga0207683_10667564 3300026121 Bacteria 963
203 Ga0207698_10007246 3300026142 Bacteria 6949
204 Ga0207698_10023288 3300026142 Bacteria 4323
205 Ga0207698_10244284 3300026142 Bacteria 1638
206 Ga0207698_10905554 3300026142 Bacteria 889
207 Ga0268266_10121170 3300028379 Bacteria 2328
208 Ga0268266_10359158 3300028379 Bacteria 1370
209 Ga0268264_10468403 3300028381 Bacteria 1223
210 Ga0265337_1181365 3300028556 Bacteria 571
211 Ga0265319_1268346 3300028563 Bacteria 519
212 Ga0265334_10041665 3300028573 Bacteria 1794
213 Ga0265323_10055477 3300028653 Bacteria 1392
214 Ga0265336_10013502 3300028666 Bacteria 2722
215 Ga0307408_100011194 3300031548 Bacteria 5925
216 Ga0307408_100947655 3300031548 Bacteria 790
217 Ga0307413_10478104 3300031824 Bacteria 995
218 Ga0307410_10108974 3300031852 Bacteria 2001
219 Ga0307406_10030166 3300031901 Bacteria 3290
220 Ga0307406_10504007 3300031901 Bacteria 982
221 Ga0307406_10555739 3300031901 Bacteria 940
222 Ga0307407_10207249 3300031903 Bacteria 1318
223 Ga0307412_10938276 3300031911 Bacteria 761
224 Ga0307409_100276657 3300031995 Bacteria 1549
225 Ga0307409_100448841 3300031995 Bacteria 1244
226 Ga0307409_100842874 3300031995 Bacteria 927
227 Ga0307409_101020490 3300031995 Bacteria 846
228 Ga0307416_100102837 3300032002 Bacteria 2492
229 Ga0307416_100378848 3300032002 Bacteria 1444
230 Ga0307416_100429530 3300032002 Bacteria 1368
231 Ga0307414_10007028 3300032004 Bacteria 6309
232 Ga0307414_10177462 3300032004 Bacteria 1710
233 Ga0307414_11509286 3300032004 Bacteria 625
234 Ga0307411_11367220 3300032005 Bacteria 647
235 Ga0307415_100087078 3300032126 Bacteria 2249
236 Ga0307415_100143754 3300032126 Bacteria 1826
237 Ga0307415_100688409 3300032126 Bacteria 921
238 Ga0373938_0128975 3300034957 Bacteria 658
239 Ga0373954_0024554 3300035118 Bacteria 2749
240 Ga0373956_0030242 3300035119 Bacteria 2366
241 Ga0373955_0014144 3300035172 Bacteria 3875
242 Ga0373935_0714167 3300035692 Bacteria 737
243 Ga0373937_0104207 3300036401 Bacteria 2635
244 Ga0395899_0003836 3300037312 Bacteria 11861
245 Ga0395899_0036767 3300037312 Bacteria 3671
246 Ga0395899_0510457 3300037312 Bacteria 778
247 Ga0395900_0030442 3300037418 Bacteria 5542
248 Ga0395900_0075456 3300037418 Bacteria 3466
249 Ga0395900_0116252 3300037418 Bacteria 2745
250 Ga0395900_0380443 3300037418 Bacteria 1379
251 Ga0395900_0729692 3300037418 Bacteria 922
252 Ga0395900_1200775 3300037418 Bacteria 674
253 Ga0395898_0052095 3300037466 Bacteria 3999
254 Ga0395898_0103566 3300037466 Bacteria 2730
255 Ga0395898_0330126 3300037466 Bacteria 1454
256 Ga0395905_0027272 3300037471 Bacteria 5387
257 Ga0395905_0067881 3300037471 Bacteria 3340
258 Ga0395905_0418243 3300037471 Bacteria 1236
259 Ga0436364_1177049 3300037853 Bacteria 2853
260 Ga0395901_0158917 3300038443 Bacteria 2373
261 Ga0395901_0313568 3300038443 Bacteria 1624
262 Ga0395901_0523344 3300038443 Bacteria 1204
263 Ga0439449_0185420 3300042007 Unclassified 778
264 Ga0450905_057541 3300042142 Bacteria 644
265 Ga0439458_0016912 3300042157 Bacteria 1661
266 Ga0451577_0590417 3300042876 Bacteria 1008
267 Ga0466969_0016395 3300044656 Bacteria 3876
268 Ga0466965_0556230 3300044683 Bacteria 648
269 Ga0466966_0000041 3300044684 Bacteria 97092
270 Ga0466966_0015306 3300044684 Bacteria 5073
271 Ga0466966_0107921 3300044684 Bacteria 1717
272 Ga0466961_0042009 3300044693 Bacteria 2931
273 Ga0466961_0208340 3300044693 Bacteria 1207
274 Ga0466963_0010429 3300044694 Bacteria 5625
275 Ga0466963_0021713 3300044694 Bacteria 4054
276 Ga0466963_0068249 3300044694 Bacteria 2387
277 Ga0466971_0009788 3300044719 Bacteria 4183
278 Ga0466971_0036298 3300044719 Bacteria 2211
279 Ga0466957_0000822 3300044842 Bacteria 15824
280 Ga0466957_0598718 3300044842 Unclassified 771
281 Ga0466957_0882207 3300044842 Bacteria 639
282 Ga0466958_0034825 3300045836 Bacteria 3005
283 Ga0466967_0030904 3300045976 Bacteria 4500
284 Ga0495582_0613142 3300046473 Bacteria 630
285 Ga0495585_0028542 3300046492 Bacteria 3182
286 Ga0495663_0056438 3300046525 Bacteria 1226
287 Ga0495586_0007161 3300046535 Bacteria 5946
288 Ga0495598_0000646 3300046537 Bacteria 6557
289 Ga0495621_0018348 3300046539 Bacteria 2271
290 Ga0495633_0001586 3300046558 Bacteria 17299
291 Ga0495661_0027381 3300046665 Bacteria 3660
292 Ga0495669_0003892 3300046684 Bacteria 6142
293 Ga0495670_0051791 3300046691 Bacteria 2054
294 Ga0495677_0003591 3300047445 Bacteria 6016
295 Ga0495677_0047549 3300047445 Bacteria 1575
296 Ga0496100_1351859 3300048903 Bacteria 562
297 Ga0496101_0446881 3300048904 Bacteria 1020
298 Ga0496107_0197821 3300048910 Bacteria 1494
299 Ga0496107_0462472 3300048910 Unclassified 942
300 Ga0496107_0805023 3300048910 Bacteria 688
301 Ga0496107_0921572 3300048910 Bacteria 636
302 Ga0496108_0386897 3300048911 Bacteria 1221
303 Ga0496109_0066740 3300048912 Bacteria 3295
304 Ga0496109_1335082 3300048912 Bacteria 653
305 Ga0496110_0013790 3300048913 Bacteria 6695
306 Ga0496111_0009671 3300048914 Bacteria 6444
307 Ga0496112_0014636 3300048915 Bacteria 7289
308 Ga0496114_0362676 3300048917 Bacteria 1282
309 Ga0501290_041182 3300049513 Bacteria 693
310 Ga0501032_0770084 3300049569 Bacteria 608
311 Ga0501033_0248751 3300049570 Bacteria 1260
312 Ga0501033_0854124 3300049570 Bacteria 613
313 Ga0501034_0980812 3300049571 Bacteria 730
314 Ga0501037_0213248 3300049573 Bacteria 1361
315 Ga0501038_0071118 3300049574 Bacteria 2952
316 Ga0501038_0774541 3300049574 Bacteria 714
317 Ga0501041_0901885 3300049577 Bacteria 568
318 Ga0501071_0755629 3300049587 Bacteria 749
319 Ga0501079_0740360 3300049741 Bacteria 774
320 Ga0501271_014800 3300049768 Bacteria 867
321 nmdc:mga09592_65461_c1 3300050508 Bacteria 3079
322 nmdc:mga0n895_1267717_c1 3300050512 Bacteria 709
323 Ga0590071_009347 3300059421 Bacteria 2302
324 Ga0590075_001382 3300059424 Bacteria 6084
325 Ga0590077_002032 3300059426 Bacteria 4438
326 Ga0466962_0348800 3300061719 Bacteria 737
327 Ga0530510_0025323 3300061734 Bacteria 4241
328 2885429059 2885427238 Bacteria 2291351
329 Ga0081538_10006766
330 JGI24735J21928_10016603
331 Ga0065712_10089043
332 Ga0065715_10126536
333 Ga0070658_10002898
334 Ga0070658_10003679
335 Ga0070658_10135650
336 Ga0070658_10280421
337 Ga0070658_10655073
338 Ga0070658_11106205
339 Ga0070676_10636801
340 Ga0070683_100143880
341 Ga0070670_100035136
342 Ga0070677_10250948
343 Ga0070680_101133188
344 Ga0070682_100213289
345 Ga0068868_100145968
346 Ga0068868_100448678
347 Ga0070660_100001678
348 Ga0070660_100003957
349 Ga0070660_100039554
350 Ga0070660_100074683
351 Ga0070689_101253279
352 Ga0070661_100008513
353 Ga0070661_100284418
354 Ga0070692_10002459
355 Ga0070668_101066836
356 Ga0070669_100048271
357 Ga0070669_100533323
358 Ga0070675_100001714
359 Ga0070671_100195654
360 Ga0070671_100267022
361 Ga0070673_100000809
362 Ga0070673_100526600
363 Ga0070688_100059362
364 Ga0070659_100110841
365 Ga0070659_100261319
366 Ga0070667_100004953
367 Ga0070667_100054048
368 Ga0070663_100091328
369 Ga0070663_100102166
370 Ga0070663_101375540
371 Ga0070678_101231404
372 Ga0070662_100020049
373 Ga0070662_100312488
374 Ga0070662_101565215
375 Ga0070681_10527177
376 Ga0068867_100058683
377 Ga0070679_100683985
378 Ga0070684_100366551
379 Ga0070684_100368300
380 Ga0068853_100160507
381 Ga0068853_100814538
382 Ga0070672_100000841
383 Ga0070672_100150372
384 Ga0070693_100042370
385 Ga0070665_100026887
386 Ga0070665_100099777
387 Ga0068855_100011032
388 Ga0068855_100072102
389 Ga0068855_100371928
390 Ga0070664_100001887
391 Ga0070664_100064303
392 Ga0070664_100380890
393 Ga0070664_100661556
394 Ga0068857_101117888
395 Ga0068857_101848162
396 Ga0068854_100166357
397 Ga0068856_100146112
398 Ga0068856_100603282
399 Ga0068856_100929343
400 Ga0068852_100047919
401 Ga0068864_100421939
402 Ga0068851_10419135
403 Ga0068851_10486000
404 Ga0068860_100440953
405 Ga0081538_10013506
406 Ga0097621_100212854
407 Ga0075370_10190388
408 Ga0075433_10190129
409 Ga0075429_100075014
410 Ga0105240_10139288
411 Ga0105240_10197938
412 Ga0105241_10976103
413 Ga0105248_10001839
414 Ga0105248_10069062
415 Ga0105248_10107380
416 Ga0105248_11137137
417 Ga0105237_10110066
418 Ga0105238_10071542
419 Ga0105249_10208787
420 Ga0157373_10057870
421 Ga0157373_10062139
422 Ga0157373_10117755
423 Ga0157373_10187169
424 Ga0157373_10236247
425 Ga0157373_11148623
426 Ga0157371_10002645
427 Ga0157371_10003145
428 Ga0157371_10129493
429 Ga0157371_10292308
430 Ga0157371_10842795
431 Ga0157370_10145149
432 Ga0157370_10256087
433 Ga0157370_10784123
434 Ga0157369_10002448
435 Ga0157369_10011707
436 Ga0157369_10062983
437 Ga0157369_10215290
438 Ga0157369_10231910
439 Ga0157374_10003921
440 Ga0157372_10517430
441 Ga0157372_10825088
442 Ga0157375_10108900
443 Ga0157375_10952201
444 Ga0163163_10406978
445 Ga0157380_10099071
446 Ga0157377_10310627
447 Ga0157376_10458884
448 Ga0157376_10509436
449 Ga0206353_11625373
450 Ga0213875_10009679
451 Ga0207656_10085151
452 Ga0207696_1005162
453 Ga0207682_10023222
454 Ga0207680_10043543
455 Ga0207647_10042753
456 Ga0207645_10009350
457 Ga0207705_10003269
458 Ga0207705_10018368
459 Ga0207705_10040075
460 Ga0207705_10056086
461 Ga0207705_10506564
462 Ga0207695_10034062
463 Ga0207695_10099439
464 Ga0207671_10075094
465 Ga0207660_10194006
466 Ga0207657_10002530
467 Ga0207657_10004324
468 Ga0207657_10005603
469 Ga0207657_10010101
470 Ga0207657_10496197
471 Ga0207649_10085555
472 Ga0207649_10137841
473 Ga0207649_10320944
474 Ga0207649_11511703
475 Ga0207652_10836860
476 Ga0207681_10043305
477 Ga0207650_10005171
478 Ga0207650_10037001
479 Ga0207650_10462502
480 Ga0207659_10001712
481 Ga0207659_10045407
482 Ga0207659_10442703
483 Ga0207664_10437815
484 Ga0207644_10095659
485 Ga0207644_10148430
486 Ga0207644_10885062
487 Ga0207690_10058394
488 Ga0207706_10019840
489 Ga0207706_10025933
490 Ga0207706_10033249
491 Ga0207706_10034059
492 Ga0207706_10901150
493 Ga0207670_11188337
494 Ga0207691_10003611
495 Ga0207691_10156311
496 Ga0207691_10490324
497 Ga0207711_10086839
498 Ga0207711_11371890
499 Ga0207661_10841771
500 Ga0207661_11053379
501 Ga0207679_10017663
502 Ga0207679_10029999
503 Ga0207679_10282436
504 Ga0207679_10311220
505 Ga0207679_10627056
506 Ga0207667_10002562
507 Ga0207667_10029121
508 Ga0207667_10188915
509 Ga0207651_10003443
510 Ga0207668_10558422
511 Ga0207668_11079257
512 Ga0207640_10002571
513 Ga0207640_10035295
514 Ga0207658_10094285
515 Ga0207658_10375072
516 Ga0207677_10754294
517 Ga0207678_10022196
518 Ga0207678_10031191
519 Ga0207678_10090297
520 Ga0207702_10007162
521 Ga0207702_10042610
522 Ga0207702_10823239
523 Ga0207641_10192633
524 Ga0207641_10832171
525 Ga0207648_10079106
526 Ga0207676_10230513
527 Ga0207674_10227942
528 Ga0207674_11331185
529 Ga0207675_100045558
530 Ga0207683_10667564
531 Ga0207698_10007246
532 Ga0207698_10023288
533 Ga0207698_10244284
534 Ga0207698_10905554
535 Ga0268266_10121170
536 Ga0268266_10359158
537 Ga0268264_10468403
538 Ga0265337_1181365
539 Ga0265319_1268346
540 Ga0265334_10041665
541 Ga0265323_10055477
542 Ga0265336_10013502
543 Ga0307408_100011194
544 Ga0307408_100947655
545 Ga0307413_10478104
546 Ga0307410_10108974
547 Ga0307406_10030166
548 Ga0307406_10504007
549 Ga0307406_10555739
550 Ga0307407_10207249
551 Ga0307412_10938276
552 Ga0307409_100276657
553 Ga0307409_100448841
554 Ga0307409_100842874
555 Ga0307409_101020490
556 Ga0307416_100102837
557 Ga0307416_100378848
558 Ga0307416_100429530
559 Ga0307414_10007028
560 Ga0307414_10177462
561 Ga0307414_11509286
562 Ga0307411_11367220
563 Ga0307415_100087078
564 Ga0307415_100143754
565 Ga0307415_100688409
566 Ga0373938_0128975
567 Ga0373954_0024554
568 Ga0373956_0030242
569 Ga0373955_0014144
570 Ga0373935_0714167
571 Ga0373937_0104207
572 Ga0395899_0003836
573 Ga0395899_0036767
574 Ga0395899_0510457
575 Ga0395900_0030442
576 Ga0395900_0075456
577 Ga0395900_0116252
578 Ga0395900_0380443
579 Ga0395900_0729692
580 Ga0395900_1200775
581 Ga0395898_0052095
582 Ga0395898_0103566
583 Ga0395898_0330126
584 Ga0395905_0027272
585 Ga0395905_0067881
586 Ga0395905_0418243
587 Ga0436364_1177049
588 Ga0395901_0158917
589 Ga0395901_0313568
590 Ga0395901_0523344
591 Ga0439449_0185420
592 Ga0450905_057541
593 Ga0439458_0016912
594 Ga0451577_0590417
595 Ga0466969_0016395
596 Ga0466965_0556230
597 Ga0466966_0000041
598 Ga0466966_0015306
599 Ga0466966_0107921
600 Ga0466961_0042009
601 Ga0466961_0208340
602 Ga0466963_0010429
603 Ga0466963_0021713
604 Ga0466963_0068249
605 Ga0466971_0009788
606 Ga0466971_0036298
607 Ga0466957_0000822
608 Ga0466957_0598718
609 Ga0466957_0882207
610 Ga0466958_0034825
611 Ga0466967_0030904
612 Ga0495582_0613142
613 Ga0495585_0028542
614 Ga0495663_0056438
615 Ga0495586_0007161
616 Ga0495598_0000646
617 Ga0495621_0018348
618 Ga0495633_0001586
619 Ga0495661_0027381
620 Ga0495669_0003892
621 Ga0495670_0051791
622 Ga0495677_0003591
623 Ga0495677_0047549
624 Ga0496100_1351859
625 Ga0496101_0446881
626 Ga0496107_0197821
627 Ga0496107_0462472
628 Ga0496107_0805023
629 Ga0496107_0921572
630 Ga0496108_0386897
631 Ga0496109_0066740
632 Ga0496109_1335082
633 Ga0496110_0013790
634 Ga0496111_0009671
635 Ga0496112_0014636
636 Ga0496114_0362676
637 Ga0501290_041182
638 Ga0501032_0770084
639 Ga0501033_0248751
640 Ga0501033_0854124
641 Ga0501034_0980812
642 Ga0501037_0213248
643 Ga0501038_0071118
644 Ga0501038_0774541
645 Ga0501041_0901885
646 Ga0501071_0755629
647 Ga0501079_0740360
648 Ga0501271_014800
649 nmdc:mga09592_65461_c1
650 nmdc:mga0n895_1267717_c1
651 Ga0590071_009347
652 Ga0590075_001382
653 Ga0590077_002032
654 Ga0466962_0348800
655 Ga0530510_0025323
656 2885429059

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

10

111

0.96

PF14437

MafB19-deam

MafB19-like deaminase

11

158

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2a8n-assembly1.cif.gz_B biochemical and structural studies of a-to-i editing by trna:a34 deaminases at the wobble position of transfer rna 0.9904 8 142
2a8n-assembly1.cif.gz_A biochemical and structural studies of a-to-i editing by trna:a34 deaminases at the wobble position of transfer rna 0.9881 8 132
3ocq-assembly1.cif.gz_A-2 crystal structure of trna-specific adenosine deaminase from salmonella enterica 0.9835 8 147
2b3j-assembly2.cif.gz_D crystal structure of staphylococcus aureus trna adenosine deaminase, tada, in complex with rna 0.9788 8 150
1wwr-assembly1.cif.gz_A crystal structure of trna adenosine deaminase tada from aquifex aeolicus 0.9715 8 150
ID Description Score Start End Superfamily
af_I1KSW4_189_341_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9987 27 40 2.60.40.10
af_A0A1D6PV52_1_75_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9912 44 103 3.40.140.10
2a8nA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9881 8 132 3.40.140.10
2b3jA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9784 8 150 3.40.140.10
af_A0A1D6ELV0_114_227_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9734 9 104 3.40.140.10
ID Description Score Start End GO Terms
AF-M4RYQ1-F1-model_v4 tRNA-specific adenosine deaminase (EC 3.5.4.33) 0.9999 9 150 GO:0002100
GO:0008270
GO:0052717
AF-A0A7T8XVG8-F1-model_v4 deleted 0.9985 9 150
AF-A0A258RII7-F1-model_v4 tRNA-specific adenosine deaminase (EC 3.5.4.33) 0.9981 3 150 GO:0002100
GO:0008270
GO:0052717
AF-A0A0F7KUI0-F1-model_v4 tRNA-specific adenosine deaminase (EC 3.5.4.33) 0.9981 9 150 GO:0002100
GO:0008270
GO:0052717
AF-A0A7S9Z836-F1-model_v4 tRNA-specific adenosine deaminase (EC 3.5.4.33) 0.9974 9 150 GO:0002100
GO:0008270
GO:0052717

Map