F408792

General Info

Members Datasets Scaffolds Average Seq Length
327 162 654 352

Family's Representative Sequence

Representative Sequence 3300014968|Ga0157379_10048500|Ga0157379_100485002
Length 426
Sequence LNAILEAPTYRRFAVSCAAMAQSVDKPAHSKVVEKNLLKCGKSIYYSARPTLPESSKHSPRVAAYRSVAVVSPEEVLMKLIPTAVKVFLPLLILAVMVGGYLISPALPQTRERTVTASSTEANIKVADTIKTDVDLVTIDALVLQKNTARVVGSLKQQDFQISEDGTRQTITHFSQDSLPLSVILLIDRGGCLDPFGQEVRRAAMDALSRLKPTDEIAVMTYDDTVELRQGFTRDRRLLELALRYVPEHNEQANHCLNTVFDEAANYMMQAGNPSGRRVIIPITGVTRNWDCRNGPSHNAAIHSVFESGSVVSAIIPKTPEQVAENGMMRWATRLGRVGGVQYLDIQKLADETGGEVLRDKPEELDQTFNTLITHLRTRYSFSFVSTNKKRDGTVRKLKIDVADGVEKSQGKLVVKARRSYVAPKS

Samples

Sample ID Description Type Environment
1 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
4 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
41 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
52 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
66 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
76 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
77 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
78 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
79 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
80 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
83 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
87 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
128 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
137 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
140 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
141 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
142 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
143 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
144 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
145 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
146 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
147 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
148 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
149 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
150 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
151 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
152 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
153 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
154 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
155 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.69
Stem 0
Stem Tuber 0
Unclassified 17.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157379_10048500 3300014968 Viruses 3790
2 SwRhRL3b_contig_375620 2162886006 Eukaryota 1921
3 JGI24748J21848_1000014 3300002074 Bacteria 147126
4 JGI24034J26672_10000012 3300002239 Bacteria 146139
5 JGI24751J29686_10000111 3300002459 Bacteria 42772
6 rootL2_10119037 3300003322 Bacteria 8595
7 Ga0065714_10064441 3300005288 Bacteria 101256
8 Ga0065712_10000007 3300005290 Bacteria 101903
9 Ga0065712_10002058 3300005290 Bacteria 9911
10 Ga0065715_10004236 3300005293 Unclassified 3972
11 Ga0065715_10089157 3300005293 Bacteria 13378
12 Ga0065715_10090386 3300005293 Bacteria 7109
13 Ga0065715_10113346 3300005293 Bacteria 2494
14 Ga0065715_10221215 3300005293 Bacteria 1248
15 Ga0065707_10023393 3300005295 Unclassified 1475
16 Ga0065707_10106751 3300005295 Bacteria 2565
17 Ga0070676_10059019 3300005328 Bacteria 2275
18 Ga0070670_100000216 3300005331 Bacteria 53372
19 Ga0070670_100116753 3300005331 Bacteria 2301
20 Ga0070670_100372784 3300005331 Unclassified 1257
21 Ga0068869_100009099 3300005334 Bacteria 6435
22 Ga0068869_100021211 3300005334 Bacteria 4466
23 Ga0068869_100035822 3300005334 Bacteria 3520
24 Ga0068869_100122817 3300005334 Bacteria 1988
25 Ga0068869_100206902 3300005334 Unclassified 1550
26 Ga0070666_10024868 3300005335 Bacteria 3903
27 Ga0070680_100095318 3300005336 Bacteria 2467
28 Ga0070682_100005991 3300005337 Bacteria 6804
29 Ga0068868_100021047 3300005338 Bacteria 4910
30 Ga0070689_100001408 3300005340 Bacteria 15342
31 Ga0070689_100016419 3300005340 Bacteria 5417
32 Ga0070692_10014123 3300005345 Unclassified 3740
33 Ga0070692_10067702 3300005345 Unclassified 1896
34 Ga0070692_10153800 3300005345 Bacteria 1312
35 Ga0070669_100006317 3300005353 Bacteria 8544
36 Ga0070669_100122520 3300005353 Bacteria 1985
37 Ga0070669_100265411 3300005353 Bacteria 1371
38 Ga0070669_100272790 3300005353 Bacteria 1353
39 Ga0070675_100109552 3300005354 Bacteria 2334
40 Ga0070673_100185249 3300005364 Bacteria 1784
41 Ga0070701_10064270 3300005438 Bacteria 1944
42 Ga0070705_100034219 3300005440 Bacteria 2839
43 Ga0070700_100000044 3300005441 Bacteria 98346
44 Ga0070700_100002696 3300005441 Bacteria 9067
45 Ga0070700_100033568 3300005441 Bacteria 3092
46 Ga0070700_100083224 3300005441 Bacteria 2071
47 Ga0070700_100095757 3300005441 Bacteria 1946
48 Ga0070700_100127759 3300005441 Unclassified 1711
49 Ga0070694_100002196 3300005444 Bacteria 11575
50 Ga0070694_100026418 3300005444 Bacteria 3762
51 Ga0070694_100030053 3300005444 Unclassified 3551
52 Ga0070662_100184201 3300005457 Bacteria 1648
53 Ga0070681_10363350 3300005458 Bacteria 1358
54 Ga0068867_100129790 3300005459 Bacteria 1957
55 Ga0068867_100306890 3300005459 Unclassified 1310
56 Ga0068867_100431041 3300005459 Unclassified 1119
57 Ga0070706_100009580 3300005467 Bacteria 9007
58 Ga0070707_100212491 3300005468 Unclassified 1885
59 Ga0070707_100307741 3300005468 Bacteria 1540
60 Ga0070698_100027463 3300005471 Bacteria 5919
61 Ga0070698_100136451 3300005471 Unclassified 2407
62 Ga0070699_100008829 3300005518 Bacteria 8726
63 Ga0070699_100014839 3300005518 Bacteria 6699
64 Ga0070699_100055963 3300005518 Unclassified 3415
65 Ga0070684_100306015 3300005535 Bacteria 1459
66 Ga0070697_100000071 3300005536 Bacteria 80945
67 Ga0068853_100017691 3300005539 Bacteria 5883
68 Ga0070686_100003822 3300005544 Bacteria 8288
69 Ga0070686_100019685 3300005544 Bacteria 3981
70 Ga0070695_100014360 3300005545 Unclassified 4773
71 Ga0070695_100151954 3300005545 Bacteria 1617
72 Ga0070696_100174015 3300005546 Viruses 1593
73 Ga0070696_100179492 3300005546 Bacteria 1570
74 Ga0070696_100288354 3300005546 Unclassified 1253
75 Ga0070693_100002890 3300005547 Bacteria 7925
76 Ga0070704_100057705 3300005549 Bacteria 2762
77 Ga0070664_100195259 3300005564 Bacteria 1804
78 Ga0068857_100136404 3300005577 Unclassified 2215
79 Ga0068854_100116163 3300005578 Bacteria 2025
80 Ga0070702_100009034 3300005615 Bacteria 4858
81 Ga0070702_100017632 3300005615 Bacteria 3687
82 Ga0070702_100059103 3300005615 Bacteria 2223
83 Ga0070702_100105311 3300005615 Bacteria 1738
84 Ga0068852_100273231 3300005616 Unclassified 1627
85 Ga0068852_100289759 3300005616 Bacteria 1581
86 Ga0068859_100021000 3300005617 Bacteria 6555
87 Ga0068859_100021104 3300005617 Bacteria 6536
88 Ga0068859_100023271 3300005617 Bacteria 6217
89 Ga0068859_100048696 3300005617 Bacteria 4257
90 Ga0068859_100061202 3300005617 Bacteria 3793
91 Ga0068859_100070827 3300005617 Bacteria 3522
92 Ga0068859_100087249 3300005617 Bacteria 3168
93 Ga0068859_100100852 3300005617 Unclassified 2943
94 Ga0068859_100177562 3300005617 Bacteria 2211
95 Ga0068864_100000988 3300005618 Bacteria 23803
96 Ga0068864_100013137 3300005618 Bacteria 6857
97 Ga0068866_10009500 3300005718 Bacteria 4130
98 Ga0068861_100000754 3300005719 Bacteria 19408
99 Ga0068861_100093334 3300005719 Bacteria 2380
100 Ga0068851_10004871 3300005834 Bacteria 6076
101 Ga0068870_10097940 3300005840 Bacteria 1651
102 Ga0068870_10181792 3300005840 Viruses 1263
103 Ga0068863_100241472 3300005841 Bacteria 1743
104 Ga0068863_100247116 3300005841 Bacteria 1723
105 Ga0068863_100529057 3300005841 Bacteria 1163
106 Ga0068858_100000194 3300005842 Bacteria 64964
107 Ga0068858_100055523 3300005842 Bacteria 3662
108 Ga0068858_100122934 3300005842 Bacteria 2429
109 Ga0068858_100160823 3300005842 Bacteria 2114
110 Ga0068858_100306972 3300005842 Bacteria 1515
111 Ga0068858_100360834 3300005842 Bacteria 1393
112 Ga0068860_100011017 3300005843 Bacteria 8915
113 Ga0068860_100015249 3300005843 Bacteria 7505
114 Ga0068860_100087570 3300005843 Bacteria 2964
115 Ga0068860_100103023 3300005843 Unclassified 2724
116 Ga0068862_100020662 3300005844 Bacteria 5501
117 Ga0068862_100069693 3300005844 Unclassified 3035
118 Ga0068862_100416860 3300005844 Bacteria 1259
119 Ga0081539_10002984 3300005985 Bacteria 22183
120 Ga0081539_10132623 3300005985 Bacteria 1221
121 Ga0070715_10000017 3300006163 Bacteria 132686
122 Ga0097621_100098910 3300006237 Bacteria 2451
123 Ga0097621_100186792 3300006237 Bacteria 1793
124 Ga0068871_100005082 3300006358 Bacteria 9187
125 Ga0075428_100119123 3300006844 Unclassified 2875
126 Ga0075431_100041934 3300006847 Bacteria 4719
127 Ga0075433_10049186 3300006852 Bacteria 3668
128 Ga0075433_10075757 3300006852 Bacteria 2961
129 Ga0075433_10214390 3300006852 Bacteria 1711
130 Ga0075433_10312805 3300006852 Bacteria 1390
131 Ga0075434_100020794 3300006871 Bacteria 6371
132 Ga0075429_100059165 3300006880 Bacteria 3338
133 Ga0075436_100000012 3300006914 Bacteria 188052
134 Ga0097620_100021000 3300006931 Bacteria 6555
135 Ga0097620_100021102 3300006931 Bacteria 6536
136 Ga0097620_100023273 3300006931 Bacteria 6217
137 Ga0097620_100048696 3300006931 Bacteria 4257
138 Ga0097620_100061200 3300006931 Bacteria 3793
139 Ga0097620_100070823 3300006931 Bacteria 3522
140 Ga0097620_100087248 3300006931 Bacteria 3168
141 Ga0097620_100100853 3300006931 Unclassified 2943
142 Ga0097620_100177571 3300006931 Bacteria 2211
143 Ga0075435_100000250 3300007076 Bacteria 33338
144 Ga0111539_10002063 3300009094 Bacteria 26865
145 Ga0111539_10018330 3300009094 Bacteria 8671
146 Ga0105245_10071602 3300009098 Bacteria 3148
147 Ga0105247_10000050 3300009101 Bacteria 146183
148 Ga0105247_10002578 3300009101 Bacteria 12274
149 Ga0114129_10004650 3300009147 Bacteria 19377
150 Ga0114129_10045889 3300009147 Bacteria 6141
151 Ga0114129_10142228 3300009147 Bacteria 3288
152 Ga0114129_10152626 3300009147 Bacteria 3160
153 Ga0114129_10189055 3300009147 Unclassified 2797
154 Ga0114129_10461425 3300009147 Unclassified 1665
155 Ga0105243_10004438 3300009148 Bacteria 11098
156 Ga0105243_10006632 3300009148 Bacteria 8938
157 Ga0105243_10069737 3300009148 Unclassified 2836
158 Ga0105243_10449778 3300009148 Bacteria 1208
159 Ga0105241_10006437 3300009174 Bacteria 8655
160 Ga0105241_10042396 3300009174 Bacteria 3442
161 Ga0105241_10335874 3300009174 Bacteria 1307
162 Ga0105242_10018642 3300009176 Bacteria 5429
163 Ga0105248_10057701 3300009177 Unclassified 4358
164 Ga0105248_10087411 3300009177 Unclassified 3508
165 Ga0105238_10003208 3300009551 Bacteria 16332
166 Ga0105249_10004597 3300009553 Bacteria 11926
167 Ga0105249_10038766 3300009553 Bacteria 4324
168 Ga0105249_10146958 3300009553 Bacteria 2266
169 Ga0105239_10002786 3300010375 Bacteria 21889
170 Ga0105239_10033925 3300010375 Bacteria 5603
171 Ga0105239_10456537 3300010375 Unclassified 1450
172 Ga0105246_10150493 3300011119 Unclassified 1761
173 Ga0157373_10079792 3300013100 Bacteria 2308
174 Ga0157378_10008426 3300013297 Bacteria 8982
175 Ga0157378_10011704 3300013297 Bacteria 7679
176 Ga0157378_10050689 3300013297 Unclassified 3694
177 Ga0157378_10079331 3300013297 Bacteria 2964
178 Ga0163162_10014066 3300013306 Bacteria 7821
179 Ga0163162_10032682 3300013306 Bacteria 5168
180 Ga0163162_10049419 3300013306 Unclassified 4215
181 Ga0163162_10129464 3300013306 Bacteria 2632
182 Ga0163162_10323073 3300013306 Bacteria 1676
183 Ga0163162_10374480 3300013306 Bacteria 1557
184 Ga0163162_10672942 3300013306 Bacteria 1158
185 Ga0157372_10374555 3300013307 Bacteria 1659
186 Ga0157375_10016688 3300013308 Bacteria 6605
187 Ga0157375_10149776 3300013308 Bacteria 2468
188 Ga0157375_10204862 3300013308 Bacteria 2129
189 Ga0157375_10210888 3300013308 Bacteria 2100
190 Ga0157375_10266028 3300013308 Bacteria 1876
191 Ga0163163_10000250 3300014325 Bacteria 54990
192 Ga0163163_10032114 3300014325 Bacteria 5072
193 Ga0163163_10274598 3300014325 Bacteria 1737
194 Ga0157380_10004109 3300014326 Bacteria 10054
195 Ga0157380_10105093 3300014326 Bacteria 2360
196 Ga0163161_10016320 3300017792 Bacteria 5184
197 Ga0163161_10235312 3300017792 Bacteria 1423
198 Ga0207672_1000626 3300025223 Unclassified 4160
199 Ga0207656_10002576 3300025321 Bacteria 6132
200 Ga0207653_10000997 3300025885 Bacteria 9341
201 Ga0207710_10000003 3300025900 Bacteria 1071597
202 Ga0207710_10000432 3300025900 Bacteria 27447
203 Ga0207710_10022222 3300025900 Bacteria 2722
204 Ga0207647_10003788 3300025904 Bacteria 11305
205 Ga0207685_10000017 3300025905 Bacteria 146902
206 Ga0207645_10040971 3300025907 Bacteria 2966
207 Ga0207643_10044026 3300025908 Unclassified 2520
208 Ga0207643_10080141 3300025908 Bacteria 1891
209 Ga0207684_10011460 3300025910 Bacteria 7755
210 Ga0207654_10088491 3300025911 Unclassified 1882
211 Ga0207707_10356814 3300025912 Bacteria 1259
212 Ga0207695_10116915 3300025913 Bacteria 2640
213 Ga0207695_10315475 3300025913 Bacteria 1453
214 Ga0207671_10001695 3300025914 Bacteria 24956
215 Ga0207660_10073753 3300025917 Bacteria 2489
216 Ga0207662_10012450 3300025918 Bacteria 4738
217 Ga0207662_10051109 3300025918 Unclassified 2458
218 Ga0207662_10101727 3300025918 Bacteria 1781
219 Ga0207646_10118529 3300025922 Bacteria 2378
220 Ga0207681_10002636 3300025923 Bacteria 11377
221 Ga0207681_10032140 3300025923 Bacteria 3434
222 Ga0207681_10099149 3300025923 Bacteria 2097
223 Ga0207694_10140877 3300025924 Bacteria 1939
224 Ga0207650_10000269 3300025925 Bacteria 54998
225 Ga0207650_10000441 3300025925 Bacteria 35703
226 Ga0207650_10081525 3300025925 Unclassified 2454
227 Ga0207644_10000093 3300025931 Bacteria 64685
228 Ga0207644_10045615 3300025931 Bacteria 3119
229 Ga0207706_10061826 3300025933 Unclassified 3298
230 Ga0207706_10118786 3300025933 Unclassified 2325
231 Ga0207686_10190207 3300025934 Bacteria 1462
232 Ga0207709_10006668 3300025935 Bacteria 6475
233 Ga0207670_10006077 3300025936 Bacteria 6671
234 Ga0207670_10044819 3300025936 Bacteria 2928
235 Ga0207665_10041416 3300025939 Bacteria 3076
236 Ga0207691_10034818 3300025940 Bacteria 4680
237 Ga0207711_10006624 3300025941 Bacteria 9755
238 Ga0207711_10010121 3300025941 Bacteria 7835
239 Ga0207711_10142770 3300025941 Bacteria 2155
240 Ga0207711_10368691 3300025941 Unclassified 1331
241 Ga0207689_10006289 3300025942 Bacteria 10521
242 Ga0207689_10027263 3300025942 Bacteria 4783
243 Ga0207689_10028845 3300025942 Bacteria 4640
244 Ga0207689_10137719 3300025942 Bacteria 2010
245 Ga0207689_10156816 3300025942 Unclassified 1876
246 Ga0207651_10173934 3300025960 Bacteria 1701
247 Ga0207651_10449652 3300025960 Unclassified 1105
248 Ga0207712_10001583 3300025961 Bacteria 15317
249 Ga0207703_10000225 3300026035 Bacteria 64974
250 Ga0207703_10031499 3300026035 Bacteria 4194
251 Ga0207703_10085481 3300026035 Bacteria 2640
252 Ga0207639_10030056 3300026041 Bacteria 3982
253 Ga0207708_10000031 3300026075 Bacteria 155478
254 Ga0207708_10002245 3300026075 Bacteria 14228
255 Ga0207708_10010806 3300026075 Bacteria 6787
256 Ga0207708_10028574 3300026075 Bacteria 4223
257 Ga0207708_10035503 3300026075 Unclassified 3793
258 Ga0207708_10129926 3300026075 Bacteria 1969
259 Ga0207641_10061304 3300026088 Bacteria 3208
260 Ga0207641_10210834 3300026088 Bacteria 1796
261 Ga0207648_10008065 3300026089 Bacteria 10262
262 Ga0207648_10044501 3300026089 Bacteria 3895
263 Ga0207648_10067621 3300026089 Bacteria 3114
264 Ga0207648_10288645 3300026089 Bacteria 1468
265 Ga0207648_10299200 3300026089 Bacteria 1442
266 Ga0207674_10234535 3300026116 Unclassified 1782
267 Ga0207675_100003376 3300026118 Bacteria 15606
268 Ga0207675_100007834 3300026118 Bacteria 10080
269 Ga0207675_100131376 3300026118 Bacteria 2375
270 Ga0207698_10280081 3300026142 Unclassified 1542
271 Ga0207428_10010263 3300027907 Bacteria 8371
272 Ga0268265_10007907 3300028380 Bacteria 7176
273 Ga0268265_10302120 3300028380 Unclassified 1442
274 Ga0268264_10024116 3300028381 Unclassified 4965
275 Ga0268264_10035113 3300028381 Bacteria 4127
276 Ga0268264_10043608 3300028381 Unclassified 3718
277 Ga0268264_10152818 3300028381 Bacteria 2071
278 Ga0307416_100007530 3300032002 Bacteria 6937
279 Ga0307414_10013768 3300032004 Unclassified 4824
280 Ga0307415_100020642 3300032126 Bacteria 4027
281 Ga0395898_0015431 3300037466 Bacteria 7834
282 Ga0242420_000632 3300038996 Bacteria 4117
283 Ga0242420_010751 3300038996 Bacteria 1526
284 Ga0451576_0097297 3300045051 Bacteria 3061
285 Ga0501292_001031 3300049515 Bacteria 3399
286 Ga0501292_016816 3300049515 Bacteria 1153
287 Ga0501299_018111 3300049522 Bacteria 1263
288 Ga0501038_0001386 3300049574 Bacteria 22156
289 Ga0501198_000258 3300049649 Bacteria 6700
290 Ga0501206_010844 3300049653 Bacteria 1225
291 Ga0501207_006864 3300049654 Unclassified 1610
292 Ga0501216_000562 3300049660 Bacteria 4459
293 Ga0501216_001204 3300049660 Bacteria 3431
294 Ga0501217_002026 3300049661 Unclassified 3921
295 Ga0501223_001998 3300049663 Unclassified 4581
296 Ga0501224_004259 3300049664 Bacteria 2025
297 Ga0501227_000241 3300049665 Bacteria 11142
298 Ga0501227_006934 3300049665 Bacteria 2427
299 Ga0501230_000429 3300049667 Unclassified 4104
300 Ga0501233_002012 3300049668 Unclassified 3545
301 Ga0501233_017395 3300049668 Unclassified 1500
302 Ga0501235_002307 3300049669 Unclassified 4109
303 Ga0501235_002612 3300049669 Bacteria 3876
304 Ga0501235_008982 3300049669 Bacteria 2182
305 Ga0501236_003056 3300049670 Bacteria 1941
306 Ga0501257_001719 3300049686 Bacteria 4566
307 Ga0501259_005649 3300049688 Bacteria 1986
308 Ga0501225_0000361 3300049705 Bacteria 14298
309 Ga0501225_0015961 3300049705 Bacteria 2087
310 Ga0501268_004072 3300049765 Bacteria 2044
311 Ga0501212_002724 3300049851 Bacteria 2156
312 nmdc:mga05p37_145188_c1 3300050507 Bacteria 2906
313 nmdc:mga05p37_206065_c1 3300050507 Bacteria 2379
314 nmdc:mga05p37_51624_c1 3300050507 Bacteria 5056
315 nmdc:mga06r32_28153_c1 3300050510 Bacteria 5255
316 nmdc:mga08y16_200896_c1 3300050511 Bacteria 2066
317 nmdc:mga0n895_205249_c1 3300050512 Unclassified 2001
318 nmdc:mga0n895_218945_c1 3300050512 Unclassified 1933
319 nmdc:mga0n895_41472_c1 3300050512 Bacteria 4475
320 nmdc:mga0rr50_2082_c1 3300050513 Bacteria 11177
321 nmdc:mga08x19_30190_c1 3300050514 Bacteria 3404
322 nmdc:mga08x19_5_c1 3300050514 Bacteria 464292
323 nmdc:mga0a205_11763_c1 3300050515 Bacteria 8072
324 nmdc:mga0a205_174932_c1 3300050515 Bacteria 1352
325 nmdc:mga0a205_1965_c1 3300050515 Bacteria 17905
326 nmdc:mga0a205_23482_c1 3300050515 Bacteria 5851
327 nmdc:mga0a205_278284_c1 3300050515 Bacteria 1549
328 Ga0157379_10048500
329 SwRhRL3b_contig_375620
330 JGI24748J21848_1000014
331 JGI24034J26672_10000012
332 JGI24751J29686_10000111
333 rootL2_10119037
334 Ga0065714_10064441
335 Ga0065712_10000007
336 Ga0065712_10002058
337 Ga0065715_10004236
338 Ga0065715_10089157
339 Ga0065715_10090386
340 Ga0065715_10113346
341 Ga0065715_10221215
342 Ga0065707_10023393
343 Ga0065707_10106751
344 Ga0070676_10059019
345 Ga0070670_100000216
346 Ga0070670_100116753
347 Ga0070670_100372784
348 Ga0068869_100009099
349 Ga0068869_100021211
350 Ga0068869_100035822
351 Ga0068869_100122817
352 Ga0068869_100206902
353 Ga0070666_10024868
354 Ga0070680_100095318
355 Ga0070682_100005991
356 Ga0068868_100021047
357 Ga0070689_100001408
358 Ga0070689_100016419
359 Ga0070692_10014123
360 Ga0070692_10067702
361 Ga0070692_10153800
362 Ga0070669_100006317
363 Ga0070669_100122520
364 Ga0070669_100265411
365 Ga0070669_100272790
366 Ga0070675_100109552
367 Ga0070673_100185249
368 Ga0070701_10064270
369 Ga0070705_100034219
370 Ga0070700_100000044
371 Ga0070700_100002696
372 Ga0070700_100033568
373 Ga0070700_100083224
374 Ga0070700_100095757
375 Ga0070700_100127759
376 Ga0070694_100002196
377 Ga0070694_100026418
378 Ga0070694_100030053
379 Ga0070662_100184201
380 Ga0070681_10363350
381 Ga0068867_100129790
382 Ga0068867_100306890
383 Ga0068867_100431041
384 Ga0070706_100009580
385 Ga0070707_100212491
386 Ga0070707_100307741
387 Ga0070698_100027463
388 Ga0070698_100136451
389 Ga0070699_100008829
390 Ga0070699_100014839
391 Ga0070699_100055963
392 Ga0070684_100306015
393 Ga0070697_100000071
394 Ga0068853_100017691
395 Ga0070686_100003822
396 Ga0070686_100019685
397 Ga0070695_100014360
398 Ga0070695_100151954
399 Ga0070696_100174015
400 Ga0070696_100179492
401 Ga0070696_100288354
402 Ga0070693_100002890
403 Ga0070704_100057705
404 Ga0070664_100195259
405 Ga0068857_100136404
406 Ga0068854_100116163
407 Ga0070702_100009034
408 Ga0070702_100017632
409 Ga0070702_100059103
410 Ga0070702_100105311
411 Ga0068852_100273231
412 Ga0068852_100289759
413 Ga0068859_100021000
414 Ga0068859_100021104
415 Ga0068859_100023271
416 Ga0068859_100048696
417 Ga0068859_100061202
418 Ga0068859_100070827
419 Ga0068859_100087249
420 Ga0068859_100100852
421 Ga0068859_100177562
422 Ga0068864_100000988
423 Ga0068864_100013137
424 Ga0068866_10009500
425 Ga0068861_100000754
426 Ga0068861_100093334
427 Ga0068851_10004871
428 Ga0068870_10097940
429 Ga0068870_10181792
430 Ga0068863_100241472
431 Ga0068863_100247116
432 Ga0068863_100529057
433 Ga0068858_100000194
434 Ga0068858_100055523
435 Ga0068858_100122934
436 Ga0068858_100160823
437 Ga0068858_100306972
438 Ga0068858_100360834
439 Ga0068860_100011017
440 Ga0068860_100015249
441 Ga0068860_100087570
442 Ga0068860_100103023
443 Ga0068862_100020662
444 Ga0068862_100069693
445 Ga0068862_100416860
446 Ga0081539_10002984
447 Ga0081539_10132623
448 Ga0070715_10000017
449 Ga0097621_100098910
450 Ga0097621_100186792
451 Ga0068871_100005082
452 Ga0075428_100119123
453 Ga0075431_100041934
454 Ga0075433_10049186
455 Ga0075433_10075757
456 Ga0075433_10214390
457 Ga0075433_10312805
458 Ga0075434_100020794
459 Ga0075429_100059165
460 Ga0075436_100000012
461 Ga0097620_100021000
462 Ga0097620_100021102
463 Ga0097620_100023273
464 Ga0097620_100048696
465 Ga0097620_100061200
466 Ga0097620_100070823
467 Ga0097620_100087248
468 Ga0097620_100100853
469 Ga0097620_100177571
470 Ga0075435_100000250
471 Ga0111539_10002063
472 Ga0111539_10018330
473 Ga0105245_10071602
474 Ga0105247_10000050
475 Ga0105247_10002578
476 Ga0114129_10004650
477 Ga0114129_10045889
478 Ga0114129_10142228
479 Ga0114129_10152626
480 Ga0114129_10189055
481 Ga0114129_10461425
482 Ga0105243_10004438
483 Ga0105243_10006632
484 Ga0105243_10069737
485 Ga0105243_10449778
486 Ga0105241_10006437
487 Ga0105241_10042396
488 Ga0105241_10335874
489 Ga0105242_10018642
490 Ga0105248_10057701
491 Ga0105248_10087411
492 Ga0105238_10003208
493 Ga0105249_10004597
494 Ga0105249_10038766
495 Ga0105249_10146958
496 Ga0105239_10002786
497 Ga0105239_10033925
498 Ga0105239_10456537
499 Ga0105246_10150493
500 Ga0157373_10079792
501 Ga0157378_10008426
502 Ga0157378_10011704
503 Ga0157378_10050689
504 Ga0157378_10079331
505 Ga0163162_10014066
506 Ga0163162_10032682
507 Ga0163162_10049419
508 Ga0163162_10129464
509 Ga0163162_10323073
510 Ga0163162_10374480
511 Ga0163162_10672942
512 Ga0157372_10374555
513 Ga0157375_10016688
514 Ga0157375_10149776
515 Ga0157375_10204862
516 Ga0157375_10210888
517 Ga0157375_10266028
518 Ga0163163_10000250
519 Ga0163163_10032114
520 Ga0163163_10274598
521 Ga0157380_10004109
522 Ga0157380_10105093
523 Ga0163161_10016320
524 Ga0163161_10235312
525 Ga0207672_1000626
526 Ga0207656_10002576
527 Ga0207653_10000997
528 Ga0207710_10000003
529 Ga0207710_10000432
530 Ga0207710_10022222
531 Ga0207647_10003788
532 Ga0207685_10000017
533 Ga0207645_10040971
534 Ga0207643_10044026
535 Ga0207643_10080141
536 Ga0207684_10011460
537 Ga0207654_10088491
538 Ga0207707_10356814
539 Ga0207695_10116915
540 Ga0207695_10315475
541 Ga0207671_10001695
542 Ga0207660_10073753
543 Ga0207662_10012450
544 Ga0207662_10051109
545 Ga0207662_10101727
546 Ga0207646_10118529
547 Ga0207681_10002636
548 Ga0207681_10032140
549 Ga0207681_10099149
550 Ga0207694_10140877
551 Ga0207650_10000269
552 Ga0207650_10000441
553 Ga0207650_10081525
554 Ga0207644_10000093
555 Ga0207644_10045615
556 Ga0207706_10061826
557 Ga0207706_10118786
558 Ga0207686_10190207
559 Ga0207709_10006668
560 Ga0207670_10006077
561 Ga0207670_10044819
562 Ga0207665_10041416
563 Ga0207691_10034818
564 Ga0207711_10006624
565 Ga0207711_10010121
566 Ga0207711_10142770
567 Ga0207711_10368691
568 Ga0207689_10006289
569 Ga0207689_10027263
570 Ga0207689_10028845
571 Ga0207689_10137719
572 Ga0207689_10156816
573 Ga0207651_10173934
574 Ga0207651_10449652
575 Ga0207712_10001583
576 Ga0207703_10000225
577 Ga0207703_10031499
578 Ga0207703_10085481
579 Ga0207639_10030056
580 Ga0207708_10000031
581 Ga0207708_10002245
582 Ga0207708_10010806
583 Ga0207708_10028574
584 Ga0207708_10035503
585 Ga0207708_10129926
586 Ga0207641_10061304
587 Ga0207641_10210834
588 Ga0207648_10008065
589 Ga0207648_10044501
590 Ga0207648_10067621
591 Ga0207648_10288645
592 Ga0207648_10299200
593 Ga0207674_10234535
594 Ga0207675_100003376
595 Ga0207675_100007834
596 Ga0207675_100131376
597 Ga0207698_10280081
598 Ga0207428_10010263
599 Ga0268265_10007907
600 Ga0268265_10302120
601 Ga0268264_10024116
602 Ga0268264_10035113
603 Ga0268264_10043608
604 Ga0268264_10152818
605 Ga0307416_100007530
606 Ga0307414_10013768
607 Ga0307415_100020642
608 Ga0395898_0015431
609 Ga0242420_000632
610 Ga0242420_010751
611 Ga0451576_0097297
612 Ga0501292_001031
613 Ga0501292_016816
614 Ga0501299_018111
615 Ga0501038_0001386
616 Ga0501198_000258
617 Ga0501206_010844
618 Ga0501207_006864
619 Ga0501216_000562
620 Ga0501216_001204
621 Ga0501217_002026
622 Ga0501223_001998
623 Ga0501224_004259
624 Ga0501227_000241
625 Ga0501227_006934
626 Ga0501230_000429
627 Ga0501233_002012
628 Ga0501233_017395
629 Ga0501235_002307
630 Ga0501235_002612
631 Ga0501235_008982
632 Ga0501236_003056
633 Ga0501257_001719
634 Ga0501259_005649
635 Ga0501225_0000361
636 Ga0501225_0015961
637 Ga0501268_004072
638 Ga0501212_002724
639 nmdc:mga05p37_145188_c1
640 nmdc:mga05p37_206065_c1
641 nmdc:mga05p37_51624_c1
642 nmdc:mga06r32_28153_c1
643 nmdc:mga08y16_200896_c1
644 nmdc:mga0n895_205249_c1
645 nmdc:mga0n895_218945_c1
646 nmdc:mga0n895_41472_c1
647 nmdc:mga0rr50_2082_c1
648 nmdc:mga08x19_30190_c1
649 nmdc:mga08x19_5_c1
650 nmdc:mga0a205_11763_c1
651 nmdc:mga0a205_174932_c1
652 nmdc:mga0a205_1965_c1
653 nmdc:mga0a205_23482_c1
654 nmdc:mga0a205_278284_c1

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pt6-assembly1.cif.gz_A i domain from human integrin alpha1-beta1 0.7615 104 299
1ck4-assembly1.cif.gz_A crystal structure of rat a1b1 integrin i-domain. 0.7566 104 299
1aox-assembly1.cif.gz_A i domain from integrin alpha2-beta1 0.7548 98 300
5thp-assembly5.cif.gz_O rhodocetin in complex with the integrin alpha2-a domain 0.7543 103 299
4bj3-assembly1.cif.gz_B integrin alpha2 i domain e318w-collagen complex 0.7489 105 243
ID Description Score Start End Superfamily
af_I1J6W3_279_463_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8285 106 208 3.40.50.410
af_A0A0N7KTY9_60_204_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8237 104 205 3.40.50.410
af_I1JH43_261_411_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8167 106 205 3.40.50.410
af_A0A0P0XV48_261_417_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8135 106 207 3.40.50.410
af_A0A0P0WT04_289_392_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8022 106 203 3.40.50.410
ID Description Score Start End GO Terms
AF-A0A2V8PKS3-F1-model_v4 VWFA domain-containing protein 0.9817 67 349
AF-A0A2V8PKS3-F1-model_v4 VWFA domain-containing protein 0.9783 67 349
AF-A0A352F3N5-F1-model_v4 Uncharacterized protein 0.935 46 308
AF-A0A523DP30-F1-model_v4 VWA domain-containing protein 0.9002 55 349
AF-A0A2V9CK69-F1-model_v4 VWA domain-containing protein 0.8926 47 347

Map