F408087

General Info

Members Datasets Scaffolds Average Seq Length
325 223 650 426

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221681|2644456328
Length 466
Sequence APRRPPLQGSAGAGPGRRYPCPVSPSSSDPVARTPGRPIRVALLGCGVVGTEVARLLTRDADELAQRVGAPMELVGIAVRRLGRERDLDVPDELFTTDAAGLVSRGDIDVVIEVIGGIDLARDLILSALEHGASVVTANKALLAEDGATLFEAAHKAERDLYFEAAVAGAIPIVRPLRESLAGDRVQRVLGIVNGTTNFILDAMTTTGQGFSEALDEAQRLGYAEADPTADIEGFDAASKAAILAGLAFHTRVTIGDVHREGITDVTAADVRSADEMGCVVKLLAICERHETPDGPAVSARVHPAMIPLTHPLASVRGAYNAVFVESEAAGELMFYGPGAGGAPTASAVLGDVVSVARNRRSDVFGPGESTHAQLEVLDMGRARTRYHVSIDVDDRAGVLASVASAFAEYDVSIKTVRQEGSGSDAQLVIVTHEAEDAALSATVASLRGLDMVRDVTSVMRVEGGF

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
97 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
106 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
107 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
116 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
117 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
124 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
125 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
126 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
127 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
138 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
139 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
140 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
158 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
172 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
173 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
176 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
177 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
178 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
179 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
184 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
188 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
189 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
190 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
191 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
196 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
197 2643221604 Nocardioides sp. Root190 Isolate Unclassified
198 2643221617 Nocardioides sp. Root79 Isolate Unclassified
199 2643221620 Nocardioides sp. Root240 Isolate Unclassified
200 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
201 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
202 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
203 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
204 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
205 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
206 2738541305 Nocardioides sp. CF167 Isolate Unclassified
207 2739367898 Nocardioides sp. CF479 Isolate Unclassified
208 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
209 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
210 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
211 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
212 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
213 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
214 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
215 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
216 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
217 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
218 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
219 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
220 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
221 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
222 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
223 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.15
Metatranscriptomes 0.92
Isolates 8.92

Biome Distribution

Category Percentage (%)
Aerial Root 0.31
Bulb 0
Endosphere 4.31
Nodule 0.31
Rhizoplane 4.62
Rhizosphere 76.31
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10010920 3300001979 Bacteria 3472
2 Ga0007423J48922_100583 3300003285 Bacteria 9774
3 Ga0006562J51391_1111086 3300003578 Bacteria 1880
4 Ga0070683_100027191 3300005329 Bacteria 5159
5 Ga0070683_100123477 3300005329 Bacteria 2447
6 Ga0070683_100128360 3300005329 Bacteria 2398
7 Ga0070682_100065335 3300005337 Bacteria 2312
8 Ga0068868_100078666 3300005338 Bacteria 2640
9 Ga0070660_100085566 3300005339 Bacteria 2480
10 Ga0070660_100089914 3300005339 Bacteria 2420
11 Ga0070660_100185777 3300005339 Bacteria 1683
12 Ga0070687_100057508 3300005343 Bacteria 2040
13 Ga0070661_100128131 3300005344 Bacteria 1905
14 Ga0070692_10003284 3300005345 Bacteria 6526
15 Ga0070674_100037244 3300005356 Bacteria 3270
16 Ga0070659_100000589 3300005366 Bacteria 26580
17 Ga0070667_100102157 3300005367 Bacteria 2477
18 Ga0070714_100168925 3300005435 Bacteria 1984
19 Ga0070700_100007851 3300005441 Bacteria 5787
20 Ga0070681_10000009 3300005458 Bacteria 146582
21 Ga0070681_10022116 3300005458 Bacteria 6383
22 Ga0070681_10032077 3300005458 Bacteria 5272
23 Ga0070681_10147069 3300005458 Bacteria 2285
24 Ga0068867_100005076 3300005459 Bacteria 9297
25 Ga0070679_100000107 3300005530 Bacteria 65501
26 Ga0070679_100002626 3300005530 Bacteria 16353
27 Ga0070679_100029432 3300005530 Bacteria 5419
28 Ga0070679_100041700 3300005530 Bacteria 4568
29 Ga0070679_100051646 3300005530 Bacteria 4095
30 Ga0070684_100049284 3300005535 Bacteria 3655
31 Ga0068853_100040674 3300005539 Bacteria 3968
32 Ga0068853_100054282 3300005539 Bacteria 3453
33 Ga0070672_100064586 3300005543 Bacteria 2892
34 Ga0070696_100003355 3300005546 Bacteria 10683
35 Ga0068855_100002898 3300005563 Bacteria 20987
36 Ga0068855_100008979 3300005563 Bacteria 12079
37 Ga0070664_100117709 3300005564 Bacteria 2324
38 Ga0068857_100132719 3300005577 Bacteria 2247
39 Ga0070702_100082313 3300005615 Bacteria 1931
40 Ga0068852_100041892 3300005616 Bacteria 3874
41 Ga0068852_100046850 3300005616 Bacteria 3685
42 Ga0068866_10009882 3300005718 Bacteria 4069
43 Ga0068861_100007491 3300005719 Bacteria 7483
44 Ga0068870_10002365 3300005840 Bacteria 7843
45 Ga0081455_10006614 3300005937 Bacteria 12403
46 Ga0081538_10072095 3300005981 Bacteria 1896
47 Ga0081540_1007527 3300005983 Bacteria 7752
48 Ga0081539_10006771 3300005985 Bacteria 10757
49 Ga0081539_10048239 3300005985 Bacteria 2424
50 Ga0081539_10092943 3300005985 Bacteria 1555
51 Ga0070717_10072252 3300006028 Bacteria 2881
52 Ga0075365_10013053 3300006038 Bacteria 4955
53 Ga0075368_10003684 3300006042 Bacteria 5145
54 Ga0075363_100024636 3300006048 Bacteria 3061
55 Ga0075364_10071398 3300006051 Bacteria 2287
56 Ga0075367_10053556 3300006178 Bacteria 2391
57 Ga0075428_100065165 3300006844 Bacteria 3990
58 Ga0075428_100178976 3300006844 Bacteria 2296
59 Ga0075430_100000832 3300006846 Bacteria 24156
60 Ga0075429_100006844 3300006880 Bacteria 9896
61 Ga0068865_100033339 3300006881 Bacteria 3448
62 Ga0105240_10029000 3300009093 Bacteria 7218
63 Ga0105240_10196868 3300009093 Bacteria 2365
64 Ga0114129_10003262 3300009147 Bacteria 22775
65 Ga0114129_10048467 3300009147 Bacteria 5969
66 Ga0105243_10011284 3300009148 Bacteria 6759
67 Ga0105243_10193510 3300009148 Bacteria 1778
68 Ga0105241_10000905 3300009174 Bacteria 22422
69 Ga0105248_10085245 3300009177 Bacteria 3555
70 Ga0105237_10072224 3300009545 Bacteria 3445
71 Ga0105238_10018664 3300009551 Bacteria 7063
72 Ga0105249_10030461 3300009553 Bacteria 4877
73 Ga0105239_10011531 3300010375 Bacteria 9857
74 Ga0157370_10003520 3300013104 Bacteria 18360
75 Ga0157370_10080272 3300013104 Bacteria 3071
76 Ga0157369_10052388 3300013105 Bacteria 4416
77 Ga0157378_10104345 3300013297 Bacteria 2591
78 Ga0157372_10111913 3300013307 Bacteria 3128
79 Ga0157372_10123353 3300013307 Bacteria 2978
80 Ga0157372_10312242 3300013307 Bacteria 1830
81 Ga0157375_10216360 3300013308 Bacteria 2074
82 Ga0157377_10032574 3300014745 Bacteria 2839
83 Ga0213875_10005328 3300021388 Bacteria 6917
84 Ga0224712_10003868 3300022467 Bacteria 3960
85 Ga0207688_10014746 3300025901 Bacteria 4242
86 Ga0207647_10005459 3300025904 Bacteria 9317
87 Ga0207647_10006462 3300025904 Bacteria 8520
88 Ga0207643_10001341 3300025908 Bacteria 14242
89 Ga0207705_10009153 3300025909 Bacteria 7216
90 Ga0207705_10085245 3300025909 Bacteria 2308
91 Ga0207707_10000396 3300025912 Bacteria 45547
92 Ga0207707_10041408 3300025912 Bacteria 4023
93 Ga0207695_10001306 3300025913 Bacteria 42341
94 Ga0207671_10000970 3300025914 Bacteria 35528
95 Ga0207660_10000105 3300025917 Bacteria 47224
96 Ga0207660_10107933 3300025917 Bacteria 2090
97 Ga0207660_10112374 3300025917 Bacteria 2052
98 Ga0207662_10074929 3300025918 Bacteria 2055
99 Ga0207657_10036950 3300025919 Bacteria 4367
100 Ga0207657_10088506 3300025919 Bacteria 2588
101 Ga0207657_10176685 3300025919 Bacteria 1728
102 Ga0207657_10225980 3300025919 Bacteria 1498
103 Ga0207652_10000118 3300025921 Bacteria 87541
104 Ga0207652_10012775 3300025921 Bacteria 6788
105 Ga0207652_10018561 3300025921 Bacteria 5707
106 Ga0207694_10003742 3300025924 Bacteria 12053
107 Ga0207687_10153787 3300025927 Bacteria 1758
108 Ga0207664_10060126 3300025929 Bacteria 3028
109 Ga0207690_10000113 3300025932 Bacteria 66612
110 Ga0207690_10160076 3300025932 Bacteria 1677
111 Ga0207690_10229469 3300025932 Bacteria 1424
112 Ga0207709_10067846 3300025935 Bacteria 2252
113 Ga0207704_10031226 3300025938 Bacteria 2998
114 Ga0207691_10000684 3300025940 Bacteria 33504
115 Ga0207689_10062269 3300025942 Bacteria 3068
116 Ga0207661_10010024 3300025944 Bacteria 6808
117 Ga0207661_10080758 3300025944 Bacteria 2684
118 Ga0207667_10008641 3300025949 Bacteria 12078
119 Ga0207677_10003676 3300026023 Bacteria 8143
120 Ga0207639_10027309 3300026041 Bacteria 4157
121 Ga0207639_10055135 3300026041 Bacteria 3041
122 Ga0207678_10057541 3300026067 Bacteria 3345
123 Ga0207678_10094340 3300026067 Bacteria 2557
124 Ga0207708_10000521 3300026075 Bacteria 29697
125 Ga0207708_10011272 3300026075 Bacteria 6652
126 Ga0207648_10013443 3300026089 Bacteria 7617
127 Ga0207676_10126174 3300026095 Bacteria 2168
128 Ga0207674_10182279 3300026116 Bacteria 2051
129 Ga0207675_100012502 3300026118 Bacteria 7930
130 Ga0207675_100133900 3300026118 Bacteria 2350
131 Ga0207675_100151174 3300026118 Bacteria 2210
132 Ga0207698_10017477 3300026142 Bacteria 4867
133 Ga0209813_10003433 3300027866 Bacteria 3708
134 Ga0265334_10015819 3300028573 Bacteria 3129
135 Ga0307515_10094764 3300028794 Bacteria 3683
136 Ga0265338_10015569 3300028800 Bacteria 8335
137 Ga0307512_10012103 3300030522 Bacteria 8155
138 Ga0316182_1192363 3300030745 Bacteria 7152
139 Ga0265325_10001226 3300031241 Bacteria 18278
140 Ga0265325_10037940 3300031241 Bacteria 2544
141 Ga0265340_10000902 3300031247 Bacteria 16831
142 Ga0265340_10001659 3300031247 Bacteria 12787
143 Ga0265340_10003796 3300031247 Bacteria 8513
144 Ga0265340_10007135 3300031247 Bacteria 6088
145 Ga0265339_10021720 3300031249 Bacteria 3728
146 Ga0307513_10001046 3300031456 Bacteria 40182
147 Ga0307508_10182998 3300031616 Bacteria 1698
148 Ga0316579_10000018 3300031691 Bacteria 39055
149 Ga0265314_10030862 3300031711 Bacteria 3963
150 Ga0265314_10039249 3300031711 Bacteria 3413
151 Ga0265342_10017687 3300031712 Bacteria 4632
152 Ga0316576_10000414 3300031727 Bacteria 19631
153 Ga0316576_10023381 3300031727 Bacteria 4304
154 Ga0316578_10085256 3300031728 Bacteria 1883
155 Ga0307413_10062426 3300031824 Bacteria 2305
156 Ga0307410_10047788 3300031852 Bacteria 2862
157 Ga0307409_100023002 3300031995 Bacteria 4308
158 Ga0307416_100096314 3300032002 Bacteria 2559
159 Ga0307411_10041009 3300032005 Bacteria 2942
160 Ga0307507_10000001 3300033179 Bacteria 417520
161 Ga0307510_10055228 3300033180 Bacteria 4150
162 Ga0373951_0000011 3300035091 Bacteria 76225
163 Ga0316574_0035423 3300035398 Bacteria 3050
164 Ga0316584_0018028 3300036712 Bacteria 5087
165 Ga0395898_0075898 3300037466 Bacteria 3246
166 Ga0436364_0222672 3300037853 Bacteria 11418
167 Ga0395901_0038801 3300038443 Bacteria 4926
168 Ga0395901_0052245 3300038443 Bacteria 4247
169 Ga0436365_1229798 3300039437 Bacteria 30942
170 Ga0436363_1042496 3300039450 Bacteria 1551
171 Ga0451791_0871926 3300041451 Bacteria 2768
172 Ga0451833_0377854 3300041491 Bacteria 2516
173 Ga0451837_0225486 3300041494 Bacteria 5513
174 Ga0466969_0006472 3300044656 Bacteria 6233
175 Ga0466965_0008333 3300044683 Bacteria 4795
176 Ga0466965_0074846 3300044683 Bacteria 1707
177 Ga0466966_0077914 3300044684 Bacteria 2068
178 Ga0466961_0007284 3300044693 Bacteria 7040
179 Ga0466961_0009449 3300044693 Bacteria 6209
180 Ga0466961_0033644 3300044693 Bacteria 3292
181 Ga0466961_0037200 3300044693 Bacteria 3123
182 Ga0466961_0038762 3300044693 Bacteria 3056
183 Ga0466963_0036249 3300044694 Bacteria 3216
184 Ga0466963_0042039 3300044694 Bacteria 3000
185 Ga0466963_0119856 3300044694 Bacteria 1810
186 Ga0466971_0002659 3300044719 Bacteria 7546
187 Ga0466970_0001256 3300044765 Bacteria 12288
188 Ga0466970_0005054 3300044765 Bacteria 6521
189 Ga0466970_0009076 3300044765 Bacteria 5017
190 Ga0466970_0029616 3300044765 Bacteria 2884
191 Ga0466957_0022836 3300044842 Bacteria 3694
192 Ga0466957_0047569 3300044842 Bacteria 2606
193 Ga0466960_0000208 3300044901 Bacteria 20349
194 Ga0466960_0004547 3300044901 Bacteria 5439
195 Ga0466958_0015187 3300045836 Bacteria 4408
196 Ga0466967_0002758 3300045976 Bacteria 11111
197 Ga0466967_0025613 3300045976 Bacteria 4867
198 Ga0466967_0082426 3300045976 Bacteria 2907
199 Ga0466967_0105280 3300045976 Bacteria 2584
200 Ga0466967_0117606 3300045976 Bacteria 2451
201 Ga0466967_0123853 3300045976 Bacteria 2392
202 Ga0466967_0133569 3300045976 Bacteria 2306
203 Ga0466967_0202121 3300045976 Bacteria 1882
204 Ga0466967_0208672 3300045976 Bacteria 1852
205 Ga0495603_0098472 3300046455 Bacteria 1708
206 Ga0495629_0004204 3300046459 Bacteria 10802
207 Ga0495651_0001092 3300046462 Bacteria 20910
208 Ga0495650_0008148 3300046471 Bacteria 6166
209 Ga0495628_0008418 3300046516 Bacteria 8851
210 Ga0495652_0017443 3300046529 Bacteria 6405
211 Ga0495652_0063004 3300046529 Bacteria 3124
212 Ga0495613_0000571 3300046689 Bacteria 30034
213 Ga0495600_0015025 3300046809 Bacteria 4889
214 Ga0495604_0012763 3300047317 Bacteria 6688
215 Ga0496102_0099439 3300048905 Bacteria 2700
216 Ga0496103_0124130 3300048906 Bacteria 1646
217 Ga0496104_0082105 3300048907 Bacteria 3074
218 Ga0496106_0096554 3300048909 Bacteria 2287
219 Ga0496108_0097600 3300048911 Bacteria 2504
220 Ga0496108_0136302 3300048911 Bacteria 2112
221 Ga0496108_0328813 3300048911 Bacteria 1333
222 Ga0496109_0136246 3300048912 Bacteria 2294
223 Ga0496110_0031198 3300048913 Bacteria 4597
224 Ga0496111_0097738 3300048914 Bacteria 2155
225 Ga0496113_0010693 3300048916 Bacteria 6079
226 Ga0496114_0067375 3300048917 Bacteria 3003
227 Ga0496114_0135245 3300048917 Bacteria 2131
228 Ga0496115_0032461 3300048918 Bacteria 4119
229 Ga0496117_0016597 3300048920 Bacteria 6203
230 Ga0496118_0012997 3300048921 Bacteria 7924
231 Ga0496118_0063498 3300048921 Bacteria 2717
232 Ga0496122_0000569 3300048925 Bacteria 75600
233 Ga0496122_0000649 3300048925 Bacteria 70427
234 Ga0496123_0000275 3300048926 Bacteria 101770
235 Ga0496123_0051913 3300048926 Bacteria 2726
236 Ga0496124_0000985 3300048927 Bacteria 45202
237 Ga0496125_0000015 3300048928 Bacteria 516648
238 Ga0496126_0016199 3300048929 Bacteria 7466
239 Ga0496126_0058594 3300048929 Bacteria 3471
240 Ga0501032_0076722 3300049569 Bacteria 2225
241 Ga0501034_0003061 3300049571 Bacteria 19288
242 Ga0501034_0027286 3300049571 Bacteria 5809
243 Ga0501034_0093023 3300049571 Bacteria 3012
244 Ga0501038_0001765 3300049574 Bacteria 20110
245 Ga0501040_0099430 3300049576 Bacteria 2028
246 Ga0501042_0166467 3300049578 Bacteria 1591
247 Ga0501046_0003930 3300049580 Bacteria 13592
248 Ga0501046_0029108 3300049580 Bacteria 4494
249 Ga0501047_0119192 3300049581 Bacteria 2521
250 Ga0501067_0009159 3300049583 Bacteria 5483
251 Ga0501067_0075753 3300049583 Bacteria 1864
252 Ga0501068_0018449 3300049584 Bacteria 4041
253 Ga0501069_0097522 3300049585 Bacteria 1666
254 Ga0501070_0001042 3300049586 Bacteria 24971
255 Ga0501070_0007713 3300049586 Bacteria 9124
256 Ga0501070_0009858 3300049586 Bacteria 8077
257 Ga0501070_0010654 3300049586 Bacteria 7773
258 Ga0501070_0010820 3300049586 Bacteria 7707
259 Ga0501070_0061997 3300049586 Bacteria 3097
260 Ga0501071_0011429 3300049587 Bacteria 5980
261 Ga0501072_0016830 3300049588 Bacteria 5617
262 Ga0501072_0074240 3300049588 Bacteria 2689
263 Ga0501073_0000753 3300049589 Bacteria 22937
264 Ga0501073_0016540 3300049589 Bacteria 5346
265 Ga0501074_0001128 3300049590 Bacteria 17482
266 Ga0501074_0007987 3300049590 Bacteria 7661
267 Ga0501074_0011719 3300049590 Bacteria 6372
268 Ga0501079_0002398 3300049741 Bacteria 13581
269 Ga0501080_0004138 3300049742 Bacteria 12861
270 Ga0501080_0012332 3300049742 Bacteria 7833
271 Ga0501080_0027193 3300049742 Bacteria 5320
272 Ga0501080_0075772 3300049742 Bacteria 3129
273 Ga0501080_0162712 3300049742 Bacteria 2060
274 Ga0501083_0057299 3300049744 Bacteria 2609
275 Ga0501044_0021781 3300049823 Bacteria 6835
276 Ga0501044_0040045 3300049823 Bacteria 4886
277 Ga0501044_0065708 3300049823 Bacteria 3699
278 Ga0501044_0096522 3300049823 Bacteria 2977
279 nmdc:mga00v17_60072_c1 3300050491 Bacteria 2334
280 nmdc:mga09592_7651_c1 3300050508 Bacteria 8785
281 nmdc:mga0qj67_45772_c1 3300050509 Bacteria 3452
282 nmdc:mga06r32_10593_c1 3300050510 Bacteria 8315
283 Ga0495601_0014934 3300053077 Bacteria 4688
284 Ga0495601_0095115 3300053077 Bacteria 1920
285 Ga0500644_0000317 3300053088 Bacteria 25166
286 Ga0500644_0031841 3300053088 Bacteria 1680
287 Ga0500641_0007214 3300053096 Bacteria 3962
288 Ga0500556_0000284 3300053104 Bacteria 39641
289 Ga0500593_000507 3300053117 Bacteria 15307
290 Ga0500616_0000240 3300053153 Bacteria 86336
291 Ga0500616_0013864 3300053153 Bacteria 4653
292 Ga0501084_0031229 3300054114 Bacteria 4454
293 Ga0501084_0082126 3300054114 Bacteria 2704
294 Ga0501082_0019563 3300060353 Bacteria 5839
295 Ga0501082_0039780 3300060353 Bacteria 4056
296 Ga0501082_0052143 3300060353 Bacteria 3526
297 2644456328 2643221681 Bacteria 3707866
298 2558913221 2558860112 Bacteria 9931328
299 2644036486 2643221604 Bacteria 5014917
300 2644099075 2643221617 Bacteria 5139111
301 2644114956 2643221620 Bacteria 5134593
302 2644505239 2643221690 Bacteria 4654705
303 2644527537 2643221694 Bacteria 4392972
304 2644538061 2643221697 Bacteria 3575694
305 2644667386 2643221722 Bacteria 4247614
306 2645720395 2643221961 Bacteria 3919167
307 2645723336 2643221962 Bacteria 3874254
308 2738867880 2738541305 Bacteria 4910150
309 2740167641 2739367898 Bacteria 4367674
310 2812332195 2811994874 Bacteria 5367947
311 2812362217 2811994880 Bacteria 4147780
312 2816505153 2816332139 Bacteria 9138787
313 2855390680 2855386786 Bacteria 4752232
314 2857712204 2857710386 Bacteria 3186771
315 2863070836 2863067949 Bacteria 8541735
316 2866555215 2866552031 Bacteria 5824618
317 2868091836 2868088558 Bacteria 7609351
318 2870788558 2870782633 Bacteria 9624083
319 2884994512 2884994152 Bacteria 4492978
320 2891332396 2891326441 Bacteria 6439512
321 2932433239 2932431166 Bacteria 4215299
322 2984595283 2984592036 Bacteria 3670284
323 8025480770 8025478263 Bacteria 8209203
324 8054613209 8054609563 Bacteria 5170090
325 8056211761 8056207758 Bacteria 8639239
326 JGI24740J21852_10010920
327 Ga0007423J48922_100583
328 Ga0006562J51391_1111086
329 Ga0070683_100027191
330 Ga0070683_100123477
331 Ga0070683_100128360
332 Ga0070682_100065335
333 Ga0068868_100078666
334 Ga0070660_100085566
335 Ga0070660_100089914
336 Ga0070660_100185777
337 Ga0070687_100057508
338 Ga0070661_100128131
339 Ga0070692_10003284
340 Ga0070674_100037244
341 Ga0070659_100000589
342 Ga0070667_100102157
343 Ga0070714_100168925
344 Ga0070700_100007851
345 Ga0070681_10000009
346 Ga0070681_10022116
347 Ga0070681_10032077
348 Ga0070681_10147069
349 Ga0068867_100005076
350 Ga0070679_100000107
351 Ga0070679_100002626
352 Ga0070679_100029432
353 Ga0070679_100041700
354 Ga0070679_100051646
355 Ga0070684_100049284
356 Ga0068853_100040674
357 Ga0068853_100054282
358 Ga0070672_100064586
359 Ga0070696_100003355
360 Ga0068855_100002898
361 Ga0068855_100008979
362 Ga0070664_100117709
363 Ga0068857_100132719
364 Ga0070702_100082313
365 Ga0068852_100041892
366 Ga0068852_100046850
367 Ga0068866_10009882
368 Ga0068861_100007491
369 Ga0068870_10002365
370 Ga0081455_10006614
371 Ga0081538_10072095
372 Ga0081540_1007527
373 Ga0081539_10006771
374 Ga0081539_10048239
375 Ga0081539_10092943
376 Ga0070717_10072252
377 Ga0075365_10013053
378 Ga0075368_10003684
379 Ga0075363_100024636
380 Ga0075364_10071398
381 Ga0075367_10053556
382 Ga0075428_100065165
383 Ga0075428_100178976
384 Ga0075430_100000832
385 Ga0075429_100006844
386 Ga0068865_100033339
387 Ga0105240_10029000
388 Ga0105240_10196868
389 Ga0114129_10003262
390 Ga0114129_10048467
391 Ga0105243_10011284
392 Ga0105243_10193510
393 Ga0105241_10000905
394 Ga0105248_10085245
395 Ga0105237_10072224
396 Ga0105238_10018664
397 Ga0105249_10030461
398 Ga0105239_10011531
399 Ga0157370_10003520
400 Ga0157370_10080272
401 Ga0157369_10052388
402 Ga0157378_10104345
403 Ga0157372_10111913
404 Ga0157372_10123353
405 Ga0157372_10312242
406 Ga0157375_10216360
407 Ga0157377_10032574
408 Ga0213875_10005328
409 Ga0224712_10003868
410 Ga0207688_10014746
411 Ga0207647_10005459
412 Ga0207647_10006462
413 Ga0207643_10001341
414 Ga0207705_10009153
415 Ga0207705_10085245
416 Ga0207707_10000396
417 Ga0207707_10041408
418 Ga0207695_10001306
419 Ga0207671_10000970
420 Ga0207660_10000105
421 Ga0207660_10107933
422 Ga0207660_10112374
423 Ga0207662_10074929
424 Ga0207657_10036950
425 Ga0207657_10088506
426 Ga0207657_10176685
427 Ga0207657_10225980
428 Ga0207652_10000118
429 Ga0207652_10012775
430 Ga0207652_10018561
431 Ga0207694_10003742
432 Ga0207687_10153787
433 Ga0207664_10060126
434 Ga0207690_10000113
435 Ga0207690_10160076
436 Ga0207690_10229469
437 Ga0207709_10067846
438 Ga0207704_10031226
439 Ga0207691_10000684
440 Ga0207689_10062269
441 Ga0207661_10010024
442 Ga0207661_10080758
443 Ga0207667_10008641
444 Ga0207677_10003676
445 Ga0207639_10027309
446 Ga0207639_10055135
447 Ga0207678_10057541
448 Ga0207678_10094340
449 Ga0207708_10000521
450 Ga0207708_10011272
451 Ga0207648_10013443
452 Ga0207676_10126174
453 Ga0207674_10182279
454 Ga0207675_100012502
455 Ga0207675_100133900
456 Ga0207675_100151174
457 Ga0207698_10017477
458 Ga0209813_10003433
459 Ga0265334_10015819
460 Ga0307515_10094764
461 Ga0265338_10015569
462 Ga0307512_10012103
463 Ga0316182_1192363
464 Ga0265325_10001226
465 Ga0265325_10037940
466 Ga0265340_10000902
467 Ga0265340_10001659
468 Ga0265340_10003796
469 Ga0265340_10007135
470 Ga0265339_10021720
471 Ga0307513_10001046
472 Ga0307508_10182998
473 Ga0316579_10000018
474 Ga0265314_10030862
475 Ga0265314_10039249
476 Ga0265342_10017687
477 Ga0316576_10000414
478 Ga0316576_10023381
479 Ga0316578_10085256
480 Ga0307413_10062426
481 Ga0307410_10047788
482 Ga0307409_100023002
483 Ga0307416_100096314
484 Ga0307411_10041009
485 Ga0307507_10000001
486 Ga0307510_10055228
487 Ga0373951_0000011
488 Ga0316574_0035423
489 Ga0316584_0018028
490 Ga0395898_0075898
491 Ga0436364_0222672
492 Ga0395901_0038801
493 Ga0395901_0052245
494 Ga0436365_1229798
495 Ga0436363_1042496
496 Ga0451791_0871926
497 Ga0451833_0377854
498 Ga0451837_0225486
499 Ga0466969_0006472
500 Ga0466965_0008333
501 Ga0466965_0074846
502 Ga0466966_0077914
503 Ga0466961_0007284
504 Ga0466961_0009449
505 Ga0466961_0033644
506 Ga0466961_0037200
507 Ga0466961_0038762
508 Ga0466963_0036249
509 Ga0466963_0042039
510 Ga0466963_0119856
511 Ga0466971_0002659
512 Ga0466970_0001256
513 Ga0466970_0005054
514 Ga0466970_0009076
515 Ga0466970_0029616
516 Ga0466957_0022836
517 Ga0466957_0047569
518 Ga0466960_0000208
519 Ga0466960_0004547
520 Ga0466958_0015187
521 Ga0466967_0002758
522 Ga0466967_0025613
523 Ga0466967_0082426
524 Ga0466967_0105280
525 Ga0466967_0117606
526 Ga0466967_0123853
527 Ga0466967_0133569
528 Ga0466967_0202121
529 Ga0466967_0208672
530 Ga0495603_0098472
531 Ga0495629_0004204
532 Ga0495651_0001092
533 Ga0495650_0008148
534 Ga0495628_0008418
535 Ga0495652_0017443
536 Ga0495652_0063004
537 Ga0495613_0000571
538 Ga0495600_0015025
539 Ga0495604_0012763
540 Ga0496102_0099439
541 Ga0496103_0124130
542 Ga0496104_0082105
543 Ga0496106_0096554
544 Ga0496108_0097600
545 Ga0496108_0136302
546 Ga0496108_0328813
547 Ga0496109_0136246
548 Ga0496110_0031198
549 Ga0496111_0097738
550 Ga0496113_0010693
551 Ga0496114_0067375
552 Ga0496114_0135245
553 Ga0496115_0032461
554 Ga0496117_0016597
555 Ga0496118_0012997
556 Ga0496118_0063498
557 Ga0496122_0000569
558 Ga0496122_0000649
559 Ga0496123_0000275
560 Ga0496123_0051913
561 Ga0496124_0000985
562 Ga0496125_0000015
563 Ga0496126_0016199
564 Ga0496126_0058594
565 Ga0501032_0076722
566 Ga0501034_0003061
567 Ga0501034_0027286
568 Ga0501034_0093023
569 Ga0501038_0001765
570 Ga0501040_0099430
571 Ga0501042_0166467
572 Ga0501046_0003930
573 Ga0501046_0029108
574 Ga0501047_0119192
575 Ga0501067_0009159
576 Ga0501067_0075753
577 Ga0501068_0018449
578 Ga0501069_0097522
579 Ga0501070_0001042
580 Ga0501070_0007713
581 Ga0501070_0009858
582 Ga0501070_0010654
583 Ga0501070_0010820
584 Ga0501070_0061997
585 Ga0501071_0011429
586 Ga0501072_0016830
587 Ga0501072_0074240
588 Ga0501073_0000753
589 Ga0501073_0016540
590 Ga0501074_0001128
591 Ga0501074_0007987
592 Ga0501074_0011719
593 Ga0501079_0002398
594 Ga0501080_0004138
595 Ga0501080_0012332
596 Ga0501080_0027193
597 Ga0501080_0075772
598 Ga0501080_0162712
599 Ga0501083_0057299
600 Ga0501044_0021781
601 Ga0501044_0040045
602 Ga0501044_0065708
603 Ga0501044_0096522
604 nmdc:mga00v17_60072_c1
605 nmdc:mga09592_7651_c1
606 nmdc:mga0qj67_45772_c1
607 nmdc:mga06r32_10593_c1
608 Ga0495601_0014934
609 Ga0495601_0095115
610 Ga0500644_0000317
611 Ga0500644_0031841
612 Ga0500641_0007214
613 Ga0500556_0000284
614 Ga0500593_000507
615 Ga0500616_0000240
616 Ga0500616_0013864
617 Ga0501084_0031229
618 Ga0501084_0082126
619 Ga0501082_0019563
620 Ga0501082_0039780
621 Ga0501082_0052143
622 2644456328
623 2558913221
624 2644036486
625 2644099075
626 2644114956
627 2644505239
628 2644527537
629 2644538061
630 2644667386
631 2645720395
632 2645723336
633 2738867880
634 2740167641
635 2812332195
636 2812362217
637 2816505153
638 2855390680
639 2857712204
640 2863070836
641 2866555215
642 2868091836
643 2870788558
644 2884994512
645 2891332396
646 2932433239
647 2984595283
648 8025480770
649 8054613209
650 8056211761

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00742

Homoserine_dh

Homoserine dehydrogenase

172

354

0.99

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

45

164

0.98

PF01842

ACT

ACT domain

387

451

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dzs-assembly2.cif.gz_D mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9755 2 430
6dzs-assembly2.cif.gz_D mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9733 2 430
6dzs-assembly2.cif.gz_C mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9696 2 430
6dzs-assembly1.cif.gz_B mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9676 2 430
6dzs-assembly2.cif.gz_C mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9674 2 430
ID Description Score Start End Superfamily
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9798 152 301 3.30.360.10
af_P9WPX1_139_304_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9741 137 301 3.30.360.10
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9667 152 301 3.30.360.10
af_P9WPX1_353_430_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.966 350 419 3.30.70.260
af_P9WPX1_139_304_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9626 137 301 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A6J7GLY5-F1-model_v4 Unannotated protein 0.9843 169 432 GO:0004412
GO:0009088
AF-A0A4Q5YUC5-F1-model_v4 deleted 0.9835 158 431
AF-A0A6J7GLY5-F1-model_v4 Unannotated protein 0.9806 169 432 GO:0004412
GO:0009088
AF-A0A7K2P0V1-F1-model_v4 ACT domain-containing protein 0.9754 348 430
AF-A0A6B2DIY0-F1-model_v4 ACT domain-containing protein 0.9737 342 432

Map