F407888

General Info

Members Datasets Scaffolds Average Seq Length
325 231 650 318

Family's Representative Sequence

Representative Sequence 3300028786|Ga0307517_10011749|Ga0307517_1001174911
Length 368
Sequence MTAGTTFTKRTRKVHGACCNGRGGSRAIPRRELSPLVPVLNMAGMDIGVLLPTGTAPWGAADDPRELIAFGRYAERSGFSSLFANDSLISPRVEALTMLAALAPVTETVTLGTAALMPFLRRPIQAAQSLASIDLLSGGRLTVAVGAGFPGRFGRPLYRLSELPWERRFARLDETVALWRALWDGADAFHGEILRFDDIPPTTRPSRAGGPPIWLGGATPAALARTGRLYDGWLPYPPDPADYASGLRDVHKAAADAGRATEDISPALFVSVRIDTDIESGRRTLDDYARATYGMPLEELEKIQAVVTGSADQVREHLGRYVAAGARHIVARLGALDLHSQRDQLERIADLIPAVQGATDRSSRSESS

Samples

Sample ID Description Type Environment
1 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
64 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
65 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
66 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
67 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
72 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
73 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
77 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
80 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
89 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
90 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
91 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
92 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
111 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
112 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
113 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
114 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
115 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
116 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
122 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
151 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
172 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
173 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
174 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
180 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
181 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
185 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
186 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
187 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
188 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
189 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
192 2508501039 Frankia saprophytica CN3 Isolate Nodule
193 2547132424 Nocardia nova SH22a Isolate Unclassified
194 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
195 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
196 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
197 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
198 2619618881 Frankia sp. ACN1ag Isolate Unclassified
199 2619619003 Frankia sp. CpI1-P Isolate Nodule
200 2626541554 Frankia sp. AvcI.1 Isolate Nodule
201 2643221714 Streptomyces sp. Root264 Isolate Unclassified
202 2671180195 Frankia sp. CcI49 Isolate Nodule
203 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
204 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
205 2687453737 Frankia sp. BMG5.36 Isolate Nodule
206 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
207 2773857922 Frankia sp. CcI49 Isolate Nodule
208 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
209 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
210 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
211 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
212 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
213 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
214 2867428634 Streptomyces sp. RP5T Isolate Unclassified
215 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
216 2891562705 Microbispora tritici MT50 Isolate Unclassified
217 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
218 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
219 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
220 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
221 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
222 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
223 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
224 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
225 8002775197 Frankia nepalensis CN7 Isolate Nodule
226 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
227 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
228 8054920844 Frankia tisae Agncl-8 Isolate Nodule
229 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
230 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
231 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.38
Metatranscriptomes 0.31
Isolates 12.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.85
Nodule 3.69
Rhizoplane 0.92
Rhizosphere 78.77
Stem 0
Stem Tuber 0.31
Unclassified 0.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307517_10011749 3300028786 Bacteria 12106
2 rootH1_10010148 3300003316 Bacteria 5796
3 rootL2_10216608 3300003322 Bacteria 3308
4 rootH1_10007092 3300003323 Bacteria 3036
5 Ga0055540_1000022 3300003792 Bacteria 201257
6 Ga0070658_10063087 3300005327 Bacteria 3020
7 Ga0070676_10184336 3300005328 Bacteria 1359
8 Ga0070680_100147551 3300005336 Bacteria 1974
9 Ga0070668_100000284 3300005347 Bacteria 33650
10 Ga0070667_100010533 3300005367 Bacteria 7632
11 Ga0070709_10046852 3300005434 Bacteria 2690
12 Ga0070714_100021342 3300005435 Bacteria 5299
13 Ga0070714_100030981 3300005435 Bacteria 4457
14 Ga0070714_100043784 3300005435 Bacteria 3788
15 Ga0070714_100055771 3300005435 Bacteria 3378
16 Ga0070714_100147706 3300005435 Bacteria 2116
17 Ga0070713_100011586 3300005436 Bacteria 6429
18 Ga0070710_10050762 3300005437 Bacteria 2326
19 Ga0070663_100016193 3300005455 Bacteria 4833
20 Ga0070681_10050578 3300005458 Bacteria 4146
21 Ga0070706_100002848 3300005467 Bacteria 17266
22 Ga0070707_100209756 3300005468 Bacteria 1899
23 Ga0070698_100012357 3300005471 Bacteria 9041
24 Ga0068853_100025247 3300005539 Bacteria 4986
25 Ga0068853_100154028 3300005539 Bacteria 2070
26 Ga0068863_100349368 3300005841 Bacteria 1440
27 Ga0068862_100000009 3300005844 Bacteria 298620
28 Ga0081538_10001128 3300005981 Bacteria 28270
29 Ga0081539_10063087 3300005985 Bacteria 2023
30 Ga0070717_10037305 3300006028 Bacteria 3946
31 Ga0075363_100016715 3300006048 Bacteria 3628
32 Ga0070715_10042575 3300006163 Bacteria 1910
33 Ga0070715_10058222 3300006163 Bacteria 1686
34 Ga0075428_100000326 3300006844 Bacteria 47360
35 Ga0075430_100002124 3300006846 Bacteria 16406
36 Ga0075430_100007444 3300006846 Bacteria 9240
37 Ga0075431_100000884 3300006847 Bacteria 26373
38 Ga0075431_100061363 3300006847 Bacteria 3879
39 Ga0075431_100123539 3300006847 Bacteria 2671
40 Ga0075429_100010113 3300006880 Bacteria 8174
41 Ga0075429_100031743 3300006880 Bacteria 4591
42 Ga0075436_100090804 3300006914 Bacteria 2123
43 Ga0075436_100205017 3300006914 Bacteria 1397
44 Ga0099826_10154229 3300006948 Bacteria 1310
45 Ga0105247_10000479 3300009101 Bacteria 33400
46 Ga0114129_10377571 3300009147 Bacteria 1873
47 Ga0105248_10012481 3300009177 Bacteria 9372
48 Ga0105237_10003985 3300009545 Bacteria 17257
49 Ga0105249_10013413 3300009553 Bacteria 7237
50 Ga0105239_10025155 3300010375 Bacteria 6557
51 Ga0105239_10183382 3300010375 Bacteria 2342
52 Ga0105239_10482757 3300010375 Bacteria 1408
53 Ga0157370_10344246 3300013104 Bacteria 1374
54 Ga0163163_10014958 3300014325 Bacteria 7151
55 Ga0163163_10078523 3300014325 Bacteria 3298
56 Ga0157379_10005479 3300014968 Bacteria 10897
57 Ga0209051_1000033 3300025303 Bacteria 380540
58 Ga0207692_10016455 3300025898 Bacteria 3276
59 Ga0207710_10000137 3300025900 Bacteria 86612
60 Ga0207699_10101932 3300025906 Bacteria 1823
61 Ga0207684_10002046 3300025910 Bacteria 20754
62 Ga0207684_10169344 3300025910 Bacteria 1883
63 Ga0207693_10103763 3300025915 Bacteria 2230
64 Ga0207646_10007533 3300025922 Bacteria 11044
65 Ga0207700_10042609 3300025928 Bacteria 3329
66 Ga0207700_10092864 3300025928 Bacteria 2387
67 Ga0207664_10034869 3300025929 Bacteria 3878
68 Ga0207664_10058193 3300025929 Bacteria 3074
69 Ga0207664_10059370 3300025929 Bacteria 3045
70 Ga0207664_10094439 3300025929 Bacteria 2458
71 Ga0207665_10060328 3300025939 Bacteria 2568
72 Ga0207711_10001547 3300025941 Bacteria 21290
73 Ga0207661_10220103 3300025944 Bacteria 1678
74 Ga0207712_10006722 3300025961 Bacteria 7252
75 Ga0207668_10000805 3300025972 Bacteria 19199
76 Ga0207658_10004253 3300025986 Bacteria 9977
77 Ga0207639_10033574 3300026041 Bacteria 3786
78 Ga0207678_10000222 3300026067 Bacteria 50828
79 Ga0207678_10036198 3300026067 Bacteria 4297
80 Ga0207674_10024771 3300026116 Bacteria 6405
81 Ga0207674_10071633 3300026116 Bacteria 3482
82 Ga0268265_10000050 3300028380 Bacteria 175787
83 Ga0307515_10000025 3300028794 Bacteria 390205
84 Ga0307515_10019601 3300028794 Bacteria 12155
85 Ga0307511_10009909 3300030521 Bacteria 9484
86 Ga0307512_10078876 3300030522 Bacteria 2383
87 Ga0265327_10000406 3300031251 Bacteria 79464
88 Ga0307513_10002872 3300031456 Bacteria 23596
89 Ga0307509_10038126 3300031507 Bacteria 5246
90 Ga0307509_10072575 3300031507 Bacteria 3585
91 Ga0307509_10073226 3300031507 Bacteria 3567
92 Ga0307516_10002263 3300031730 Bacteria 25980
93 Ga0307516_10016198 3300031730 Bacteria 7809
94 Ga0307516_10063335 3300031730 Bacteria 3580
95 Ga0307518_10005518 3300031838 Bacteria 9052
96 Ga0307507_10007961 3300033179 Bacteria 14965
97 Ga0307507_10015129 3300033179 Bacteria 9112
98 Ga0316212_1002552 3300033547 Bacteria 2600
99 Ga0373944_0000996 3300035089 Bacteria 7015
100 Ga0373944_0031008 3300035089 Bacteria 1607
101 Ga0373936_0002374 3300035113 Bacteria 7045
102 Ga0373945_0000010 3300035116 Bacteria 41491
103 Ga0373953_0103378 3300035117 Bacteria 1200
104 Ga0373943_0001146 3300035170 Bacteria 11820
105 Ga0373946_0004723 3300035171 Bacteria 4894
106 Ga0373955_0078593 3300035172 Bacteria 1859
107 Ga0373955_0182290 3300035172 Bacteria 1246
108 Ga0373924_0005489 3300035410 Bacteria 4494
109 Ga0373935_0015540 3300035692 Bacteria 4602
110 Ga0373927_0005506 3300035695 Bacteria 8721
111 Ga0373933_0201882 3300035724 Bacteria 1272
112 Ga0373947_0001234 3300035725 Bacteria 15729
113 Ga0373937_0045293 3300036401 Bacteria 4020
114 Ga0372808_008661 3300036459 Bacteria 1413
115 Ga0373925_0000017 3300037068 Bacteria 174289
116 Ga0373925_0021630 3300037068 Bacteria 4689
117 Ga0373925_0374659 3300037068 Bacteria 1158
118 Ga0395898_0028697 3300037466 Bacteria 5576
119 Ga0436364_0129384 3300037853 Bacteria 2505
120 Ga0439448_0062702 3300042005 Bacteria 1230
121 Ga0450903_003284 3300042138 Bacteria 2809
122 Ga0439458_0002549 3300042157 Bacteria 4411
123 Ga0466969_0053510 3300044656 Bacteria 1980
124 Ga0466972_0002469 3300044658 Bacteria 9146
125 Ga0466972_0015314 3300044658 Bacteria 3833
126 Ga0466972_0092206 3300044658 Bacteria 1436
127 Ga0466965_0031471 3300044683 Bacteria 2588
128 Ga0466965_0062426 3300044683 Bacteria 1864
129 Ga0466966_0001978 3300044684 Bacteria 13278
130 Ga0466961_0198565 3300044693 Bacteria 1241
131 Ga0466963_0049069 3300044694 Bacteria 2791
132 Ga0466963_0324625 3300044694 Bacteria 1083
133 Ga0466968_0033422 3300044735 Bacteria 2143
134 Ga0466970_0042996 3300044765 Bacteria 2403
135 Ga0466970_0053624 3300044765 Bacteria 2153
136 Ga0466970_0058747 3300044765 Bacteria 2059
137 Ga0466970_0250003 3300044765 Bacteria 993
138 Ga0466957_0041841 3300044842 Bacteria 2771
139 Ga0466960_0015614 3300044901 Bacteria 3277
140 Ga0466958_0014866 3300045836 Bacteria 4449
141 Ga0466967_0030767 3300045976 Bacteria 4508
142 Ga0466967_0228875 3300045976 Bacteria 1769
143 Ga0495592_0032867 3300046454 Bacteria 3913
144 Ga0495603_0023572 3300046455 Bacteria 3722
145 Ga0495629_0006663 3300046459 Bacteria 8547
146 Ga0495629_0043538 3300046459 Bacteria 3151
147 Ga0495641_0005656 3300046461 Bacteria 8342
148 Ga0495641_0101702 3300046461 Unclassified 1282
149 Ga0495651_0000507 3300046462 Bacteria 30286
150 Ga0495651_0007024 3300046462 Bacteria 8613
151 Ga0495651_0092173 3300046462 Bacteria 2270
152 Ga0495653_0021646 3300046463 Bacteria 5207
153 Ga0495653_0036768 3300046463 Bacteria 3854
154 Ga0495653_0097055 3300046463 Bacteria 2142
155 Ga0495582_0023884 3300046473 Bacteria 3343
156 Ga0495662_0001586 3300046476 Bacteria 11297
157 Ga0495662_0008092 3300046476 Bacteria 5180
158 Ga0495664_0005419 3300046477 Bacteria 7008
159 Ga0495664_0016073 3300046477 Bacteria 4261
160 Ga0495585_0051491 3300046492 Bacteria 2282
161 Ga0495594_0031573 3300046499 Bacteria 2872
162 Ga0495608_0017516 3300046511 Bacteria 4954
163 Ga0495608_0045713 3300046511 Bacteria 2916
164 Ga0495618_0004162 3300046514 Bacteria 8931
165 Ga0495618_0008142 3300046514 Bacteria 6351
166 Ga0495618_0029318 3300046514 Bacteria 3433
167 Ga0495628_0056586 3300046516 Bacteria 3086
168 Ga0495628_0063292 3300046516 Bacteria 2899
169 Ga0495628_0112123 3300046516 Bacteria 2097
170 Ga0495630_0024130 3300046517 Bacteria 4497
171 Ga0495630_0052529 3300046517 Bacteria 3051
172 Ga0495630_0066573 3300046517 Bacteria 2708
173 Ga0495632_0052326 3300046519 Bacteria 2008
174 Ga0495632_0094693 3300046519 Bacteria 1412
175 Ga0495652_0028231 3300046529 Bacteria 4939
176 Ga0495652_0035015 3300046529 Bacteria 4371
177 Ga0495640_0016412 3300046533 Bacteria 5539
178 Ga0495640_0041388 3300046533 Bacteria 3220
179 Ga0495587_0050271 3300046536 Bacteria 2466
180 Ga0495645_0013774 3300046543 Bacteria 5729
181 Ga0495645_0016134 3300046543 Bacteria 5324
182 Ga0495667_0017665 3300046559 Bacteria 4818
183 Ga0495634_0012575 3300046642 Bacteria 6125
184 Ga0495634_0039785 3300046642 Bacteria 3200
185 Ga0495625_0003951 3300046660 Bacteria 14246
186 Ga0495635_0000459 3300046663 Bacteria 25781
187 Ga0495635_0000747 3300046663 Bacteria 21036
188 Ga0495635_0021657 3300046663 Bacteria 4481
189 Ga0495635_0040777 3300046663 Bacteria 3207
190 Ga0495588_0050662 3300046674 Bacteria 2137
191 Ga0495588_0118455 3300046674 Bacteria 1395
192 Ga0495657_0004309 3300046675 Bacteria 11363
193 Ga0495657_0015011 3300046675 Bacteria 5681
194 Ga0495657_0019475 3300046675 Bacteria 4894
195 Ga0495599_0003696 3300046678 Bacteria 8965
196 Ga0495599_0071582 3300046678 Bacteria 2164
197 Ga0495646_0003468 3300046680 Bacteria 9814
198 Ga0495646_0027306 3300046680 Bacteria 3581
199 Ga0495624_0086188 3300046690 Bacteria 1940
200 Ga0495671_0022884 3300046692 Bacteria 3268
201 Ga0495600_0010854 3300046809 Bacteria 5664
202 Ga0495581_0041645 3300047315 Bacteria 2658
203 Ga0495581_0114033 3300047315 Bacteria 1572
204 Ga0495581_0127699 3300047315 Bacteria 1481
205 Ga0495604_0000399 3300047317 Bacteria 39232
206 Ga0495604_0019068 3300047317 Bacteria 5493
207 Ga0495604_0049076 3300047317 Bacteria 3281
208 Ga0495674_0006061 3300047319 Bacteria 11602
209 Ga0495674_0042350 3300047319 Bacteria 4062
210 Ga0495674_0357807 3300047319 Bacteria 1184
211 Ga0495676_0003609 3300047321 Bacteria 14041
212 Ga0495676_0009400 3300047321 Bacteria 8906
213 Ga0495680_0008718 3300047322 Bacteria 9189
214 Ga0495680_0022804 3300047322 Bacteria 5213
215 Ga0495687_001885 3300047443 Bacteria 18089
216 Ga0495675_0027583 3300047444 Bacteria 3619
217 Ga0495681_0004765 3300047470 Bacteria 9190
218 Ga0495684_0028373 3300047471 Bacteria 4297
219 Ga0495684_0046124 3300047471 Bacteria 3334
220 Ga0495593_0001809 3300047673 Bacteria 12709
221 Ga0495593_0024788 3300047673 Bacteria 3321
222 Ga0495602_0035649 3300048088 Bacteria 4637
223 Ga0495614_0001664 3300048089 Bacteria 9697
224 Ga0495614_0003327 3300048089 Bacteria 7184
225 Ga0496102_0050142 3300048905 Bacteria 3800
226 Ga0496112_0023800 3300048915 Bacteria 5858
227 Ga0496112_0584733 3300048915 Unclassified 1049
228 Ga0496118_0000421 3300048921 Bacteria 70346
229 Ga0496119_0010202 3300048922 Bacteria 7928
230 Ga0496120_0007789 3300048923 Bacteria 7911
231 Ga0496126_0127416 3300048929 Bacteria 2202
232 Ga0501032_0095692 3300049569 Bacteria 1968
233 Ga0501034_0006102 3300049571 Bacteria 13009
234 Ga0501034_0068010 3300049571 Bacteria 3573
235 Ga0501036_0046623 3300049572 Bacteria 3670
236 Ga0501037_0073675 3300049573 Bacteria 2482
237 Ga0501038_0017829 3300049574 Bacteria 6415
238 Ga0501038_0118530 3300049574 Bacteria 2185
239 Ga0501041_0026875 3300049577 Bacteria 3465
240 Ga0501042_0010101 3300049578 Bacteria 6313
241 Ga0501043_0004110 3300049579 Bacteria 11884
242 Ga0501043_0121729 3300049579 Bacteria 2046
243 Ga0501046_0057334 3300049580 Bacteria 3055
244 Ga0501046_0344705 3300049580 Bacteria 1082
245 Ga0501047_0004945 3300049581 Bacteria 12514
246 Ga0501047_0021460 3300049581 Bacteria 6201
247 Ga0501047_0058559 3300049581 Bacteria 3721
248 Ga0501047_0104170 3300049581 Bacteria 2717
249 Ga0501047_0422737 3300049581 Bacteria 1164
250 Ga0501048_0009197 3300049582 Bacteria 7424
251 Ga0501048_0107594 3300049582 Bacteria 1968
252 Ga0501068_0060728 3300049584 Bacteria 2295
253 Ga0501069_0042287 3300049585 Bacteria 2520
254 Ga0501071_0037673 3300049587 Bacteria 3453
255 Ga0501072_0014606 3300049588 Bacteria 6019
256 Ga0501073_0031972 3300049589 Bacteria 3754
257 Ga0501074_0018404 3300049590 Bacteria 5073
258 Ga0501076_0055727 3300049592 Bacteria 3135
259 Ga0501077_0060716 3300049593 Bacteria 2399
260 Ga0501079_0232356 3300049741 Bacteria 1440
261 Ga0501080_0306914 3300049742 Bacteria 1438
262 Ga0501083_0030042 3300049744 Bacteria 3734
263 Ga0501035_0002795 3300049822 Bacteria 16878
264 Ga0501044_0040439 3300049823 Bacteria 4859
265 Ga0501044_0080735 3300049823 Bacteria 3294
266 Ga0501045_0127543 3300049824 Bacteria 1890
267 nmdc:mga05p37_27257_c1 3300050507 Bacteria 6956
268 nmdc:mga05p37_544436_c1 3300050507 Bacteria 1323
269 nmdc:mga09592_42923_c1 3300050508 Bacteria 3804
270 nmdc:mga09592_929_c1 3300050508 Bacteria 22999
271 nmdc:mga0qj67_2621_c1 3300050509 Bacteria 12888
272 nmdc:mga06r32_216_c1 3300050510 Bacteria 46547
273 nmdc:mga06r32_269215_c1 3300050510 Bacteria 1691
274 nmdc:mga06r32_6601_c1 3300050510 Bacteria 10425
275 nmdc:mga0rr50_283911_c1 3300050513 Bacteria 1382
276 nmdc:mga08x19_158634_c1 3300050514 Bacteria 1535
277 Ga0495595_0007437 3300053084 Bacteria 4485
278 Ga0495619_0073923 3300053085 Bacteria 2285
279 Ga0495619_0230864 3300053085 Bacteria 1282
280 Ga0500640_001808 3300053095 Bacteria 6740
281 Ga0500560_003431 3300053107 Bacteria 3203
282 Ga0500600_0162414 3300053149 Bacteria 1097
283 Ga0501084_0059545 3300054114 Bacteria 3196
284 Ga0501082_0011185 3300060353 Bacteria 7711
285 Ga0466962_0099547 3300061719 Bacteria 1396
286 2508675676 2508501039 Bacteria 9978592
287 2548695803 2547132424 Bacteria 8348532
288 2579856530 2579778521 Bacteria 7624758
289 2585311467 2582581313 Bacteria 10042643
290 2585314382 2582581314 Bacteria 11452267
291 2586058173 2585427649 Bacteria 9053857
292 2619857429 2619618881 Bacteria 7521104
293 2620352758 2619619003 Bacteria 7619552
294 2626639060 2626541554 Bacteria 7741902
295 2644629005 2643221714 Bacteria 9015452
296 2671839270 2671180195 Bacteria 9757215
297 2676205401 2675902999 Bacteria 9438463
298 2686540085 2684623035 Bacteria 8032739
299 2689962470 2687453737 Bacteria 11203906
300 2774849976 2773857921 Bacteria 9435764
301 2774857426 2773857922 Bacteria 9757215
302 2786666456 2786546132 Bacteria 10419719
303 2808919446 2808606375 Bacteria 9466072
304 2809592985 2808606522 Bacteria 9488490
305 2812476693 2811994917 Bacteria 7761064
306 2856745120 2856741275 Bacteria 8096094
307 2862281724 2862281513 Bacteria 9621493
308 2867435147 2867428634 Bacteria 9590268
309 2877676757 2877676314 Bacteria 9512378
310 2891568743 2891562705 Bacteria 8039471
311 2895889224 2895880812 Bacteria 11255272
312 2899370295 2899370129 Bacteria 6781179
313 2902796711 2902792274 Bacteria 7270173
314 2915768252 2915768154 Bacteria 8424322
315 2917739838 2917736166 Bacteria 9690793
316 3002999107 3002998708 Bacteria 11715108
317 3006325997 3006321560 Bacteria 8247479
318 3006501387 3006493962 Bacteria 8825450
319 8002781528 8002775197 Bacteria 10728764
320 8003318212 8003314358 Bacteria 10575343
321 8054917502 8054913762 Bacteria 7713009
322 8054923890 8054920844 Bacteria 7068637
323 8055068791 8055066027 Bacteria 9479577
324 8055177896 8055172936 Bacteria 9305943
325 8056830634 8056829672 Bacteria 9045328
326 Ga0307517_10011749
327 rootH1_10010148
328 rootL2_10216608
329 rootH1_10007092
330 Ga0055540_1000022
331 Ga0070658_10063087
332 Ga0070676_10184336
333 Ga0070680_100147551
334 Ga0070668_100000284
335 Ga0070667_100010533
336 Ga0070709_10046852
337 Ga0070714_100021342
338 Ga0070714_100030981
339 Ga0070714_100043784
340 Ga0070714_100055771
341 Ga0070714_100147706
342 Ga0070713_100011586
343 Ga0070710_10050762
344 Ga0070663_100016193
345 Ga0070681_10050578
346 Ga0070706_100002848
347 Ga0070707_100209756
348 Ga0070698_100012357
349 Ga0068853_100025247
350 Ga0068853_100154028
351 Ga0068863_100349368
352 Ga0068862_100000009
353 Ga0081538_10001128
354 Ga0081539_10063087
355 Ga0070717_10037305
356 Ga0075363_100016715
357 Ga0070715_10042575
358 Ga0070715_10058222
359 Ga0075428_100000326
360 Ga0075430_100002124
361 Ga0075430_100007444
362 Ga0075431_100000884
363 Ga0075431_100061363
364 Ga0075431_100123539
365 Ga0075429_100010113
366 Ga0075429_100031743
367 Ga0075436_100090804
368 Ga0075436_100205017
369 Ga0099826_10154229
370 Ga0105247_10000479
371 Ga0114129_10377571
372 Ga0105248_10012481
373 Ga0105237_10003985
374 Ga0105249_10013413
375 Ga0105239_10025155
376 Ga0105239_10183382
377 Ga0105239_10482757
378 Ga0157370_10344246
379 Ga0163163_10014958
380 Ga0163163_10078523
381 Ga0157379_10005479
382 Ga0209051_1000033
383 Ga0207692_10016455
384 Ga0207710_10000137
385 Ga0207699_10101932
386 Ga0207684_10002046
387 Ga0207684_10169344
388 Ga0207693_10103763
389 Ga0207646_10007533
390 Ga0207700_10042609
391 Ga0207700_10092864
392 Ga0207664_10034869
393 Ga0207664_10058193
394 Ga0207664_10059370
395 Ga0207664_10094439
396 Ga0207665_10060328
397 Ga0207711_10001547
398 Ga0207661_10220103
399 Ga0207712_10006722
400 Ga0207668_10000805
401 Ga0207658_10004253
402 Ga0207639_10033574
403 Ga0207678_10000222
404 Ga0207678_10036198
405 Ga0207674_10024771
406 Ga0207674_10071633
407 Ga0268265_10000050
408 Ga0307515_10000025
409 Ga0307515_10019601
410 Ga0307511_10009909
411 Ga0307512_10078876
412 Ga0265327_10000406
413 Ga0307513_10002872
414 Ga0307509_10038126
415 Ga0307509_10072575
416 Ga0307509_10073226
417 Ga0307516_10002263
418 Ga0307516_10016198
419 Ga0307516_10063335
420 Ga0307518_10005518
421 Ga0307507_10007961
422 Ga0307507_10015129
423 Ga0316212_1002552
424 Ga0373944_0000996
425 Ga0373944_0031008
426 Ga0373936_0002374
427 Ga0373945_0000010
428 Ga0373953_0103378
429 Ga0373943_0001146
430 Ga0373946_0004723
431 Ga0373955_0078593
432 Ga0373955_0182290
433 Ga0373924_0005489
434 Ga0373935_0015540
435 Ga0373927_0005506
436 Ga0373933_0201882
437 Ga0373947_0001234
438 Ga0373937_0045293
439 Ga0372808_008661
440 Ga0373925_0000017
441 Ga0373925_0021630
442 Ga0373925_0374659
443 Ga0395898_0028697
444 Ga0436364_0129384
445 Ga0439448_0062702
446 Ga0450903_003284
447 Ga0439458_0002549
448 Ga0466969_0053510
449 Ga0466972_0002469
450 Ga0466972_0015314
451 Ga0466972_0092206
452 Ga0466965_0031471
453 Ga0466965_0062426
454 Ga0466966_0001978
455 Ga0466961_0198565
456 Ga0466963_0049069
457 Ga0466963_0324625
458 Ga0466968_0033422
459 Ga0466970_0042996
460 Ga0466970_0053624
461 Ga0466970_0058747
462 Ga0466970_0250003
463 Ga0466957_0041841
464 Ga0466960_0015614
465 Ga0466958_0014866
466 Ga0466967_0030767
467 Ga0466967_0228875
468 Ga0495592_0032867
469 Ga0495603_0023572
470 Ga0495629_0006663
471 Ga0495629_0043538
472 Ga0495641_0005656
473 Ga0495641_0101702
474 Ga0495651_0000507
475 Ga0495651_0007024
476 Ga0495651_0092173
477 Ga0495653_0021646
478 Ga0495653_0036768
479 Ga0495653_0097055
480 Ga0495582_0023884
481 Ga0495662_0001586
482 Ga0495662_0008092
483 Ga0495664_0005419
484 Ga0495664_0016073
485 Ga0495585_0051491
486 Ga0495594_0031573
487 Ga0495608_0017516
488 Ga0495608_0045713
489 Ga0495618_0004162
490 Ga0495618_0008142
491 Ga0495618_0029318
492 Ga0495628_0056586
493 Ga0495628_0063292
494 Ga0495628_0112123
495 Ga0495630_0024130
496 Ga0495630_0052529
497 Ga0495630_0066573
498 Ga0495632_0052326
499 Ga0495632_0094693
500 Ga0495652_0028231
501 Ga0495652_0035015
502 Ga0495640_0016412
503 Ga0495640_0041388
504 Ga0495587_0050271
505 Ga0495645_0013774
506 Ga0495645_0016134
507 Ga0495667_0017665
508 Ga0495634_0012575
509 Ga0495634_0039785
510 Ga0495625_0003951
511 Ga0495635_0000459
512 Ga0495635_0000747
513 Ga0495635_0021657
514 Ga0495635_0040777
515 Ga0495588_0050662
516 Ga0495588_0118455
517 Ga0495657_0004309
518 Ga0495657_0015011
519 Ga0495657_0019475
520 Ga0495599_0003696
521 Ga0495599_0071582
522 Ga0495646_0003468
523 Ga0495646_0027306
524 Ga0495624_0086188
525 Ga0495671_0022884
526 Ga0495600_0010854
527 Ga0495581_0041645
528 Ga0495581_0114033
529 Ga0495581_0127699
530 Ga0495604_0000399
531 Ga0495604_0019068
532 Ga0495604_0049076
533 Ga0495674_0006061
534 Ga0495674_0042350
535 Ga0495674_0357807
536 Ga0495676_0003609
537 Ga0495676_0009400
538 Ga0495680_0008718
539 Ga0495680_0022804
540 Ga0495687_001885
541 Ga0495675_0027583
542 Ga0495681_0004765
543 Ga0495684_0028373
544 Ga0495684_0046124
545 Ga0495593_0001809
546 Ga0495593_0024788
547 Ga0495602_0035649
548 Ga0495614_0001664
549 Ga0495614_0003327
550 Ga0496102_0050142
551 Ga0496112_0023800
552 Ga0496112_0584733
553 Ga0496118_0000421
554 Ga0496119_0010202
555 Ga0496120_0007789
556 Ga0496126_0127416
557 Ga0501032_0095692
558 Ga0501034_0006102
559 Ga0501034_0068010
560 Ga0501036_0046623
561 Ga0501037_0073675
562 Ga0501038_0017829
563 Ga0501038_0118530
564 Ga0501041_0026875
565 Ga0501042_0010101
566 Ga0501043_0004110
567 Ga0501043_0121729
568 Ga0501046_0057334
569 Ga0501046_0344705
570 Ga0501047_0004945
571 Ga0501047_0021460
572 Ga0501047_0058559
573 Ga0501047_0104170
574 Ga0501047_0422737
575 Ga0501048_0009197
576 Ga0501048_0107594
577 Ga0501068_0060728
578 Ga0501069_0042287
579 Ga0501071_0037673
580 Ga0501072_0014606
581 Ga0501073_0031972
582 Ga0501074_0018404
583 Ga0501076_0055727
584 Ga0501077_0060716
585 Ga0501079_0232356
586 Ga0501080_0306914
587 Ga0501083_0030042
588 Ga0501035_0002795
589 Ga0501044_0040439
590 Ga0501044_0080735
591 Ga0501045_0127543
592 nmdc:mga05p37_27257_c1
593 nmdc:mga05p37_544436_c1
594 nmdc:mga09592_42923_c1
595 nmdc:mga09592_929_c1
596 nmdc:mga0qj67_2621_c1
597 nmdc:mga06r32_216_c1
598 nmdc:mga06r32_269215_c1
599 nmdc:mga06r32_6601_c1
600 nmdc:mga0rr50_283911_c1
601 nmdc:mga08x19_158634_c1
602 Ga0495595_0007437
603 Ga0495619_0073923
604 Ga0495619_0230864
605 Ga0500640_001808
606 Ga0500560_003431
607 Ga0500600_0162414
608 Ga0501084_0059545
609 Ga0501082_0011185
610 Ga0466962_0099547
611 2508675676
612 2548695803
613 2579856530
614 2585311467
615 2585314382
616 2586058173
617 2619857429
618 2620352758
619 2626639060
620 2644629005
621 2671839270
622 2676205401
623 2686540085
624 2689962470
625 2774849976
626 2774857426
627 2786666456
628 2808919446
629 2809592985
630 2812476693
631 2856745120
632 2862281724
633 2867435147
634 2877676757
635 2891568743
636 2895889224
637 2899370295
638 2902796711
639 2915768252
640 2917739838
641 3002999107
642 3006325997
643 3006501387
644 8002781528
645 8003318212
646 8054917502
647 8054923890
648 8055068791
649 8055177896
650 8056830634

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

45

328

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c8n-assembly2.cif.gz_D crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.8489 4 314
5lxe-assembly1.cif.gz_A f420-dependent glucose-6-phosphate dehydrogenase from rhodococcus jostii rha1 0.8401 4 315
1rhc-assembly1.cif.gz_A-2 f420-dependent secondary alcohol dehydrogenase in complex with an f420-acetone adduct 0.8359 3 313
1luc-assembly1.cif.gz_A bacterial luciferase 0.8355 4 313
5lxe-assembly1.cif.gz_B f420-dependent glucose-6-phosphate dehydrogenase from rhodococcus jostii rha1 0.8352 4 315
ID Description Score Start End Superfamily
1rhcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8359 3 313 3.20.20.30
3fgcC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.821 4 313 3.20.20.30
af_Q2G136_3_353_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8204 4 319 3.20.20.30
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8191 24 310 3.20.20.30
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8131 24 310 3.20.20.30
ID Description Score Start End GO Terms
AF-W2ET76-F1-model_v4 N5,N10-methylene tetrahydromethanopterin reductase 0.9832 2 314 GO:0016705
AF-W2ET76-F1-model_v4 N5,N10-methylene tetrahydromethanopterin reductase 0.9589 2 314 GO:0016705
AF-A0A538F9R3-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9341 1 317 GO:0016705
AF-A0A543JCD2-F1-model_v4 Alkanesulfonate monooxygenase SsuD/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (Luciferase family) 0.9253 3 314 GO:0004497
GO:0016705
AF-A0A843T6L5-F1-model_v4 TIGR03619 family F420-dependent LLM class oxidoreductase (EC 1.-.-.-) 0.9245 4 320 GO:0016705

Map