F407452

General Info

Members Datasets Scaffolds Average Seq Length
324 235 648 283

Family's Representative Sequence

Representative Sequence 3300035691|Ga0373931_0003315|Ga0373931_0003315_814_1770
Length 318
Sequence MSAMPADPAAASPDDAMEHLLTRRRFGIGLVVAAAGGRLAACAGAPQEPKVRAVDCHAHVFRRDLPMPDRRRAPSGYDATPEDFLSLLDAHRVSHGVLVQPSFLGTDNSYLVDALSRHRERLRGIAVIEPTTARDRLDALQHAGAVGIRLNLVGLPAPDFASPAWQALLEDLRGRRWHVEVHQVASGLRAVMAPLLDAGLDVVVDHFGRPDETLGVDDPGFRYLLSTGASRRVWVKLSAAYRNGGHGAGEATALAAVPLLKASHGLDRLVWGSDWPHTLFERAADYATERGLLDRWLPDAGERDRVLRVTPARLYRFV

Samples

Sample ID Description Type Environment
1 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
11 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
12 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
33 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
62 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
68 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
69 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
105 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
110 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
121 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
124 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
125 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
126 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
127 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
128 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
133 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
134 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
135 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
138 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
139 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
140 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
141 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
142 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
143 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
144 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
145 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
146 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
147 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
148 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
149 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
150 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
151 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
152 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
153 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
154 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
155 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
156 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
157 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
158 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
159 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
160 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
161 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
162 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
163 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
164 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
165 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
166 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
167 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
168 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
169 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
170 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
171 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
172 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
173 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
174 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
175 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
176 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
177 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
178 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
179 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
180 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
181 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
182 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
183 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
184 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
185 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
186 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
187 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
188 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
191 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
192 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
193 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
194 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
195 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
196 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
197 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
198 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
199 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
200 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
201 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
202 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
203 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
204 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
205 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
206 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
207 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
208 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
209 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
210 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
211 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
212 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
213 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
214 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
215 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
216 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
217 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
218 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
219 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
220 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
221 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
222 2818991446 Variovorax sp. 1180 Isolate Unclassified
223 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
224 2831864461 Roseateles noduli HZ7 Isolate Nodule
225 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
226 2885198086 Variovorax sp. 679 Isolate Unclassified
227 2885211737 Variovorax sp. 553 Isolate Unclassified
228 2899924645 Variovorax sp. 369 Isolate Unclassified
229 2928037797 Variovorax sp. 1126 Isolate Unclassified
230 2928044640 Variovorax sp. 1128 Isolate Unclassified
231 2928051484 Variovorax sp. 1133 Isolate Unclassified
232 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
233 2928070936 Variovorax gossypii 1167 Isolate Unclassified
234 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
235 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.28
Metatranscriptomes 0.93
Isolates 6.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.46
Nodule 0.62
Rhizoplane 3.4
Rhizosphere 60.19
Stem 0
Stem Tuber 0
Unclassified 0.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373931_0003315 3300035691 Bacteria 7209
2 JGI25155J39150_1000159 3300002704 Bacteria 30271
3 JGI25156J39149_1005466 3300002705 Bacteria 3653
4 JGI25154J39366_1000244 3300002738 Bacteria 35477
5 JGI25154J39366_1000960 3300002738 Bacteria 11877
6 JGI25157J39369_1006409 3300002741 Bacteria 1794
7 JGI25152J39213_1016983 3300002773 Bacteria 1386
8 rootH2_10025652 3300003320 Bacteria 6251
9 rootL2_10007230 3300003322 Bacteria 22552
10 JGI25161J50226_1002916 3300003374 Bacteria 4151
11 Ga0006562J51391_1086896 3300003578 Bacteria 2210
12 Ga0055535_1000751 3300003761 Bacteria 24202
13 Ga0055542_1000013 3300003762 Bacteria 387560
14 Ga0055529_1000433 3300003763 Bacteria 42325
15 Ga0055529_1000701 3300003763 Bacteria 22558
16 Ga0055529_1000772 3300003763 Bacteria 20105
17 Ga0055526_1002903 3300003771 Bacteria 11291
18 Ga0055526_1010945 3300003771 Bacteria 4151
19 Ga0055524_1022592 3300003775 Bacteria 2050
20 Ga0055536_1004567 3300003781 Bacteria 7030
21 Ga0055536_1010129 3300003781 Bacteria 3787
22 Ga0055530_10004654 3300003791 Bacteria 6965
23 Ga0055530_10022457 3300003791 Bacteria 1836
24 Ga0055540_1003998 3300003792 Bacteria 6864
25 Ga0055540_1007811 3300003792 Bacteria 3964
26 Ga0055531_10006151 3300003794 Bacteria 6868
27 Ga0055531_10012614 3300003794 Bacteria 3964
28 Ga0055543_1004184 3300004625 Bacteria 4002
29 Ga0055543_1007703 3300004625 Bacteria 2460
30 Ga0065165_1000059 3300005262 Bacteria 182314
31 Ga0070658_10006150 3300005327 Bacteria 9732
32 Ga0070676_10004533 3300005328 Bacteria 7316
33 Ga0070670_100047100 3300005331 Bacteria 3709
34 Ga0068869_100010541 3300005334 Bacteria 6031
35 Ga0068869_100280246 3300005334 Bacteria 1340
36 Ga0068868_100287999 3300005338 Bacteria 1392
37 Ga0070660_100323925 3300005339 Bacteria 1266
38 Ga0070689_100186344 3300005340 Bacteria 1688
39 Ga0070675_100184472 3300005354 Bacteria 1805
40 Ga0070671_100053107 3300005355 Bacteria 3369
41 Ga0070659_100023300 3300005366 Bacteria 4736
42 Ga0070700_100422924 3300005441 Bacteria 1007
43 Ga0070685_10446395 3300005466 Bacteria 905
44 Ga0070665_100172886 3300005548 Bacteria 2161
45 Ga0068855_100002626 3300005563 Bacteria 22139
46 Ga0068857_100133662 3300005577 Bacteria 2239
47 Ga0068852_100014403 3300005616 Bacteria 6088
48 Ga0068852_100383465 3300005616 Bacteria 1379
49 Ga0068851_10023794 3300005834 Bacteria 2995
50 Ga0097621_100054554 3300006237 Bacteria 3260
51 Ga0075370_10063850 3300006353 Bacteria 2099
52 Ga0068871_100194354 3300006358 Bacteria 1749
53 Ga0105244_10010828 3300009036 Bacteria 5506
54 Ga0105240_10009098 3300009093 Bacteria 14100
55 Ga0105240_10163749 3300009093 Bacteria 2639
56 Ga0105245_10030100 3300009098 Bacteria 4799
57 Ga0105243_10341202 3300009148 Bacteria 1372
58 Ga0105241_10254455 3300009174 Unclassified 1490
59 Ga0105237_10001612 3300009545 Bacteria 29291
60 Ga0105237_10007804 3300009545 Bacteria 11665
61 Ga0105237_10060265 3300009545 Bacteria 3797
62 Ga0105238_10300695 3300009551 Unclassified 1588
63 Ga0105239_10001663 3300010375 Bacteria 29291
64 Ga0105239_10007587 3300010375 Bacteria 12431
65 Ga0105246_10040457 3300011119 Bacteria 3146
66 Ga0157373_10039367 3300013100 Bacteria 3385
67 Ga0157371_10037352 3300013102 Bacteria 3476
68 Ga0157370_10002724 3300013104 Bacteria 21137
69 Ga0157370_10066449 3300013104 Bacteria 3410
70 Ga0157370_10392263 3300013104 Bacteria 1278
71 Ga0157369_10019724 3300013105 Bacteria 7544
72 Ga0157369_10025487 3300013105 Bacteria 6567
73 Ga0157374_10038447 3300013296 Bacteria 4399
74 Ga0157372_10036108 3300013307 Bacteria 5446
75 Ga0157372_10057751 3300013307 Bacteria 4338
76 Ga0157375_10027121 3300013308 Bacteria 5350
77 Ga0157375_10915289 3300013308 Bacteria 1020
78 Ga0163161_10001624 3300017792 Bacteria 16537
79 Ga0163161_10031063 3300017792 Bacteria 3804
80 Ga0206353_11757722 3300020082 Bacteria 2117
81 Ga0224712_10024464 3300022467 Bacteria 2110
82 Ga0209435_100107 3300025206 Bacteria 32701
83 Ga0209436_103343 3300025208 Bacteria 4311
84 Ga0209258_100020 3300025242 Bacteria 565241
85 Ga0209258_100189 3300025242 Bacteria 128268
86 Ga0209258_100554 3300025242 Bacteria 33123
87 Ga0209646_1000020 3300025246 Bacteria 462204
88 Ga0209646_1000106 3300025246 Bacteria 163422
89 Ga0209026_1001963 3300025250 Bacteria 8263
90 Ga0209148_1000031 3300025254 Bacteria 564601
91 Ga0209759_1000277 3300025256 Bacteria 72032
92 Ga0209759_1002030 3300025256 Bacteria 9567
93 Ga0209129_1010959 3300025258 Bacteria 2210
94 Ga0209565_1004312 3300025263 Bacteria 4367
95 Ga0209565_1004742 3300025263 Bacteria 4080
96 Ga0209455_1000092 3300025272 Bacteria 220516
97 Ga0209673_1001328 3300025273 Bacteria 24806
98 Ga0209130_1001428 3300025284 Bacteria 15895
99 Ga0209130_1001712 3300025284 Bacteria 13224
100 Ga0209676_1000040 3300025292 Bacteria 438184
101 Ga0209676_1002458 3300025292 Bacteria 13102
102 Ga0209025_1046512 3300025294 Bacteria 1784
103 Ga0209025_1047069 3300025294 Bacteria 1766
104 Ga0209564_1000389 3300025295 Bacteria 79321
105 Ga0209564_1000862 3300025295 Bacteria 40422
106 Ga0209758_1021579 3300025297 Bacteria 2996
107 Ga0209758_1034860 3300025297 Bacteria 1994
108 Ga0209050_1000021 3300025298 Bacteria 574406
109 Ga0209050_1001833 3300025298 Bacteria 20672
110 Ga0209256_1004660 3300025299 Bacteria 8438
111 Ga0207426_1000079 3300025302 Bacteria 314709
112 Ga0209051_1000111 3300025303 Bacteria 153024
113 Ga0209051_1000376 3300025303 Bacteria 63531
114 Ga0209257_1000043 3300025304 Bacteria 512127
115 Ga0209257_1000215 3300025304 Bacteria 136521
116 Ga0207656_10019698 3300025321 Bacteria 2671
117 Ga0207656_10094640 3300025321 Bacteria 1361
118 Ga0207645_10030719 3300025907 Bacteria 3461
119 Ga0207705_10001392 3300025909 Bacteria 19279
120 Ga0207695_10012362 3300025913 Bacteria 10254
121 Ga0207695_10012429 3300025913 Bacteria 10223
122 Ga0207695_10020810 3300025913 Bacteria 7502
123 Ga0207695_10063351 3300025913 Bacteria 3813
124 Ga0207671_10001301 3300025914 Bacteria 29299
125 Ga0207671_10127367 3300025914 Bacteria 1952
126 Ga0207694_10155882 3300025924 Bacteria 1842
127 Ga0207650_10060492 3300025925 Bacteria 2826
128 Ga0207687_10125453 3300025927 Bacteria 1926
129 Ga0207644_10029585 3300025931 Bacteria 3801
130 Ga0207690_10014592 3300025932 Bacteria 4745
131 Ga0207706_10048485 3300025933 Bacteria 3756
132 Ga0207670_10050489 3300025936 Bacteria 2788
133 Ga0207711_10303271 3300025941 Bacteria 1473
134 Ga0207689_10257442 3300025942 Bacteria 1444
135 Ga0207667_10291494 3300025949 Bacteria 1667
136 Ga0207667_10336238 3300025949 Bacteria 1542
137 Ga0207677_10071213 3300026023 Bacteria 2453
138 Ga0207677_10520571 3300026023 Bacteria 1032
139 Ga0207674_10182362 3300026116 Bacteria 2051
140 Ga0207675_100413893 3300026118 Bacteria 1330
141 Ga0207698_10015383 3300026142 Bacteria 5121
142 Ga0207698_10087839 3300026142 Bacteria 2534
143 Ga0307517_10000854 3300028786 Bacteria 52115
144 Ga0307517_10052016 3300028786 Bacteria 4117
145 Ga0307515_10004221 3300028794 Bacteria 29886
146 Ga0265338_10000479 3300028800 Bacteria 71329
147 Ga0265338_10000909 3300028800 Bacteria 49863
148 Ga0307512_10139809 3300030522 Bacteria 1486
149 Ga0265328_10017632 3300031239 Bacteria 2763
150 Ga0265331_10001642 3300031250 Bacteria 16262
151 Ga0265327_10000012 3300031251 Bacteria 530403
152 Ga0307513_10011849 3300031456 Bacteria 10801
153 Ga0307508_10000388 3300031616 Bacteria 52836
154 Ga0307514_10011536 3300031649 Bacteria 7347
155 Ga0307516_10005065 3300031730 Bacteria 15946
156 Ga0307406_10172846 3300031901 Bacteria 1565
157 Ga0307412_10056466 3300031911 Bacteria 2616
158 Ga0307510_10075473 3300033180 Bacteria 3323
159 Ga0395900_0000385 3300037418 Bacteria 63693
160 Ga0395900_0006408 3300037418 Bacteria 12267
161 Ga0395898_0020787 3300037466 Bacteria 6663
162 Ga0395901_0007163 3300038443 Bacteria 11253
163 Ga0436361_0170834 3300039447 Bacteria 3204
164 Ga0451577_0095004 3300042876 Bacteria 2662
165 Ga0466969_0043334 3300044656 Bacteria 2243
166 Ga0466969_0067730 3300044656 Bacteria 1722
167 Ga0466965_0002333 3300044683 Bacteria 8022
168 Ga0466965_0038718 3300044683 Bacteria 2343
169 Ga0466965_0038941 3300044683 Bacteria 2335
170 Ga0466966_0000442 3300044684 Bacteria 26621
171 Ga0466966_0002770 3300044684 Bacteria 11521
172 Ga0466966_0033220 3300044684 Bacteria 3340
173 Ga0466961_0004810 3300044693 Bacteria 8497
174 Ga0466961_0026733 3300044693 Bacteria 3711
175 Ga0466963_0031990 3300044694 Bacteria 3403
176 Ga0466963_0056729 3300044694 Bacteria 2607
177 Ga0466964_0033909 3300044706 Bacteria 2035
178 Ga0466971_0002427 3300044719 Bacteria 7865
179 Ga0466971_0038186 3300044719 Bacteria 2154
180 Ga0466968_0097694 3300044735 Bacteria 1308
181 Ga0466957_0000094 3300044842 Bacteria 35631
182 Ga0466957_0008039 3300044842 Bacteria 5982
183 Ga0466957_0019597 3300044842 Bacteria 3980
184 Ga0466959_0046328 3300045049 Bacteria 3200
185 Ga0466959_0059218 3300045049 Bacteria 2789
186 Ga0466959_0211250 3300045049 Bacteria 1348
187 Ga0466958_0023996 3300045836 Bacteria 3585
188 Ga0466958_0031298 3300045836 Bacteria 3162
189 Ga0466958_0046223 3300045836 Bacteria 2627
190 Ga0466967_0298938 3300045976 Bacteria 1548
191 Ga0495603_0000255 3300046455 Bacteria 28014
192 Ga0495590_0000001 3300046457 Bacteria 762984
193 Ga0495591_014225 3300046458 Bacteria 2871
194 Ga0495629_0000160 3300046459 Bacteria 59328
195 Ga0495638_0000017 3300046460 Bacteria 391117
196 Ga0495638_0016088 3300046460 Bacteria 5013
197 Ga0495638_0137331 3300046460 Bacteria 1430
198 Ga0495650_0001089 3300046471 Bacteria 29820
199 Ga0495650_0001437 3300046471 Bacteria 23018
200 Ga0495650_0007145 3300046471 Bacteria 6776
201 Ga0495650_0022684 3300046471 Bacteria 3007
202 Ga0495580_0002513 3300046472 Bacteria 15996
203 Ga0495582_0013102 3300046473 Bacteria 4565
204 Ga0495639_0013299 3300046475 Bacteria 3553
205 Ga0495639_0059765 3300046475 Bacteria 1745
206 Ga0495664_0038485 3300046477 Bacteria 2823
207 Ga0495585_0030069 3300046492 Bacteria 3090
208 Ga0495607_0000656 3300046501 Bacteria 33590
209 Ga0495583_0000050 3300046506 Bacteria 213627
210 Ga0495583_0045786 3300046506 Bacteria 2021
211 Ga0495606_0000509 3300046507 Bacteria 63142
212 Ga0495606_0000588 3300046507 Bacteria 57713
213 Ga0495606_0015608 3300046507 Bacteria 5840
214 Ga0495608_0068768 3300046511 Bacteria 2315
215 Ga0495610_0013588 3300046512 Bacteria 4831
216 Ga0495616_0003518 3300046513 Bacteria 10019
217 Ga0495630_0441235 3300046517 Bacteria 997
218 Ga0495631_0000416 3300046518 Bacteria 29385
219 Ga0495643_0000044 3300046522 Bacteria 226211
220 Ga0495643_0063948 3300046522 Bacteria 1945
221 Ga0495648_0000001 3300046524 Bacteria 696872
222 Ga0495642_0001229 3300046528 Bacteria 11776
223 Ga0495642_0009528 3300046528 Bacteria 3716
224 Ga0495654_0010420 3300046530 Bacteria 5059
225 Ga0495598_0149146 3300046537 Bacteria 815
226 Ga0495621_0033283 3300046539 Bacteria 1776
227 Ga0495597_0000216 3300046542 Bacteria 52708
228 Ga0495645_0000466 3300046543 Bacteria 27957
229 Ga0495645_0013614 3300046543 Bacteria 5759
230 Ga0495622_0000067 3300046557 Bacteria 90774
231 Ga0495633_0000183 3300046558 Bacteria 81788
232 Ga0495656_0002350 3300046615 Bacteria 6264
233 Ga0495668_0000194 3300046616 Bacteria 89512
234 Ga0495668_0094455 3300046616 Bacteria 1637
235 Ga0495634_0084471 3300046642 Bacteria 2070
236 Ga0495625_0000035 3300046660 Bacteria 224323
237 Ga0495625_0011189 3300046660 Bacteria 7340
238 Ga0495625_0106266 3300046660 Bacteria 1922
239 Ga0495588_0134043 3300046674 Bacteria 1307
240 Ga0495646_0137794 3300046680 Bacteria 1367
241 Ga0495658_0023552 3300046683 Bacteria 3269
242 Ga0495669_0081531 3300046684 Bacteria 1485
243 Ga0495670_0082036 3300046691 Bacteria 1643
244 Ga0495649_0002788 3300046694 Bacteria 12166
245 Ga0495649_0015631 3300046694 Bacteria 4315
246 Ga0495589_0005918 3300046794 Bacteria 6457
247 Ga0495589_0011979 3300046794 Bacteria 4496
248 Ga0495589_0030158 3300046794 Bacteria 2732
249 Ga0495600_0021426 3300046809 Bacteria 4138
250 Ga0495581_0016790 3300047315 Bacteria 4255
251 Ga0495676_0035202 3300047321 Bacteria 4190
252 Ga0495687_000925 3300047443 Bacteria 30492
253 Ga0495687_001022 3300047443 Bacteria 27907
254 Ga0495687_015063 3300047443 Bacteria 3946
255 Ga0495593_0010489 3300047673 Bacteria 5348
256 Ga0495593_0021465 3300047673 Bacteria 3607
257 Ga0495614_0005159 3300048089 Bacteria 5895
258 Ga0495614_0031740 3300048089 Bacteria 2274
259 Ga0495615_0033579 3300048090 Bacteria 1243
260 Ga0496101_0004840 3300048904 Bacteria 8538
261 Ga0496104_0039978 3300048907 Bacteria 4394
262 Ga0496104_0148368 3300048907 Bacteria 2252
263 Ga0496105_0080784 3300048908 Bacteria 2686
264 Ga0496107_0111090 3300048910 Bacteria 2014
265 Ga0496110_0209496 3300048913 Bacteria 1772
266 Ga0496110_0358771 3300048913 Bacteria 1328
267 Ga0496114_0000816 3300048917 Bacteria 23339
268 Ga0496118_0045995 3300048921 Bacteria 3400
269 Ga0496119_0059216 3300048922 Bacteria 2302
270 Ga0496121_0000598 3300048924 Bacteria 67841
271 Ga0496124_0035012 3300048927 Bacteria 4397
272 Ga0496126_0000596 3300048929 Bacteria 68201
273 Ga0496126_0050001 3300048929 Bacteria 3813
274 Ga0495678_001523 3300049459 Bacteria 17976
275 Ga0495678_036885 3300049459 Bacteria 1991
276 nmdc:mga03683_2692_c1 3300050489 Bacteria 5570
277 nmdc:mga03n38_51914_c1 3300050490 Bacteria 1833
278 Ga0500651_0006262 3300053093 Bacteria 6847
279 Ga0500571_001059 3300053110 Bacteria 12243
280 Ga0500572_000074 3300053111 Bacteria 31840
281 Ga0500592_014729 3300053116 Bacteria 1253
282 Ga0500594_0000859 3300053118 Bacteria 6496
283 Ga0500608_035953 3300053122 Bacteria 2363
284 Ga0500655_000622 3300053133 Bacteria 7127
285 Ga0500658_0001194 3300053134 Bacteria 10572
286 Ga0500658_0001197 3300053134 Bacteria 10565
287 Ga0500559_0000780 3300053136 Bacteria 20835
288 Ga0500559_0002345 3300053136 Bacteria 9901
289 Ga0500564_014390 3300053138 Bacteria 3555
290 Ga0500568_0000849 3300053139 Bacteria 21493
291 Ga0500574_068483 3300053141 Bacteria 1038
292 Ga0500586_081887 3300053145 Bacteria 1133
293 Ga0500616_0005756 3300053153 Bacteria 8327
294 Ga0500619_000091 3300053154 Bacteria 24999
295 Ga0500622_0002454 3300053156 Bacteria 13372
296 Ga0500634_0017819 3300053161 Bacteria 3806
297 Ga0500636_0011417 3300053177 Bacteria 5201
298 Ga0500596_003820 3300053735 Bacteria 2820
299 Ga0500596_004286 3300053735 Bacteria 2633
300 Ga0500661_003805 3300055283 Bacteria 2834
301 Ga0466962_0089232 3300061719 Bacteria 1476
302 Ga0466962_0115464 3300061719 Bacteria 1293
303 2511251467 2511231003 Bacteria 5606035
304 2599627406 2599185214 Bacteria 8209958
305 2599677123 2599185226 Bacteria 8233575
306 2599685038 2599185227 Bacteria 8246414
307 2599696954 2599185229 Bacteria 8216126
308 2600814840 2600255067 Bacteria 6795583
309 2644163382 2643221628 Bacteria 5745828
310 2723878266 2721755763 Bacteria 4464185
311 2819599312 2818991446 Bacteria 7757362
312 2831271060 2831265667 Bacteria 7184833
313 2831867339 2831864461 Bacteria 6502356
314 2838059110 2838054893 Bacteria 7451788
315 2885200392 2885198086 Bacteria 7212419
316 2885214092 2885211737 Bacteria 7212420
317 2899930108 2899924645 Bacteria 7487985
318 2928043664 2928037797 Bacteria 7273642
319 2928049705 2928044640 Bacteria 7271509
320 2928054303 2928051484 Bacteria 7773759
321 2928069889 2928064002 Bacteria 7419480
322 2928074491 2928070936 Bacteria 8062541
323 2928090367 2928084124 Bacteria 7159212
324 8056118992 8056115690 Bacteria 5527654
325 Ga0373931_0003315
326 JGI25155J39150_1000159
327 JGI25156J39149_1005466
328 JGI25154J39366_1000244
329 JGI25154J39366_1000960
330 JGI25157J39369_1006409
331 JGI25152J39213_1016983
332 rootH2_10025652
333 rootL2_10007230
334 JGI25161J50226_1002916
335 Ga0006562J51391_1086896
336 Ga0055535_1000751
337 Ga0055542_1000013
338 Ga0055529_1000433
339 Ga0055529_1000701
340 Ga0055529_1000772
341 Ga0055526_1002903
342 Ga0055526_1010945
343 Ga0055524_1022592
344 Ga0055536_1004567
345 Ga0055536_1010129
346 Ga0055530_10004654
347 Ga0055530_10022457
348 Ga0055540_1003998
349 Ga0055540_1007811
350 Ga0055531_10006151
351 Ga0055531_10012614
352 Ga0055543_1004184
353 Ga0055543_1007703
354 Ga0065165_1000059
355 Ga0070658_10006150
356 Ga0070676_10004533
357 Ga0070670_100047100
358 Ga0068869_100010541
359 Ga0068869_100280246
360 Ga0068868_100287999
361 Ga0070660_100323925
362 Ga0070689_100186344
363 Ga0070675_100184472
364 Ga0070671_100053107
365 Ga0070659_100023300
366 Ga0070700_100422924
367 Ga0070685_10446395
368 Ga0070665_100172886
369 Ga0068855_100002626
370 Ga0068857_100133662
371 Ga0068852_100014403
372 Ga0068852_100383465
373 Ga0068851_10023794
374 Ga0097621_100054554
375 Ga0075370_10063850
376 Ga0068871_100194354
377 Ga0105244_10010828
378 Ga0105240_10009098
379 Ga0105240_10163749
380 Ga0105245_10030100
381 Ga0105243_10341202
382 Ga0105241_10254455
383 Ga0105237_10001612
384 Ga0105237_10007804
385 Ga0105237_10060265
386 Ga0105238_10300695
387 Ga0105239_10001663
388 Ga0105239_10007587
389 Ga0105246_10040457
390 Ga0157373_10039367
391 Ga0157371_10037352
392 Ga0157370_10002724
393 Ga0157370_10066449
394 Ga0157370_10392263
395 Ga0157369_10019724
396 Ga0157369_10025487
397 Ga0157374_10038447
398 Ga0157372_10036108
399 Ga0157372_10057751
400 Ga0157375_10027121
401 Ga0157375_10915289
402 Ga0163161_10001624
403 Ga0163161_10031063
404 Ga0206353_11757722
405 Ga0224712_10024464
406 Ga0209435_100107
407 Ga0209436_103343
408 Ga0209258_100020
409 Ga0209258_100189
410 Ga0209258_100554
411 Ga0209646_1000020
412 Ga0209646_1000106
413 Ga0209026_1001963
414 Ga0209148_1000031
415 Ga0209759_1000277
416 Ga0209759_1002030
417 Ga0209129_1010959
418 Ga0209565_1004312
419 Ga0209565_1004742
420 Ga0209455_1000092
421 Ga0209673_1001328
422 Ga0209130_1001428
423 Ga0209130_1001712
424 Ga0209676_1000040
425 Ga0209676_1002458
426 Ga0209025_1046512
427 Ga0209025_1047069
428 Ga0209564_1000389
429 Ga0209564_1000862
430 Ga0209758_1021579
431 Ga0209758_1034860
432 Ga0209050_1000021
433 Ga0209050_1001833
434 Ga0209256_1004660
435 Ga0207426_1000079
436 Ga0209051_1000111
437 Ga0209051_1000376
438 Ga0209257_1000043
439 Ga0209257_1000215
440 Ga0207656_10019698
441 Ga0207656_10094640
442 Ga0207645_10030719
443 Ga0207705_10001392
444 Ga0207695_10012362
445 Ga0207695_10012429
446 Ga0207695_10020810
447 Ga0207695_10063351
448 Ga0207671_10001301
449 Ga0207671_10127367
450 Ga0207694_10155882
451 Ga0207650_10060492
452 Ga0207687_10125453
453 Ga0207644_10029585
454 Ga0207690_10014592
455 Ga0207706_10048485
456 Ga0207670_10050489
457 Ga0207711_10303271
458 Ga0207689_10257442
459 Ga0207667_10291494
460 Ga0207667_10336238
461 Ga0207677_10071213
462 Ga0207677_10520571
463 Ga0207674_10182362
464 Ga0207675_100413893
465 Ga0207698_10015383
466 Ga0207698_10087839
467 Ga0307517_10000854
468 Ga0307517_10052016
469 Ga0307515_10004221
470 Ga0265338_10000479
471 Ga0265338_10000909
472 Ga0307512_10139809
473 Ga0265328_10017632
474 Ga0265331_10001642
475 Ga0265327_10000012
476 Ga0307513_10011849
477 Ga0307508_10000388
478 Ga0307514_10011536
479 Ga0307516_10005065
480 Ga0307406_10172846
481 Ga0307412_10056466
482 Ga0307510_10075473
483 Ga0395900_0000385
484 Ga0395900_0006408
485 Ga0395898_0020787
486 Ga0395901_0007163
487 Ga0436361_0170834
488 Ga0451577_0095004
489 Ga0466969_0043334
490 Ga0466969_0067730
491 Ga0466965_0002333
492 Ga0466965_0038718
493 Ga0466965_0038941
494 Ga0466966_0000442
495 Ga0466966_0002770
496 Ga0466966_0033220
497 Ga0466961_0004810
498 Ga0466961_0026733
499 Ga0466963_0031990
500 Ga0466963_0056729
501 Ga0466964_0033909
502 Ga0466971_0002427
503 Ga0466971_0038186
504 Ga0466968_0097694
505 Ga0466957_0000094
506 Ga0466957_0008039
507 Ga0466957_0019597
508 Ga0466959_0046328
509 Ga0466959_0059218
510 Ga0466959_0211250
511 Ga0466958_0023996
512 Ga0466958_0031298
513 Ga0466958_0046223
514 Ga0466967_0298938
515 Ga0495603_0000255
516 Ga0495590_0000001
517 Ga0495591_014225
518 Ga0495629_0000160
519 Ga0495638_0000017
520 Ga0495638_0016088
521 Ga0495638_0137331
522 Ga0495650_0001089
523 Ga0495650_0001437
524 Ga0495650_0007145
525 Ga0495650_0022684
526 Ga0495580_0002513
527 Ga0495582_0013102
528 Ga0495639_0013299
529 Ga0495639_0059765
530 Ga0495664_0038485
531 Ga0495585_0030069
532 Ga0495607_0000656
533 Ga0495583_0000050
534 Ga0495583_0045786
535 Ga0495606_0000509
536 Ga0495606_0000588
537 Ga0495606_0015608
538 Ga0495608_0068768
539 Ga0495610_0013588
540 Ga0495616_0003518
541 Ga0495630_0441235
542 Ga0495631_0000416
543 Ga0495643_0000044
544 Ga0495643_0063948
545 Ga0495648_0000001
546 Ga0495642_0001229
547 Ga0495642_0009528
548 Ga0495654_0010420
549 Ga0495598_0149146
550 Ga0495621_0033283
551 Ga0495597_0000216
552 Ga0495645_0000466
553 Ga0495645_0013614
554 Ga0495622_0000067
555 Ga0495633_0000183
556 Ga0495656_0002350
557 Ga0495668_0000194
558 Ga0495668_0094455
559 Ga0495634_0084471
560 Ga0495625_0000035
561 Ga0495625_0011189
562 Ga0495625_0106266
563 Ga0495588_0134043
564 Ga0495646_0137794
565 Ga0495658_0023552
566 Ga0495669_0081531
567 Ga0495670_0082036
568 Ga0495649_0002788
569 Ga0495649_0015631
570 Ga0495589_0005918
571 Ga0495589_0011979
572 Ga0495589_0030158
573 Ga0495600_0021426
574 Ga0495581_0016790
575 Ga0495676_0035202
576 Ga0495687_000925
577 Ga0495687_001022
578 Ga0495687_015063
579 Ga0495593_0010489
580 Ga0495593_0021465
581 Ga0495614_0005159
582 Ga0495614_0031740
583 Ga0495615_0033579
584 Ga0496101_0004840
585 Ga0496104_0039978
586 Ga0496104_0148368
587 Ga0496105_0080784
588 Ga0496107_0111090
589 Ga0496110_0209496
590 Ga0496110_0358771
591 Ga0496114_0000816
592 Ga0496118_0045995
593 Ga0496119_0059216
594 Ga0496121_0000598
595 Ga0496124_0035012
596 Ga0496126_0000596
597 Ga0496126_0050001
598 Ga0495678_001523
599 Ga0495678_036885
600 nmdc:mga03683_2692_c1
601 nmdc:mga03n38_51914_c1
602 Ga0500651_0006262
603 Ga0500571_001059
604 Ga0500572_000074
605 Ga0500592_014729
606 Ga0500594_0000859
607 Ga0500608_035953
608 Ga0500655_000622
609 Ga0500658_0001194
610 Ga0500658_0001197
611 Ga0500559_0000780
612 Ga0500559_0002345
613 Ga0500564_014390
614 Ga0500568_0000849
615 Ga0500574_068483
616 Ga0500586_081887
617 Ga0500616_0005756
618 Ga0500619_000091
619 Ga0500622_0002454
620 Ga0500634_0017819
621 Ga0500636_0011417
622 Ga0500596_003820
623 Ga0500596_004286
624 Ga0500661_003805
625 Ga0466962_0089232
626 Ga0466962_0115464
627 2511251467
628 2599627406
629 2599677123
630 2599685038
631 2599696954
632 2600814840
633 2644163382
634 2723878266
635 2819599312
636 2831271060
637 2831867339
638 2838059110
639 2885200392
640 2885214092
641 2899930108
642 2928043664
643 2928049705
644 2928054303
645 2928069889
646 2928074491
647 2928090367
648 8056118992

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04909

Amidohydro_2

Amidohydrolase

54

317

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4i6k-assembly1.cif.gz_A crystal structure of probable 2-pyrone-4,6-dicarboxylic acid hydrolase abaye1769 (target efi-505029) from acinetobacter baumannii with citric acid bound 0.9644 15 279
4i6k-assembly1.cif.gz_A crystal structure of probable 2-pyrone-4,6-dicarboxylic acid hydrolase abaye1769 (target efi-505029) from acinetobacter baumannii with citric acid bound 0.9539 15 279
2ffi-assembly2.cif.gz_B crystal structure of putative 2-pyrone-4,6-dicarboxylic acid hydrolase from pseudomonas putida, northeast structural genomics target ppr23. 0.9284 13 280
2ffi-assembly2.cif.gz_B crystal structure of putative 2-pyrone-4,6-dicarboxylic acid hydrolase from pseudomonas putida, northeast structural genomics target ppr23. 0.9088 13 280
4dia-assembly1.cif.gz_A crystal structure of the d248n mutant of 2-pyrone-4,6-dicarboxylic acid hydrolase from sphingomonas paucimobilis complexed with substrate at ph 4.6 0.8493 15 278
ID Description Score Start End Superfamily
4i6kA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9644 15 279 3.20.20.140
4i6kA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9539 15 279 3.20.20.140
2ffiA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9184 13 280 3.20.20.140
2ffiA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.902 13 280 3.20.20.140
4mupC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8418 15 280 3.20.20.140
ID Description Score Start End GO Terms
AF-H0TU04-F1-model_v4 Amidohydrolase-related domain-containing protein 0.9896 14 279 GO:0016787
AF-A0A4Q5WCY1-F1-model_v4 deleted 0.9894 135 280
AF-X0X9Y5-F1-model_v4 Amidohydrolase-related domain-containing protein 0.9881 58 279 GO:0016787
AF-A0A6L6IHW7-F1-model_v4 Amidohydrolase family protein 0.9837 14 277 GO:0016787
AF-X0X9Y5-F1-model_v4 Amidohydrolase-related domain-containing protein 0.9837 58 279 GO:0016787

Map