F406214

General Info

Members Datasets Scaffolds Average Seq Length
321 226 642 394

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2517572101|2517764541
Length 463
Sequence PARHTASARAEIRRRAGLIAACPECPGQLPAPVTLADMRSWPACPLPTLPGRGQRPRLFDTSAGRLEPVGPELPAAEGPAGPSVSLYVCGITPYDATHLGHAFTYVTYDLLNRALRDAGYRVRFVENVTDVDDPLLERAARDGLDWTDVAERETDLFRADMAALRVLPPDHYVGVVEAIPLIVEMAAELVSAGATYALDGDVYFSVAAAPRFGYVSGLDAAAMRALSAERGGDPDRRGKKDPLDPLLWRAERPGEPSWPSPFGPGRPGWHIECAAIARRYLGDVIDVQGGGGDLVFPHHECSSAHAEVATGHNPFARRYVHTGMVGLDGHKMSKSRGNLEFVSRLRGRGVAPAAIRLALLAHSHRDDWEWTPAELAAAESRLGRWRAAVARPAGPDAGRLLADVRAAVATDLDTPTALAAVDRWATTALDGADDADTAAPGMTRLLVDALLGVDLGKVDTNGS

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
52 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
53 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
54 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
67 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
74 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
77 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
78 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
79 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
83 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
84 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
140 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
144 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
145 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
146 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
147 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
148 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
149 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
150 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
151 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
152 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
153 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
154 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
155 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
156 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
157 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
158 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
159 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
160 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
161 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
162 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
163 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
164 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
165 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
166 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
167 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
168 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
169 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
170 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
171 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
172 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
173 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
174 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
175 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
176 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
177 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
178 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
179 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
180 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
181 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
182 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
183 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
184 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
185 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
186 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
187 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
188 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
189 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
190 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
191 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
192 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
193 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
194 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
195 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
196 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
198 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
199 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
200 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
201 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
202 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
203 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
204 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
205 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
206 2517572101 Frankia sp. DC12 Isolate Nodule
207 2508501039 Frankia saprophytica CN3 Isolate Nodule
208 2558860280 Kutzneria sp. 744 Isolate Unclassified
209 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
210 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
211 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
212 2671180195 Frankia sp. CcI49 Isolate Nodule
213 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
214 2687453737 Frankia sp. BMG5.36 Isolate Nodule
215 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
216 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
217 2773857922 Frankia sp. CcI49 Isolate Nodule
218 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
219 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
220 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
221 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
222 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
223 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
224 8002775197 Frankia nepalensis CN7 Isolate Nodule
225 8002784119 Frankia sp. AgB1.9 Isolate Nodule
226 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.15
Metatranscriptomes 0.31
Isolates 6.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 3.12
Rhizoplane 5.92
Rhizosphere 84.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10004444 3300003373 Bacteria 3409
2 Ga0070658_10000882 3300005327 Bacteria 25672
3 Ga0070658_10248643 3300005327 Bacteria 1508
4 Ga0070670_100035669 3300005331 Bacteria 4281
5 Ga0068869_100003468 3300005334 Bacteria 9645
6 Ga0068869_100021696 3300005334 Bacteria 4419
7 Ga0070666_10027173 3300005335 Bacteria 3746
8 Ga0070680_100003317 3300005336 Bacteria 12015
9 Ga0068868_100036386 3300005338 Bacteria 3810
10 Ga0070660_100028983 3300005339 Bacteria 4146
11 Ga0070689_100134354 3300005340 Bacteria 1986
12 Ga0070687_100003739 3300005343 Bacteria 5961
13 Ga0070661_100050725 3300005344 Bacteria 3036
14 Ga0070668_100004311 3300005347 Bacteria 10556
15 Ga0070668_100012087 3300005347 Bacteria 6431
16 Ga0070669_100035791 3300005353 Bacteria 3597
17 Ga0070669_100082055 3300005353 Bacteria 2403
18 Ga0070675_100007243 3300005354 Bacteria 8556
19 Ga0070671_100041484 3300005355 Bacteria 3825
20 Ga0070674_100141495 3300005356 Bacteria 1806
21 Ga0070659_100061236 3300005366 Bacteria 2974
22 Ga0070667_100039328 3300005367 Bacteria 3964
23 Ga0070709_10082420 3300005434 Bacteria 2101
24 Ga0070714_100105218 3300005435 Bacteria 2491
25 Ga0070713_100001580 3300005436 Bacteria 14577
26 Ga0070713_100082944 3300005436 Bacteria 2739
27 Ga0070701_10050229 3300005438 Bacteria 2159
28 Ga0070711_100008233 3300005439 Bacteria 6378
29 Ga0070700_100000124 3300005441 Bacteria 47077
30 Ga0070694_100041405 3300005444 Bacteria 3073
31 Ga0070663_100014932 3300005455 Bacteria 4995
32 Ga0070678_100008267 3300005456 Bacteria 6225
33 Ga0070662_100034241 3300005457 Bacteria 3581
34 Ga0070681_10017833 3300005458 Bacteria 7094
35 Ga0070685_10019530 3300005466 Bacteria 3657
36 Ga0068853_100014490 3300005539 Bacteria 6458
37 Ga0068853_100046172 3300005539 Bacteria 3734
38 Ga0070686_100044107 3300005544 Bacteria 2801
39 Ga0070695_100011401 3300005545 Bacteria 5316
40 Ga0070696_100023865 3300005546 Bacteria 4156
41 Ga0070693_100001233 3300005547 Bacteria 11560
42 Ga0070693_100011522 3300005547 Bacteria 4454
43 Ga0070665_100010029 3300005548 Bacteria 9582
44 Ga0070665_100126714 3300005548 Bacteria 2556
45 Ga0068855_100008187 3300005563 Bacteria 12635
46 Ga0068855_100032936 3300005563 Bacteria 6186
47 Ga0068855_100159387 3300005563 Bacteria 2562
48 Ga0068854_100044390 3300005578 Bacteria 3154
49 Ga0068856_100025424 3300005614 Bacteria 5775
50 Ga0068856_100031621 3300005614 Bacteria 5179
51 Ga0070702_100001237 3300005615 Bacteria 10344
52 Ga0070702_100022078 3300005615 Bacteria 3359
53 Ga0068852_100082909 3300005616 Bacteria 2850
54 Ga0068859_100000325 3300005617 Bacteria 47431
55 Ga0068859_100009679 3300005617 Bacteria 9729
56 Ga0068859_100014585 3300005617 Bacteria 7894
57 Ga0068859_100015740 3300005617 Bacteria 7600
58 Ga0068864_100013783 3300005618 Bacteria 6703
59 Ga0068864_100029537 3300005618 Bacteria 4645
60 Ga0068866_10071620 3300005718 Bacteria 1834
61 Ga0068861_100006531 3300005719 Bacteria 7955
62 Ga0068870_10000306 3300005840 Bacteria 18174
63 Ga0068863_100000747 3300005841 Bacteria 32512
64 Ga0068863_100005701 3300005841 Bacteria 12225
65 Ga0068863_100009642 3300005841 Bacteria 9420
66 Ga0068858_100104681 3300005842 Bacteria 2640
67 Ga0068860_100000035 3300005843 Bacteria 238993
68 Ga0068860_100058208 3300005843 Bacteria 3673
69 Ga0068860_100122270 3300005843 Bacteria 2493
70 Ga0068862_100000106 3300005844 Bacteria 99778
71 Ga0081455_10007494 3300005937 Bacteria 11480
72 Ga0081538_10000888 3300005981 Bacteria 32356
73 Ga0075432_10000313 3300006058 Bacteria 13666
74 Ga0070716_100003175 3300006173 Bacteria 7698
75 Ga0070712_100057803 3300006175 Bacteria 2726
76 Ga0097621_100048951 3300006237 Bacteria 3432
77 Ga0097621_100113235 3300006237 Bacteria 2295
78 Ga0075433_10005401 3300006852 Bacteria 10042
79 Ga0075433_10028934 3300006852 Bacteria 4715
80 Ga0075434_100006254 3300006871 Bacteria 10904
81 Ga0068865_100045181 3300006881 Bacteria 3019
82 Ga0075436_100001329 3300006914 Bacteria 16805
83 Ga0075436_100007452 3300006914 Bacteria 7484
84 Ga0097620_100000325 3300006931 Bacteria 47431
85 Ga0097620_100009678 3300006931 Bacteria 9729
86 Ga0097620_100014585 3300006931 Bacteria 7894
87 Ga0097620_100015740 3300006931 Bacteria 7600
88 Ga0075435_100003339 3300007076 Bacteria 10886
89 Ga0075435_100008439 3300007076 Bacteria 7391
90 Ga0105251_10045239 3300009011 Bacteria 2123
91 Ga0105240_10075630 3300009093 Bacteria 4153
92 Ga0105240_10104309 3300009093 Bacteria 3443
93 Ga0111539_10000158 3300009094 Bacteria 76916
94 Ga0111539_10030229 3300009094 Bacteria 6587
95 Ga0111539_10056582 3300009094 Bacteria 4661
96 Ga0105245_10004893 3300009098 Bacteria 11783
97 Ga0105247_10008676 3300009101 Bacteria 6195
98 Ga0105247_10013984 3300009101 Bacteria 4813
99 Ga0105247_10118532 3300009101 Bacteria 1712
100 Ga0105243_10225447 3300009148 Bacteria 1659
101 Ga0105241_10005417 3300009174 Bacteria 9433
102 Ga0105241_10008629 3300009174 Bacteria 7490
103 Ga0105241_10059888 3300009174 Bacteria 2929
104 Ga0105242_10027643 3300009176 Bacteria 4508
105 Ga0105248_10000018 3300009177 Bacteria 294894
106 Ga0105248_10014436 3300009177 Bacteria 8694
107 Ga0105237_10066382 3300009545 Bacteria 3603
108 Ga0105237_10113448 3300009545 Bacteria 2702
109 Ga0105238_10114015 3300009551 Bacteria 2682
110 Ga0105249_10003464 3300009553 Bacteria 13664
111 Ga0105239_10032722 3300010375 Bacteria 5713
112 Ga0105246_10006340 3300011119 Bacteria 7222
113 Ga0157370_10012239 3300013104 Bacteria 8910
114 Ga0157370_10028835 3300013104 Bacteria 5456
115 Ga0157369_10003260 3300013105 Bacteria 19322
116 Ga0157369_10020486 3300013105 Bacteria 7393
117 Ga0157374_10102852 3300013296 Bacteria 2740
118 Ga0163162_10298309 3300013306 Bacteria 1743
119 Ga0157375_10048112 3300013308 Bacteria 4169
120 Ga0163163_10002431 3300014325 Bacteria 15754
121 Ga0163163_10038252 3300014325 Bacteria 4675
122 Ga0157377_10041251 3300014745 Bacteria 2560
123 Ga0157379_10006815 3300014968 Bacteria 9873
124 Ga0163161_10010375 3300017792 Bacteria 6450
125 Ga0206356_10229726 3300020070 Bacteria 2312
126 Ga0207713_1058894 3300025735 Bacteria 1477
127 Ga0207710_10007118 3300025900 Bacteria 4746
128 Ga0207710_10008091 3300025900 Bacteria 4440
129 Ga0207688_10000570 3300025901 Bacteria 18094
130 Ga0207688_10098610 3300025901 Bacteria 1685
131 Ga0207680_10050991 3300025903 Bacteria 2473
132 Ga0207647_10089015 3300025904 Bacteria 1843
133 Ga0207645_10008746 3300025907 Bacteria 7048
134 Ga0207643_10000323 3300025908 Bacteria 32834
135 Ga0207705_10014438 3300025909 Bacteria 5685
136 Ga0207654_10077220 3300025911 Bacteria 1996
137 Ga0207707_10047190 3300025912 Bacteria 3751
138 Ga0207671_10121552 3300025914 Bacteria 1996
139 Ga0207693_10002123 3300025915 Bacteria 17306
140 Ga0207663_10000898 3300025916 Bacteria 13561
141 Ga0207660_10008880 3300025917 Bacteria 6497
142 Ga0207662_10028243 3300025918 Bacteria 3242
143 Ga0207657_10039846 3300025919 Bacteria 4169
144 Ga0207657_10059139 3300025919 Bacteria 3295
145 Ga0207649_10042909 3300025920 Bacteria 2762
146 Ga0207652_10117094 3300025921 Bacteria 2367
147 Ga0207694_10256715 3300025924 Bacteria 1431
148 Ga0207650_10005310 3300025925 Bacteria 8787
149 Ga0207659_10022958 3300025926 Bacteria 4160
150 Ga0207687_10112319 3300025927 Bacteria 2025
151 Ga0207644_10007263 3300025931 Bacteria 7211
152 Ga0207644_10027637 3300025931 Bacteria 3921
153 Ga0207690_10106648 3300025932 Bacteria 2011
154 Ga0207706_10007205 3300025933 Bacteria 10282
155 Ga0207706_10067964 3300025933 Bacteria 3136
156 Ga0207686_10026173 3300025934 Bacteria 3401
157 Ga0207670_10078700 3300025936 Bacteria 2300
158 Ga0207669_10157033 3300025937 Bacteria 1601
159 Ga0207665_10002367 3300025939 Bacteria 12738
160 Ga0207691_10063246 3300025940 Bacteria 3357
161 Ga0207711_10000240 3300025941 Bacteria 58554
162 Ga0207711_10044937 3300025941 Bacteria 3773
163 Ga0207689_10001582 3300025942 Bacteria 21570
164 Ga0207689_10008478 3300025942 Bacteria 8956
165 Ga0207661_10065067 3300025944 Bacteria 2959
166 Ga0207679_10004470 3300025945 Bacteria 8716
167 Ga0207667_10007161 3300025949 Bacteria 13464
168 Ga0207667_10008331 3300025949 Bacteria 12330
169 Ga0207651_10028522 3300025960 Bacteria 3523
170 Ga0207712_10054601 3300025961 Bacteria 2806
171 Ga0207668_10014393 3300025972 Bacteria 4895
172 Ga0207668_10026535 3300025972 Bacteria 3762
173 Ga0207640_10055533 3300025981 Bacteria 2594
174 Ga0207658_10026717 3300025986 Bacteria 4049
175 Ga0207677_10021357 3300026023 Bacteria 3953
176 Ga0207703_10011156 3300026035 Bacteria 6993
177 Ga0207703_10051326 3300026035 Bacteria 3341
178 Ga0207639_10080536 3300026041 Bacteria 2576
179 Ga0207678_10006136 3300026067 Bacteria 10694
180 Ga0207678_10073844 3300026067 Bacteria 2923
181 Ga0207708_10000023 3300026075 Bacteria 176615
182 Ga0207708_10037287 3300026075 Bacteria 3703
183 Ga0207702_10012202 3300026078 Bacteria 7151
184 Ga0207702_10034170 3300026078 Bacteria 4250
185 Ga0207641_10002936 3300026088 Bacteria 15416
186 Ga0207641_10023439 3300026088 Bacteria 5085
187 Ga0207676_10004806 3300026095 Bacteria 9584
188 Ga0207674_10079233 3300026116 Bacteria 3290
189 Ga0207674_10132605 3300026116 Bacteria 2454
190 Ga0207675_100005797 3300026118 Bacteria 11808
191 Ga0207675_100102895 3300026118 Bacteria 2691
192 Ga0207683_10007063 3300026121 Bacteria 9631
193 Ga0207683_10049319 3300026121 Bacteria 3686
194 Ga0207698_10013340 3300026142 Bacteria 5417
195 Ga0207698_10017633 3300026142 Bacteria 4851
196 Ga0207698_10101555 3300026142 Bacteria 2385
197 Ga0207428_10000715 3300027907 Bacteria 38285
198 Ga0207428_10010981 3300027907 Bacteria 8054
199 Ga0268266_10001214 3300028379 Bacteria 31731
200 Ga0268266_10073252 3300028379 Bacteria 2972
201 Ga0268265_10000008 3300028380 Bacteria 417328
202 Ga0268265_10041515 3300028380 Bacteria 3406
203 Ga0268264_10000031 3300028381 Bacteria 409525
204 Ga0307513_10000049 3300031456 Bacteria 153747
205 Ga0307513_10024195 3300031456 Bacteria 7070
206 Ga0307513_10061198 3300031456 Bacteria 3987
207 Ga0307509_10242045 3300031507 Bacteria 1596
208 Ga0307408_100005832 3300031548 Bacteria 8193
209 Ga0307405_10001336 3300031731 Bacteria 10336
210 Ga0307405_10009011 3300031731 Bacteria 5096
211 Ga0307413_10017089 3300031824 Bacteria 3770
212 Ga0307410_10006847 3300031852 Bacteria 6190
213 Ga0307410_10012041 3300031852 Bacteria 4978
214 Ga0307406_10000083 3300031901 Bacteria 52941
215 Ga0307406_10002544 3300031901 Bacteria 9946
216 Ga0307407_10004180 3300031903 Bacteria 6085
217 Ga0307412_10027524 3300031911 Bacteria 3546
218 Ga0307409_100000054 3300031995 Bacteria 40959
219 Ga0307409_100000288 3300031995 Bacteria 20426
220 Ga0307416_100000105 3300032002 Bacteria 51970
221 Ga0307416_100006421 3300032002 Bacteria 7361
222 Ga0307416_100017572 3300032002 Bacteria 5009
223 Ga0307416_100055683 3300032002 Bacteria 3187
224 Ga0307414_10011446 3300032004 Bacteria 5203
225 Ga0307415_100000174 3300032126 Bacteria 28683
226 Ga0373938_0022807 3300034957 Bacteria 1282
227 Ga0373949_0006138 3300035090 Bacteria 2657
228 Ga0373939_0000981 3300035114 Bacteria 7086
229 Ga0373960_0014249 3300035121 Bacteria 2010
230 Ga0439436_0002751 3300041404 Bacteria 5316
231 Ga0439438_018833 3300041405 Bacteria 1960
232 Ga0439457_001394 3300042014 Bacteria 7275
233 Ga0439463_005912 3300042016 Bacteria 3038
234 Ga0439463_012199 3300042016 Bacteria 2111
235 Ga0439463_028210 3300042016 Bacteria 1414
236 Ga0439458_0007019 3300042157 Bacteria 2510
237 Ga0439435_0007409 3300042436 Bacteria 2510
238 Ga0439459_0017293 3300042438 Bacteria 1342
239 Ga0439440_0004786 3300042993 Bacteria 2670
240 Ga0466965_0046146 3300044683 Bacteria 2156
241 Ga0466961_0074011 3300044693 Bacteria 2160
242 Ga0466961_0087250 3300044693 Bacteria 1972
243 Ga0466963_0000452 3300044694 Bacteria 19018
244 Ga0466963_0018924 3300044694 Bacteria 4312
245 Ga0466964_0007534 3300044706 Bacteria 4073
246 Ga0466971_0015428 3300044719 Bacteria 3363
247 Ga0466957_0003278 3300044842 Bacteria 8865
248 Ga0466957_0023515 3300044842 Bacteria 3643
249 Ga0466960_0013048 3300044901 Bacteria 3521
250 Ga0466960_0088445 3300044901 Bacteria 1575
251 Ga0466958_0030798 3300045836 Bacteria 3188
252 Ga0466967_0003089 3300045976 Bacteria 10706
253 Ga0466967_0004109 3300045976 Bacteria 9725
254 Ga0466967_0101513 3300045976 Bacteria 2630
255 Ga0466967_0156063 3300045976 Bacteria 2138
256 Ga0466967_0192314 3300045976 Bacteria 1929
257 Ga0495648_0051893 3300046524 Bacteria 2495
258 Ga0495661_0064242 3300046665 Bacteria 2167
259 Ga0496102_0000891 3300048905 Bacteria 28311
260 Ga0496102_0045803 3300048905 Bacteria 3971
261 Ga0496103_0000084 3300048906 Bacteria 105728
262 Ga0496104_0035579 3300048907 Bacteria 4649
263 Ga0496105_0002352 3300048908 Bacteria 13705
264 Ga0496106_0028334 3300048909 Bacteria 4172
265 Ga0496106_0032469 3300048909 Bacteria 3892
266 Ga0496107_0115036 3300048910 Bacteria 1979
267 Ga0496108_0011996 3300048911 Bacteria 7050
268 Ga0496108_0078363 3300048911 Bacteria 2796
269 Ga0496109_0026361 3300048912 Bacteria 5182
270 Ga0496109_0026454 3300048912 Bacteria 5174
271 Ga0496110_0028671 3300048913 Bacteria 4783
272 Ga0496110_0046474 3300048913 Bacteria 3798
273 Ga0496111_0015784 3300048914 Bacteria 5194
274 Ga0496111_0024608 3300048914 Bacteria 4242
275 Ga0496114_0035365 3300048917 Bacteria 4124
276 Ga0496115_0014193 3300048918 Bacteria 6027
277 Ga0496115_0021711 3300048918 Bacteria 4963
278 Ga0496116_0000474 3300048919 Bacteria 55522
279 Ga0496117_0046717 3300048920 Bacteria 3112
280 Ga0496118_0002773 3300048921 Bacteria 22948
281 Ga0496118_0026914 3300048921 Bacteria 4883
282 Ga0496118_0100022 3300048921 Bacteria 1963
283 Ga0496119_0000067 3300048922 Bacteria 162404
284 Ga0496119_0015302 3300048922 Bacteria 5919
285 Ga0496126_0000006 3300048929 Bacteria 798804
286 Ga0501035_0087491 3300049822 Bacteria 2746
287 Ga0501045_0231397 3300049824 Bacteria 1376
288 nmdc:mga09592_107037_c1 3300050508 Bacteria 2398
289 nmdc:mga08y16_16288_c1 3300050511 Bacteria 7817
290 nmdc:mga0n895_6934_c1 3300050512 Bacteria 9679
291 nmdc:mga0rr50_2900_c1 3300050513 Bacteria 9780
292 nmdc:mga0rr50_3637_c2 3300050513 Bacteria 8269
293 nmdc:mga0rr50_76423_c1 3300050513 Bacteria 2571
294 nmdc:mga08x19_12259_c1 3300050514 Bacteria 5161
295 nmdc:mga08x19_1920_c1 3300050514 Bacteria 8342
296 nmdc:mga0a205_12884_c1 3300050515 Bacteria 7756
297 nmdc:mga0a205_14134_c1 3300050515 Bacteria 7449
298 Ga0500583_0018083 3300053092 Bacteria 2857
299 Ga0466962_0027087 3300061719 Bacteria 2752
300 Ga0466962_0056394 3300061719 Bacteria 1876
301 2517764541 2517572101 Bacteria 6884336
302 2508674167 2508501039 Bacteria 9978592
303 2559431152 2558860280 Bacteria 11429938
304 2644504175 2643221690 Bacteria 4654705
305 2644526747 2643221694 Bacteria 4392972
306 2644670513 2643221722 Bacteria 4247614
307 2671837066 2671180195 Bacteria 9757215
308 2676198761 2675902999 Bacteria 9438463
309 2689960048 2687453737 Bacteria 11203906
310 2689991958 2687453743 Bacteria 8361025
311 2774843339 2773857921 Bacteria 9435764
312 2774855222 2773857922 Bacteria 9757215
313 2791911405 2791354901 Bacteria 8322202
314 2866556745 2866552031 Bacteria 5824618
315 2883825281 2883821847 Bacteria 5121194
316 2887443949 2887443736 Bacteria 4426037
317 2895890060 2895880812 Bacteria 11255272
318 3003009261 3002998708 Bacteria 11715108
319 8002776893 8002775197 Bacteria 10728764
320 8002785261 8002784119 Bacteria 9788632
321 8056059202 8056054917 Bacteria 5736694
322 JGI25407J50210_10004444
323 Ga0070658_10000882
324 Ga0070658_10248643
325 Ga0070670_100035669
326 Ga0068869_100003468
327 Ga0068869_100021696
328 Ga0070666_10027173
329 Ga0070680_100003317
330 Ga0068868_100036386
331 Ga0070660_100028983
332 Ga0070689_100134354
333 Ga0070687_100003739
334 Ga0070661_100050725
335 Ga0070668_100004311
336 Ga0070668_100012087
337 Ga0070669_100035791
338 Ga0070669_100082055
339 Ga0070675_100007243
340 Ga0070671_100041484
341 Ga0070674_100141495
342 Ga0070659_100061236
343 Ga0070667_100039328
344 Ga0070709_10082420
345 Ga0070714_100105218
346 Ga0070713_100001580
347 Ga0070713_100082944
348 Ga0070701_10050229
349 Ga0070711_100008233
350 Ga0070700_100000124
351 Ga0070694_100041405
352 Ga0070663_100014932
353 Ga0070678_100008267
354 Ga0070662_100034241
355 Ga0070681_10017833
356 Ga0070685_10019530
357 Ga0068853_100014490
358 Ga0068853_100046172
359 Ga0070686_100044107
360 Ga0070695_100011401
361 Ga0070696_100023865
362 Ga0070693_100001233
363 Ga0070693_100011522
364 Ga0070665_100010029
365 Ga0070665_100126714
366 Ga0068855_100008187
367 Ga0068855_100032936
368 Ga0068855_100159387
369 Ga0068854_100044390
370 Ga0068856_100025424
371 Ga0068856_100031621
372 Ga0070702_100001237
373 Ga0070702_100022078
374 Ga0068852_100082909
375 Ga0068859_100000325
376 Ga0068859_100009679
377 Ga0068859_100014585
378 Ga0068859_100015740
379 Ga0068864_100013783
380 Ga0068864_100029537
381 Ga0068866_10071620
382 Ga0068861_100006531
383 Ga0068870_10000306
384 Ga0068863_100000747
385 Ga0068863_100005701
386 Ga0068863_100009642
387 Ga0068858_100104681
388 Ga0068860_100000035
389 Ga0068860_100058208
390 Ga0068860_100122270
391 Ga0068862_100000106
392 Ga0081455_10007494
393 Ga0081538_10000888
394 Ga0075432_10000313
395 Ga0070716_100003175
396 Ga0070712_100057803
397 Ga0097621_100048951
398 Ga0097621_100113235
399 Ga0075433_10005401
400 Ga0075433_10028934
401 Ga0075434_100006254
402 Ga0068865_100045181
403 Ga0075436_100001329
404 Ga0075436_100007452
405 Ga0097620_100000325
406 Ga0097620_100009678
407 Ga0097620_100014585
408 Ga0097620_100015740
409 Ga0075435_100003339
410 Ga0075435_100008439
411 Ga0105251_10045239
412 Ga0105240_10075630
413 Ga0105240_10104309
414 Ga0111539_10000158
415 Ga0111539_10030229
416 Ga0111539_10056582
417 Ga0105245_10004893
418 Ga0105247_10008676
419 Ga0105247_10013984
420 Ga0105247_10118532
421 Ga0105243_10225447
422 Ga0105241_10005417
423 Ga0105241_10008629
424 Ga0105241_10059888
425 Ga0105242_10027643
426 Ga0105248_10000018
427 Ga0105248_10014436
428 Ga0105237_10066382
429 Ga0105237_10113448
430 Ga0105238_10114015
431 Ga0105249_10003464
432 Ga0105239_10032722
433 Ga0105246_10006340
434 Ga0157370_10012239
435 Ga0157370_10028835
436 Ga0157369_10003260
437 Ga0157369_10020486
438 Ga0157374_10102852
439 Ga0163162_10298309
440 Ga0157375_10048112
441 Ga0163163_10002431
442 Ga0163163_10038252
443 Ga0157377_10041251
444 Ga0157379_10006815
445 Ga0163161_10010375
446 Ga0206356_10229726
447 Ga0207713_1058894
448 Ga0207710_10007118
449 Ga0207710_10008091
450 Ga0207688_10000570
451 Ga0207688_10098610
452 Ga0207680_10050991
453 Ga0207647_10089015
454 Ga0207645_10008746
455 Ga0207643_10000323
456 Ga0207705_10014438
457 Ga0207654_10077220
458 Ga0207707_10047190
459 Ga0207671_10121552
460 Ga0207693_10002123
461 Ga0207663_10000898
462 Ga0207660_10008880
463 Ga0207662_10028243
464 Ga0207657_10039846
465 Ga0207657_10059139
466 Ga0207649_10042909
467 Ga0207652_10117094
468 Ga0207694_10256715
469 Ga0207650_10005310
470 Ga0207659_10022958
471 Ga0207687_10112319
472 Ga0207644_10007263
473 Ga0207644_10027637
474 Ga0207690_10106648
475 Ga0207706_10007205
476 Ga0207706_10067964
477 Ga0207686_10026173
478 Ga0207670_10078700
479 Ga0207669_10157033
480 Ga0207665_10002367
481 Ga0207691_10063246
482 Ga0207711_10000240
483 Ga0207711_10044937
484 Ga0207689_10001582
485 Ga0207689_10008478
486 Ga0207661_10065067
487 Ga0207679_10004470
488 Ga0207667_10007161
489 Ga0207667_10008331
490 Ga0207651_10028522
491 Ga0207712_10054601
492 Ga0207668_10014393
493 Ga0207668_10026535
494 Ga0207640_10055533
495 Ga0207658_10026717
496 Ga0207677_10021357
497 Ga0207703_10011156
498 Ga0207703_10051326
499 Ga0207639_10080536
500 Ga0207678_10006136
501 Ga0207678_10073844
502 Ga0207708_10000023
503 Ga0207708_10037287
504 Ga0207702_10012202
505 Ga0207702_10034170
506 Ga0207641_10002936
507 Ga0207641_10023439
508 Ga0207676_10004806
509 Ga0207674_10079233
510 Ga0207674_10132605
511 Ga0207675_100005797
512 Ga0207675_100102895
513 Ga0207683_10007063
514 Ga0207683_10049319
515 Ga0207698_10013340
516 Ga0207698_10017633
517 Ga0207698_10101555
518 Ga0207428_10000715
519 Ga0207428_10010981
520 Ga0268266_10001214
521 Ga0268266_10073252
522 Ga0268265_10000008
523 Ga0268265_10041515
524 Ga0268264_10000031
525 Ga0307513_10000049
526 Ga0307513_10024195
527 Ga0307513_10061198
528 Ga0307509_10242045
529 Ga0307408_100005832
530 Ga0307405_10001336
531 Ga0307405_10009011
532 Ga0307413_10017089
533 Ga0307410_10006847
534 Ga0307410_10012041
535 Ga0307406_10000083
536 Ga0307406_10002544
537 Ga0307407_10004180
538 Ga0307412_10027524
539 Ga0307409_100000054
540 Ga0307409_100000288
541 Ga0307416_100000105
542 Ga0307416_100006421
543 Ga0307416_100017572
544 Ga0307416_100055683
545 Ga0307414_10011446
546 Ga0307415_100000174
547 Ga0373938_0022807
548 Ga0373949_0006138
549 Ga0373939_0000981
550 Ga0373960_0014249
551 Ga0439436_0002751
552 Ga0439438_018833
553 Ga0439457_001394
554 Ga0439463_005912
555 Ga0439463_012199
556 Ga0439463_028210
557 Ga0439458_0007019
558 Ga0439435_0007409
559 Ga0439459_0017293
560 Ga0439440_0004786
561 Ga0466965_0046146
562 Ga0466961_0074011
563 Ga0466961_0087250
564 Ga0466963_0000452
565 Ga0466963_0018924
566 Ga0466964_0007534
567 Ga0466971_0015428
568 Ga0466957_0003278
569 Ga0466957_0023515
570 Ga0466960_0013048
571 Ga0466960_0088445
572 Ga0466958_0030798
573 Ga0466967_0003089
574 Ga0466967_0004109
575 Ga0466967_0101513
576 Ga0466967_0156063
577 Ga0466967_0192314
578 Ga0495648_0051893
579 Ga0495661_0064242
580 Ga0496102_0000891
581 Ga0496102_0045803
582 Ga0496103_0000084
583 Ga0496104_0035579
584 Ga0496105_0002352
585 Ga0496106_0028334
586 Ga0496106_0032469
587 Ga0496107_0115036
588 Ga0496108_0011996
589 Ga0496108_0078363
590 Ga0496109_0026361
591 Ga0496109_0026454
592 Ga0496110_0028671
593 Ga0496110_0046474
594 Ga0496111_0015784
595 Ga0496111_0024608
596 Ga0496114_0035365
597 Ga0496115_0014193
598 Ga0496115_0021711
599 Ga0496116_0000474
600 Ga0496117_0046717
601 Ga0496118_0002773
602 Ga0496118_0026914
603 Ga0496118_0100022
604 Ga0496119_0000067
605 Ga0496119_0015302
606 Ga0496126_0000006
607 Ga0501035_0087491
608 Ga0501045_0231397
609 nmdc:mga09592_107037_c1
610 nmdc:mga08y16_16288_c1
611 nmdc:mga0n895_6934_c1
612 nmdc:mga0rr50_2900_c1
613 nmdc:mga0rr50_3637_c2
614 nmdc:mga0rr50_76423_c1
615 nmdc:mga08x19_12259_c1
616 nmdc:mga08x19_1920_c1
617 nmdc:mga0a205_12884_c1
618 nmdc:mga0a205_14134_c1
619 Ga0500583_0018083
620 Ga0466962_0027087
621 Ga0466962_0056394
622 2517764541
623 2508674167
624 2559431152
625 2644504175
626 2644526747
627 2644670513
628 2671837066
629 2676198761
630 2689960048
631 2689991958
632 2774843339
633 2774855222
634 2791911405
635 2866556745
636 2883825281
637 2887443949
638 2895890060
639 3003009261
640 8002776893
641 8002785261
642 8056059202

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01406

tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

78

380

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hfo-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mshc in complex with compound 7d 0.968 1 372
3c8z-assembly1.cif.gz_A the 1.6 a crystal structure of mshc: the rate limiting enzyme in the mycothiol biosynthetic pathway 0.9679 1 372
8hfo-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mshc in complex with compound 7d 0.9654 1 372
8hfm-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mshc 0.9558 1 372
8hfm-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mshc 0.9359 1 372
ID Description Score Start End Superfamily
3c8zB02 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.9929 290 372 1.20.120.640
3c8zB02 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.9811 290 372 1.20.120.640
3c8zA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9702 1 289 3.40.50.620
af_P9WFW1_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9226 2 285 3.40.50.620
af_Q2G2M6_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9219 1 289 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A4Q4D2X0-F1-model_v4 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (EC 6.3.1.13) (Mycothiol ligase) 0.979 2 291 GO:0004817
GO:0005524
GO:0005829
GO:0006423
GO:0010125
GO:0035446
AF-A0A838G0G4-F1-model_v4 Class I tRNA ligase family protein 0.9759 1 247 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A7X8B5I8-F1-model_v4 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (EC 6.3.1.13) (Mycothiol ligase) 0.9755 2 372 GO:0004817
GO:0005524
GO:0005829
GO:0006423
GO:0010125
GO:0035446
AF-A0A5Q2FCR4-F1-model_v4 Multifunctional fusion protein [Includes: L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (L-Cys:GlcN-Ins ligase) (EC 6.3.1.13) (Mycothiol ligase) (MSH ligase); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)] 0.975 1 372 GO:0000105
GO:0004636
GO:0004817
GO:0005524
GO:0005829
GO:0006423
GO:0008270
GO:0010125
GO:0035446
AF-A0A5Q2FCR4-F1-model_v4 Multifunctional fusion protein [Includes: L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (L-Cys:GlcN-Ins ligase) (EC 6.3.1.13) (Mycothiol ligase) (MSH ligase); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)] 0.9724 1 372 GO:0000105
GO:0004636
GO:0004817
GO:0005524
GO:0005829
GO:0006423
GO:0008270
GO:0010125
GO:0035446

Map