F405173

General Info

Members Datasets Scaffolds Average Seq Length
319 165 271 568

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_0328838|Ga0436360_0328838_1154_3013
Length 619
Sequence MTFVLSFPFGHFLAWIMDGRYHAPGWLRWIERRVDTGPQNWKQYTLSLLLFNTVMFVVGFLLLACQPLFPLNPNGMKMLSPSTIFNTVTSFMTNTNLQHYSGDQHLSYFSQVTFILWNMFLSASVGFCSLAAIIRGLRGDAHMGNYYLDMWRVFAYTFVPCSLIMAVLLLAAGVPMTLAPYAQVSTLEPGSMGKTDDGKDQPQVIARGPVAAVMPIKHFGTNGGGFFGANSSHPFENPTALTNVLECMNFLLYPFSLVVMFGVMLKRMRHAYLIYAVMMSMLIGMVIWSVSTDTMQPNPGLEARTDLVYPQDVPQSDGTLKPVWVVAHSGRSADLVDRDPAKNGSDKPAATQLPALPVDQALGNLEGKELRFGTSAGAIFSALTTAISCGSVNCMHDSLNPLAGVSPMVGMWLNCVFGGKGVGVINMLVYIIIAVFLSGLMVGRTPEYLGKKIEAREMKLAMLALLIHPLMILGPAGAFAALDWGRKATNNPGAHGFSEILYEFSSSSANNGSGFEGLGDTWGFNDNPTPAPESMQWDIATGLVMLFSRYIPVIAPLALAGSIMAKKATPQTSGTLRTDTLTFGLFLTGTVLIVGALLFLPAAVLGPVAEHWGPLPFGG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
3 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
4 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
5 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
6 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
7 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
8 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
9 2671180694 Paenibacillus sp. A3 Isolate Unclassified
10 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
11 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
12 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
13 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
14 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
15 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
16 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
17 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
18 2857472729 Cohnella sp. R-74144 Isolate Unclassified
19 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
20 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
21 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
22 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
23 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
24 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
25 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
26 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
27 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
28 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
29 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
30 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
31 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
32 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
33 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
34 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
35 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
36 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
37 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
38 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
39 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
40 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
41 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
42 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
43 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
44 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
45 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
74 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
75 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
78 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
79 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
80 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
83 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
85 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
86 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
87 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
88 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
89 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
90 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
91 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
111 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
142 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
143 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
144 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
160 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
161 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
162 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
163 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
164 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
165 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.77
Metatranscriptomes 0.63
Isolates 11.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.27
Nodule 0.94
Rhizoplane 1.25
Rhizosphere 81.82
Stem 0
Stem Tuber 0
Unclassified 9.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3361192 2162886007 Bacteria 9557
2 JGI25159J45721_1006377 3300002987 Bacteria 3539
3 JGI25151J46595_10001327 3300003187 Bacteria 17307
4 JGI25151J46595_10001422 3300003187 Bacteria 16352
5 JGI25151J46595_10023306 3300003187 Bacteria 2552
6 Ga0055538_1000500 3300003751 Bacteria 14098
7 Ga0055541_1000339 3300003841 Bacteria 14722
8 Ga0065704_10000192 3300005289 Bacteria 216848
9 Ga0070658_10004581 3300005327 Bacteria 11233
10 Ga0070689_100011495 3300005340 Bacteria 6345
11 Ga0070713_100017771 3300005436 Bacteria 5391
12 Ga0070710_10029920 3300005437 Bacteria 2926
13 Ga0070708_100061528 3300005445 Unclassified 3354
14 Ga0070706_100020135 3300005467 Bacteria 6148
15 Ga0070706_100044317 3300005467 Bacteria 4109
16 Ga0070707_100182200 3300005468 Bacteria 2048
17 Ga0070699_100048819 3300005518 Unclassified 3663
18 Ga0070697_100038220 3300005536 Bacteria 3878
19 Ga0070697_100041843 3300005536 Bacteria 3709
20 Ga0070697_100054566 3300005536 Unclassified 3248
21 Ga0068858_100027802 3300005842 Bacteria 5255
22 Ga0081539_10001295 3300005985 Bacteria 43898
23 Ga0075364_10000018 3300006051 Bacteria 55324
24 Ga0075428_100038045 3300006844 Bacteria 5295
25 Ga0075433_10026979 3300006852 Bacteria 4868
26 Ga0075434_100142887 3300006871 Bacteria 2413
27 Ga0075429_100036251 3300006880 Bacteria 4289
28 Ga0105250_10039491 3300009092 Bacteria 1892
29 Ga0105237_10020704 3300009545 Bacteria 6774
30 Ga0157373_10016153 3300013100 Bacteria 5449
31 Ga0157370_10000927 3300013104 Bacteria 37224
32 Ga0163162_10077279 3300013306 Bacteria 3392
33 Ga0157379_10002518 3300014968 Bacteria 15344
34 Ga0209784_100197 3300025224 Bacteria 43979
35 Ga0209566_100077 3300025225 Bacteria 160414
36 Ga0209147_104121 3300025229 Bacteria 2524
37 Ga0209258_101446 3300025242 Bacteria 8326
38 Ga0209130_1003452 3300025284 Bacteria 6696
39 Ga0209025_1000130 3300025294 Bacteria 198745
40 Ga0209025_1001675 3300025294 Bacteria 27113
41 Ga0209025_1001978 3300025294 Bacteria 23531
42 Ga0209025_1003399 3300025294 Bacteria 15142
43 Ga0209025_1003432 3300025294 Bacteria 15026
44 Ga0209025_1003713 3300025294 Bacteria 14036
45 Ga0207705_10008279 3300025909 Bacteria 7595
46 Ga0207671_10013564 3300025914 Bacteria 6486
47 Ga0207646_10043275 3300025922 Unclassified 4044
48 Ga0207664_10055281 3300025929 Bacteria 3150
49 Ga0207670_10008985 3300025936 Bacteria 5669
50 Ga0207665_10066994 3300025939 Bacteria 2444
51 Ga0207703_10088514 3300026035 Bacteria 2599
52 Ga0207639_10082151 3300026041 Bacteria 2554
53 Ga0265337_1000981 3300028556 Bacteria 14919
54 Ga0265337_1006243 3300028556 Bacteria 4622
55 Ga0265337_1006456 3300028556 Bacteria 4518
56 Ga0265337_1016766 3300028556 Bacteria 2362
57 Ga0265326_10000418 3300028558 Bacteria 16879
58 Ga0265326_10002060 3300028558 Bacteria 6852
59 Ga0265326_10006946 3300028558 Bacteria 3490
60 Ga0265319_1000313 3300028563 Bacteria 36057
61 Ga0265319_1000321 3300028563 Bacteria 35586
62 Ga0265334_10001881 3300028573 Bacteria 9966
63 Ga0265334_10008321 3300028573 Bacteria 4411
64 Ga0265318_10002780 3300028577 Bacteria 9167
65 Ga0265318_10008365 3300028577 Unclassified 4611
66 Ga0265323_10005977 3300028653 Bacteria 5145
67 Ga0265323_10013836 3300028653 Bacteria 3209
68 Ga0265322_10001114 3300028654 Bacteria 9263
69 Ga0265336_10000583 3300028666 Bacteria 20556
70 Ga0265338_10000295 3300028800 Bacteria 89990
71 Ga0265338_10001987 3300028800 Bacteria 31806
72 Ga0265338_10002016 3300028800 Bacteria 31504
73 Ga0265338_10004322 3300028800 Bacteria 19275
74 Ga0265338_10007461 3300028800 Bacteria 13560
75 Ga0265338_10016178 3300028800 Bacteria 8136
76 Ga0265338_10017832 3300028800 Bacteria 7633
77 Ga0265338_10026443 3300028800 Bacteria 5852
78 Ga0265338_10073475 3300028800 Bacteria 2914
79 Ga0265324_10001462 3300029957 Bacteria 13446
80 Ga0265324_10002892 3300029957 Bacteria 8432
81 Ga0265324_10003330 3300029957 Bacteria 7707
82 Ga0265324_10005077 3300029957 Bacteria 5760
83 Ga0265760_10003177 3300031090 Bacteria 4807
84 Ga0265760_10007912 3300031090 Bacteria 3036
85 Ga0265330_10000820 3300031235 Bacteria 19532
86 Ga0265330_10005072 3300031235 Bacteria 6603
87 Ga0265330_10012028 3300031235 Bacteria 4048
88 Ga0265330_10015950 3300031235 Bacteria 3472
89 Ga0265332_10000096 3300031238 Bacteria 76689
90 Ga0265332_10000991 3300031238 Bacteria 16736
91 Ga0265332_10002524 3300031238 Bacteria 9285
92 Ga0265332_10015069 3300031238 Bacteria 3415
93 Ga0265328_10001380 3300031239 Bacteria 11213
94 Ga0265328_10005172 3300031239 Bacteria 5610
95 Ga0265320_10003951 3300031240 Bacteria 9783
96 Ga0265320_10004072 3300031240 Bacteria 9600
97 Ga0265320_10007757 3300031240 Bacteria 6631
98 Ga0265325_10000943 3300031241 Bacteria 21002
99 Ga0265325_10003324 3300031241 Bacteria 10576
100 Ga0265329_10001226 3300031242 Bacteria 12582
101 Ga0265340_10001730 3300031247 Bacteria 12522
102 Ga0265340_10002722 3300031247 Bacteria 10066
103 Ga0265340_10004272 3300031247 Bacteria 8011
104 Ga0265339_10000156 3300031249 Bacteria 56479
105 Ga0265339_10000482 3300031249 Bacteria 31161
106 Ga0265339_10001068 3300031249 Bacteria 20837
107 Ga0265331_10000184 3300031250 Bacteria 76712
108 Ga0265331_10000492 3300031250 Bacteria 37523
109 Ga0265331_10000510 3300031250 Bacteria 36362
110 Ga0265316_10000620 3300031344 Bacteria 39538
111 Ga0265316_10009505 3300031344 Bacteria 8952
112 Ga0265316_10012095 3300031344 Bacteria 7751
113 Ga0265316_10012358 3300031344 Bacteria 7662
114 Ga0265316_10017537 3300031344 Bacteria 6183
115 Ga0265316_10019707 3300031344 Bacteria 5761
116 Ga0265316_10020261 3300031344 Bacteria 5666
117 Ga0265316_10038059 3300031344 Bacteria 3878
118 Ga0265316_10046810 3300031344 Unclassified 3424
119 Ga0265313_10001090 3300031595 Bacteria 26166
120 Ga0265313_10003878 3300031595 Bacteria 11786
121 Ga0265313_10009226 3300031595 Bacteria 6430
122 Ga0265314_10000392 3300031711 Bacteria 59622
123 Ga0265314_10000500 3300031711 Bacteria 50661
124 Ga0265314_10000809 3300031711 Bacteria 37140
125 Ga0265314_10001760 3300031711 Bacteria 23376
126 Ga0265314_10002007 3300031711 Bacteria 21603
127 Ga0265342_10003908 3300031712 Bacteria 11969
128 Ga0265342_10004650 3300031712 Bacteria 10690
129 Ga0265342_10005280 3300031712 Bacteria 9900
130 Ga0265342_10028404 3300031712 Unclassified 3484
131 Ga0307412_10001178 3300031911 Bacteria 14921
132 Ga0307414_10000914 3300032004 Bacteria 15107
133 Ga0436365_0342412 3300039437 Bacteria 4913
134 Ga0436360_0267603 3300039438 Bacteria 2651
135 Ga0436360_0328838 3300039438 Bacteria 3249
136 Ga0436361_0433640 3300039447 Bacteria 2875
137 Ga0436361_0460130 3300039447 Bacteria 3630
138 Ga0436361_0607523 3300039447 Bacteria 6098
139 Ga0453683_0023723 3300044673 Bacteria 3908
140 Ga0453684_0211038 3300044712 Bacteria 2257
141 Ga0451576_0034496 3300045051 Bacteria 5373
142 Ga0495580_0005429 3300046472 Bacteria 10533
143 Ga0495624_0038960 3300046690 Unclassified 3050
144 Ga0495674_0011518 3300047319 Bacteria 8345
145 Ga0495674_0029786 3300047319 Bacteria 4967
146 Ga0495602_0090604 3300048088 Unclassified 2539
147 Ga0496111_0000148 3300048914 Bacteria 31473
148 Ga0496116_0028922 3300048919 Bacteria 4004
149 Ga0496116_0060243 3300048919 Bacteria 2463
150 Ga0496116_0116246 3300048919 Bacteria 1559
151 Ga0496117_0016476 3300048920 Bacteria 6238
152 Ga0496119_0003237 3300048922 Bacteria 17048
153 Ga0496119_0013860 3300048922 Bacteria 6366
154 Ga0496120_0000059 3300048923 Bacteria 176517
155 Ga0496121_0000253 3300048924 Bacteria 113655
156 Ga0496122_0011345 3300048925 Bacteria 9041
157 Ga0496123_0034938 3300048926 Bacteria 3591
158 Ga0496124_0000372 3300048927 Bacteria 81692
159 Ga0496124_0072665 3300048927 Bacteria 2848
160 Ga0496125_0000472 3300048928 Bacteria 71418
161 Ga0496126_0001020 3300048929 Bacteria 47573
162 Ga0501031_0002885 3300049568 Bacteria 10990
163 Ga0501032_0047269 3300049569 Bacteria 2906
164 Ga0501033_0005561 3300049570 Bacteria 9967
165 Ga0501033_0021029 3300049570 Bacteria 4925
166 Ga0501033_0113895 3300049570 Bacteria 1966
167 Ga0501034_0002463 3300049571 Bacteria 22318
168 Ga0501034_0224218 3300049571 Bacteria 1831
169 Ga0501036_0010610 3300049572 Bacteria 7612
170 Ga0501036_0052564 3300049572 Bacteria 3450
171 Ga0501038_0015940 3300049574 Bacteria 6829
172 Ga0501039_0002307 3300049575 Bacteria 14165
173 Ga0501039_0015687 3300049575 Bacteria 5795
174 Ga0501040_0006139 3300049576 Bacteria 7792
175 Ga0501040_0007032 3300049576 Bacteria 7293
176 Ga0501040_0010157 3300049576 Bacteria 6153
177 Ga0501040_0079914 3300049576 Bacteria 2264
178 Ga0501041_0001947 3300049577 Bacteria 11591
179 Ga0501041_0005123 3300049577 Bacteria 7645
180 Ga0501041_0035424 3300049577 Bacteria 3023
181 Ga0501041_0056477 3300049577 Bacteria 2399
182 Ga0501042_0035590 3300049578 Bacteria 3532
183 Ga0501042_0045046 3300049578 Bacteria 3144
184 Ga0501042_0047760 3300049578 Bacteria 3052
185 Ga0501043_0050368 3300049579 Bacteria 3273
186 Ga0501046_0005927 3300049580 Bacteria 10886
187 Ga0501046_0023624 3300049580 Bacteria 5053
188 Ga0501046_0042826 3300049580 Bacteria 3608
189 Ga0501046_0045016 3300049580 Bacteria 3508
190 Ga0501046_0059815 3300049580 Bacteria 2983
191 Ga0501047_0021428 3300049581 Bacteria 6205
192 Ga0501048_0009603 3300049582 Bacteria 7259
193 Ga0501048_0074161 3300049582 Bacteria 2401
194 Ga0501048_0093139 3300049582 Bacteria 2125
195 Ga0501070_0022561 3300049586 Bacteria 5272
196 Ga0501071_0005135 3300049587 Bacteria 8383
197 Ga0501071_0021219 3300049587 Bacteria 4521
198 Ga0501071_0042170 3300049587 Bacteria 3268
199 Ga0501071_0042199 3300049587 Bacteria 3267
200 Ga0501071_0057230 3300049587 Bacteria 2817
201 Ga0501072_0000899 3300049588 Bacteria 21818
202 Ga0501072_0005731 3300049588 Bacteria 9458
203 Ga0501072_0065718 3300049588 Bacteria 2860
204 Ga0501072_0070655 3300049588 Bacteria 2757
205 Ga0501074_0014952 3300049590 Bacteria 5647
206 Ga0501075_0003275 3300049591 Bacteria 10839
207 Ga0501075_0003315 3300049591 Bacteria 10769
208 Ga0501075_0006680 3300049591 Bacteria 7955
209 Ga0501075_0008590 3300049591 Bacteria 7120
210 Ga0501075_0061520 3300049591 Bacteria 2829
211 Ga0501076_0005959 3300049592 Bacteria 8802
212 Ga0501076_0007773 3300049592 Bacteria 7815
213 Ga0501076_0012163 3300049592 Bacteria 6433
214 Ga0501076_0063437 3300049592 Bacteria 2944
215 Ga0501076_0070164 3300049592 Bacteria 2801
216 Ga0501076_0142319 3300049592 Bacteria 1949
217 Ga0501077_0003075 3300049593 Bacteria 10023
218 Ga0501077_0009523 3300049593 Bacteria 6041
219 Ga0501077_0054693 3300049593 Bacteria 2534
220 Ga0501077_0107400 3300049593 Bacteria 1769
221 Ga0501224_000015 3300049664 Bacteria 90971
222 Ga0501233_000083 3300049668 Bacteria 12486
223 Ga0501235_004243 3300049669 Bacteria 3106
224 Ga0501225_0000038 3300049705 Bacteria 45168
225 Ga0501079_0013386 3300049741 Bacteria 6256
226 Ga0501079_0023590 3300049741 Bacteria 4722
227 Ga0501079_0024052 3300049741 Bacteria 4673
228 Ga0501079_0027740 3300049741 Bacteria 4343
229 Ga0501079_0031001 3300049741 Bacteria 4108
230 Ga0501080_0001331 3300049742 Bacteria 20588
231 Ga0501080_0032652 3300049742 Bacteria 4856
232 Ga0501080_0067133 3300049742 Bacteria 3336
233 Ga0501080_0101650 3300049742 Bacteria 2667
234 Ga0501080_0208276 3300049742 Bacteria 1793
235 Ga0501081_0002516 3300049743 Bacteria 11555
236 Ga0501081_0004012 3300049743 Bacteria 9440
237 Ga0501081_0006633 3300049743 Bacteria 7524
238 Ga0501081_0007389 3300049743 Bacteria 7130
239 Ga0501081_0009581 3300049743 Bacteria 6316
240 Ga0501081_0031314 3300049743 Bacteria 3605
241 Ga0501081_0087189 3300049743 Bacteria 2192
242 Ga0501035_0003546 3300049822 Bacteria 14902
243 Ga0501035_0016572 3300049822 Bacteria 6795
244 Ga0501044_0000208 3300049823 Bacteria 74656
245 Ga0501044_0068736 3300049823 Bacteria 3608
246 Ga0501044_0106462 3300049823 Bacteria 2816
247 Ga0501045_0003533 3300049824 Bacteria 10718
248 Ga0501045_0010451 3300049824 Bacteria 6499
249 Ga0501045_0082148 3300049824 Bacteria 2376
250 Ga0501226_000027 3300049853 Bacteria 89557
251 nmdc:mga00v17_36_c1 3300050491 Bacteria 85171
252 nmdc:mga06r32_51733_c1 3300050510 Bacteria 3932
253 nmdc:mga0a205_27662_c1 3300050515 Bacteria 5416
254 nmdc:mga0a205_55372_c1 3300050515 Bacteria 3831
255 Ga0500618_000742 3300053125 Bacteria 18545
256 Ga0501084_0013317 3300054114 Bacteria 6804
257 Ga0501084_0021545 3300054114 Bacteria 5372
258 Ga0501084_0037537 3300054114 Bacteria 4048
259 Ga0501084_0082428 3300054114 Bacteria 2699
260 Ga0501084_0087342 3300054114 Bacteria 2618
261 Ga0501084_0152786 3300054114 Bacteria 1946
262 Ga0501084_0170379 3300054114 Bacteria 1838
263 Ga0501082_0001619 3300060353 Bacteria 19819
264 Ga0501082_0004374 3300060353 Bacteria 12344
265 Ga0501082_0008077 3300060353 Bacteria 9080
266 Ga0501082_0053408 3300060353 Bacteria 3483
267 Ga0501082_0070370 3300060353 Bacteria 3012
268 Ga0530510_0001884 3300061734 Bacteria 14318
269 Ga0530510_0002781 3300061734 Bacteria 12032
270 Ga0530510_0009440 3300061734 Bacteria 6841
271 Ga0530510_0034626 3300061734 Bacteria 3639

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300054114 Ga0501084_0037537 Ga0501084_0037537_2693_4000 429
2 3300046690 Ga0495624_0038960 Ga0495624_0038960_17_1531 449
3 3300049743 Ga0501081_0087189 Ga0501081_0087189_692_2173 463
4 3300048919 Ga0496116_0028922 Ga0496116_0028922_10_1470 475
5 3300049593 Ga0501077_0107400 Ga0501077_0107400_28_1491 486
6 3300054114 Ga0501084_0087342 Ga0501084_0087342_11_1618 499
7 3300048919 Ga0496116_0116246 Ga0496116_0116246_24_1529 501
8 3300009092 Ga0105250_10039491 Ga0105250_100394911 506
9 3300054114 Ga0501084_0170379 Ga0501084_0170379_204_1826 508
10 3300003187 JGI25151J46595_10023306 JGI25151J46595_100233061 515
11 3300002987 JGI25159J45721_1006377 JGI25159J45721_10063772 516
12 3300003187 JGI25151J46595_10001327 JGI25151J46595_1000132713 516
13 3300025284 Ga0209130_1003452 Ga0209130_10034524 516
14 3300025294 Ga0209025_1003399 Ga0209025_100339910 516
15 3300025294 Ga0209025_1003432 Ga0209025_100343210 516
16 3300025294 Ga0209025_1001978 Ga0209025_10019786 517
17 3300028556 Ga0265337_1006456 Ga0265337_10064563 517
18 3300028800 Ga0265338_10007461 Ga0265338_1000746110 517
19 3300005467 Ga0070706_100020135 Ga0070706_1000201352 518
20 3300005536 Ga0070697_100041843 Ga0070697_1000418432 518
21 3300049575 Ga0501039_0002307 Ga0501039_0002307_693_2369 522
22 3300049576 Ga0501040_0079914 Ga0501040_0079914_202_1878 522
23 3300049577 Ga0501041_0035424 Ga0501041_0035424_649_2325 522
24 3300049578 Ga0501042_0035590 Ga0501042_0035590_400_2076 522
25 3300049587 Ga0501071_0042170 Ga0501071_0042170_454_2130 522
26 3300049591 Ga0501075_0006680 Ga0501075_0006680_621_2297 522
27 3300049592 Ga0501076_0007773 Ga0501076_0007773_587_2263 522
28 3300049741 Ga0501079_0023590 Ga0501079_0023590_979_2655 522
29 3300049742 Ga0501080_0032652 Ga0501080_0032652_2531_4225 522
30 3300049742 Ga0501080_0101650 Ga0501080_0101650_519_2195 522
31 3300049743 Ga0501081_0007389 Ga0501081_0007389_5051_6727 522
32 3300060353 Ga0501082_0004374 Ga0501082_0004374_10119_11795 522
33 3300049576 Ga0501040_0010157 Ga0501040_0010157_2175_3854 523
34 3300049578 Ga0501042_0047760 Ga0501042_0047760_1264_2943 523
35 3300049580 Ga0501046_0042826 Ga0501046_0042826_1482_3161 523
36 3300049587 Ga0501071_0042199 Ga0501071_0042199_547_2226 523
37 3300049588 Ga0501072_0070655 Ga0501072_0070655_346_2025 523
38 3300049591 Ga0501075_0003275 Ga0501075_0003275_8026_9705 523
39 3300049592 Ga0501076_0063437 Ga0501076_0063437_697_2376 523
40 3300049593 Ga0501077_0009523 Ga0501077_0009523_2412_4094 523
41 3300049741 Ga0501079_0031001 Ga0501079_0031001_1874_3556 523
42 3300049742 Ga0501080_0067133 Ga0501080_0067133_556_2235 523
43 3300049742 Ga0501080_0208276 Ga0501080_0208276_13_1764 523
44 3300049743 Ga0501081_0002516 Ga0501081_0002516_1676_3358 523
45 3300049743 Ga0501081_0009581 Ga0501081_0009581_450_2129 523
46 3300049824 Ga0501045_0010451 Ga0501045_0010451_4243_5922 523
47 3300060353 Ga0501082_0008077 Ga0501082_0008077_2504_4186 523
48 3300060353 Ga0501082_0053408 Ga0501082_0053408_54_1733 523
49 3300061734 Ga0530510_0001884 Ga0530510_0001884_999_2678 523
50 3300049571 Ga0501034_0224218 Ga0501034_0224218_48_1733 524
51 3300031235 Ga0265330_10012028 Ga0265330_100120282 525
52 3300031238 Ga0265332_10000096 Ga0265332_1000009627 525
53 3300031250 Ga0265331_10000184 Ga0265331_1000018439 525
54 3300031344 Ga0265316_10000620 Ga0265316_1000062010 525
55 3300031711 Ga0265314_10002007 Ga0265314_100020079 525
56 3300048919 Ga0496116_0060243 Ga0496116_0060243_475_2157 525
57 3300048922 Ga0496119_0003237 Ga0496119_0003237_7837_9519 525
58 3300048923 Ga0496120_0000059 Ga0496120_0000059_165193_166875 525
59 3300048927 Ga0496124_0000372 Ga0496124_0000372_5711_7393 525
60 3300048929 Ga0496126_0001020 Ga0496126_0001020_34439_36121 525
61 3300049580 Ga0501046_0045016 Ga0501046_0045016_1787_3463 525
62 3300049587 Ga0501071_0057230 Ga0501071_0057230_151_1827 525
63 3300049591 Ga0501075_0061520 Ga0501075_0061520_913_2589 525
64 3300049824 Ga0501045_0082148 Ga0501045_0082148_189_1865 525
65 3300060353 Ga0501082_0070370 Ga0501082_0070370_924_2600 525
66 3300006871 Ga0075434_100142887 Ga0075434_1001428871 526
67 3300013306 Ga0163162_10077279 Ga0163162_100772794 527
68 3300048926 Ga0496123_0034938 Ga0496123_0034938_1775_3451 527
69 3300048927 Ga0496124_0072665 Ga0496124_0072665_281_1957 527
70 3300049592 Ga0501076_0142319 Ga0501076_0142319_297_1907 527
71 3300005445 Ga0070708_100061528 Ga0070708_1000615282 528
72 3300005467 Ga0070706_100044317 Ga0070706_1000443171 528
73 3300005518 Ga0070699_100048819 Ga0070699_1000488192 528
74 3300005536 Ga0070697_100054566 Ga0070697_1000545661 528
75 3300048914 Ga0496111_0000148 Ga0496111_0000148_2283_3959 528
76 3300005536 Ga0070697_100038220 Ga0070697_1000382204 529
77 3300031090 Ga0265760_10003177 Ga0265760_100031771 529
78 3300025294 Ga0209025_1001675 Ga0209025_100167519 530
79 3300028800 Ga0265338_10002016 Ga0265338_100020162 530
80 3300029957 Ga0265324_10003330 Ga0265324_100033302 530
81 3300039437 Ga0436365_0342412 Ga0436365_0342412_2083_3897 530
82 3300049576 Ga0501040_0007032 Ga0501040_0007032_2215_3894 531
83 3300049577 Ga0501041_0005123 Ga0501041_0005123_2917_4596 531
84 3300049582 Ga0501048_0093139 Ga0501048_0093139_421_2100 531
85 3300049588 Ga0501072_0005731 Ga0501072_0005731_7121_8800 531
86 3300049591 Ga0501075_0003315 Ga0501075_0003315_6709_8388 531
87 3300049592 Ga0501076_0005959 Ga0501076_0005959_2457_4136 531
88 3300049593 Ga0501077_0054693 Ga0501077_0054693_25_1704 531
89 3300049741 Ga0501079_0013386 Ga0501079_0013386_3822_5501 531
90 3300049743 Ga0501081_0006633 Ga0501081_0006633_2532_4211 531
91 3300053125 Ga0500618_000742 Ga0500618_000742_16515_18191 531
92 3300061734 Ga0530510_0002781 Ga0530510_0002781_2565_4244 531
93 3300005985 Ga0081539_10001295 Ga0081539_1000129519 532
94 3300031344 Ga0265316_10019707 Ga0265316_100197072 532
95 3300039438 Ga0436360_0328838 Ga0436360_0328838_1154_3013 532
96 3300049577 Ga0501041_0056477 Ga0501041_0056477_18_1712 532
97 3300049588 Ga0501072_0065718 Ga0501072_0065718_1056_2750 532
98 3300039447 Ga0436361_0433640 Ga0436361_0433640_832_2625 534
99 3300003751 Ga0055538_1000500 Ga0055538_100050011 535
100 3300025224 Ga0209784_100197 Ga0209784_10019718 535
101 3300025229 Ga0209147_104121 Ga0209147_1041212 535
102 3300048920 Ga0496117_0016476 Ga0496117_0016476_2109_3785 535
103 3300048922 Ga0496119_0013860 Ga0496119_0013860_3808_5484 535
104 3300048925 Ga0496122_0011345 Ga0496122_0011345_5283_6959 535
105 3300048928 Ga0496125_0000472 Ga0496125_0000472_68840_70516 535
106 3300028800 Ga0265338_10001987 Ga0265338_1000198716 536
107 3300003187 JGI25151J46595_10001422 JGI25151J46595_100014222 537
108 3300025294 Ga0209025_1000130 Ga0209025_100013022 537
109 iso_pu_bacteria 8057582654 8057584432 537
110 iso_pu_bacteria 2671180531 2673166623 538
111 iso_pu_bacteria 2721755693 2723602835 538
112 iso_pu_bacteria 2728369359 2730138813 538
113 iso_pu_bacteria 2751185905 2753809542 538
114 iso_pu_bacteria 2802428803 2802436626 538
115 iso_pu_bacteria 2883087390 2883092060 538
116 iso_pu_bacteria 2889276214 2889278799 538
117 iso_pu_bacteria 2889415604 2889417095 538
118 iso_pu_bacteria 2904595352 2904598611 538
119 iso_pu_bacteria 2907202186 2907204742 538
120 iso_pu_bacteria 648028048 648169167 538
121 3300049571 Ga0501034_0002463 Ga0501034_0002463_9862_11541 539
122 iso_pu_bacteria 2563366752 2563928108 539
123 iso_pu_bacteria 2671180694 2673822648 539
124 iso_pu_bacteria 2857472729 2857474148 539
125 iso_pu_bacteria 2925326138 2925334401 539
126 iso_pu_bacteria 2929206907 2929207409 539
127 iso_pu_bacteria 2938649242 2938649257 539
128 iso_pu_bacteria 2939702853 2939707977 539
129 iso_pu_bacteria 2971403814 2971406181 539
130 iso_pu_bacteria 8054795415 8054800829 539
131 iso_pu_bacteria 8057473075 8057473937 539
132 iso_pu_bacteria 8057733483 8057737449 539
133 3300009545 Ga0105237_10020704 Ga0105237_100207043 540
134 3300025914 Ga0207671_10013564 Ga0207671_100135645 540
135 iso_pu_bacteria 2548877040 2550905458 540
136 iso_pu_bacteria 2571042143 2571527659 540
137 iso_pu_bacteria 2600255286 2601637623 540
138 iso_pu_bacteria 2728368933 2728529244 540
139 iso_pu_bacteria 2881644220 2881649347 540
140 iso_pu_bacteria 8046991243 8046993378 540
141 iso_pu_bacteria 8055632911 8055633120 540
142 3300005327 Ga0070658_10004581 Ga0070658_1000458110 541
143 3300013100 Ga0157373_10016153 Ga0157373_100161533 541
144 3300013104 Ga0157370_10000927 Ga0157370_100009279 541
145 3300025909 Ga0207705_10008279 Ga0207705_100082797 541
146 3300044673 Ga0453683_0023723 Ga0453683_0023723_348_2165 541
147 3300005436 Ga0070713_100017771 Ga0070713_1000177712 542
148 3300005437 Ga0070710_10029920 Ga0070710_100299202 542
149 3300005468 Ga0070707_100182200 Ga0070707_1001822001 542
150 3300006844 Ga0075428_100038045 Ga0075428_1000380454 542
151 3300006852 Ga0075433_10026979 Ga0075433_100269793 542
152 3300006880 Ga0075429_100036251 Ga0075429_1000362512 542
153 3300014968 Ga0157379_10002518 Ga0157379_100025188 542
154 3300025922 Ga0207646_10043275 Ga0207646_100432751 542
155 3300025929 Ga0207664_10055281 Ga0207664_100552812 542
156 3300025939 Ga0207665_10066994 Ga0207665_100669941 542
157 3300026041 Ga0207639_10082151 Ga0207639_100821511 542
158 3300028653 Ga0265323_10013836 Ga0265323_100138362 542
159 3300028800 Ga0265338_10004322 Ga0265338_100043222 542
160 3300028800 Ga0265338_10026443 Ga0265338_100264433 542
161 3300031090 Ga0265760_10007912 Ga0265760_100079122 542
162 3300031235 Ga0265330_10015950 Ga0265330_100159502 542
163 3300031238 Ga0265332_10000991 Ga0265332_100009915 542
164 3300031238 Ga0265332_10015069 Ga0265332_100150691 542
165 3300031239 Ga0265328_10005172 Ga0265328_100051725 542
166 3300031240 Ga0265320_10007757 Ga0265320_100077572 542
167 3300031241 Ga0265325_10000943 Ga0265325_1000094316 542
168 3300031249 Ga0265339_10000482 Ga0265339_1000048210 542
169 3300031249 Ga0265339_10001068 Ga0265339_100010683 542
170 3300031250 Ga0265331_10000492 Ga0265331_1000049222 542
171 3300031250 Ga0265331_10000510 Ga0265331_1000051027 542
172 3300031344 Ga0265316_10012095 Ga0265316_100120952 542
173 3300031344 Ga0265316_10020261 Ga0265316_100202613 542
174 3300031344 Ga0265316_10038059 Ga0265316_100380592 542
175 3300031595 Ga0265313_10001090 Ga0265313_1000109015 542
176 3300031711 Ga0265314_10000392 Ga0265314_1000039248 542
177 3300031711 Ga0265314_10000809 Ga0265314_1000080915 542
178 3300031711 Ga0265314_10001760 Ga0265314_1000176014 542
179 3300031712 Ga0265342_10004650 Ga0265342_100046505 542
180 3300039438 Ga0436360_0267603 Ga0436360_0267603_672_2486 542
181 3300039447 Ga0436361_0460130 Ga0436361_0460130_1117_2931 542
182 3300039447 Ga0436361_0607523 Ga0436361_0607523_2912_4729 542
183 3300046472 Ga0495580_0005429 Ga0495580_0005429_2421_4238 542
184 3300047319 Ga0495674_0011518 Ga0495674_0011518_3312_5114 542
185 3300050510 nmdc:mga06r32_51733_c1 nmdc:mga06r32_51733_c1_107_1924 542
186 3300050515 nmdc:mga0a205_27662_c1 nmdc:mga0a205_27662_c1_2576_4393 542
187 3300050515 nmdc:mga0a205_55372_c1 nmdc:mga0a205_55372_c1_415_2232 542
188 3300005842 Ga0068858_100027802 Ga0068858_1000278022 543
189 3300026035 Ga0207703_10088514 Ga0207703_100885143 543
190 3300031235 Ga0265330_10005072 Ga0265330_100050725 543
191 3300031344 Ga0265316_10017537 Ga0265316_100175375 543
192 3300047319 Ga0495674_0029786 Ga0495674_0029786_913_2736 543
193 3300048088 Ga0495602_0090604 Ga0495602_0090604_355_2178 543
194 3300003841 Ga0055541_1000339 Ga0055541_100033910 544
195 3300025225 Ga0209566_100077 Ga0209566_10007758 544
196 3300025242 Ga0209258_101446 Ga0209258_1014464 544
197 3300025294 Ga0209025_1003713 Ga0209025_10037131 544
198 iso_pu_bacteria 2687453341 2688395891 544
199 iso_pu_bacteria 2713897090 2715498686 544
200 3300028556 Ga0265337_1000981 Ga0265337_10009818 545
201 3300028556 Ga0265337_1006243 Ga0265337_10062432 545
202 3300028556 Ga0265337_1016766 Ga0265337_10167662 545
203 3300028558 Ga0265326_10000418 Ga0265326_1000041814 545
204 3300028558 Ga0265326_10002060 Ga0265326_100020604 545
205 3300028558 Ga0265326_10006946 Ga0265326_100069462 545
206 3300028563 Ga0265319_1000313 Ga0265319_100031327 545
207 3300028563 Ga0265319_1000313 Ga0265319_100031328 545
208 3300028563 Ga0265319_1000321 Ga0265319_100032114 545
209 3300028563 Ga0265319_1000321 Ga0265319_10003218 545
210 3300028573 Ga0265334_10001881 Ga0265334_100018815 545
211 3300028573 Ga0265334_10008321 Ga0265334_100083213 545
212 3300028577 Ga0265318_10002780 Ga0265318_100027803 545
213 3300028577 Ga0265318_10008365 Ga0265318_100083653 545
214 3300028653 Ga0265323_10005977 Ga0265323_100059772 545
215 3300028653 Ga0265323_10005977 Ga0265323_100059774 545
216 3300028654 Ga0265322_10001114 Ga0265322_100011142 545
217 3300028666 Ga0265336_10000583 Ga0265336_1000058316 545
218 3300028800 Ga0265338_10000295 Ga0265338_1000029515 545
219 3300028800 Ga0265338_10000295 Ga0265338_1000029521 545
220 3300028800 Ga0265338_10007461 Ga0265338_100074615 545
221 3300028800 Ga0265338_10016178 Ga0265338_100161783 545
222 3300028800 Ga0265338_10016178 Ga0265338_100161784 545
223 3300028800 Ga0265338_10017832 Ga0265338_100178323 545
224 3300028800 Ga0265338_10073475 Ga0265338_100734752 545
225 3300029957 Ga0265324_10001462 Ga0265324_100014622 545
226 3300029957 Ga0265324_10002892 Ga0265324_100028926 545
227 3300029957 Ga0265324_10005077 Ga0265324_100050773 545
228 3300031235 Ga0265330_10000820 Ga0265330_1000082015 545
229 3300031238 Ga0265332_10002524 Ga0265332_100025243 545
230 3300031238 Ga0265332_10002524 Ga0265332_100025244 545
231 3300031239 Ga0265328_10001380 Ga0265328_100013802 545
232 3300031240 Ga0265320_10003951 Ga0265320_100039517 545
233 3300031240 Ga0265320_10004072 Ga0265320_100040726 545
234 3300031241 Ga0265325_10003324 Ga0265325_100033246 545
235 3300031242 Ga0265329_10001226 Ga0265329_100012262 545
236 3300031247 Ga0265340_10001730 Ga0265340_100017303 545
237 3300031247 Ga0265340_10002722 Ga0265340_100027225 545
238 3300031247 Ga0265340_10004272 Ga0265340_100042722 545
239 3300031249 Ga0265339_10000156 Ga0265339_1000015619 545
240 3300031249 Ga0265339_10000156 Ga0265339_1000015620 545
241 3300031344 Ga0265316_10009505 Ga0265316_100095054 545
242 3300031344 Ga0265316_10012358 Ga0265316_100123583 545
243 3300031344 Ga0265316_10012358 Ga0265316_100123584 545
244 3300031344 Ga0265316_10046810 Ga0265316_100468102 545
245 3300031595 Ga0265313_10003878 Ga0265313_100038781 545
246 3300031595 Ga0265313_10009226 Ga0265313_100092267 545
247 3300031711 Ga0265314_10000500 Ga0265314_1000050035 545
248 3300031711 Ga0265314_10000500 Ga0265314_1000050036 545
249 3300031712 Ga0265342_10003908 Ga0265342_100039088 545
250 3300031712 Ga0265342_10003908 Ga0265342_100039089 545
251 3300031712 Ga0265342_10005280 Ga0265342_100052803 545
252 3300031712 Ga0265342_10028404 Ga0265342_100284042 545
253 iso_pu_bacteria 2995392953 2995396203 546
254 iso_pu_bacteria 2599185156 2599335235 547
255 iso_pu_bacteria 2599185236 2599722579 547
256 iso_pu_bacteria 2842922631 2842927141 547
257 3300049570 Ga0501033_0113895 Ga0501033_0113895_70_1740 548
258 3300049580 Ga0501046_0023624 Ga0501046_0023624_717_2387 548
259 3300049581 Ga0501047_0021428 Ga0501047_0021428_1272_2942 548
260 iso_pu_bacteria 2885312484 2885313009 548
261 3300044712 Ga0453684_0211038 Ga0453684_0211038_326_2002 550
262 3300045051 Ga0451576_0034496 Ga0451576_0034496_677_2350 550
263 3300061734 Ga0530510_0034626 Ga0530510_0034626_16_1698 550
264 3300005340 Ga0070689_100011495 Ga0070689_1000114953 551
265 3300006051 Ga0075364_10000018 Ga0075364_100000182 551
266 3300025936 Ga0207670_10008985 Ga0207670_100089855 551
267 3300048924 Ga0496121_0000253 Ga0496121_0000253_14487_16163 551
268 3300049568 Ga0501031_0002885 Ga0501031_0002885_3342_5021 551
269 3300049569 Ga0501032_0047269 Ga0501032_0047269_90_1766 551
270 3300049570 Ga0501033_0005561 Ga0501033_0005561_6194_7870 551
271 3300049570 Ga0501033_0021029 Ga0501033_0021029_3213_4892 551
272 3300049572 Ga0501036_0010610 Ga0501036_0010610_5219_6898 551
273 3300049572 Ga0501036_0052564 Ga0501036_0052564_666_2351 551
274 3300049574 Ga0501038_0015940 Ga0501038_0015940_2561_4240 551
275 3300049575 Ga0501039_0015687 Ga0501039_0015687_1723_3402 551
276 3300049576 Ga0501040_0006139 Ga0501040_0006139_3023_4702 551
277 3300049577 Ga0501041_0001947 Ga0501041_0001947_3693_5372 551
278 3300049578 Ga0501042_0045046 Ga0501042_0045046_515_2200 551
279 3300049579 Ga0501043_0050368 Ga0501043_0050368_967_2652 551
280 3300049580 Ga0501046_0005927 Ga0501046_0005927_3426_5105 551
281 3300049580 Ga0501046_0059815 Ga0501046_0059815_892_2577 551
282 3300049582 Ga0501048_0009603 Ga0501048_0009603_2534_4213 551
283 3300049586 Ga0501070_0022561 Ga0501070_0022561_2388_4067 551
284 3300049587 Ga0501071_0005135 Ga0501071_0005135_2251_3930 551
285 3300049587 Ga0501071_0021219 Ga0501071_0021219_2137_3822 551
286 3300049588 Ga0501072_0000899 Ga0501072_0000899_17576_19255 551
287 3300049590 Ga0501074_0014952 Ga0501074_0014952_3901_5580 551
288 3300049591 Ga0501075_0008590 Ga0501075_0008590_4692_6371 551
289 3300049592 Ga0501076_0012163 Ga0501076_0012163_3674_5353 551
290 3300049592 Ga0501076_0070164 Ga0501076_0070164_575_2260 551
291 3300049593 Ga0501077_0003075 Ga0501077_0003075_5232_6911 551
292 3300049741 Ga0501079_0024052 Ga0501079_0024052_461_2146 551
293 3300049741 Ga0501079_0027740 Ga0501079_0027740_1723_3402 551
294 3300049742 Ga0501080_0001331 Ga0501080_0001331_13541_15220 551
295 3300049743 Ga0501081_0004012 Ga0501081_0004012_1851_3530 551
296 3300049743 Ga0501081_0031314 Ga0501081_0031314_742_2427 551
297 3300049822 Ga0501035_0003546 Ga0501035_0003546_7501_9177 551
298 3300049822 Ga0501035_0016572 Ga0501035_0016572_2436_4115 551
299 3300049823 Ga0501044_0000208 Ga0501044_0000208_11543_13219 551
300 3300049823 Ga0501044_0068736 Ga0501044_0068736_643_2322 551
301 3300049823 Ga0501044_0106462 Ga0501044_0106462_913_2598 551
302 3300049824 Ga0501045_0003533 Ga0501045_0003533_3062_4741 551
303 3300050491 nmdc:mga00v17_36_c1 nmdc:mga00v17_36_c1_52235_53911 551
304 3300054114 Ga0501084_0013317 Ga0501084_0013317_2564_4243 551
305 3300054114 Ga0501084_0021545 Ga0501084_0021545_2390_4075 551
306 3300060353 Ga0501082_0001619 Ga0501082_0001619_6000_7679 551
307 3300061734 Ga0530510_0009440 Ga0530510_0009440_942_2621 551
308 2162886007 SwRhRL2b_contig_3361192 SwRhRL2b_0955.00002190 552
309 3300005289 Ga0065704_10000192 Ga0065704_1000019226 552
310 3300031911 Ga0307412_10001178 Ga0307412_1000117812 552
311 3300032004 Ga0307414_10000914 Ga0307414_100009143 552
312 3300049582 Ga0501048_0074161 Ga0501048_0074161_598_2286 552
313 3300049664 Ga0501224_000015 Ga0501224_000015_24431_26110 552
314 3300049668 Ga0501233_000083 Ga0501233_000083_9478_11157 552
315 3300049669 Ga0501235_004243 Ga0501235_004243_968_2647 552
316 3300049705 Ga0501225_0000038 Ga0501225_0000038_26728_28407 552
317 3300049853 Ga0501226_000027 Ga0501226_000027_64875_66554 552
318 3300054114 Ga0501084_0082428 Ga0501084_0082428_312_2000 552
319 3300054114 Ga0501084_0152786 Ga0501084_0152786_180_1868 552

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03814

KdpA

Potassium-transporting ATPase A subunit

339

612

0.95

PF03814

KdpA

Potassium-transporting ATPase A subunit

1

321

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mrw-assembly2.cif.gz_E structure of the kdpfabc complex 0.9513 3 548
7nnl-assembly1.cif.gz_A cryo-em structure of the kdpfabc complex in an e1-atp conformation loaded with k+ 0.9479 3 548
7nnp-assembly1.cif.gz_A rb-loaded cryo-em structure of the e1-atp kdpfabc complex. 0.9475 3 548
5mrw-assembly2.cif.gz_E structure of the kdpfabc complex 0.9396 3 548
7nnl-assembly1.cif.gz_A cryo-em structure of the kdpfabc complex in an e1-atp conformation loaded with k+ 0.9363 3 548
ID Description Score Start End Superfamily
af_A0A1D6MRU0_306_529_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5444 271 485 1.10.287.70
af_A0A1D6MRU0_306_529_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5116 271 485 1.10.287.70
af_A0A1D6G1L4_252_364_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4928 380 500 1.10.287.70
af_A0A1D6G1L4_252_364_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.462 380 500 1.10.287.70
af_D4AA82_391_633_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3835 93 309 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A259HP66-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9681 1 157 GO:0005886
GO:0008556
AF-A0A1G3KCI5-F1-model_v4 deleted 0.9672 6 552
AF-A0A4Q2Y4W6-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9666 234 552 GO:0005886
GO:0008556
AF-A0A6B0PZ04-F1-model_v4 deleted 0.9664 220 549
AF-A0A544VS95-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9639 326 548 GO:0005886
GO:0008556

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pLDDT pTM Quality
84.55 0.9 High
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Predicted Structure (AlphaFold2)

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