F405064

General Info

Members Datasets Scaffolds Average Seq Length
319 182 638 337

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10124780|Ga0105237_101247803
Length 381
Sequence MIDLSTNYLALRLRTPLVASASPLSHDLDGIRRLEDAGASAIVLYSLFEEQLRRESQELEYHLSAGTESFAESLTYFPARSEFRTGPEAYLCHIEKAKSAVRIPIIASLNGATLGGWTRYARAMEDAGTDAIECNIYSIATDMDVTGVEVEQQYIDIVRAVKSSVSIPVAVKLSPFFSNMAHMAKWMVEAGANGLVLFNRFYQPDIDLQDLEVRPNVLLSTPQALRLPLTWIGILYGRVQASLAATSGVHSAEDVIKLLMAGADVTMLCSSLLRHGIAHLSVIERGLREWMTEHEYESVDQMQGSMSQLRCADPGAFERAQYMRAVKDSAYIERASPQTVDEVGATESGVTNAHICPYLFVIPITTACGAHHGLKSFTGRN

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
65 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
66 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
67 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
101 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
102 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
103 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
104 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
105 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
116 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
118 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
119 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
120 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
121 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
122 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
123 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
124 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
125 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
126 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
127 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
139 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
140 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
141 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
142 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
143 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
144 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
145 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
146 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
147 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
148 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
155 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
156 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
170 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
182 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.43
Metatranscriptomes 1.25
Isolates 0.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.76
Rhizosphere 95.61
Stem 0
Stem Tuber 0
Unclassified 5.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10124780 3300009545 Bacteria 2569
2 rootL2_10205089 3300003322 Unclassified 2542
3 Ga0070683_100020177 3300005329 Bacteria 5929
4 Ga0070670_100033957 3300005331 Bacteria 4392
5 Ga0070670_100065238 3300005331 Bacteria 3124
6 Ga0070680_100131294 3300005336 Bacteria 2096
7 Ga0070660_100027732 3300005339 Bacteria 4229
8 Ga0070661_100020817 3300005344 Bacteria 4680
9 Ga0070661_100121443 3300005344 Bacteria 1957
10 Ga0070692_10026537 3300005345 Bacteria 2864
11 Ga0070671_100000549 3300005355 Bacteria 26554
12 Ga0070671_100040860 3300005355 Bacteria 3854
13 Ga0070659_100027730 3300005366 Bacteria 4366
14 Ga0070709_10001733 3300005434 Bacteria 11860
15 Ga0070709_10027599 3300005434 Bacteria 3377
16 Ga0070709_10224919 3300005434 Unclassified 1340
17 Ga0070714_100075033 3300005435 Bacteria 2934
18 Ga0070714_100165122 3300005435 Unclassified 2006
19 Ga0070714_100286296 3300005435 Bacteria 1532
20 Ga0070713_100010340 3300005436 Bacteria 6740
21 Ga0070713_100051542 3300005436 Bacteria 3403
22 Ga0070713_100140188 3300005436 Bacteria 2141
23 Ga0070713_100209781 3300005436 Bacteria 1763
24 Ga0070713_100266364 3300005436 Unclassified 1567
25 Ga0070710_10013735 3300005437 Bacteria 4063
26 Ga0070710_10086980 3300005437 Bacteria 1836
27 Ga0070711_100033749 3300005439 Bacteria 3409
28 Ga0070711_100081693 3300005439 Unclassified 2304
29 Ga0070711_100309427 3300005439 Bacteria 1259
30 Ga0070694_100000012 3300005444 Bacteria 85073
31 Ga0070663_100047172 3300005455 Bacteria 3052
32 Ga0070678_100388392 3300005456 Bacteria 1209
33 Ga0070681_10003366 3300005458 Bacteria 14947
34 Ga0070681_10200190 3300005458 Bacteria 1915
35 Ga0070681_10224707 3300005458 Bacteria 1792
36 Ga0068867_100063617 3300005459 Bacteria 2742
37 Ga0070706_100006706 3300005467 Bacteria 10868
38 Ga0070706_100049503 3300005467 Bacteria 3878
39 Ga0070706_100369758 3300005467 Bacteria 1336
40 Ga0070706_100376333 3300005467 Bacteria 1323
41 Ga0070707_100008499 3300005468 Bacteria 9537
42 Ga0070707_100062498 3300005468 Bacteria 3572
43 Ga0070698_100005384 3300005471 Bacteria 13993
44 Ga0070699_100008328 3300005518 Bacteria 8988
45 Ga0070699_100015139 3300005518 Bacteria 6625
46 Ga0070679_100256802 3300005530 Bacteria 1703
47 Ga0070684_100403537 3300005535 Bacteria 1260
48 Ga0070697_100000326 3300005536 Bacteria 37671
49 Ga0070697_100001484 3300005536 Bacteria 17845
50 Ga0068853_100029481 3300005539 Bacteria 4627
51 Ga0068855_100062042 3300005563 Bacteria 4365
52 Ga0068855_100190572 3300005563 Bacteria 2313
53 Ga0070664_100001206 3300005564 Bacteria 20595
54 Ga0070664_100010161 3300005564 Bacteria 7633
55 Ga0068857_100000671 3300005577 Bacteria 25375
56 Ga0068854_100007420 3300005578 Bacteria 7002
57 Ga0068856_100000072 3300005614 Bacteria 95094
58 Ga0068856_100001163 3300005614 Bacteria 27651
59 Ga0068856_100007243 3300005614 Bacteria 10822
60 Ga0068856_100014218 3300005614 Bacteria 7694
61 Ga0068856_100020010 3300005614 Bacteria 6497
62 Ga0068859_100004601 3300005617 Bacteria 14073
63 Ga0068859_100232441 3300005617 Bacteria 1932
64 Ga0068864_100044884 3300005618 Bacteria 3790
65 Ga0068864_100046383 3300005618 Bacteria 3728
66 Ga0068851_10009704 3300005834 Bacteria 4482
67 Ga0068863_100138545 3300005841 Bacteria 2325
68 Ga0068858_100003301 3300005842 Bacteria 16061
69 Ga0068860_100042396 3300005843 Bacteria 4347
70 Ga0070717_10010727 3300006028 Bacteria 6934
71 Ga0070717_10011380 3300006028 Bacteria 6753
72 Ga0070717_10012164 3300006028 Bacteria 6561
73 Ga0070717_10049974 3300006028 Bacteria 3435
74 Ga0070717_10072529 3300006028 Bacteria 2875
75 Ga0070717_10131565 3300006028 Bacteria 2152
76 Ga0070717_10165747 3300006028 Bacteria 1919
77 Ga0070717_10269625 3300006028 Bacteria 1508
78 Ga0070716_100097724 3300006173 Bacteria 1793
79 Ga0070716_100112766 3300006173 Bacteria 1688
80 Ga0070712_100000097 3300006175 Bacteria 44184
81 Ga0070712_100001830 3300006175 Bacteria 12959
82 Ga0070712_100178246 3300006175 Bacteria 1654
83 Ga0097621_100008498 3300006237 Bacteria 7394
84 Ga0097621_100014799 3300006237 Bacteria 5849
85 Ga0097621_100037367 3300006237 Unclassified 3890
86 Ga0097621_100162714 3300006237 Bacteria 1919
87 Ga0097621_100393171 3300006237 Bacteria 1240
88 Ga0068871_100000541 3300006358 Bacteria 25763
89 Ga0068871_100074669 3300006358 Bacteria 2797
90 Ga0075431_100113056 3300006847 Bacteria 2802
91 Ga0075433_10054956 3300006852 Bacteria 3474
92 Ga0075429_100145597 3300006880 Bacteria 2074
93 Ga0097620_100004601 3300006931 Bacteria 14073
94 Ga0097620_100232456 3300006931 Bacteria 1932
95 Ga0075435_100284768 3300007076 Bacteria 1411
96 Ga0105240_10031772 3300009093 Bacteria 6840
97 Ga0105240_10063044 3300009093 Bacteria 4613
98 Ga0105240_10102608 3300009093 Bacteria 3476
99 Ga0111539_10266056 3300009094 Bacteria 1996
100 Ga0114129_10037707 3300009147 Bacteria 6823
101 Ga0105241_10009362 3300009174 Bacteria 7199
102 Ga0105241_10095827 3300009174 Bacteria 2350
103 Ga0105248_10103166 3300009177 Bacteria 3214
104 Ga0105237_10009384 3300009545 Bacteria 10480
105 Ga0105238_10015832 3300009551 Bacteria 7635
106 Ga0105239_10020109 3300010375 Bacteria 7365
107 Ga0157373_10001586 3300013100 Bacteria 17362
108 Ga0157373_10024487 3300013100 Bacteria 4371
109 Ga0157371_10108241 3300013102 Bacteria 1972
110 Ga0157369_10016658 3300013105 Bacteria 8263
111 Ga0157374_10000655 3300013296 Bacteria 30453
112 Ga0157374_10023871 3300013296 Bacteria 5477
113 Ga0157378_10013763 3300013297 Bacteria 7076
114 Ga0157378_10042867 3300013297 Bacteria 4017
115 Ga0157378_10045099 3300013297 Bacteria 3917
116 Ga0163162_10350097 3300013306 Bacteria 1610
117 Ga0157372_10017915 3300013307 Bacteria 7611
118 Ga0157372_10069657 3300013307 Bacteria 3956
119 Ga0157372_10070883 3300013307 Bacteria 3923
120 Ga0157372_10101047 3300013307 Bacteria 3292
121 Ga0157372_10639759 3300013307 Bacteria 1239
122 Ga0182008_10007245 3300014497 Bacteria 6132
123 Ga0182007_10003090 3300015262 Bacteria 8016
124 Ga0182007_10050085 3300015262 Bacteria 1379
125 Ga0182005_1008625 3300015265 Bacteria 2997
126 Ga0207692_10033557 3300025898 Bacteria 2477
127 Ga0207692_10195971 3300025898 Unclassified 1185
128 Ga0207699_10000877 3300025906 Bacteria 14352
129 Ga0207699_10043394 3300025906 Bacteria 2612
130 Ga0207699_10107321 3300025906 Bacteria 1784
131 Ga0207684_10002897 3300025910 Bacteria 17008
132 Ga0207684_10040078 3300025910 Bacteria 3971
133 Ga0207654_10006313 3300025911 Bacteria 5959
134 Ga0207654_10055441 3300025911 Bacteria 2295
135 Ga0207707_10006456 3300025912 Bacteria 10239
136 Ga0207707_10020168 3300025912 Bacteria 5819
137 Ga0207707_10195502 3300025912 Bacteria 1764
138 Ga0207695_10102116 3300025913 Bacteria 2861
139 Ga0207671_10023505 3300025914 Bacteria 4649
140 Ga0207693_10000061 3300025915 Bacteria 92703
141 Ga0207693_10010667 3300025915 Bacteria 7457
142 Ga0207693_10187881 3300025915 Bacteria 1626
143 Ga0207663_10018451 3300025916 Bacteria 3910
144 Ga0207663_10040341 3300025916 Bacteria 2837
145 Ga0207663_10099923 3300025916 Bacteria 1946
146 Ga0207660_10108491 3300025917 Bacteria 2085
147 Ga0207657_10001036 3300025919 Bacteria 29402
148 Ga0207649_10013257 3300025920 Bacteria 4597
149 Ga0207649_10091442 3300025920 Bacteria 1993
150 Ga0207646_10010816 3300025922 Bacteria 8869
151 Ga0207646_10041863 3300025922 Bacteria 4116
152 Ga0207681_10051594 3300025923 Bacteria 2787
153 Ga0207650_10053154 3300025925 Bacteria 3002
154 Ga0207650_10253860 3300025925 Bacteria 1424
155 Ga0207700_10000201 3300025928 Bacteria 35738
156 Ga0207700_10030953 3300025928 Bacteria 3796
157 Ga0207700_10117829 3300025928 Bacteria 2148
158 Ga0207700_10130883 3300025928 Unclassified 2048
159 Ga0207664_10000231 3300025929 Bacteria 42325
160 Ga0207664_10075868 3300025929 Bacteria 2719
161 Ga0207664_10330130 3300025929 Unclassified 1347
162 Ga0207644_10000639 3300025931 Bacteria 22212
163 Ga0207644_10051731 3300025931 Bacteria 2950
164 Ga0207690_10043977 3300025932 Bacteria 2942
165 Ga0207665_10018400 3300025939 Bacteria 4590
166 Ga0207665_10173941 3300025939 Bacteria 1556
167 Ga0207711_10120232 3300025941 Bacteria 2344
168 Ga0207661_10040978 3300025944 Bacteria 3644
169 Ga0207679_10003201 3300025945 Bacteria 10096
170 Ga0207679_10215257 3300025945 Bacteria 1613
171 Ga0207667_10044606 3300025949 Bacteria 4697
172 Ga0207667_10160684 3300025949 Bacteria 2311
173 Ga0207703_10003181 3300026035 Bacteria 13818
174 Ga0207703_10128149 3300026035 Bacteria 2188
175 Ga0207639_10214996 3300026041 Bacteria 1657
176 Ga0207678_10151665 3300026067 Bacteria 1979
177 Ga0207702_10000436 3300026078 Bacteria 47578
178 Ga0207702_10007169 3300026078 Bacteria 9540
179 Ga0207702_10020028 3300026078 Bacteria 5544
180 Ga0207702_10172936 3300026078 Bacteria 1982
181 Ga0207641_10056038 3300026088 Bacteria 3349
182 Ga0207641_10099409 3300026088 Bacteria 2560
183 Ga0207641_10238026 3300026088 Bacteria 1695
184 Ga0207648_10048575 3300026089 Unclassified 3714
185 Ga0207676_10038435 3300026095 Bacteria 3653
186 Ga0207674_10000615 3300026116 Bacteria 46774
187 Ga0207683_10424595 3300026121 Bacteria 1224
188 Ga0265354_1003228 3300028016 Bacteria 1853
189 Ga0265356_1002106 3300028017 Bacteria 2731
190 Ga0265355_1000630 3300028036 Bacteria 1958
191 Ga0265337_1005378 3300028556 Bacteria 5092
192 Ga0265323_10014472 3300028653 Bacteria 3124
193 Ga0265323_10023559 3300028653 Bacteria 2346
194 Ga0265336_10000476 3300028666 Bacteria 23747
195 Ga0265338_10000243 3300028800 Bacteria 100885
196 Ga0265338_10000633 3300028800 Bacteria 61054
197 Ga0265338_10001262 3300028800 Bacteria 41722
198 Ga0265338_10003275 3300028800 Bacteria 22994
199 Ga0265338_10006989 3300028800 Bacteria 14178
200 Ga0265762_1001617 3300030760 Bacteria 4105
201 Ga0265760_10000863 3300031090 Bacteria 8772
202 Ga0265760_10001077 3300031090 Bacteria 7919
203 Ga0265332_10019769 3300031238 Bacteria 2973
204 Ga0265325_10036880 3300031241 Bacteria 2588
205 Ga0265325_10081514 3300031241 Bacteria 1608
206 Ga0265339_10003689 3300031249 Bacteria 10684
207 Ga0265339_10035895 3300031249 Bacteria 2777
208 Ga0265339_10058405 3300031249 Bacteria 2083
209 Ga0265327_10007116 3300031251 Bacteria 8735
210 Ga0265316_10027148 3300031344 Bacteria 4747
211 Ga0265316_10054770 3300031344 Unclassified 3122
212 Ga0265316_10081459 3300031344 Bacteria 2481
213 Ga0265314_10148342 3300031711 Bacteria 1441
214 Ga0265342_10018247 3300031712 Bacteria 4550
215 Ga0316596_1015564 3300033541 Bacteria 1897
216 Ga0373944_0001451 3300035089 Bacteria 5985
217 Ga0373945_0005908 3300035116 Bacteria 3930
218 Ga0373956_0034158 3300035119 Bacteria 2239
219 Ga0373957_0019609 3300035120 Bacteria 2382
220 Ga0373943_0000056 3300035170 Bacteria 38613
221 Ga0373943_0032736 3300035170 Bacteria 2473
222 Ga0373943_0118443 3300035170 Bacteria 1405
223 Ga0373946_0022357 3300035171 Bacteria 2460
224 Ga0316574_0002101 3300035398 Bacteria 9874
225 Ga0316574_0266468 3300035398 Bacteria 1093
226 Ga0373924_0118718 3300035410 Bacteria 1146
227 Ga0373935_0167013 3300035692 Unclassified 1503
228 Ga0373927_0006993 3300035695 Bacteria 7657
229 Ga0373933_0041362 3300035724 Bacteria 2720
230 Ga0373933_0042196 3300035724 Unclassified 2696
231 Ga0373947_0006267 3300035725 Bacteria 6914
232 Ga0373947_0066015 3300035725 Bacteria 2208
233 Ga0373937_0041661 3300036401 Bacteria 4188
234 Ga0373937_0074650 3300036401 Unclassified 3129
235 Ga0373937_0188812 3300036401 Bacteria 1936
236 Ga0373925_0000866 3300037068 Bacteria 27705
237 Ga0373925_0081007 3300037068 Bacteria 2468
238 Ga0395901_0554065 3300038443 Bacteria 1165
239 Ga0436360_1148123 3300039438 Bacteria 3945
240 Ga0436361_0596656 3300039447 Bacteria 1491
241 Ga0451577_0000311 3300042876 Bacteria 93198
242 Ga0451577_0000612 3300042876 Bacteria 57520
243 Ga0451577_0002271 3300042876 Bacteria 23248
244 Ga0451577_0019620 3300042876 Bacteria 6215
245 Ga0451577_0025888 3300042876 Bacteria 5319
246 Ga0451577_0067361 3300042876 Bacteria 3193
247 Ga0451577_0132043 3300042876 Bacteria 2241
248 Ga0453683_0000045 3300044673 Bacteria 211088
249 Ga0453683_0001402 3300044673 Bacteria 20945
250 Ga0453683_0027741 3300044673 Bacteria 3588
251 Ga0453684_0000051 3300044712 Bacteria 551033
252 Ga0453684_0000226 3300044712 Bacteria 244912
253 Ga0453684_0000739 3300044712 Bacteria 114375
254 Ga0453684_0000846 3300044712 Bacteria 103225
255 Ga0453684_0019429 3300044712 Bacteria 10348
256 Ga0453684_0029371 3300044712 Bacteria 7808
257 Ga0453684_0052140 3300044712 Bacteria 5354
258 Ga0453684_0083704 3300044712 Unclassified 3970
259 Ga0453684_0121292 3300044712 Bacteria 3155
260 Ga0453684_0201546 3300044712 Bacteria 2319
261 Ga0453684_0307641 3300044712 Bacteria 1800
262 Ga0451576_0000175 3300045051 Bacteria 161976
263 Ga0451576_0002502 3300045051 Bacteria 27274
264 Ga0451576_0037751 3300045051 Bacteria 5115
265 Ga0451576_0060276 3300045051 Bacteria 3959
266 Ga0451576_0089332 3300045051 Bacteria 3205
267 Ga0495629_0017330 3300046459 Bacteria 5165
268 Ga0495653_0052088 3300046463 Bacteria 3139
269 Ga0495580_0000724 3300046472 Bacteria 28249
270 Ga0495580_0012739 3300046472 Bacteria 6446
271 Ga0495580_0063046 3300046472 Bacteria 2600
272 Ga0495580_0169236 3300046472 Bacteria 1511
273 Ga0495582_0006733 3300046473 Bacteria 6391
274 Ga0495608_0108746 3300046511 Bacteria 1783
275 Ga0495628_0001670 3300046516 Bacteria 20249
276 Ga0495630_0000209 3300046517 Bacteria 46248
277 Ga0495666_0013002 3300046526 Bacteria 4149
278 Ga0495640_0024779 3300046533 Bacteria 4360
279 Ga0495586_0000061 3300046535 Bacteria 65869
280 Ga0495634_0009587 3300046642 Bacteria 7136
281 Ga0495613_0038630 3300046689 Bacteria 3538
282 Ga0495624_0056113 3300046690 Bacteria 2479
283 Ga0495581_0121061 3300047315 Bacteria 1523
284 Ga0495674_0000613 3300047319 Bacteria 33475
285 Ga0495674_0026539 3300047319 Bacteria 5299
286 Ga0495674_0354203 3300047319 Bacteria 1191
287 Ga0495676_0005321 3300047321 Bacteria 11786
288 Ga0495684_0015453 3300047471 Bacteria 5874
289 Ga0495602_0100942 3300048088 Unclassified 2368
290 Ga0495602_0136019 3300048088 Bacteria 1952
291 Ga0496101_0048061 3300048904 Bacteria 3065
292 Ga0496102_0035082 3300048905 Bacteria 4514
293 Ga0496104_0099953 3300048907 Bacteria 2777
294 Ga0496104_0259064 3300048907 Unclassified 1652
295 Ga0496107_0050761 3300048910 Bacteria 2991
296 Ga0496108_0014884 3300048911 Bacteria 6347
297 Ga0496109_0041756 3300048912 Bacteria 4154
298 Ga0496110_0026070 3300048913 Bacteria 4998
299 Ga0496111_0014814 3300048914 Bacteria 5337
300 Ga0496112_0014565 3300048915 Bacteria 7305
301 Ga0496112_0176307 3300048915 Bacteria 2102
302 Ga0496113_0074529 3300048916 Bacteria 2587
303 Ga0501036_0320745 3300049572 Bacteria 1295
304 Ga0501039_0174499 3300049575 Bacteria 1690
305 Ga0501042_0103400 3300049578 Bacteria 2049
306 Ga0501071_0011226 3300049587 Bacteria 6027
307 Ga0501072_0222718 3300049588 Bacteria 1503
308 Ga0501075_0013429 3300049591 Bacteria 5843
309 Ga0501076_0078273 3300049592 Bacteria 2653
310 Ga0501079_0026692 3300049741 Bacteria 4429
311 nmdc:mga05p37_440725_c1 3300050507 Bacteria 1511
312 nmdc:mga09592_98153_c1 3300050508 Bacteria 2507
313 nmdc:mga06r32_147979_c1 3300050510 Bacteria 2326
314 nmdc:mga08y16_389832_c1 3300050511 Bacteria 1427
315 nmdc:mga0n895_231846_c1 3300050512 Bacteria 1874
316 nmdc:mga0a205_14694_c1 3300050515 Bacteria 7304
317 Ga0501084_0110739 3300054114 Bacteria 2307
318 Ga0530510_0152587 3300061734 Bacteria 1706
319 2913919386 2913912277 Bacteria 9037797
320 Ga0105237_10124780
321 rootL2_10205089
322 Ga0070683_100020177
323 Ga0070670_100033957
324 Ga0070670_100065238
325 Ga0070680_100131294
326 Ga0070660_100027732
327 Ga0070661_100020817
328 Ga0070661_100121443
329 Ga0070692_10026537
330 Ga0070671_100000549
331 Ga0070671_100040860
332 Ga0070659_100027730
333 Ga0070709_10001733
334 Ga0070709_10027599
335 Ga0070709_10224919
336 Ga0070714_100075033
337 Ga0070714_100165122
338 Ga0070714_100286296
339 Ga0070713_100010340
340 Ga0070713_100051542
341 Ga0070713_100140188
342 Ga0070713_100209781
343 Ga0070713_100266364
344 Ga0070710_10013735
345 Ga0070710_10086980
346 Ga0070711_100033749
347 Ga0070711_100081693
348 Ga0070711_100309427
349 Ga0070694_100000012
350 Ga0070663_100047172
351 Ga0070678_100388392
352 Ga0070681_10003366
353 Ga0070681_10200190
354 Ga0070681_10224707
355 Ga0068867_100063617
356 Ga0070706_100006706
357 Ga0070706_100049503
358 Ga0070706_100369758
359 Ga0070706_100376333
360 Ga0070707_100008499
361 Ga0070707_100062498
362 Ga0070698_100005384
363 Ga0070699_100008328
364 Ga0070699_100015139
365 Ga0070679_100256802
366 Ga0070684_100403537
367 Ga0070697_100000326
368 Ga0070697_100001484
369 Ga0068853_100029481
370 Ga0068855_100062042
371 Ga0068855_100190572
372 Ga0070664_100001206
373 Ga0070664_100010161
374 Ga0068857_100000671
375 Ga0068854_100007420
376 Ga0068856_100000072
377 Ga0068856_100001163
378 Ga0068856_100007243
379 Ga0068856_100014218
380 Ga0068856_100020010
381 Ga0068859_100004601
382 Ga0068859_100232441
383 Ga0068864_100044884
384 Ga0068864_100046383
385 Ga0068851_10009704
386 Ga0068863_100138545
387 Ga0068858_100003301
388 Ga0068860_100042396
389 Ga0070717_10010727
390 Ga0070717_10011380
391 Ga0070717_10012164
392 Ga0070717_10049974
393 Ga0070717_10072529
394 Ga0070717_10131565
395 Ga0070717_10165747
396 Ga0070717_10269625
397 Ga0070716_100097724
398 Ga0070716_100112766
399 Ga0070712_100000097
400 Ga0070712_100001830
401 Ga0070712_100178246
402 Ga0097621_100008498
403 Ga0097621_100014799
404 Ga0097621_100037367
405 Ga0097621_100162714
406 Ga0097621_100393171
407 Ga0068871_100000541
408 Ga0068871_100074669
409 Ga0075431_100113056
410 Ga0075433_10054956
411 Ga0075429_100145597
412 Ga0097620_100004601
413 Ga0097620_100232456
414 Ga0075435_100284768
415 Ga0105240_10031772
416 Ga0105240_10063044
417 Ga0105240_10102608
418 Ga0111539_10266056
419 Ga0114129_10037707
420 Ga0105241_10009362
421 Ga0105241_10095827
422 Ga0105248_10103166
423 Ga0105237_10009384
424 Ga0105238_10015832
425 Ga0105239_10020109
426 Ga0157373_10001586
427 Ga0157373_10024487
428 Ga0157371_10108241
429 Ga0157369_10016658
430 Ga0157374_10000655
431 Ga0157374_10023871
432 Ga0157378_10013763
433 Ga0157378_10042867
434 Ga0157378_10045099
435 Ga0163162_10350097
436 Ga0157372_10017915
437 Ga0157372_10069657
438 Ga0157372_10070883
439 Ga0157372_10101047
440 Ga0157372_10639759
441 Ga0182008_10007245
442 Ga0182007_10003090
443 Ga0182007_10050085
444 Ga0182005_1008625
445 Ga0207692_10033557
446 Ga0207692_10195971
447 Ga0207699_10000877
448 Ga0207699_10043394
449 Ga0207699_10107321
450 Ga0207684_10002897
451 Ga0207684_10040078
452 Ga0207654_10006313
453 Ga0207654_10055441
454 Ga0207707_10006456
455 Ga0207707_10020168
456 Ga0207707_10195502
457 Ga0207695_10102116
458 Ga0207671_10023505
459 Ga0207693_10000061
460 Ga0207693_10010667
461 Ga0207693_10187881
462 Ga0207663_10018451
463 Ga0207663_10040341
464 Ga0207663_10099923
465 Ga0207660_10108491
466 Ga0207657_10001036
467 Ga0207649_10013257
468 Ga0207649_10091442
469 Ga0207646_10010816
470 Ga0207646_10041863
471 Ga0207681_10051594
472 Ga0207650_10053154
473 Ga0207650_10253860
474 Ga0207700_10000201
475 Ga0207700_10030953
476 Ga0207700_10117829
477 Ga0207700_10130883
478 Ga0207664_10000231
479 Ga0207664_10075868
480 Ga0207664_10330130
481 Ga0207644_10000639
482 Ga0207644_10051731
483 Ga0207690_10043977
484 Ga0207665_10018400
485 Ga0207665_10173941
486 Ga0207711_10120232
487 Ga0207661_10040978
488 Ga0207679_10003201
489 Ga0207679_10215257
490 Ga0207667_10044606
491 Ga0207667_10160684
492 Ga0207703_10003181
493 Ga0207703_10128149
494 Ga0207639_10214996
495 Ga0207678_10151665
496 Ga0207702_10000436
497 Ga0207702_10007169
498 Ga0207702_10020028
499 Ga0207702_10172936
500 Ga0207641_10056038
501 Ga0207641_10099409
502 Ga0207641_10238026
503 Ga0207648_10048575
504 Ga0207676_10038435
505 Ga0207674_10000615
506 Ga0207683_10424595
507 Ga0265354_1003228
508 Ga0265356_1002106
509 Ga0265355_1000630
510 Ga0265337_1005378
511 Ga0265323_10014472
512 Ga0265323_10023559
513 Ga0265336_10000476
514 Ga0265338_10000243
515 Ga0265338_10000633
516 Ga0265338_10001262
517 Ga0265338_10003275
518 Ga0265338_10006989
519 Ga0265762_1001617
520 Ga0265760_10000863
521 Ga0265760_10001077
522 Ga0265332_10019769
523 Ga0265325_10036880
524 Ga0265325_10081514
525 Ga0265339_10003689
526 Ga0265339_10035895
527 Ga0265339_10058405
528 Ga0265327_10007116
529 Ga0265316_10027148
530 Ga0265316_10054770
531 Ga0265316_10081459
532 Ga0265314_10148342
533 Ga0265342_10018247
534 Ga0316596_1015564
535 Ga0373944_0001451
536 Ga0373945_0005908
537 Ga0373956_0034158
538 Ga0373957_0019609
539 Ga0373943_0000056
540 Ga0373943_0032736
541 Ga0373943_0118443
542 Ga0373946_0022357
543 Ga0316574_0002101
544 Ga0316574_0266468
545 Ga0373924_0118718
546 Ga0373935_0167013
547 Ga0373927_0006993
548 Ga0373933_0041362
549 Ga0373933_0042196
550 Ga0373947_0006267
551 Ga0373947_0066015
552 Ga0373937_0041661
553 Ga0373937_0074650
554 Ga0373937_0188812
555 Ga0373925_0000866
556 Ga0373925_0081007
557 Ga0395901_0554065
558 Ga0436360_1148123
559 Ga0436361_0596656
560 Ga0451577_0000311
561 Ga0451577_0000612
562 Ga0451577_0002271
563 Ga0451577_0019620
564 Ga0451577_0025888
565 Ga0451577_0067361
566 Ga0451577_0132043
567 Ga0453683_0000045
568 Ga0453683_0001402
569 Ga0453683_0027741
570 Ga0453684_0000051
571 Ga0453684_0000226
572 Ga0453684_0000739
573 Ga0453684_0000846
574 Ga0453684_0019429
575 Ga0453684_0029371
576 Ga0453684_0052140
577 Ga0453684_0083704
578 Ga0453684_0121292
579 Ga0453684_0201546
580 Ga0453684_0307641
581 Ga0451576_0000175
582 Ga0451576_0002502
583 Ga0451576_0037751
584 Ga0451576_0060276
585 Ga0451576_0089332
586 Ga0495629_0017330
587 Ga0495653_0052088
588 Ga0495580_0000724
589 Ga0495580_0012739
590 Ga0495580_0063046
591 Ga0495580_0169236
592 Ga0495582_0006733
593 Ga0495608_0108746
594 Ga0495628_0001670
595 Ga0495630_0000209
596 Ga0495666_0013002
597 Ga0495640_0024779
598 Ga0495586_0000061
599 Ga0495634_0009587
600 Ga0495613_0038630
601 Ga0495624_0056113
602 Ga0495581_0121061
603 Ga0495674_0000613
604 Ga0495674_0026539
605 Ga0495674_0354203
606 Ga0495676_0005321
607 Ga0495684_0015453
608 Ga0495602_0100942
609 Ga0495602_0136019
610 Ga0496101_0048061
611 Ga0496102_0035082
612 Ga0496104_0099953
613 Ga0496104_0259064
614 Ga0496107_0050761
615 Ga0496108_0014884
616 Ga0496109_0041756
617 Ga0496110_0026070
618 Ga0496111_0014814
619 Ga0496112_0014565
620 Ga0496112_0176307
621 Ga0496113_0074529
622 Ga0501036_0320745
623 Ga0501039_0174499
624 Ga0501042_0103400
625 Ga0501071_0011226
626 Ga0501072_0222718
627 Ga0501075_0013429
628 Ga0501076_0078273
629 Ga0501079_0026692
630 nmdc:mga05p37_440725_c1
631 nmdc:mga09592_98153_c1
632 nmdc:mga06r32_147979_c1
633 nmdc:mga08y16_389832_c1
634 nmdc:mga0n895_231846_c1
635 nmdc:mga0a205_14694_c1
636 Ga0501084_0110739
637 Ga0530510_0152587
638 2913919386

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01180

DHO_dh

Dihydroorotate dehydrogenase

84

291

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ljs-assembly2.cif.gz_D porcine dihydropyrimidine dehydrogenase (dpd) complexed with 5-ethynyluracil (5eu) - open form 0.7876 2 282
4my8-assembly2.cif.gz_C-3 crystal structure of the inosine 5'-monophosphate dehydrogenase with an internal deletion of the cbs domain from bacillus anthracis str. ames complexed with inhibitor q21 0.7829 2 269
4myx-assembly1.cif.gz_D crystal structure of the inosine 5'-monophosphate dehydrogenase, with a internal deletion of cbs domain from bacillus anthracis str. ame complexed with p32 0.7824 2 268
8f6n-assembly1.cif.gz_A dihydropyrimidine dehydrogenase (dpd) c671s mutant soaked with thymine quasi-anaerobically 0.7814 1 282
8f61-assembly2.cif.gz_D dihydropyrimidine dehydrogenase (dpd) c671s mutant soaked with dihydrothymine quasi-anaerobically 0.7795 1 291
ID Description Score Start End Superfamily
3c61A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8086 1 304 3.20.20.70
af_Q58070_5_305_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.795 3 303 3.20.20.70
3c61A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7891 1 304 3.20.20.70
af_Q58070_5_305_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7826 3 303 3.20.20.70
af_I1KJ84_49_366_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7575 3 296 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A539DUV3-F1-model_v4 Dihydroorotate dehydrogenase (Fumarate) 0.9764 105 329 GO:0004152
GO:0005737
GO:0006207
GO:0006221
AF-A0A662CPQ3-F1-model_v4 Dihydroorotate dehydrogenase 0.969 85 325 GO:0004152
GO:0005737
GO:0006207
GO:0044205
AF-A0A539DUV3-F1-model_v4 Dihydroorotate dehydrogenase (Fumarate) 0.9679 105 329 GO:0004152
GO:0005737
GO:0006207
GO:0006221
AF-A0A350V0Z1-F1-model_v4 Dihydroorotate dehydrogenase-like protein 0.9646 99 248
AF-A0A849RY34-F1-model_v4 Dihydroorotate dehydrogenase-like protein 0.9639 1 295 GO:0004152
GO:0005737
GO:0006207
GO:0044205

Map