F404925

General Info

Members Datasets Scaffolds Average Seq Length
319 184 638 222

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10073795|Ga0070658_100737951
Length 250
Sequence VATAATGRAGNGSAPDEPGGDPAQTDATLTHSDNAAAKASNGAPARGSRLPRSARRKQLMAAAQEVFVANGYHAAAMDDIADRAGVSKPVLYQHFPGKLELYLALLDVHTTELVGAVRSAMAATTDNAQRVHNAVSAYFDFVDGESADVQGAFRLVFETDLRNEPAVRDRIAGVSRRCMQAVADTIAADTGLPRAQVELLAATVTGTSEVAARWWLESERALPKAEAVRLIEGLVWRGISNFPLVGDEDR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
125 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
131 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
132 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
133 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
134 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
135 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
136 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
137 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
138 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
139 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
140 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
141 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
142 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
143 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
144 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
154 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
155 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
160 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
161 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
162 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
163 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
164 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
165 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
177 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
178 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
179 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
180 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
181 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
182 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
183 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
184 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.73
Metatranscriptomes 3.76
Isolates 2.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 6.58
Rhizosphere 88.4
Stem 0
Stem Tuber 0
Unclassified 0.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10073795 3300005327 Bacteria 2798
2 Ga0070658_10426476 3300005327 Bacteria 1141
3 Ga0070658_10553511 3300005327 Bacteria 996
4 Ga0070683_100506300 3300005329 Bacteria 1154
5 Ga0070670_100034684 3300005331 Bacteria 4342
6 Ga0068869_100069418 3300005334 Bacteria 2605
7 Ga0070680_100142066 3300005336 Bacteria 2013
8 Ga0070680_100316444 3300005336 Bacteria 1325
9 Ga0070682_100001891 3300005337 Bacteria 11699
10 Ga0068868_100022445 3300005338 Bacteria 4762
11 Ga0070660_100120711 3300005339 Bacteria 2091
12 Ga0070691_10006643 3300005341 Bacteria 5294
13 Ga0070675_100010743 3300005354 Bacteria 7161
14 Ga0070671_100001223 3300005355 Bacteria 19238
15 Ga0070659_100068509 3300005366 Bacteria 2815
16 Ga0070667_100290090 3300005367 Bacteria 1471
17 Ga0070714_100098206 3300005435 Bacteria 2576
18 Ga0070713_100004818 3300005436 Bacteria 9137
19 Ga0070713_100046596 3300005436 Bacteria 3558
20 Ga0070710_10000058 3300005437 Bacteria 50570
21 Ga0070711_100041999 3300005439 Bacteria 3090
22 Ga0070663_100030725 3300005455 Bacteria 3685
23 Ga0070663_100030864 3300005455 Bacteria 3677
24 Ga0070678_100002763 3300005456 Bacteria 9697
25 Ga0070662_100171081 3300005457 Bacteria 1706
26 Ga0070681_10021293 3300005458 Bacteria 6498
27 Ga0070679_100048003 3300005530 Bacteria 4255
28 Ga0070679_100078843 3300005530 Bacteria 3283
29 Ga0070679_100320069 3300005530 Bacteria 1500
30 Ga0070679_100345462 3300005530 Bacteria 1436
31 Ga0070684_100501914 3300005535 Bacteria 1124
32 Ga0070693_100013115 3300005547 Bacteria 4213
33 Ga0070665_100032535 3300005548 Bacteria 5249
34 Ga0068855_100088999 3300005563 Bacteria 3565
35 Ga0070664_100032469 3300005564 Bacteria 4368
36 Ga0068854_100075143 3300005578 Bacteria 2480
37 Ga0068856_100978719 3300005614 Bacteria 864
38 Ga0070702_100001367 3300005615 Bacteria 9952
39 Ga0068852_100024759 3300005616 Bacteria 4855
40 Ga0068859_100007784 3300005617 Bacteria 10878
41 Ga0068859_100044043 3300005617 Bacteria 4485
42 Ga0068864_100006507 3300005618 Bacteria 9574
43 Ga0068861_100351091 3300005719 Bacteria 1294
44 Ga0068870_10032178 3300005840 Bacteria 2663
45 Ga0068863_100371585 3300005841 Bacteria 1395
46 Ga0068863_100594926 3300005841 Bacteria 1094
47 Ga0081455_10003960 3300005937 Bacteria 16815
48 Ga0081455_10004407 3300005937 Bacteria 15817
49 Ga0081455_10009663 3300005937 Bacteria 9895
50 Ga0081455_10018370 3300005937 Bacteria 6664
51 Ga0081455_10033348 3300005937 Bacteria 4628
52 Ga0081455_10036350 3300005937 Bacteria 4386
53 Ga0070717_10061916 3300006028 Bacteria 3102
54 Ga0070717_10275950 3300006028 Bacteria 1490
55 Ga0075432_10018125 3300006058 Bacteria 2401
56 Ga0068871_100008265 3300006358 Bacteria 7483
57 Ga0075428_100363382 3300006844 Bacteria 1552
58 Ga0075433_10011087 3300006852 Bacteria 7250
59 Ga0075434_100006035 3300006871 Bacteria 11081
60 Ga0075436_100196138 3300006914 Bacteria 1429
61 Ga0097620_100007784 3300006931 Bacteria 10878
62 Ga0097620_100044047 3300006931 Bacteria 4485
63 Ga0075435_100004395 3300007076 Bacteria 9674
64 Ga0105251_10050636 3300009011 Bacteria 1983
65 Ga0105240_10076466 3300009093 Bacteria 4127
66 Ga0105240_10576375 3300009093 Bacteria 1242
67 Ga0111539_10008646 3300009094 Bacteria 12924
68 Ga0105245_10492474 3300009098 Bacteria 1241
69 Ga0105247_10005205 3300009101 Bacteria 8223
70 Ga0114129_10398085 3300009147 Bacteria 1815
71 Ga0105243_10813362 3300009148 Bacteria 922
72 Ga0105241_10022853 3300009174 Bacteria 4635
73 Ga0105248_10042082 3300009177 Bacteria 5123
74 Ga0105237_10051607 3300009545 Bacteria 4131
75 Ga0105237_10111024 3300009545 Bacteria 2733
76 Ga0105238_10158090 3300009551 Bacteria 2242
77 Ga0105239_10097385 3300010375 Bacteria 3251
78 Ga0105239_10130176 3300010375 Bacteria 2798
79 Ga0105239_10218555 3300010375 Bacteria 2137
80 Ga0105246_10009154 3300011119 Bacteria 6097
81 Ga0157371_10067652 3300013102 Bacteria 2528
82 Ga0157370_10018442 3300013104 Bacteria 7017
83 Ga0157370_11042492 3300013104 Bacteria 740
84 Ga0157369_10578686 3300013105 Bacteria 1160
85 Ga0157369_10694255 3300013105 Bacteria 1048
86 Ga0157369_10723955 3300013105 Bacteria 1024
87 Ga0157374_10027775 3300013296 Bacteria 5109
88 Ga0157372_10566219 3300013307 Bacteria 1324
89 Ga0157372_11137604 3300013307 Bacteria 903
90 Ga0157377_10008494 3300014745 Bacteria 5011
91 Ga0197907_11055830 3300020069 Bacteria 1287
92 Ga0206349_1825419 3300020075 Bacteria 1047
93 Ga0206354_10240716 3300020081 Bacteria 3599
94 Ga0206354_10682268 3300020081 Bacteria 915
95 Ga0206353_10272373 3300020082 Bacteria 1314
96 Ga0206353_10300663 3300020082 Bacteria 903
97 Ga0206353_10426218 3300020082 Bacteria 1852
98 Ga0206353_10488922 3300020082 Bacteria 4624
99 Ga0213875_10005808 3300021388 Bacteria 6566
100 Ga0224712_10064650 3300022467 Bacteria 1468
101 Ga0207656_10040047 3300025321 Bacteria 1985
102 Ga0207692_10002544 3300025898 Bacteria 7005
103 Ga0207710_10018332 3300025900 Bacteria 2976
104 Ga0207688_10089034 3300025901 Bacteria 1770
105 Ga0207699_10022574 3300025906 Bacteria 3413
106 Ga0207645_10018026 3300025907 Bacteria 4653
107 Ga0207705_10010783 3300025909 Bacteria 6634
108 Ga0207705_10267082 3300025909 Bacteria 1308
109 Ga0207707_10024496 3300025912 Bacteria 5281
110 Ga0207707_10744052 3300025912 Bacteria 820
111 Ga0207663_10140015 3300025916 Bacteria 1684
112 Ga0207660_10019462 3300025917 Bacteria 4538
113 Ga0207660_10078522 3300025917 Bacteria 2419
114 Ga0207660_10275507 3300025917 Bacteria 1334
115 Ga0207657_10061085 3300025919 Bacteria 3233
116 Ga0207657_10155777 3300025919 Bacteria 1858
117 Ga0207649_10189148 3300025920 Bacteria 1446
118 Ga0207652_10023841 3300025921 Bacteria 5074
119 Ga0207652_10047486 3300025921 Bacteria 3667
120 Ga0207652_10143357 3300025921 Bacteria 2137
121 Ga0207652_10253394 3300025921 Bacteria 1587
122 Ga0207652_10267785 3300025921 Bacteria 1541
123 Ga0207694_10132851 3300025924 Bacteria 1996
124 Ga0207650_10004545 3300025925 Bacteria 9490
125 Ga0207659_10022787 3300025926 Bacteria 4173
126 Ga0207687_10087464 3300025927 Bacteria 2265
127 Ga0207700_10061115 3300025928 Bacteria 2856
128 Ga0207700_10067454 3300025928 Bacteria 2739
129 Ga0207700_10504065 3300025928 Bacteria 1071
130 Ga0207664_10330271 3300025929 Bacteria 1347
131 Ga0207644_10016720 3300025931 Bacteria 4939
132 Ga0207690_10064550 3300025932 Bacteria 2500
133 Ga0207690_10506334 3300025932 Bacteria 977
134 Ga0207706_10014608 3300025933 Bacteria 7111
135 Ga0207706_10136790 3300025933 Bacteria 2155
136 Ga0207670_10048657 3300025936 Bacteria 2831
137 Ga0207711_10021160 3300025941 Bacteria 5433
138 Ga0207689_10018578 3300025942 Bacteria 5865
139 Ga0207661_10022611 3300025944 Bacteria 4738
140 Ga0207677_10017461 3300026023 Bacteria 4278
141 Ga0207677_10473673 3300026023 Bacteria 1077
142 Ga0207639_10032906 3300026041 Bacteria 3821
143 Ga0207678_10008213 3300026067 Bacteria 9200
144 Ga0207678_10048535 3300026067 Bacteria 3669
145 Ga0207702_10001472 3300026078 Bacteria 23350
146 Ga0207641_10016440 3300026088 Bacteria 6058
147 Ga0207641_10689702 3300026088 Bacteria 1005
148 Ga0207676_10009230 3300026095 Bacteria 7017
149 Ga0207675_100033942 3300026118 Bacteria 4755
150 Ga0207675_100373842 3300026118 Bacteria 1400
151 Ga0207683_10001117 3300026121 Bacteria 24390
152 Ga0207698_10138170 3300026142 Bacteria 2094
153 Ga0207698_10391606 3300026142 Bacteria 1325
154 Ga0207428_10001258 3300027907 Bacteria 27141
155 Ga0268266_10019948 3300028379 Bacteria 5713
156 Ga0307515_10010935 3300028794 Bacteria 17302
157 Ga0307511_10018956 3300030521 Bacteria 6559
158 Ga0307408_100076701 3300031548 Bacteria 2487
159 Ga0316579_10001574 3300031691 Bacteria 8326
160 Ga0307405_10242173 3300031731 Bacteria 1337
161 Ga0307413_10153615 3300031824 Unclassified 1607
162 Ga0307410_10134480 3300031852 Bacteria 1821
163 Ga0307410_10326368 3300031852 Bacteria 1219
164 Ga0307410_10713167 3300031852 Bacteria 846
165 Ga0307406_10284657 3300031901 Bacteria 1262
166 Ga0307407_10025770 3300031903 Bacteria 3105
167 Ga0307407_10055871 3300031903 Bacteria 2283
168 Ga0307407_10109217 3300031903 Bacteria 1733
169 Ga0307412_10339945 3300031911 Bacteria 1201
170 Ga0307412_10445607 3300031911 Bacteria 1065
171 Ga0307409_100360180 3300031995 Bacteria 1375
172 Ga0307409_101001865 3300031995 Bacteria 853
173 Ga0307416_100030342 3300032002 Bacteria 4055
174 Ga0307416_100051269 3300032002 Bacteria 3295
175 Ga0307416_100506702 3300032002 Bacteria 1272
176 Ga0307416_100601780 3300032002 Bacteria 1179
177 Ga0307416_100900894 3300032002 Bacteria 984
178 Ga0307414_10015378 3300032004 Bacteria 4617
179 Ga0307411_10278815 3300032005 Bacteria 1329
180 Ga0307411_10298551 3300032005 Bacteria 1291
181 Ga0307415_100019247 3300032126 Bacteria 4141
182 Ga0307415_100025138 3300032126 Bacteria 3732
183 Ga0307415_100716665 3300032126 Bacteria 904
184 Ga0373956_0004666 3300035119 Bacteria 5477
185 Ga0316584_0653080 3300036712 Bacteria 725
186 Ga0395900_0005099 3300037418 Bacteria 13790
187 Ga0395900_0101342 3300037418 Bacteria 2958
188 Ga0395898_0024824 3300037466 Bacteria 6043
189 Ga0395898_0933615 3300037466 Bacteria 805
190 Ga0436364_0547626 3300037853 Bacteria 7226
191 Ga0395901_0002661 3300038443 Bacteria 18029
192 Ga0395901_0199955 3300038443 Bacteria 2095
193 Ga0439448_0024348 3300042005 Bacteria 1892
194 Ga0439448_0181430 3300042005 Bacteria 736
195 Ga0439435_0010559 3300042436 Bacteria 2195
196 Ga0439459_0001572 3300042438 Bacteria 3395
197 Ga0466969_0235949 3300044656 Bacteria 830
198 Ga0466972_0008221 3300044658 Bacteria 5230
199 Ga0466972_0037079 3300044658 Bacteria 2383
200 Ga0466965_0026803 3300044683 Bacteria 2794
201 Ga0466965_0045245 3300044683 Bacteria 2176
202 Ga0466965_0191295 3300044683 Bacteria 1082
203 Ga0466965_0193456 3300044683 Bacteria 1077
204 Ga0466966_0059806 3300044684 Bacteria 2406
205 Ga0466966_0076838 3300044684 Bacteria 2084
206 Ga0466966_0123771 3300044684 Bacteria 1587
207 Ga0466966_0201488 3300044684 Bacteria 1204
208 Ga0466966_0283453 3300044684 Bacteria 996
209 Ga0466961_0008092 3300044693 Bacteria 6699
210 Ga0466961_0020159 3300044693 Bacteria 4292
211 Ga0466961_0026526 3300044693 Bacteria 3724
212 Ga0466961_0093654 3300044693 Bacteria 1896
213 Ga0466961_0185657 3300044693 Bacteria 1290
214 Ga0466961_0238803 3300044693 Bacteria 1117
215 Ga0466961_0417508 3300044693 Bacteria 813
216 Ga0466961_0481628 3300044693 Bacteria 750
217 Ga0466963_0005493 3300044694 Bacteria 7423
218 Ga0466963_0067994 3300044694 Bacteria 2392
219 Ga0466963_0117725 3300044694 Bacteria 1826
220 Ga0466963_0126903 3300044694 Bacteria 1759
221 Ga0466963_0340851 3300044694 Bacteria 1055
222 Ga0466963_0543490 3300044694 Bacteria 820
223 Ga0466964_0039503 3300044706 Bacteria 1902
224 Ga0466964_0292570 3300044706 Bacteria 818
225 Ga0466971_0016393 3300044719 Bacteria 3269
226 Ga0466971_0073413 3300044719 Bacteria 1555
227 Ga0466971_0176186 3300044719 Bacteria 1004
228 Ga0466971_0342243 3300044719 Bacteria 723
229 Ga0466970_0006609 3300044765 Bacteria 5800
230 Ga0466970_0051505 3300044765 Bacteria 2197
231 Ga0466970_0241891 3300044765 Bacteria 1010
232 Ga0466970_0324635 3300044765 Bacteria 870
233 Ga0466970_0415971 3300044765 Bacteria 768
234 Ga0466957_0127245 3300044842 Bacteria 1628
235 Ga0466957_0233836 3300044842 Bacteria 1217
236 Ga0466957_0422033 3300044842 Bacteria 915
237 Ga0466960_0001576 3300044901 Bacteria 8341
238 Ga0466960_0019466 3300044901 Bacteria 2992
239 Ga0466960_0053477 3300044901 Bacteria 1957
240 Ga0466960_0085492 3300044901 Bacteria 1598
241 Ga0466960_0088625 3300044901 Bacteria 1573
242 Ga0466960_0095707 3300044901 Bacteria 1521
243 Ga0466960_0107818 3300044901 Bacteria 1443
244 Ga0466960_0242497 3300044901 Bacteria 998
245 Ga0466960_0359441 3300044901 Bacteria 832
246 Ga0466960_0380344 3300044901 Bacteria 810
247 Ga0466959_0009061 3300045049 Bacteria 7061
248 Ga0466959_0088084 3300045049 Bacteria 2232
249 Ga0466959_0288657 3300045049 Bacteria 1125
250 Ga0466958_0008299 3300045836 Bacteria 5752
251 Ga0466958_0038357 3300045836 Bacteria 2874
252 Ga0466958_0229166 3300045836 Bacteria 1186
253 Ga0466958_0575337 3300045836 Bacteria 732
254 Ga0466967_0009075 3300045976 Bacteria 7353
255 Ga0466967_0013387 3300045976 Bacteria 6336
256 Ga0466967_0039713 3300045976 Bacteria 4048
257 Ga0466967_0083281 3300045976 Bacteria 2892
258 Ga0466967_0119148 3300045976 Bacteria 2436
259 Ga0466967_0124493 3300045976 Bacteria 2386
260 Ga0466967_0135441 3300045976 Bacteria 2290
261 Ga0466967_0152526 3300045976 Bacteria 2161
262 Ga0466967_0157871 3300045976 Bacteria 2126
263 Ga0466967_0270252 3300045976 Bacteria 1629
264 Ga0466967_0320632 3300045976 Bacteria 1494
265 Ga0466967_0672930 3300045976 Bacteria 1024
266 Ga0466967_0856298 3300045976 Bacteria 903
267 Ga0496100_0067261 3300048903 Bacteria 2379
268 Ga0496100_0414544 3300048903 Bacteria 1028
269 Ga0496101_0229534 3300048904 Bacteria 1442
270 Ga0496102_0000059 3300048905 Bacteria 168633
271 Ga0496102_0004116 3300048905 Bacteria 12334
272 Ga0496102_0007479 3300048905 Bacteria 9335
273 Ga0496103_0000063 3300048906 Bacteria 128503
274 Ga0496103_0006302 3300048906 Bacteria 7091
275 Ga0496104_0020656 3300048907 Bacteria 6039
276 Ga0496105_0126225 3300048908 Bacteria 2109
277 Ga0496106_0010192 3300048909 Bacteria 6944
278 Ga0496107_0136374 3300048910 Bacteria 1813
279 Ga0496108_0006906 3300048911 Bacteria 9188
280 Ga0496108_0177193 3300048911 Bacteria 1846
281 Ga0496108_1028862 3300048911 Bacteria 702
282 Ga0496110_0004730 3300048913 Bacteria 10594
283 Ga0496111_0235904 3300048914 Bacteria 1358
284 Ga0496111_0833008 3300048914 Bacteria 667
285 Ga0496112_0562479 3300048915 Bacteria 1074
286 Ga0496112_1460185 3300048915 Bacteria 598
287 Ga0496113_0027266 3300048916 Bacteria 4093
288 Ga0496117_0080392 3300048920 Bacteria 2144
289 Ga0496118_0066967 3300048921 Bacteria 2619
290 Ga0496119_0000571 3300048922 Bacteria 49743
291 Ga0496119_0073222 3300048922 Bacteria 1998
292 Ga0496120_0001391 3300048923 Bacteria 29334
293 Ga0501317_044127 3300049533 Bacteria 690
294 Ga0501318_016935 3300049534 Bacteria 886
295 Ga0501321_038084 3300049537 Bacteria 667
296 Ga0501034_0842354 3300049571 Bacteria 808
297 Ga0501070_0025518 3300049586 Bacteria 4957
298 Ga0501070_0257171 3300049586 Bacteria 1428
299 nmdc:mga08y16_10789_c1 3300050511 Bacteria 9589
300 nmdc:mga0n895_16116_c1 3300050512 Bacteria 6849
301 nmdc:mga0rr50_354684_c1 3300050513 Bacteria 1234
302 nmdc:mga0rr50_5979_c1 3300050513 Bacteria 7341
303 nmdc:mga08x19_3404_c1 3300050514 Bacteria 9483
304 nmdc:mga0a205_9145_c1 3300050515 Bacteria 9044
305 Ga0495619_0071220 3300053085 Bacteria 2326
306 Ga0500559_0009231 3300053136 Bacteria 4280
307 Ga0466962_0056827 3300061719 Bacteria 1868
308 Ga0466962_0082242 3300061719 Bacteria 1540
309 Ga0466962_0083687 3300061719 Bacteria 1526
310 Ga0466962_0120858 3300061719 Bacteria 1264
311 Ga0466962_0435322 3300061719 Bacteria 659
312 2623501604 2622736605 Bacteria 4992138
313 2861521301 2861520306 Bacteria 8348283
314 2870783507 2870782633 Bacteria 9624083
315 2891328043 2891326441 Bacteria 6439512
316 2990091684 2990088156 Bacteria 6657676
317 3006430076 3006425503 Bacteria 6491253
318 8033687952 8033684223 Bacteria 6906479
319 8057575230 8057568493 Bacteria 7221719
320 Ga0070658_10073795
321 Ga0070658_10426476
322 Ga0070658_10553511
323 Ga0070683_100506300
324 Ga0070670_100034684
325 Ga0068869_100069418
326 Ga0070680_100142066
327 Ga0070680_100316444
328 Ga0070682_100001891
329 Ga0068868_100022445
330 Ga0070660_100120711
331 Ga0070691_10006643
332 Ga0070675_100010743
333 Ga0070671_100001223
334 Ga0070659_100068509
335 Ga0070667_100290090
336 Ga0070714_100098206
337 Ga0070713_100004818
338 Ga0070713_100046596
339 Ga0070710_10000058
340 Ga0070711_100041999
341 Ga0070663_100030725
342 Ga0070663_100030864
343 Ga0070678_100002763
344 Ga0070662_100171081
345 Ga0070681_10021293
346 Ga0070679_100048003
347 Ga0070679_100078843
348 Ga0070679_100320069
349 Ga0070679_100345462
350 Ga0070684_100501914
351 Ga0070693_100013115
352 Ga0070665_100032535
353 Ga0068855_100088999
354 Ga0070664_100032469
355 Ga0068854_100075143
356 Ga0068856_100978719
357 Ga0070702_100001367
358 Ga0068852_100024759
359 Ga0068859_100007784
360 Ga0068859_100044043
361 Ga0068864_100006507
362 Ga0068861_100351091
363 Ga0068870_10032178
364 Ga0068863_100371585
365 Ga0068863_100594926
366 Ga0081455_10003960
367 Ga0081455_10004407
368 Ga0081455_10009663
369 Ga0081455_10018370
370 Ga0081455_10033348
371 Ga0081455_10036350
372 Ga0070717_10061916
373 Ga0070717_10275950
374 Ga0075432_10018125
375 Ga0068871_100008265
376 Ga0075428_100363382
377 Ga0075433_10011087
378 Ga0075434_100006035
379 Ga0075436_100196138
380 Ga0097620_100007784
381 Ga0097620_100044047
382 Ga0075435_100004395
383 Ga0105251_10050636
384 Ga0105240_10076466
385 Ga0105240_10576375
386 Ga0111539_10008646
387 Ga0105245_10492474
388 Ga0105247_10005205
389 Ga0114129_10398085
390 Ga0105243_10813362
391 Ga0105241_10022853
392 Ga0105248_10042082
393 Ga0105237_10051607
394 Ga0105237_10111024
395 Ga0105238_10158090
396 Ga0105239_10097385
397 Ga0105239_10130176
398 Ga0105239_10218555
399 Ga0105246_10009154
400 Ga0157371_10067652
401 Ga0157370_10018442
402 Ga0157370_11042492
403 Ga0157369_10578686
404 Ga0157369_10694255
405 Ga0157369_10723955
406 Ga0157374_10027775
407 Ga0157372_10566219
408 Ga0157372_11137604
409 Ga0157377_10008494
410 Ga0197907_11055830
411 Ga0206349_1825419
412 Ga0206354_10240716
413 Ga0206354_10682268
414 Ga0206353_10272373
415 Ga0206353_10300663
416 Ga0206353_10426218
417 Ga0206353_10488922
418 Ga0213875_10005808
419 Ga0224712_10064650
420 Ga0207656_10040047
421 Ga0207692_10002544
422 Ga0207710_10018332
423 Ga0207688_10089034
424 Ga0207699_10022574
425 Ga0207645_10018026
426 Ga0207705_10010783
427 Ga0207705_10267082
428 Ga0207707_10024496
429 Ga0207707_10744052
430 Ga0207663_10140015
431 Ga0207660_10019462
432 Ga0207660_10078522
433 Ga0207660_10275507
434 Ga0207657_10061085
435 Ga0207657_10155777
436 Ga0207649_10189148
437 Ga0207652_10023841
438 Ga0207652_10047486
439 Ga0207652_10143357
440 Ga0207652_10253394
441 Ga0207652_10267785
442 Ga0207694_10132851
443 Ga0207650_10004545
444 Ga0207659_10022787
445 Ga0207687_10087464
446 Ga0207700_10061115
447 Ga0207700_10067454
448 Ga0207700_10504065
449 Ga0207664_10330271
450 Ga0207644_10016720
451 Ga0207690_10064550
452 Ga0207690_10506334
453 Ga0207706_10014608
454 Ga0207706_10136790
455 Ga0207670_10048657
456 Ga0207711_10021160
457 Ga0207689_10018578
458 Ga0207661_10022611
459 Ga0207677_10017461
460 Ga0207677_10473673
461 Ga0207639_10032906
462 Ga0207678_10008213
463 Ga0207678_10048535
464 Ga0207702_10001472
465 Ga0207641_10016440
466 Ga0207641_10689702
467 Ga0207676_10009230
468 Ga0207675_100033942
469 Ga0207675_100373842
470 Ga0207683_10001117
471 Ga0207698_10138170
472 Ga0207698_10391606
473 Ga0207428_10001258
474 Ga0268266_10019948
475 Ga0307515_10010935
476 Ga0307511_10018956
477 Ga0307408_100076701
478 Ga0316579_10001574
479 Ga0307405_10242173
480 Ga0307413_10153615
481 Ga0307410_10134480
482 Ga0307410_10326368
483 Ga0307410_10713167
484 Ga0307406_10284657
485 Ga0307407_10025770
486 Ga0307407_10055871
487 Ga0307407_10109217
488 Ga0307412_10339945
489 Ga0307412_10445607
490 Ga0307409_100360180
491 Ga0307409_101001865
492 Ga0307416_100030342
493 Ga0307416_100051269
494 Ga0307416_100506702
495 Ga0307416_100601780
496 Ga0307416_100900894
497 Ga0307414_10015378
498 Ga0307411_10278815
499 Ga0307411_10298551
500 Ga0307415_100019247
501 Ga0307415_100025138
502 Ga0307415_100716665
503 Ga0373956_0004666
504 Ga0316584_0653080
505 Ga0395900_0005099
506 Ga0395900_0101342
507 Ga0395898_0024824
508 Ga0395898_0933615
509 Ga0436364_0547626
510 Ga0395901_0002661
511 Ga0395901_0199955
512 Ga0439448_0024348
513 Ga0439448_0181430
514 Ga0439435_0010559
515 Ga0439459_0001572
516 Ga0466969_0235949
517 Ga0466972_0008221
518 Ga0466972_0037079
519 Ga0466965_0026803
520 Ga0466965_0045245
521 Ga0466965_0191295
522 Ga0466965_0193456
523 Ga0466966_0059806
524 Ga0466966_0076838
525 Ga0466966_0123771
526 Ga0466966_0201488
527 Ga0466966_0283453
528 Ga0466961_0008092
529 Ga0466961_0020159
530 Ga0466961_0026526
531 Ga0466961_0093654
532 Ga0466961_0185657
533 Ga0466961_0238803
534 Ga0466961_0417508
535 Ga0466961_0481628
536 Ga0466963_0005493
537 Ga0466963_0067994
538 Ga0466963_0117725
539 Ga0466963_0126903
540 Ga0466963_0340851
541 Ga0466963_0543490
542 Ga0466964_0039503
543 Ga0466964_0292570
544 Ga0466971_0016393
545 Ga0466971_0073413
546 Ga0466971_0176186
547 Ga0466971_0342243
548 Ga0466970_0006609
549 Ga0466970_0051505
550 Ga0466970_0241891
551 Ga0466970_0324635
552 Ga0466970_0415971
553 Ga0466957_0127245
554 Ga0466957_0233836
555 Ga0466957_0422033
556 Ga0466960_0001576
557 Ga0466960_0019466
558 Ga0466960_0053477
559 Ga0466960_0085492
560 Ga0466960_0088625
561 Ga0466960_0095707
562 Ga0466960_0107818
563 Ga0466960_0242497
564 Ga0466960_0359441
565 Ga0466960_0380344
566 Ga0466959_0009061
567 Ga0466959_0088084
568 Ga0466959_0288657
569 Ga0466958_0008299
570 Ga0466958_0038357
571 Ga0466958_0229166
572 Ga0466958_0575337
573 Ga0466967_0009075
574 Ga0466967_0013387
575 Ga0466967_0039713
576 Ga0466967_0083281
577 Ga0466967_0119148
578 Ga0466967_0124493
579 Ga0466967_0135441
580 Ga0466967_0152526
581 Ga0466967_0157871
582 Ga0466967_0270252
583 Ga0466967_0320632
584 Ga0466967_0672930
585 Ga0466967_0856298
586 Ga0496100_0067261
587 Ga0496100_0414544
588 Ga0496101_0229534
589 Ga0496102_0000059
590 Ga0496102_0004116
591 Ga0496102_0007479
592 Ga0496103_0000063
593 Ga0496103_0006302
594 Ga0496104_0020656
595 Ga0496105_0126225
596 Ga0496106_0010192
597 Ga0496107_0136374
598 Ga0496108_0006906
599 Ga0496108_0177193
600 Ga0496108_1028862
601 Ga0496110_0004730
602 Ga0496111_0235904
603 Ga0496111_0833008
604 Ga0496112_0562479
605 Ga0496112_1460185
606 Ga0496113_0027266
607 Ga0496117_0080392
608 Ga0496118_0066967
609 Ga0496119_0000571
610 Ga0496119_0073222
611 Ga0496120_0001391
612 Ga0501317_044127
613 Ga0501318_016935
614 Ga0501321_038084
615 Ga0501034_0842354
616 Ga0501070_0025518
617 Ga0501070_0257171
618 nmdc:mga08y16_10789_c1
619 nmdc:mga0n895_16116_c1
620 nmdc:mga0rr50_354684_c1
621 nmdc:mga0rr50_5979_c1
622 nmdc:mga08x19_3404_c1
623 nmdc:mga0a205_9145_c1
624 Ga0495619_0071220
625 Ga0500559_0009231
626 Ga0466962_0056827
627 Ga0466962_0082242
628 Ga0466962_0083687
629 Ga0466962_0120858
630 Ga0466962_0435322
631 2623501604
632 2861521301
633 2870783507
634 2891328043
635 2990091684
636 3006430076
637 8033687952
638 8057575230

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

59

105

0.97

PF21943

TetR_C_46

Tetracyclin repressor-like, C-terminal domain

127

238

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6o6o-assembly1.cif.gz_B structure of the regulator fasr from mycobacterium tuberculosis 0.9387 56 240
6o6o-assembly1.cif.gz_B structure of the regulator fasr from mycobacterium tuberculosis 0.9098 56 240
6o6n-assembly1.cif.gz_A structure of the regulator fasr from mycobacterium tuberculosis in complex with c20-coa 0.894 49 244
6o6n-assembly1.cif.gz_A structure of the regulator fasr from mycobacterium tuberculosis in complex with c20-coa 0.8764 49 244
3f1b-assembly1.cif.gz_A-2 the crystal structure of a tetr-like transcriptional regulator from rhodococcus sp. rha1. 0.8393 49 240
ID Description Score Start End Superfamily
4x1eB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.998 58 104 1.10.10.60
1pb6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9952 53 104 1.10.10.60
4xk4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9926 54 104 1.10.10.60
4xk4D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9923 54 104 1.10.10.60
4xk4B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9919 54 104 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A1I1DPN5-F1-model_v4 Transcriptional regulator, TetR family 0.933 50 246 GO:0000976
GO:0003700
AF-A0A7K0VEP3-F1-model_v4 TetR family transcriptional regulator 0.9228 39 209 GO:0000976
GO:0003700
AF-A0A1I1DPN5-F1-model_v4 Transcriptional regulator, TetR family 0.919 50 246 GO:0000976
GO:0003700
AF-A0A4P9JDJ7-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9074 46 246 GO:0000976
GO:0003700
AF-A0A6J6IEN7-F1-model_v4 Unannotated protein 0.9051 46 240 GO:0000976
GO:0003700

Map