F404738

General Info

Members Datasets Scaffolds Average Seq Length
318 165 315 404

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0000642|Ga0466970_0000642_10999_12507
Length 476
Sequence VGSLQWAVCNLPAAGCKLLGSRNTQTAQKEAKFFVFCQAFCVFRVFPEKPFLKRPPSIPSPRSRRLPYSPYLRSMQFEQVIGQQEVKQHLVEMVQHNRLSHALLFLGKEGSGALPLAIAFAQYVTCEKVQGRNKPASAEASLFGEAAPAAPTALPMDACGVCAACVKAQQLIHPDIHFSYPVIPKKSGDKPVSTDYITDWREFVKQAPYGNAFDWLQLIGAENKQGNITAEECNDILRKLSLKSFESGYKILLLWMPEYLGKEGNKLLKLIEEPPPDTLFILVAENEEQILPTILSRCQLVKIPLLENSDIATALVQRAQASPEAARQVAGIAEGNYREALQLIQHAEEDWQSLLREWLNATLKGGPVAQVKWIDEISKLGREKQKQFLRYFNHLLEQSIRMRVMGAEMALLPDQEKDFAQRLNKIASVSQQQVLIEELDKAAYYIERNANAKMLFHALTIKLYHIIQDKALILAE

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991444 Filimonas endophytica 3197 Isolate Unclassified
3 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
112 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
113 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
114 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
115 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
116 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
119 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
120 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
125 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
126 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
139 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
140 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
141 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
142 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
143 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
144 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
145 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
146 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
147 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
148 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
156 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
157 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
158 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
159 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
160 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
164 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
165 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.06
Metatranscriptomes 0
Isolates 0.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.35
Nodule 0
Rhizoplane 0
Rhizosphere 91.51
Stem 0
Stem Tuber 0
Unclassified 3.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10006863 3300001979 Bacteria 4674
2 rootL2_10233060 3300003322 Bacteria 2838
3 rootH1_10018125 3300003323 Bacteria 27261
4 rootH1_10039701 3300003323 Bacteria 4376
5 JGI25160J50197_1004190 3300003354 Bacteria 6269
6 Ga0070683_100093950 3300005329 Unclassified 2818
7 Ga0070683_100128339 3300005329 Bacteria 2398
8 Ga0070683_100208690 3300005329 Bacteria 1855
9 Ga0070670_100007303 3300005331 Bacteria 9372
10 Ga0070670_100084863 3300005331 Unclassified 2721
11 Ga0070680_100012898 3300005336 Bacteria 6501
12 Ga0070680_100138184 3300005336 Bacteria 2042
13 Ga0068868_100064350 3300005338 Bacteria 2911
14 Ga0070660_100003030 3300005339 Bacteria 11567
15 Ga0070660_100035550 3300005339 Unclassified 3771
16 Ga0070660_100077187 3300005339 Bacteria 2610
17 Ga0070689_100115378 3300005340 Bacteria 2140
18 Ga0070661_100220365 3300005344 Bacteria 1455
19 Ga0070692_10063369 3300005345 Bacteria 1953
20 Ga0070675_100005909 3300005354 Bacteria 9374
21 Ga0070675_100274422 3300005354 Bacteria 1480
22 Ga0070671_100002427 3300005355 Bacteria 14408
23 Ga0070671_100009718 3300005355 Bacteria 7727
24 Ga0070671_100138226 3300005355 Bacteria 2055
25 Ga0070674_100001416 3300005356 Bacteria 12720
26 Ga0070688_100130902 3300005365 Bacteria 1692
27 Ga0070659_100029933 3300005366 Bacteria 4210
28 Ga0070659_100044697 3300005366 Bacteria 3469
29 Ga0070659_100089333 3300005366 Bacteria 2468
30 Ga0070667_100075591 3300005367 Bacteria 2876
31 Ga0070663_100032787 3300005455 Bacteria 3584
32 Ga0070663_100083388 3300005455 Bacteria 2354
33 Ga0070662_100002826 3300005457 Bacteria 10761
34 Ga0068867_100116492 3300005459 Bacteria 2059
35 Ga0068867_100234386 3300005459 Bacteria 1485
36 Ga0070685_10034412 3300005466 Bacteria 2853
37 Ga0070698_100001254 3300005471 Bacteria 28366
38 Ga0070698_100006036 3300005471 Bacteria 13195
39 Ga0070698_100042319 3300005471 Bacteria 4672
40 Ga0070679_100000216 3300005530 Bacteria 46886
41 Ga0070679_100066359 3300005530 Bacteria 3597
42 Ga0070679_100116920 3300005530 Bacteria 2651
43 Ga0070679_100155135 3300005530 Bacteria 2265
44 Ga0070684_100015624 3300005535 Bacteria 6190
45 Ga0070684_100035641 3300005535 Bacteria 4260
46 Ga0070684_100119919 3300005535 Unclassified 2366
47 Ga0068853_100032989 3300005539 Bacteria 4390
48 Ga0068853_100039135 3300005539 Bacteria 4043
49 Ga0068853_100242318 3300005539 Bacteria 1653
50 Ga0070686_100020651 3300005544 Bacteria 3900
51 Ga0070686_100073604 3300005544 Bacteria 2243
52 Ga0068855_100002548 3300005563 Bacteria 22452
53 Ga0068855_100006503 3300005563 Bacteria 14208
54 Ga0068855_100134897 3300005563 Bacteria 2817
55 Ga0068855_100154665 3300005563 Bacteria 2606
56 Ga0068855_100170426 3300005563 Bacteria 2466
57 Ga0070664_100015016 3300005564 Bacteria 6322
58 Ga0070664_100041965 3300005564 Bacteria 3862
59 Ga0070664_100089242 3300005564 Bacteria 2667
60 Ga0068857_100068808 3300005577 Bacteria 3151
61 Ga0068857_100117331 3300005577 Bacteria 2395
62 Ga0068857_100218706 3300005577 Bacteria 1739
63 Ga0068857_100264882 3300005577 Unclassified 1578
64 Ga0068856_100011464 3300005614 Bacteria 8603
65 Ga0068852_100007190 3300005616 Bacteria 8114
66 Ga0068852_100049965 3300005616 Bacteria 3580
67 Ga0068852_100059286 3300005616 Bacteria 3319
68 Ga0068859_100049681 3300005617 Bacteria 4212
69 Ga0068859_100184202 3300005617 Bacteria 2171
70 Ga0068859_100194225 3300005617 Bacteria 2114
71 Ga0068864_100309426 3300005618 Unclassified 1481
72 Ga0068861_100015304 3300005719 Bacteria 5403
73 Ga0068861_100146495 3300005719 Bacteria 1933
74 Ga0068863_100005104 3300005841 Bacteria 12952
75 Ga0068863_100148999 3300005841 Bacteria 2238
76 Ga0068860_100002191 3300005843 Bacteria 20550
77 Ga0068860_100086860 3300005843 Bacteria 2977
78 Ga0068860_100105296 3300005843 Bacteria 2694
79 Ga0068862_100122610 3300005844 Bacteria 2292
80 Ga0081539_10000402 3300005985 Bacteria 92866
81 Ga0075366_10121147 3300006195 Unclassified 1576
82 Ga0097621_100178514 3300006237 Bacteria 1834
83 Ga0068871_100022106 3300006358 Bacteria 4901
84 Ga0075428_100093948 3300006844 Bacteria 3270
85 Ga0097620_100049681 3300006931 Bacteria 4212
86 Ga0097620_100184200 3300006931 Bacteria 2171
87 Ga0097620_100194226 3300006931 Bacteria 2114
88 Ga0105240_10024324 3300009093 Bacteria 7988
89 Ga0105247_10000312 3300009101 Bacteria 43730
90 Ga0114129_10016609 3300009147 Bacteria 10484
91 Ga0105241_10032709 3300009174 Bacteria 3901
92 Ga0105242_10002533 3300009176 Bacteria 14345
93 Ga0105242_10352243 3300009176 Bacteria 1360
94 Ga0105237_10012006 3300009545 Bacteria 9150
95 Ga0105249_10004672 3300009553 Bacteria 11825
96 Ga0105249_10006038 3300009553 Bacteria 10497
97 Ga0105249_10012584 3300009553 Bacteria 7459
98 Ga0157373_10004192 3300013100 Bacteria 10871
99 Ga0157371_10000518 3300013102 Bacteria 46197
100 Ga0157371_10000668 3300013102 Bacteria 40664
101 Ga0157371_10001280 3300013102 Bacteria 26535
102 Ga0157371_10004536 3300013102 Bacteria 12096
103 Ga0157371_10006471 3300013102 Bacteria 9654
104 Ga0157371_10008105 3300013102 Bacteria 8395
105 Ga0157371_10018179 3300013102 Bacteria 5205
106 Ga0157371_10025035 3300013102 Unclassified 4355
107 Ga0157371_10025672 3300013102 Bacteria 4290
108 Ga0157371_10060905 3300013102 Bacteria 2676
109 Ga0157371_10077883 3300013102 Bacteria 2348
110 Ga0157371_10103169 3300013102 Bacteria 2024
111 Ga0157370_10000221 3300013104 Bacteria 72656
112 Ga0157370_10001339 3300013104 Bacteria 30595
113 Ga0157370_10037609 3300013104 Bacteria 4691
114 Ga0157370_10072429 3300013104 Bacteria 3251
115 Ga0157370_10087387 3300013104 Bacteria 2928
116 Ga0157370_10122615 3300013104 Bacteria 2427
117 Ga0157370_10169914 3300013104 Unclassified 2027
118 Ga0157370_10180726 3300013104 Bacteria 1960
119 Ga0157369_10009116 3300013105 Bacteria 11351
120 Ga0157369_10044208 3300013105 Bacteria 4850
121 Ga0157369_10086083 3300013105 Bacteria 3357
122 Ga0157369_10100486 3300013105 Unclassified 3083
123 Ga0157369_10219767 3300013105 Unclassified 1989
124 Ga0157374_10004214 3300013296 Bacteria 12085
125 Ga0157374_10039626 3300013296 Bacteria 4336
126 Ga0157378_10033012 3300013297 Bacteria 4575
127 Ga0157378_10098187 3300013297 Bacteria 2670
128 Ga0157378_10174431 3300013297 Bacteria 2019
129 Ga0163162_10000635 3300013306 Bacteria 32493
130 Ga0163162_10010735 3300013306 Bacteria 8910
131 Ga0163162_10118052 3300013306 Bacteria 2755
132 Ga0163162_10132337 3300013306 Bacteria 2603
133 Ga0163162_10235844 3300013306 Bacteria 1960
134 Ga0163162_10287268 3300013306 Bacteria 1777
135 Ga0157372_10004411 3300013307 Bacteria 15009
136 Ga0157372_10005014 3300013307 Bacteria 14064
137 Ga0157372_10006653 3300013307 Bacteria 12299
138 Ga0157372_10021759 3300013307 Bacteria 6931
139 Ga0157372_10022467 3300013307 Bacteria 6827
140 Ga0157372_10062777 3300013307 Bacteria 4164
141 Ga0157372_10073651 3300013307 Bacteria 3850
142 Ga0157372_10092121 3300013307 Bacteria 3447
143 Ga0157372_10093582 3300013307 Bacteria 3420
144 Ga0157372_10116905 3300013307 Bacteria 3058
145 Ga0157372_10158647 3300013307 Bacteria 2613
146 Ga0157372_10188947 3300013307 Bacteria 2385
147 Ga0157372_10206138 3300013307 Unclassified 2278
148 Ga0157372_10398321 3300013307 Bacteria 1604
149 Ga0157372_10537655 3300013307 Unclassified 1362
150 Ga0157375_10112546 3300013308 Unclassified 2822
151 Ga0157375_10187001 3300013308 Bacteria 2225
152 Ga0157375_10221035 3300013308 Bacteria 2052
153 Ga0157375_10372912 3300013308 Bacteria 1593
154 Ga0163163_10000368 3300014325 Bacteria 43257
155 Ga0157380_10011022 3300014326 Bacteria 6519
156 Ga0157380_10073664 3300014326 Unclassified 2770
157 Ga0157377_10017172 3300014745 Bacteria 3739
158 Ga0213876_10004268 3300021384 Bacteria 8017
159 Ga0207426_1000104 3300025302 Bacteria 249464
160 Ga0207710_10000279 3300025900 Bacteria 41660
161 Ga0207680_10063466 3300025903 Bacteria 2261
162 Ga0207647_10000222 3300025904 Bacteria 46878
163 Ga0207705_10017674 3300025909 Bacteria 5103
164 Ga0207705_10022994 3300025909 Bacteria 4446
165 Ga0207705_10030785 3300025909 Bacteria 3830
166 Ga0207705_10071993 3300025909 Bacteria 2506
167 Ga0207695_10138669 3300025913 Bacteria 2383
168 Ga0207660_10031187 3300025917 Bacteria 3668
169 Ga0207660_10034718 3300025917 Unclassified 3497
170 Ga0207662_10031724 3300025918 Bacteria 3071
171 Ga0207657_10002131 3300025919 Bacteria 21435
172 Ga0207657_10013362 3300025919 Bacteria 8055
173 Ga0207652_10000090 3300025921 Bacteria 99245
174 Ga0207652_10000999 3300025921 Bacteria 26089
175 Ga0207652_10021688 3300025921 Bacteria 5302
176 Ga0207652_10027220 3300025921 Bacteria 4763
177 Ga0207650_10001942 3300025925 Bacteria 14567
178 Ga0207650_10049582 3300025925 Unclassified 3101
179 Ga0207644_10109306 3300025931 Bacteria 2089
180 Ga0207690_10009821 3300025932 Bacteria 5687
181 Ga0207690_10031982 3300025932 Bacteria 3372
182 Ga0207686_10000464 3300025934 Bacteria 26868
183 Ga0207670_10005230 3300025936 Bacteria 7103
184 Ga0207670_10044896 3300025936 Bacteria 2926
185 Ga0207669_10004021 3300025937 Bacteria 6434
186 Ga0207691_10032590 3300025940 Bacteria 4858
187 Ga0207691_10040979 3300025940 Bacteria 4278
188 Ga0207691_10099138 3300025940 Bacteria 2602
189 Ga0207691_10248407 3300025940 Unclassified 1536
190 Ga0207689_10005906 3300025942 Bacteria 10842
191 Ga0207689_10012248 3300025942 Bacteria 7336
192 Ga0207689_10040558 3300025942 Bacteria 3853
193 Ga0207661_10012877 3300025944 Bacteria 6098
194 Ga0207661_10128675 3300025944 Bacteria 2166
195 Ga0207667_10000492 3300025949 Bacteria 52207
196 Ga0207667_10056280 3300025949 Bacteria 4132
197 Ga0207667_10112567 3300025949 Unclassified 2806
198 Ga0207712_10000590 3300025961 Bacteria 29093
199 Ga0207712_10001092 3300025961 Bacteria 18944
200 Ga0207712_10003015 3300025961 Bacteria 10751
201 Ga0207712_10042814 3300025961 Bacteria 3121
202 Ga0207668_10208996 3300025972 Bacteria 1560
203 Ga0207658_10328895 3300025986 Bacteria 1325
204 Ga0207639_10035456 3300026041 Bacteria 3692
205 Ga0207678_10004101 3300026067 Bacteria 13100
206 Ga0207678_10250467 3300026067 Bacteria 1517
207 Ga0207708_10014269 3300026075 Bacteria 5943
208 Ga0207641_10000345 3300026088 Bacteria 55589
209 Ga0207641_10174364 3300026088 Bacteria 1965
210 Ga0207648_10014196 3300026089 Bacteria 7367
211 Ga0207648_10020369 3300026089 Bacteria 5974
212 Ga0207648_10025485 3300026089 Bacteria 5266
213 Ga0207648_10148432 3300026089 Bacteria 2069
214 Ga0207676_10002971 3300026095 Bacteria 12099
215 Ga0207676_10023032 3300026095 Unclassified 4588
216 Ga0207676_10118132 3300026095 Bacteria 2231
217 Ga0207676_10126678 3300026095 Bacteria 2164
218 Ga0207676_10241302 3300026095 Bacteria 1621
219 Ga0207674_10011497 3300026116 Bacteria 9942
220 Ga0207674_10016189 3300026116 Bacteria 8167
221 Ga0207674_10037833 3300026116 Bacteria 5014
222 Ga0207674_10134383 3300026116 Bacteria 2436
223 Ga0207675_100003440 3300026118 Bacteria 15478
224 Ga0207698_10004325 3300026142 Bacteria 8642
225 Ga0207698_10083586 3300026142 Bacteria 2584
226 Ga0207698_10367662 3300026142 Bacteria 1364
227 Ga0268264_10003545 3300028381 Bacteria 13435
228 Ga0268264_10059364 3300028381 Bacteria 3205
229 Ga0268264_10077745 3300028381 Bacteria 2827
230 Ga0268264_10087048 3300028381 Bacteria 2686
231 Ga0265327_10000597 3300031251 Bacteria 60192
232 Ga0307513_10036622 3300031456 Bacteria 5469
233 Ga0307414_10072257 3300032004 Bacteria 2492
234 Ga0307411_10162263 3300032005 Bacteria 1676
235 Ga0395899_0002500 3300037312 Bacteria 14918
236 Ga0395899_0040082 3300037312 Bacteria 3503
237 Ga0395900_0000927 3300037418 Bacteria 38470
238 Ga0395900_0023573 3300037418 Bacteria 6297
239 Ga0395900_0035921 3300037418 Bacteria 5106
240 Ga0395900_0107397 3300037418 Unclassified 2867
241 Ga0395900_0176035 3300037418 Bacteria 2176
242 Ga0395900_0210200 3300037418 Bacteria 1965
243 Ga0395898_0001101 3300037466 Bacteria 41709
244 Ga0395898_0021245 3300037466 Bacteria 6583
245 Ga0395898_0053382 3300037466 Bacteria 3947
246 Ga0395905_0008404 3300037471 Bacteria 10179
247 Ga0395901_0002745 3300038443 Bacteria 17765
248 Ga0395901_0027618 3300038443 Bacteria 5832
249 Ga0436365_1855296 3300039437 Bacteria 37922
250 Ga0439436_0000172 3300041404 Bacteria 15236
251 Ga0439439_0002187 3300041406 Bacteria 4108
252 Ga0439449_0004184 3300042007 Bacteria 5578
253 Ga0439457_001798 3300042014 Bacteria 6334
254 Ga0439462_0001861 3300042015 Bacteria 4791
255 Ga0450923_004625 3300042125 Bacteria 2167
256 Ga0451577_0007287 3300042876 Bacteria 10897
257 Ga0466969_0010773 3300044656 Bacteria 4843
258 Ga0466972_0000021 3300044658 Bacteria 196266
259 Ga0466972_0000243 3300044658 Bacteria 37165
260 Ga0453683_0033160 3300044673 Bacteria 3257
261 Ga0453684_0044569 3300044712 Bacteria 5932
262 Ga0453684_0125226 3300044712 Bacteria 3094
263 Ga0453684_0254048 3300044712 Unclassified 2017
264 Ga0466970_0000642 3300044765 Bacteria 17208
265 Ga0466957_0001395 3300044842 Bacteria 12603
266 Ga0495650_0078898 3300046471 Bacteria 1274
267 Ga0495598_0007271 3300046537 Bacteria 2535
268 Ga0495621_0008051 3300046539 Bacteria 3143
269 Ga0495668_0002900 3300046616 Bacteria 13536
270 Ga0495634_0104784 3300046642 Bacteria 1824
271 Ga0495672_0018758 3300047320 Bacteria 4582
272 Ga0496124_0255846 3300048927 Bacteria 1292
273 Ga0501032_0031602 3300049569 Bacteria 3629
274 Ga0501034_0000007 3300049571 Bacteria 357805
275 Ga0501034_0003185 3300049571 Bacteria 18875
276 Ga0501034_0057997 3300049571 Bacteria 3892
277 Ga0501036_0146202 3300049572 Unclassified 1994
278 Ga0501037_0028685 3300049573 Unclassified 4111
279 Ga0501039_0052812 3300049575 Bacteria 3144
280 Ga0501043_0002462 3300049579 Bacteria 15658
281 Ga0501043_0121634 3300049579 Unclassified 2047
282 Ga0501047_0010460 3300049581 Bacteria 8782
283 Ga0501202_002328 3300049652 Bacteria 3182
284 Ga0501207_000227 3300049654 Bacteria 5696
285 Ga0501217_000418 3300049661 Bacteria 6898
286 Ga0501223_001965 3300049663 Bacteria 4621
287 Ga0501235_003191 3300049669 Bacteria 3534
288 Ga0501242_003537 3300049674 Unclassified 1693
289 Ga0501252_001276 3300049682 Bacteria 2278
290 Ga0501259_009508 3300049688 Unclassified 1579
291 Ga0501221_000953 3300049704 Bacteria 4746
292 Ga0501225_0001243 3300049705 Bacteria 7920
293 Ga0501245_000199 3300049708 Bacteria 6719
294 Ga0501035_0013149 3300049822 Bacteria 7640
295 Ga0501035_0054031 3300049822 Bacteria 3590
296 Ga0501044_0004626 3300049823 Bacteria 15401
297 Ga0501044_0141673 3300049823 Bacteria 2393
298 Ga0501044_0234993 3300049823 Bacteria 1779
299 Ga0501284_00001 3300050005 Bacteria 261916
300 nmdc:mga0k408_33542_c1 3300050493 Bacteria 2937
301 nmdc:mga0k408_49306_c1 3300050493 Bacteria 2437
302 nmdc:mga05p37_11602_c1 3300050507 Bacteria 10500
303 nmdc:mga08y16_14072_c1 3300050511 Bacteria 8422
304 Ga0500644_0004077 3300053088 Bacteria 3635
305 Ga0500646_0000828 3300053090 Bacteria 8560
306 Ga0500583_0000011 3300053092 Bacteria 160380
307 Ga0500583_0000719 3300053092 Bacteria 9634
308 Ga0500555_008521 3300053103 Bacteria 2925
309 Ga0500572_002293 3300053111 Bacteria 4632
310 Ga0500618_015008 3300053125 Bacteria 1966
311 Ga0500568_0000496 3300053139 Bacteria 29008
312 Ga0500622_0028258 3300053156 Bacteria 2952
313 Ga0500637_0047197 3300053178 Bacteria 2446
314 Ga0500611_000016 3300053727 Bacteria 118185
315 Ga0500661_000815 3300055283 Bacteria 5811

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025972 Ga0207668_10208996 Ga0207668_102089961 340
2 3300026116 Ga0207674_10134383 Ga0207674_101343831 345
3 3300021384 Ga0213876_10004268 Ga0213876_100042686 366
4 3300039437 Ga0436365_1855296 Ga0436365_1855296_27011_28210 366
5 3300013102 Ga0157371_10103169 Ga0157371_101031692 369
6 3300005471 Ga0070698_100042319 Ga0070698_1000423194 371
7 3300005459 Ga0068867_100234386 Ga0068867_1002343861 372
8 3300009553 Ga0105249_10006038 Ga0105249_100060384 372
9 3300013306 Ga0163162_10010735 Ga0163162_100107356 372
10 3300025961 Ga0207712_10042814 Ga0207712_100428142 372
11 3300044712 Ga0453684_0254048 Ga0453684_0254048_226_1377 372
12 3300037418 Ga0395900_0210200 Ga0395900_0210200_20_1180 373
13 3300026041 Ga0207639_10035456 Ga0207639_100354563 374
14 3300026089 Ga0207648_10148432 Ga0207648_101484321 374
15 3300005577 Ga0068857_100218706 Ga0068857_1002187062 375
16 3300005985 Ga0081539_10000402 Ga0081539_1000040252 377
17 3300013307 Ga0157372_10537655 Ga0157372_105376551 377
18 3300013297 Ga0157378_10098187 Ga0157378_100981873 378
19 3300031456 Ga0307513_10036622 Ga0307513_100366224 378
20 3300032005 Ga0307411_10162263 Ga0307411_101622632 378
21 3300048927 Ga0496124_0255846 Ga0496124_0255846_105_1280 378
22 3300005329 Ga0070683_100208690 Ga0070683_1002086902 379
23 3300005336 Ga0070680_100138184 Ga0070680_1001381842 379
24 3300005577 Ga0068857_100068808 Ga0068857_1000688083 379
25 3300013102 Ga0157371_10025035 Ga0157371_100250352 379
26 3300013104 Ga0157370_10072429 Ga0157370_100724293 379
27 3300013105 Ga0157369_10100486 Ga0157369_101004862 379
28 3300013307 Ga0157372_10092121 Ga0157372_100921213 379
29 3300025944 Ga0207661_10128675 Ga0207661_101286752 379
30 3300026116 Ga0207674_10037833 Ga0207674_100378333 379
31 3300005841 Ga0068863_100005104 Ga0068863_1000051042 380
32 3300025909 Ga0207705_10071993 Ga0207705_100719932 380
33 3300025921 Ga0207652_10027220 Ga0207652_100272203 380
34 3300025942 Ga0207689_10012248 Ga0207689_100122482 380
35 3300026088 Ga0207641_10000345 Ga0207641_100003459 380
36 3300005577 Ga0068857_100117331 Ga0068857_1001173311 381
37 3300026095 Ga0207676_10241302 Ga0207676_102413021 381
38 3300046537 Ga0495598_0007271 Ga0495598_0007271_151_1353 381
39 3300046539 Ga0495621_0008051 Ga0495621_0008051_1930_3132 381
40 3300053111 Ga0500572_002293 Ga0500572_002293_2387_3592 381
41 3300005355 Ga0070671_100009718 Ga0070671_1000097185 382
42 3300005367 Ga0070667_100075591 Ga0070667_1000755912 382
43 3300005544 Ga0070686_100020651 Ga0070686_1000206512 382
44 3300005843 Ga0068860_100002191 Ga0068860_10000219113 382
45 3300013297 Ga0157378_10033012 Ga0157378_100330122 382
46 3300013306 Ga0163162_10000635 Ga0163162_1000063527 382
47 3300013306 Ga0163162_10118052 Ga0163162_101180523 382
48 3300013308 Ga0157375_10112546 Ga0157375_101125462 382
49 3300025903 Ga0207680_10063466 Ga0207680_100634662 382
50 3300025918 Ga0207662_10031724 Ga0207662_100317242 382
51 3300025940 Ga0207691_10032590 Ga0207691_100325904 382
52 3300026089 Ga0207648_10014196 Ga0207648_100141965 382
53 3300028381 Ga0268264_10003545 Ga0268264_100035457 382
54 3300044658 Ga0466972_0000243 Ga0466972_0000243_10026_11231 382
55 3300046642 Ga0495634_0104784 Ga0495634_0104784_52_1245 382
56 3300005356 Ga0070674_100001416 Ga0070674_1000014167 383
57 3300005471 Ga0070698_100001254 Ga0070698_10000125413 383
58 3300005530 Ga0070679_100066359 Ga0070679_1000663594 383
59 3300013104 Ga0157370_10000221 Ga0157370_1000022112 383
60 3300025937 Ga0207669_10004021 Ga0207669_100040215 383
61 3300050511 nmdc:mga08y16_14072_c1 nmdc:mga08y16_14072_c1_7209_8402 383
62 3300005345 Ga0070692_10063369 Ga0070692_100633691 384
63 3300005355 Ga0070671_100002427 Ga0070671_1000024273 384
64 3300013105 Ga0157369_10044208 Ga0157369_100442083 384
65 3300013307 Ga0157372_10188947 Ga0157372_101889472 384
66 3300014325 Ga0163163_10000368 Ga0163163_1000036824 384
67 3300025909 Ga0207705_10030785 Ga0207705_100307852 384
68 3300025940 Ga0207691_10099138 Ga0207691_100991382 384
69 3300026067 Ga0207678_10250467 Ga0207678_102504672 384
70 3300026095 Ga0207676_10023032 Ga0207676_100230322 384
71 3300053139 Ga0500568_0000496 Ga0500568_0000496_10291_11502 384
72 3300005336 Ga0070680_100012898 Ga0070680_1000128984 385
73 3300005339 Ga0070660_100035550 Ga0070660_1000355502 385
74 3300005459 Ga0068867_100116492 Ga0068867_1001164922 385
75 3300013100 Ga0157373_10004192 Ga0157373_100041929 385
76 3300013307 Ga0157372_10116905 Ga0157372_101169051 385
77 3300025917 Ga0207660_10034718 Ga0207660_100347183 385
78 3300025919 Ga0207657_10013362 Ga0207657_100133629 385
79 3300025921 Ga0207652_10021688 Ga0207652_100216883 385
80 3300025932 Ga0207690_10009821 Ga0207690_100098214 385
81 3300026089 Ga0207648_10025485 Ga0207648_100254851 385
82 3300003354 JGI25160J50197_1004190 JGI25160J50197_10041905 386
83 3300005338 Ga0068868_100064350 Ga0068868_1000643503 386
84 3300025302 Ga0207426_1000104 Ga0207426_1000104223 386
85 3300049569 Ga0501032_0031602 Ga0501032_0031602_2300_3496 386
86 3300049571 Ga0501034_0003185 Ga0501034_0003185_9189_10385 386
87 3300049573 Ga0501037_0028685 Ga0501037_0028685_16_1212 386
88 3300049575 Ga0501039_0052812 Ga0501039_0052812_456_1652 386
89 3300049579 Ga0501043_0002462 Ga0501043_0002462_7564_8760 386
90 3300049579 Ga0501043_0121634 Ga0501043_0121634_804_2000 386
91 3300049581 Ga0501047_0010460 Ga0501047_0010460_3746_4942 386
92 3300049822 Ga0501035_0013149 Ga0501035_0013149_3509_4705 386
93 3300049823 Ga0501044_0004626 Ga0501044_0004626_8380_9576 386
94 iso_pu_bacteria 2738541278 2738724792 386
95 iso_pu_bacteria 2929154850 2929159856 386
96 3300003323 rootH1_10039701 rootH1_100397013 387
97 3300005719 Ga0068861_100146495 Ga0068861_1001464952 387
98 3300005843 Ga0068860_100086860 Ga0068860_1000868603 387
99 3300009174 Ga0105241_10032709 Ga0105241_100327093 387
100 3300025949 Ga0207667_10112567 Ga0207667_101125673 387
101 3300028381 Ga0268264_10077745 Ga0268264_100777453 387
102 3300044656 Ga0466969_0010773 Ga0466969_0010773_1951_3156 387
103 3300049674 Ga0501242_003537 Ga0501242_003537_474_1682 387
104 3300053125 Ga0500618_015008 Ga0500618_015008_358_1563 387
105 3300005844 Ga0068862_100122610 Ga0068862_1001226101 388
106 3300009093 Ga0105240_10024324 Ga0105240_100243244 388
107 3300013102 Ga0157371_10018179 Ga0157371_100181795 388
108 3300013104 Ga0157370_10122615 Ga0157370_101226154 388
109 3300013307 Ga0157372_10022467 Ga0157372_100224675 388
110 3300014326 Ga0157380_10011022 Ga0157380_100110223 388
111 3300025913 Ga0207695_10138669 Ga0207695_101386691 388
112 3300025936 Ga0207670_10044896 Ga0207670_100448962 388
113 3300005339 Ga0070660_100077187 Ga0070660_1000771872 389
114 3300005340 Ga0070689_100115378 Ga0070689_1001153783 389
115 3300005354 Ga0070675_100274422 Ga0070675_1002744221 389
116 3300005365 Ga0070688_100130902 Ga0070688_1001309023 389
117 3300005455 Ga0070663_100032787 Ga0070663_1000327871 389
118 3300005455 Ga0070663_100083388 Ga0070663_1000833883 389
119 3300005466 Ga0070685_10034412 Ga0070685_100344123 389
120 3300005530 Ga0070679_100000216 Ga0070679_10000021621 389
121 3300005530 Ga0070679_100155135 Ga0070679_1001551352 389
122 3300005539 Ga0068853_100242318 Ga0068853_1002423181 389
123 3300005544 Ga0070686_100073604 Ga0070686_1000736043 389
124 3300005563 Ga0068855_100002548 Ga0068855_10000254812 389
125 3300005563 Ga0068855_100006503 Ga0068855_1000065039 389
126 3300005563 Ga0068855_100170426 Ga0068855_1001704262 389
127 3300006844 Ga0075428_100093948 Ga0075428_1000939481 389
128 3300009553 Ga0105249_10012584 Ga0105249_100125843 389
129 3300013102 Ga0157371_10000668 Ga0157371_1000066820 389
130 3300013102 Ga0157371_10001280 Ga0157371_1000128015 389
131 3300013102 Ga0157371_10004536 Ga0157371_1000453611 389
132 3300013102 Ga0157371_10008105 Ga0157371_100081052 389
133 3300013104 Ga0157370_10001339 Ga0157370_1000133913 389
134 3300013104 Ga0157370_10087387 Ga0157370_100873872 389
135 3300013105 Ga0157369_10009116 Ga0157369_1000911612 389
136 3300013306 Ga0163162_10132337 Ga0163162_101323372 389
137 3300013307 Ga0157372_10005014 Ga0157372_1000501414 389
138 3300013307 Ga0157372_10398321 Ga0157372_103983211 389
139 3300013308 Ga0157375_10221035 Ga0157375_102210353 389
140 3300014326 Ga0157380_10073664 Ga0157380_100736643 389
141 3300025909 Ga0207705_10017674 Ga0207705_100176741 389
142 3300025909 Ga0207705_10022994 Ga0207705_100229942 389
143 3300025917 Ga0207660_10031187 Ga0207660_100311872 389
144 3300025921 Ga0207652_10000090 Ga0207652_1000009052 389
145 3300025921 Ga0207652_10000999 Ga0207652_1000099914 389
146 3300025936 Ga0207670_10005230 Ga0207670_100052305 389
147 3300025942 Ga0207689_10040558 Ga0207689_100405582 389
148 3300025949 Ga0207667_10000492 Ga0207667_1000049248 389
149 3300025949 Ga0207667_10056280 Ga0207667_100562802 389
150 3300025961 Ga0207712_10001092 Ga0207712_100010925 389
151 3300025986 Ga0207658_10328895 Ga0207658_103288951 389
152 3300026067 Ga0207678_10004101 Ga0207678_100041018 389
153 3300026075 Ga0207708_10014269 Ga0207708_100142694 389
154 3300026088 Ga0207641_10174364 Ga0207641_101743641 389
155 3300026116 Ga0207674_10016189 Ga0207674_100161892 389
156 3300026142 Ga0207698_10367662 Ga0207698_103676621 389
157 3300037312 Ga0395899_0002500 Ga0395899_0002500_10903_12138 389
158 3300037312 Ga0395899_0040082 Ga0395899_0040082_142_1377 389
159 3300037418 Ga0395900_0000927 Ga0395900_0000927_5550_6785 389
160 3300037418 Ga0395900_0023573 Ga0395900_0023573_2853_4088 389
161 3300037418 Ga0395900_0035921 Ga0395900_0035921_353_1588 389
162 3300037418 Ga0395900_0107397 Ga0395900_0107397_407_1639 389
163 3300037466 Ga0395898_0001101 Ga0395898_0001101_688_1923 389
164 3300037466 Ga0395898_0021245 Ga0395898_0021245_4214_5449 389
165 3300037466 Ga0395898_0053382 Ga0395898_0053382_1972_3204 389
166 3300038443 Ga0395901_0002745 Ga0395901_0002745_9238_10470 389
167 3300038443 Ga0395901_0027618 Ga0395901_0027618_531_1766 389
168 3300042125 Ga0450923_004625 Ga0450923_004625_936_2144 389
169 3300044658 Ga0466972_0000021 Ga0466972_0000021_172035_173243 389
170 3300044765 Ga0466970_0000642 Ga0466970_0000642_10999_12507 389
171 3300050493 nmdc:mga0k408_49306_c1 nmdc:mga0k408_49306_c1_965_2176 389
172 3300053090 Ga0500646_0000828 Ga0500646_0000828_1250_2473 389
173 3300053092 Ga0500583_0000011 Ga0500583_0000011_16248_17456 389
174 3300053092 Ga0500583_0000719 Ga0500583_0000719_3011_4219 389
175 3300003323 rootH1_10018125 rootH1_1001812513 390
176 3300005329 Ga0070683_100128339 Ga0070683_1001283392 390
177 3300005339 Ga0070660_100003030 Ga0070660_10000303010 390
178 3300005354 Ga0070675_100005909 Ga0070675_1000059098 390
179 3300005366 Ga0070659_100029933 Ga0070659_1000299332 390
180 3300005366 Ga0070659_100044697 Ga0070659_1000446971 390
181 3300005366 Ga0070659_100089333 Ga0070659_1000893333 390
182 3300005457 Ga0070662_100002826 Ga0070662_1000028269 390
183 3300005471 Ga0070698_100006036 Ga0070698_1000060367 390
184 3300005535 Ga0070684_100035641 Ga0070684_1000356413 390
185 3300005539 Ga0068853_100032989 Ga0068853_1000329894 390
186 3300005539 Ga0068853_100039135 Ga0068853_1000391353 390
187 3300005563 Ga0068855_100134897 Ga0068855_1001348972 390
188 3300005563 Ga0068855_100154665 Ga0068855_1001546653 390
189 3300005564 Ga0070664_100015016 Ga0070664_1000150165 390
190 3300005614 Ga0068856_100011464 Ga0068856_1000114644 390
191 3300005616 Ga0068852_100007190 Ga0068852_1000071904 390
192 3300005616 Ga0068852_100049965 Ga0068852_1000499654 390
193 3300005616 Ga0068852_100059286 Ga0068852_1000592862 390
194 3300005841 Ga0068863_100148999 Ga0068863_1001489992 390
195 3300006195 Ga0075366_10121147 Ga0075366_101211472 390
196 3300006237 Ga0097621_100178514 Ga0097621_1001785142 390
197 3300006358 Ga0068871_100022106 Ga0068871_1000221063 390
198 3300009147 Ga0114129_10016609 Ga0114129_100166094 390
199 3300009176 Ga0105242_10002533 Ga0105242_100025334 390
200 3300013102 Ga0157371_10000518 Ga0157371_1000051824 390
201 3300013102 Ga0157371_10060905 Ga0157371_100609052 390
202 3300013102 Ga0157371_10077883 Ga0157371_100778831 390
203 3300013104 Ga0157370_10180726 Ga0157370_101807261 390
204 3300013105 Ga0157369_10086083 Ga0157369_100860833 390
205 3300013105 Ga0157369_10219767 Ga0157369_102197672 390
206 3300013296 Ga0157374_10004214 Ga0157374_1000421410 390
207 3300013306 Ga0163162_10287268 Ga0163162_102872681 390
208 3300013307 Ga0157372_10006653 Ga0157372_1000665311 390
209 3300013307 Ga0157372_10021759 Ga0157372_100217592 390
210 3300013307 Ga0157372_10093582 Ga0157372_100935823 390
211 3300013307 Ga0157372_10206138 Ga0157372_102061383 390
212 3300013308 Ga0157375_10372912 Ga0157375_103729122 390
213 3300025904 Ga0207647_10000222 Ga0207647_1000022225 390
214 3300025919 Ga0207657_10002131 Ga0207657_1000213111 390
215 3300025932 Ga0207690_10031982 Ga0207690_100319821 390
216 3300025934 Ga0207686_10000464 Ga0207686_100004645 390
217 3300025961 Ga0207712_10000590 Ga0207712_1000059011 390
218 3300026095 Ga0207676_10118132 Ga0207676_101181321 390
219 3300026116 Ga0207674_10011497 Ga0207674_100114972 390
220 3300026142 Ga0207698_10004325 Ga0207698_100043253 390
221 3300026142 Ga0207698_10083586 Ga0207698_100835862 390
222 3300041404 Ga0439436_0000172 Ga0439436_0000172_3069_4283 390
223 3300041406 Ga0439439_0002187 Ga0439439_0002187_201_1415 390
224 3300042007 Ga0439449_0004184 Ga0439449_0004184_3619_4833 390
225 3300042014 Ga0439457_001798 Ga0439457_001798_232_1446 390
226 3300042015 Ga0439462_0001861 Ga0439462_0001861_652_1866 390
227 3300046616 Ga0495668_0002900 Ga0495668_0002900_11223_12434 390
228 3300049822 Ga0501035_0054031 Ga0501035_0054031_1624_2862 390
229 3300049823 Ga0501044_0141673 Ga0501044_0141673_301_1539 390
230 3300049823 Ga0501044_0234993 Ga0501044_0234993_351_1589 390
231 3300050493 nmdc:mga0k408_33542_c1 nmdc:mga0k408_33542_c1_1508_2722 390
232 3300050507 nmdc:mga05p37_11602_c1 nmdc:mga05p37_11602_c1_7529_8743 390
233 3300053088 Ga0500644_0004077 Ga0500644_0004077_907_2121 390
234 3300053103 Ga0500555_008521 Ga0500555_008521_86_1300 390
235 3300053727 Ga0500611_000016 Ga0500611_000016_100898_102112 390
236 3300005617 Ga0068859_100184202 Ga0068859_1001842021 391
237 3300005719 Ga0068861_100015304 Ga0068861_1000153043 391
238 3300006931 Ga0097620_100184200 Ga0097620_1001842001 391
239 3300009101 Ga0105247_10000312 Ga0105247_100003128 391
240 3300009176 Ga0105242_10352243 Ga0105242_103522431 391
241 3300009553 Ga0105249_10004672 Ga0105249_1000467210 391
242 3300013102 Ga0157371_10006471 Ga0157371_100064713 391
243 3300013307 Ga0157372_10004411 Ga0157372_100044115 391
244 3300025900 Ga0207710_10000279 Ga0207710_1000027920 391
245 3300025942 Ga0207689_10005906 Ga0207689_100059062 391
246 3300025961 Ga0207712_10003015 Ga0207712_1000301510 391
247 3300026095 Ga0207676_10002971 Ga0207676_1000297110 391
248 3300026118 Ga0207675_100003440 Ga0207675_1000034409 391
249 3300028381 Ga0268264_10087048 Ga0268264_100870482 391
250 3300044842 Ga0466957_0001395 Ga0466957_0001395_6541_7758 391
251 3300047320 Ga0495672_0018758 Ga0495672_0018758_1971_3194 391
252 3300050005 Ga0501284_00001 Ga0501284_00001_235123_236331 391
253 3300053178 Ga0500637_0047197 Ga0500637_0047197_257_1465 391
254 3300005329 Ga0070683_100093950 Ga0070683_1000939503 392
255 3300005331 Ga0070670_100007303 Ga0070670_1000073032 392
256 3300005331 Ga0070670_100084863 Ga0070670_1000848632 392
257 3300005344 Ga0070661_100220365 Ga0070661_1002203651 392
258 3300005355 Ga0070671_100138226 Ga0070671_1001382261 392
259 3300005535 Ga0070684_100015624 Ga0070684_1000156244 392
260 3300005564 Ga0070664_100041965 Ga0070664_1000419653 392
261 3300005618 Ga0068864_100309426 Ga0068864_1003094261 392
262 3300013102 Ga0157371_10025672 Ga0157371_100256723 392
263 3300013104 Ga0157370_10037609 Ga0157370_100376094 392
264 3300013307 Ga0157372_10062777 Ga0157372_100627774 392
265 3300013307 Ga0157372_10073651 Ga0157372_100736513 392
266 3300013307 Ga0157372_10158647 Ga0157372_101586472 392
267 3300014745 Ga0157377_10017172 Ga0157377_100171723 392
268 3300025925 Ga0207650_10001942 Ga0207650_100019425 392
269 3300025925 Ga0207650_10049582 Ga0207650_100495821 392
270 3300025931 Ga0207644_10109306 Ga0207644_101093061 392
271 3300025940 Ga0207691_10040979 Ga0207691_100409793 392
272 3300025944 Ga0207661_10012877 Ga0207661_100128773 392
273 3300042876 Ga0451577_0007287 Ga0451577_0007287_7411_8634 392
274 3300044673 Ga0453683_0033160 Ga0453683_0033160_1417_2634 392
275 3300044712 Ga0453684_0044569 Ga0453684_0044569_624_1841 392
276 3300049688 Ga0501259_009508 Ga0501259_009508_82_1305 392
277 iso_pu_bacteria 2818991444 2819585490 392
278 3300032004 Ga0307414_10072257 Ga0307414_100722572 393
279 3300037418 Ga0395900_0176035 Ga0395900_0176035_864_2090 393
280 3300037471 Ga0395905_0008404 Ga0395905_0008404_2239_3465 393
281 3300049571 Ga0501034_0000007 Ga0501034_0000007_124295_125500 393
282 3300049652 Ga0501202_002328 Ga0501202_002328_1827_3056 393
283 3300049654 Ga0501207_000227 Ga0501207_000227_618_1847 393
284 3300049661 Ga0501217_000418 Ga0501217_000418_2419_3648 393
285 3300049663 Ga0501223_001965 Ga0501223_001965_2844_4073 393
286 3300049669 Ga0501235_003191 Ga0501235_003191_1742_2971 393
287 3300049682 Ga0501252_001276 Ga0501252_001276_379_1608 393
288 3300049704 Ga0501221_000953 Ga0501221_000953_2139_3368 393
289 3300049705 Ga0501225_0001243 Ga0501225_0001243_5320_6549 393
290 3300049708 Ga0501245_000199 Ga0501245_000199_1208_2437 393
291 3300005617 Ga0068859_100194225 Ga0068859_1001942252 394
292 3300006931 Ga0097620_100194226 Ga0097620_1001942262 394
293 3300025940 Ga0207691_10248407 Ga0207691_102484072 394
294 3300044712 Ga0453684_0125226 Ga0453684_0125226_1467_2699 394
295 3300005530 Ga0070679_100116920 Ga0070679_1001169202 395
296 3300005535 Ga0070684_100119919 Ga0070684_1001199191 396
297 3300005564 Ga0070664_100089242 Ga0070664_1000892422 396
298 3300013104 Ga0157370_10169914 Ga0157370_101699143 396
299 3300013296 Ga0157374_10039626 Ga0157374_100396263 396
300 3300013297 Ga0157378_10174431 Ga0157378_101744311 396
301 3300013306 Ga0163162_10235844 Ga0163162_102358442 396
302 3300013308 Ga0157375_10187001 Ga0157375_101870011 396
303 3300026095 Ga0207676_10126678 Ga0207676_101266781 396
304 3300046471 Ga0495650_0078898 Ga0495650_0078898_39_1256 396
305 3300005577 Ga0068857_100264882 Ga0068857_1002648821 397
306 3300005617 Ga0068859_100049681 Ga0068859_1000496812 397
307 3300005843 Ga0068860_100105296 Ga0068860_1001052963 397
308 3300006931 Ga0097620_100049681 Ga0097620_1000496813 397
309 3300026089 Ga0207648_10020369 Ga0207648_100203692 397
310 3300028381 Ga0268264_10059364 Ga0268264_100593643 397
311 3300053156 Ga0500622_0028258 Ga0500622_0028258_826_2067 398
312 3300055283 Ga0500661_000815 Ga0500661_000815_2645_3883 398
313 3300049571 Ga0501034_0057997 Ga0501034_0057997_1935_3167 399
314 3300049572 Ga0501036_0146202 Ga0501036_0146202_388_1620 399
315 3300031251 Ga0265327_10000597 Ga0265327_1000059750 402
316 3300003322 rootL2_10233060 rootL2_102330602 404
317 3300001979 JGI24740J21852_10006863 JGI24740J21852_100068633 406
318 3300009545 Ga0105237_10012006 Ga0105237_100120063 406

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

82

307

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.7553 2 277
1a5t-assembly1.cif.gz_A-2 crystal structure of the delta prime subunit of the clamp-loader complex of escherichia coli dna polymerase iii 0.7491 11 398
1a5t-assembly1.cif.gz_A-2 crystal structure of the delta prime subunit of the clamp-loader complex of escherichia coli dna polymerase iii 0.7191 11 398
5fm6-assembly1.cif.gz_B double-heterohexameric rings of full-length rvb1(adp)rvb2(apo) 0.7159 179 275
3pfi-assembly1.cif.gz_B 2.7 angstrom resolution crystal structure of a probable holliday junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni nctc 11168 in complex with adenosine-5'-diphosphate 0.7156 1 286
ID Description Score Start End Superfamily
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8564 3 236 3.40.50.300
af_F4JRP8_232_412_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8172 2 234 3.40.50.300
af_Q2G2X1_1_121_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8085 90 236 3.40.50.300
af_F4KEM0_335_511_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8074 2 233 3.40.50.300
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8064 3 236 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A519VAF5-F1-model_v4 DNA polymerase III subunit delta 0.9218 1 270 GO:0006261
AF-A0A2D9D4V3-F1-model_v4 DNA polymerase III subunit delta 0.9171 1 266 GO:0006261
AF-A0A1H7KRH0-F1-model_v4 DNA polymerase-3 subunit delta 0.9152 1 401 GO:0006261
GO:0016740
AF-A0A2D9D4V3-F1-model_v4 DNA polymerase III subunit delta 0.9097 1 266 GO:0006261
AF-A0A519VAF5-F1-model_v4 DNA polymerase III subunit delta 0.9074 1 270 GO:0006261

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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