F404238

General Info

Members Datasets Scaffolds Average Seq Length
317 190 634 311

Family's Representative Sequence

Representative Sequence 3300035112|Ga0373932_0009884|Ga0373932_0009884_631_1671
Length 346
Sequence VSGSREAVVVKRLAPLSALLLALALLASLPAWIGNSYYVNIASQVLLYAVFALGLNVIVGYAGLVSLGHAGLFGIAAYSGAILINAGHGHFLSIVGALFVTLAAAALFAVLALRGTGLGFVMITVALGQIVWGVAYRWISLTNGDNGVSITSRPAPFGLSLVDADPFYWATLVVFLVAVAAIATFVASPFGASLRGTRDQPRRMNALGYNVWLIRFLAFLFSGLWTGVAGLLFLYYNQFVSPQTVALTASAEVLLMVISGGTATLLGPIGGALLVVIMKNVASAYIERWNFVLGAIFVAIVIFMPEGLMPGSVRLWRWGVRQWRQRLAGPAAEVAAPRGDGTRDGQ

Samples

Sample ID Description Type Environment
1 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
53 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
87 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
88 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
89 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
90 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
91 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
92 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
107 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
108 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
109 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
118 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
130 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
131 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
132 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
182 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
183 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
184 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
185 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
186 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
187 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
189 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
190 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0
Isolates 0.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.26
Nodule 0.32
Rhizoplane 8.83
Rhizosphere 88.33
Stem 0
Stem Tuber 0
Unclassified 1.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373932_0009884 3300035112 Bacteria 2301
2 Ga0070676_10221328 3300005328 Bacteria 1250
3 Ga0070683_100042152 3300005329 Bacteria 4202
4 Ga0070660_100010402 3300005339 Bacteria 6578
5 Ga0070689_100035695 3300005340 Bacteria 3799
6 Ga0070668_100512443 3300005347 Bacteria 1040
7 Ga0070669_100022496 3300005353 Bacteria 4507
8 Ga0070675_100332545 3300005354 Bacteria 1344
9 Ga0070709_10026420 3300005434 Bacteria 3441
10 Ga0070709_10049238 3300005434 Bacteria 2633
11 Ga0070714_100021658 3300005435 Bacteria 5260
12 Ga0070713_100455490 3300005436 Bacteria 1202
13 Ga0070710_10007560 3300005437 Bacteria 5263
14 Ga0070711_100158962 3300005439 Bacteria 1711
15 Ga0070705_100002869 3300005440 Bacteria 8560
16 Ga0070705_100018546 3300005440 Bacteria 3649
17 Ga0070694_100008315 3300005444 Bacteria 6346
18 Ga0070694_100053447 3300005444 Bacteria 2733
19 Ga0070694_100084561 3300005444 Bacteria 2214
20 Ga0070708_100017558 3300005445 Bacteria 5973
21 Ga0070708_100028576 3300005445 Bacteria 4799
22 Ga0070708_100079618 3300005445 Bacteria 2964
23 Ga0070708_100081180 3300005445 Bacteria 2935
24 Ga0070706_100017972 3300005467 Bacteria 6522
25 Ga0070706_100023388 3300005467 Bacteria 5690
26 Ga0070706_100332667 3300005467 Bacteria 1416
27 Ga0070707_100040092 3300005468 Bacteria 4479
28 Ga0070707_100069061 3300005468 Bacteria 3401
29 Ga0070707_100097267 3300005468 Bacteria 2851
30 Ga0070698_100010243 3300005471 Bacteria 10012
31 Ga0070698_100035687 3300005471 Bacteria 5139
32 Ga0070699_100132655 3300005518 Bacteria 2196
33 Ga0070699_100247996 3300005518 Bacteria 1590
34 Ga0070699_100310161 3300005518 Bacteria 1416
35 Ga0070684_100015270 3300005535 Bacteria 6249
36 Ga0070697_100001990 3300005536 Bacteria 15649
37 Ga0070697_100004105 3300005536 Bacteria 11157
38 Ga0070697_100015886 3300005536 Bacteria 5915
39 Ga0070697_100034271 3300005536 Bacteria 4093
40 Ga0070695_100003909 3300005545 Bacteria 8701
41 Ga0070695_100134656 3300005545 Bacteria 1706
42 Ga0070693_100176002 3300005547 Bacteria 1374
43 Ga0070704_100010659 3300005549 Bacteria 5598
44 Ga0070704_100010705 3300005549 Bacteria 5586
45 Ga0070704_100088602 3300005549 Bacteria 2300
46 Ga0070704_100374553 3300005549 Bacteria 1208
47 Ga0068855_100029487 3300005563 Bacteria 6558
48 Ga0068855_100105408 3300005563 Bacteria 3242
49 Ga0068855_100191446 3300005563 Bacteria 2307
50 Ga0068855_100248711 3300005563 Bacteria 1984
51 Ga0068861_100437381 3300005719 Bacteria 1169
52 Ga0068858_100617985 3300005842 Bacteria 1052
53 Ga0068860_100186887 3300005843 Bacteria 2004
54 Ga0081455_10000500 3300005937 Bacteria 50955
55 Ga0081455_10003302 3300005937 Bacteria 18664
56 Ga0081540_1001075 3300005983 Bacteria 24254
57 Ga0081540_1006690 3300005983 Bacteria 8338
58 Ga0081539_10010901 3300005985 Bacteria 7299
59 Ga0070717_10461207 3300006028 Bacteria 1146
60 Ga0070712_100011749 3300006175 Bacteria 5565
61 Ga0070712_100069708 3300006175 Bacteria 2509
62 Ga0075367_10061173 3300006178 Bacteria 2247
63 Ga0075428_100016354 3300006844 Bacteria 8198
64 Ga0075428_100024672 3300006844 Bacteria 6655
65 Ga0075428_100113634 3300006844 Bacteria 2950
66 Ga0075430_100000597 3300006846 Bacteria 27474
67 Ga0075430_100065624 3300006846 Bacteria 3049
68 Ga0075431_100026161 3300006847 Bacteria 5986
69 Ga0075433_10134266 3300006852 Bacteria 2200
70 Ga0075434_100011693 3300006871 Bacteria 8291
71 Ga0075434_100051855 3300006871 Bacteria 4076
72 Ga0075434_100148448 3300006871 Bacteria 2364
73 Ga0075429_100000439 3300006880 Bacteria 30919
74 Ga0075429_100000579 3300006880 Bacteria 28173
75 Ga0075429_100017652 3300006880 Bacteria 6171
76 Ga0075436_100007166 3300006914 Bacteria 7630
77 Ga0075436_100127419 3300006914 Bacteria 1784
78 Ga0075436_100282282 3300006914 Bacteria 1187
79 Ga0075435_100006332 3300007076 Bacteria 8361
80 Ga0075435_100019520 3300007076 Bacteria 5181
81 Ga0075435_100023817 3300007076 Bacteria 4742
82 Ga0075435_100026373 3300007076 Bacteria 4532
83 Ga0075435_100065846 3300007076 Bacteria 2946
84 Ga0075435_100214229 3300007076 Bacteria 1635
85 Ga0099794_10003287 3300007265 Bacteria 6140
86 Ga0099794_10004356 3300007265 Bacteria 5547
87 Ga0099794_10061331 3300007265 Bacteria 1827
88 Ga0099795_10031174 3300007788 Bacteria 1834
89 Ga0105240_10026103 3300009093 Bacteria 7669
90 Ga0105240_10164146 3300009093 Bacteria 2636
91 Ga0111539_10020250 3300009094 Bacteria 8197
92 Ga0111539_10038998 3300009094 Bacteria 5728
93 Ga0111539_10088897 3300009094 Bacteria 3629
94 Ga0111539_10616454 3300009094 Bacteria 1264
95 Ga0114129_10011803 3300009147 Bacteria 12428
96 Ga0114129_10012383 3300009147 Bacteria 12142
97 Ga0114129_10029367 3300009147 Bacteria 7789
98 Ga0114129_10518889 3300009147 Bacteria 1554
99 Ga0105243_10143546 3300009148 Bacteria 2040
100 Ga0105238_10258161 3300009551 Bacteria 1722
101 Ga0105249_10182110 3300009553 Bacteria 2045
102 Ga0123342_1000455 3300009766 Bacteria 64500
103 Ga0099796_10025800 3300010159 Bacteria 1860
104 Ga0105239_10176787 3300010375 Bacteria 2387
105 Ga0157371_10061309 3300013102 Bacteria 2667
106 Ga0157370_10143362 3300013104 Bacteria 2225
107 Ga0157369_10047309 3300013105 Bacteria 4672
108 Ga0157378_10112730 3300013297 Bacteria 2495
109 Ga0163162_10075356 3300013306 Bacteria 3434
110 Ga0157372_10078105 3300013307 Bacteria 3740
111 Ga0157375_10329926 3300013308 Bacteria 1690
112 Ga0157375_10473708 3300013308 Bacteria 1417
113 Ga0182008_10061344 3300014497 Bacteria 1854
114 Ga0157376_10072777 3300014969 Bacteria 2925
115 Ga0207692_10101575 3300025898 Bacteria 1580
116 Ga0207645_10124539 3300025907 Bacteria 1675
117 Ga0207684_10001099 3300025910 Bacteria 30273
118 Ga0207684_10006758 3300025910 Bacteria 10407
119 Ga0207684_10008956 3300025910 Bacteria 8876
120 Ga0207684_10028033 3300025910 Bacteria 4797
121 Ga0207695_10048524 3300025913 Bacteria 4483
122 Ga0207695_10139001 3300025913 Bacteria 2380
123 Ga0207693_10004633 3300025915 Bacteria 11602
124 Ga0207693_10051174 3300025915 Bacteria 3242
125 Ga0207663_10084240 3300025916 Bacteria 2091
126 Ga0207663_10095237 3300025916 Bacteria 1986
127 Ga0207663_10106917 3300025916 Bacteria 1892
128 Ga0207663_10127039 3300025916 Bacteria 1756
129 Ga0207660_10151762 3300025917 Bacteria 1780
130 Ga0207652_10101458 3300025921 Bacteria 2542
131 Ga0207646_10000982 3300025922 Bacteria 36644
132 Ga0207646_10020732 3300025922 Bacteria 6086
133 Ga0207646_10155390 3300025922 Bacteria 2063
134 Ga0207646_10247674 3300025922 Bacteria 1610
135 Ga0207687_10027745 3300025927 Bacteria 3801
136 Ga0207690_10076978 3300025932 Bacteria 2318
137 Ga0207706_10029650 3300025933 Bacteria 4884
138 Ga0207670_10028166 3300025936 Bacteria 3562
139 Ga0207704_10028944 3300025938 Bacteria 3081
140 Ga0207691_10011175 3300025940 Bacteria 8617
141 Ga0207661_10035494 3300025944 Bacteria 3886
142 Ga0207667_10154063 3300025949 Bacteria 2365
143 Ga0207667_10217119 3300025949 Bacteria 1959
144 Ga0207667_10323091 3300025949 Bacteria 1576
145 Ga0207702_10108061 3300026078 Bacteria 2468
146 Ga0207702_10150526 3300026078 Bacteria 2116
147 Ga0209588_1012799 3300027671 Bacteria 2552
148 Ga0209588_1049181 3300027671 Bacteria 1365
149 Ga0207428_10083051 3300027907 Bacteria 2499
150 Ga0207428_10170272 3300027907 Bacteria 1650
151 Ga0207428_10210610 3300027907 Bacteria 1460
152 Ga0268264_10060114 3300028381 Bacteria 3185
153 Ga0307408_100047530 3300031548 Bacteria 3074
154 Ga0373940_0043874 3300035088 Bacteria 1237
155 Ga0373949_0018112 3300035090 Unclassified 1594
156 Ga0373952_0003839 3300035092 Bacteria 2723
157 Ga0373939_0002253 3300035114 Bacteria 4565
158 Ga0373954_0075746 3300035118 Bacteria 1603
159 Ga0373957_0044592 3300035120 Bacteria 1679
160 Ga0373946_0029063 3300035171 Bacteria 2198
161 Ga0373946_0043849 3300035171 Bacteria 1845
162 Ga0373955_0091872 3300035172 Bacteria 1731
163 Ga0373931_0003788 3300035691 Bacteria 6842
164 Ga0373927_0012490 3300035695 Bacteria 5655
165 Ga0373933_0019168 3300035724 Bacteria 3859
166 Ga0373947_0032979 3300035725 Bacteria 3055
167 Ga0373937_0000638 3300036401 Bacteria 30717
168 Ga0373937_0043199 3300036401 Bacteria 4113
169 Ga0373937_0244694 3300036401 Bacteria 1690
170 Ga0373937_0298696 3300036401 Bacteria 1522
171 Ga0373925_0030367 3300037068 Bacteria 3966
172 Ga0395899_0013221 3300037312 Bacteria 6314
173 Ga0395899_0026405 3300037312 Bacteria 4382
174 Ga0395900_0009490 3300037418 Bacteria 9976
175 Ga0395900_0030631 3300037418 Bacteria 5525
176 Ga0395898_0001801 3300037466 Bacteria 27731
177 Ga0395898_0024721 3300037466 Bacteria 6056
178 Ga0436364_0393882 3300037853 Bacteria 4589
179 Ga0436364_1260460 3300037853 Bacteria 34019
180 Ga0395901_0001093 3300038443 Bacteria 28840
181 Ga0395901_0014282 3300038443 Bacteria 8084
182 Ga0395901_0280801 3300038443 Bacteria 1730
183 Ga0436365_1108177 3300039437 Bacteria 1706
184 Ga0436360_0363671 3300039438 Bacteria 2731
185 Ga0439437_002087 3300042000 Bacteria 2117
186 Ga0439450_009564 3300042008 Bacteria 1844
187 Ga0439460_0000254 3300042461 Bacteria 10941
188 Ga0451577_0082470 3300042876 Bacteria 2868
189 Ga0453683_0035039 3300044673 Bacteria 3163
190 Ga0466963_0062798 3300044694 Bacteria 2485
191 Ga0453684_0044726 3300044712 Bacteria 5918
192 Ga0466957_0113607 3300044842 Bacteria 1720
193 Ga0451576_0060957 3300045051 Bacteria 3935
194 Ga0451576_0069246 3300045051 Bacteria 3671
195 Ga0451576_0236370 3300045051 Unclassified 1908
196 Ga0451576_0456646 3300045051 Bacteria 1341
197 Ga0466967_0053048 3300045976 Bacteria 3563
198 Ga0466967_0172752 3300045976 Bacteria 2034
199 Ga0495603_0007402 3300046455 Bacteria 6600
200 Ga0495651_0024292 3300046462 Bacteria 4717
201 Ga0495651_0165665 3300046462 Bacteria 1579
202 Ga0495580_0012564 3300046472 Bacteria 6489
203 Ga0495580_0013628 3300046472 Bacteria 6200
204 Ga0495580_0037872 3300046472 Bacteria 3458
205 Ga0495664_0051587 3300046477 Bacteria 2442
206 Ga0495608_0000890 3300046511 Bacteria 20925
207 Ga0495608_0030648 3300046511 Bacteria 3641
208 Ga0495618_0137164 3300046514 Bacteria 1565
209 Ga0495628_0362956 3300046516 Bacteria 1063
210 Ga0495652_0199876 3300046529 Bacteria 1518
211 Ga0495640_0248912 3300046533 Unclassified 1114
212 Ga0495587_0002800 3300046536 Bacteria 11657
213 Ga0495645_0006461 3300046543 Bacteria 8134
214 Ga0495667_0002657 3300046559 Bacteria 11939
215 Ga0495667_0003101 3300046559 Bacteria 11146
216 Ga0495659_0019594 3300046664 Bacteria 2264
217 Ga0495657_0072277 3300046675 Bacteria 2250
218 Ga0495599_0019691 3300046678 Bacteria 4206
219 Ga0495623_0027994 3300046679 Bacteria 3628
220 Ga0495604_0008196 3300047317 Bacteria 8267
221 Ga0495604_0028711 3300047317 Bacteria 4426
222 Ga0495636_0017098 3300047318 Bacteria 2902
223 Ga0495674_0049606 3300047319 Bacteria 3708
224 Ga0495674_0119934 3300047319 Bacteria 2223
225 Ga0495680_0120942 3300047322 Bacteria 1933
226 Ga0495675_0001936 3300047444 Bacteria 12346
227 Ga0495684_0085819 3300047471 Bacteria 2387
228 Ga0495684_0170203 3300047471 Bacteria 1621
229 Ga0495602_0000557 3300048088 Bacteria 34744
230 Ga0496100_0172612 3300048903 Bacteria 1558
231 Ga0496101_0008070 3300048904 Bacteria 6865
232 Ga0496102_0010260 3300048905 Bacteria 8054
233 Ga0496102_0353039 3300048905 Bacteria 1384
234 Ga0496103_0139332 3300048906 Bacteria 1551
235 Ga0496104_0001551 3300048907 Bacteria 19797
236 Ga0496104_0028862 3300048907 Bacteria 5144
237 Ga0496104_0069971 3300048907 Bacteria 3336
238 Ga0496104_0079336 3300048907 Bacteria 3129
239 Ga0496105_0018623 3300048908 Bacteria 5588
240 Ga0496106_0007280 3300048909 Bacteria 8177
241 Ga0496107_0001735 3300048910 Bacteria 13701
242 Ga0496108_0000798 3300048911 Bacteria 24575
243 Ga0496108_0003850 3300048911 Bacteria 12043
244 Ga0496109_0003634 3300048912 Bacteria 12889
245 Ga0496109_0204653 3300048912 Bacteria 1856
246 Ga0496110_0002582 3300048913 Bacteria 13618
247 Ga0496110_0005478 3300048913 Bacteria 9954
248 Ga0496111_0057395 3300048914 Bacteria 2819
249 Ga0496112_0000947 3300048915 Bacteria 21072
250 Ga0496112_0011112 3300048915 Bacteria 8206
251 Ga0496112_0144629 3300048915 Bacteria 2346
252 Ga0496112_0360947 3300048915 Bacteria 1395
253 Ga0496113_0021777 3300048916 Bacteria 4526
254 Ga0496113_0266643 3300048916 Bacteria 1368
255 Ga0496114_0131726 3300048917 Bacteria 2160
256 Ga0496115_0011080 3300048918 Bacteria 6756
257 Ga0496115_0140356 3300048918 Bacteria 1993
258 Ga0501033_0109909 3300049570 Bacteria 2007
259 Ga0501036_0097855 3300049572 Bacteria 2480
260 Ga0501039_0006678 3300049575 Bacteria 8770
261 Ga0501040_0049488 3300049576 Bacteria 2873
262 Ga0501040_0367043 3300049576 Bacteria 1032
263 Ga0501041_0002326 3300049577 Bacteria 10748
264 Ga0501042_0003234 3300049578 Bacteria 10187
265 Ga0501043_0022581 3300049579 Bacteria 4933
266 Ga0501046_0008138 3300049580 Bacteria 9159
267 Ga0501046_0156645 3300049580 Bacteria 1715
268 Ga0501048_0100762 3300049582 Bacteria 2037
269 Ga0501071_0106998 3300049587 Bacteria 2065
270 Ga0501075_0199901 3300049591 Unclassified 1524
271 Ga0501076_0022644 3300049592 Bacteria 4830
272 Ga0501079_0006344 3300049741 Bacteria 8875
273 Ga0501081_0004964 3300049743 Bacteria 8563
274 Ga0501083_0014565 3300049744 Bacteria 5497
275 Ga0501045_0000334 3300049824 Bacteria 27806
276 Ga0501045_0255937 3300049824 Bacteria 1303
277 nmdc:mga06z11_43734_c1 3300050494 Bacteria 2255
278 nmdc:mga05p37_21086_c1 3300050507 Bacteria 7887
279 nmdc:mga05p37_214597_c1 3300050507 Bacteria 2325
280 nmdc:mga05p37_402796_c1 3300050507 Bacteria 1597
281 nmdc:mga05p37_85086_c1 3300050507 Bacteria 3897
282 nmdc:mga09592_114586_c1 3300050508 Unclassified 2314
283 nmdc:mga09592_153194_c1 3300050508 Bacteria 1989
284 nmdc:mga09592_167931_c1 3300050508 Bacteria 1897
285 nmdc:mga09592_213_c1 3300050508 Bacteria 41780
286 nmdc:mga0qj67_2882_c1 3300050509 Bacteria 12349
287 nmdc:mga0qj67_84851_c1 3300050509 Bacteria 2540
288 nmdc:mga08y16_168323_c1 3300050511 Bacteria 2277
289 nmdc:mga08y16_29567_c1 3300050511 Bacteria 5772
290 nmdc:mga0n895_101792_c1 3300050512 Bacteria 2883
291 nmdc:mga0n895_103250_c1 3300050512 Bacteria 2862
292 nmdc:mga0n895_194852_c1 3300050512 Bacteria 2057
293 nmdc:mga0n895_57051_c1 3300050512 Bacteria 3849
294 nmdc:mga0n895_57154_c1 3300050512 Bacteria 3845
295 nmdc:mga0rr50_346798_c1 3300050513 Bacteria 1248
296 nmdc:mga0rr50_43279_c1 3300050513 Bacteria 3294
297 nmdc:mga0rr50_53837_c1 3300050513 Bacteria 2995
298 nmdc:mga0rr50_80248_c1 3300050513 Bacteria 2515
299 nmdc:mga0rr50_91367_c1 3300050513 Bacteria 2371
300 nmdc:mga08x19_133049_c1 3300050514 Bacteria 1674
301 nmdc:mga08x19_185921_c1 3300050514 Bacteria 1420
302 nmdc:mga08x19_24_c1 3300050514 Bacteria 245940
303 nmdc:mga0a205_104073_c1 3300050515 Bacteria 2738
304 nmdc:mga0a205_9101_c1 3300050515 Bacteria 9061
305 Ga0495601_0001180 3300053077 Bacteria 14281
306 Ga0495612_0004892 3300053078 Bacteria 5542
307 Ga0495595_0087983 3300053084 Bacteria 1487
308 Ga0495619_0008411 3300053085 Bacteria 6527
309 Ga0495619_0128388 3300053085 Bacteria 1741
310 Ga0500643_001301 3300053087 Bacteria 14696
311 Ga0500595_000003 3300053119 Bacteria 419332
312 Ga0501084_0004676 3300054114 Bacteria 11182
313 Ga0501082_0003909 3300060353 Bacteria 13006
314 Ga0501082_0096112 3300060353 Bacteria 2561
315 Ga0501082_0282855 3300060353 Bacteria 1444
316 Ga0530510_0005281 3300061734 Bacteria 8921
317 2828305957 2828305725 Bacteria 4916900
318 Ga0373932_0009884
319 Ga0070676_10221328
320 Ga0070683_100042152
321 Ga0070660_100010402
322 Ga0070689_100035695
323 Ga0070668_100512443
324 Ga0070669_100022496
325 Ga0070675_100332545
326 Ga0070709_10026420
327 Ga0070709_10049238
328 Ga0070714_100021658
329 Ga0070713_100455490
330 Ga0070710_10007560
331 Ga0070711_100158962
332 Ga0070705_100002869
333 Ga0070705_100018546
334 Ga0070694_100008315
335 Ga0070694_100053447
336 Ga0070694_100084561
337 Ga0070708_100017558
338 Ga0070708_100028576
339 Ga0070708_100079618
340 Ga0070708_100081180
341 Ga0070706_100017972
342 Ga0070706_100023388
343 Ga0070706_100332667
344 Ga0070707_100040092
345 Ga0070707_100069061
346 Ga0070707_100097267
347 Ga0070698_100010243
348 Ga0070698_100035687
349 Ga0070699_100132655
350 Ga0070699_100247996
351 Ga0070699_100310161
352 Ga0070684_100015270
353 Ga0070697_100001990
354 Ga0070697_100004105
355 Ga0070697_100015886
356 Ga0070697_100034271
357 Ga0070695_100003909
358 Ga0070695_100134656
359 Ga0070693_100176002
360 Ga0070704_100010659
361 Ga0070704_100010705
362 Ga0070704_100088602
363 Ga0070704_100374553
364 Ga0068855_100029487
365 Ga0068855_100105408
366 Ga0068855_100191446
367 Ga0068855_100248711
368 Ga0068861_100437381
369 Ga0068858_100617985
370 Ga0068860_100186887
371 Ga0081455_10000500
372 Ga0081455_10003302
373 Ga0081540_1001075
374 Ga0081540_1006690
375 Ga0081539_10010901
376 Ga0070717_10461207
377 Ga0070712_100011749
378 Ga0070712_100069708
379 Ga0075367_10061173
380 Ga0075428_100016354
381 Ga0075428_100024672
382 Ga0075428_100113634
383 Ga0075430_100000597
384 Ga0075430_100065624
385 Ga0075431_100026161
386 Ga0075433_10134266
387 Ga0075434_100011693
388 Ga0075434_100051855
389 Ga0075434_100148448
390 Ga0075429_100000439
391 Ga0075429_100000579
392 Ga0075429_100017652
393 Ga0075436_100007166
394 Ga0075436_100127419
395 Ga0075436_100282282
396 Ga0075435_100006332
397 Ga0075435_100019520
398 Ga0075435_100023817
399 Ga0075435_100026373
400 Ga0075435_100065846
401 Ga0075435_100214229
402 Ga0099794_10003287
403 Ga0099794_10004356
404 Ga0099794_10061331
405 Ga0099795_10031174
406 Ga0105240_10026103
407 Ga0105240_10164146
408 Ga0111539_10020250
409 Ga0111539_10038998
410 Ga0111539_10088897
411 Ga0111539_10616454
412 Ga0114129_10011803
413 Ga0114129_10012383
414 Ga0114129_10029367
415 Ga0114129_10518889
416 Ga0105243_10143546
417 Ga0105238_10258161
418 Ga0105249_10182110
419 Ga0123342_1000455
420 Ga0099796_10025800
421 Ga0105239_10176787
422 Ga0157371_10061309
423 Ga0157370_10143362
424 Ga0157369_10047309
425 Ga0157378_10112730
426 Ga0163162_10075356
427 Ga0157372_10078105
428 Ga0157375_10329926
429 Ga0157375_10473708
430 Ga0182008_10061344
431 Ga0157376_10072777
432 Ga0207692_10101575
433 Ga0207645_10124539
434 Ga0207684_10001099
435 Ga0207684_10006758
436 Ga0207684_10008956
437 Ga0207684_10028033
438 Ga0207695_10048524
439 Ga0207695_10139001
440 Ga0207693_10004633
441 Ga0207693_10051174
442 Ga0207663_10084240
443 Ga0207663_10095237
444 Ga0207663_10106917
445 Ga0207663_10127039
446 Ga0207660_10151762
447 Ga0207652_10101458
448 Ga0207646_10000982
449 Ga0207646_10020732
450 Ga0207646_10155390
451 Ga0207646_10247674
452 Ga0207687_10027745
453 Ga0207690_10076978
454 Ga0207706_10029650
455 Ga0207670_10028166
456 Ga0207704_10028944
457 Ga0207691_10011175
458 Ga0207661_10035494
459 Ga0207667_10154063
460 Ga0207667_10217119
461 Ga0207667_10323091
462 Ga0207702_10108061
463 Ga0207702_10150526
464 Ga0209588_1012799
465 Ga0209588_1049181
466 Ga0207428_10083051
467 Ga0207428_10170272
468 Ga0207428_10210610
469 Ga0268264_10060114
470 Ga0307408_100047530
471 Ga0373940_0043874
472 Ga0373949_0018112
473 Ga0373952_0003839
474 Ga0373939_0002253
475 Ga0373954_0075746
476 Ga0373957_0044592
477 Ga0373946_0029063
478 Ga0373946_0043849
479 Ga0373955_0091872
480 Ga0373931_0003788
481 Ga0373927_0012490
482 Ga0373933_0019168
483 Ga0373947_0032979
484 Ga0373937_0000638
485 Ga0373937_0043199
486 Ga0373937_0244694
487 Ga0373937_0298696
488 Ga0373925_0030367
489 Ga0395899_0013221
490 Ga0395899_0026405
491 Ga0395900_0009490
492 Ga0395900_0030631
493 Ga0395898_0001801
494 Ga0395898_0024721
495 Ga0436364_0393882
496 Ga0436364_1260460
497 Ga0395901_0001093
498 Ga0395901_0014282
499 Ga0395901_0280801
500 Ga0436365_1108177
501 Ga0436360_0363671
502 Ga0439437_002087
503 Ga0439450_009564
504 Ga0439460_0000254
505 Ga0451577_0082470
506 Ga0453683_0035039
507 Ga0466963_0062798
508 Ga0453684_0044726
509 Ga0466957_0113607
510 Ga0451576_0060957
511 Ga0451576_0069246
512 Ga0451576_0236370
513 Ga0451576_0456646
514 Ga0466967_0053048
515 Ga0466967_0172752
516 Ga0495603_0007402
517 Ga0495651_0024292
518 Ga0495651_0165665
519 Ga0495580_0012564
520 Ga0495580_0013628
521 Ga0495580_0037872
522 Ga0495664_0051587
523 Ga0495608_0000890
524 Ga0495608_0030648
525 Ga0495618_0137164
526 Ga0495628_0362956
527 Ga0495652_0199876
528 Ga0495640_0248912
529 Ga0495587_0002800
530 Ga0495645_0006461
531 Ga0495667_0002657
532 Ga0495667_0003101
533 Ga0495659_0019594
534 Ga0495657_0072277
535 Ga0495599_0019691
536 Ga0495623_0027994
537 Ga0495604_0008196
538 Ga0495604_0028711
539 Ga0495636_0017098
540 Ga0495674_0049606
541 Ga0495674_0119934
542 Ga0495680_0120942
543 Ga0495675_0001936
544 Ga0495684_0085819
545 Ga0495684_0170203
546 Ga0495602_0000557
547 Ga0496100_0172612
548 Ga0496101_0008070
549 Ga0496102_0010260
550 Ga0496102_0353039
551 Ga0496103_0139332
552 Ga0496104_0001551
553 Ga0496104_0028862
554 Ga0496104_0069971
555 Ga0496104_0079336
556 Ga0496105_0018623
557 Ga0496106_0007280
558 Ga0496107_0001735
559 Ga0496108_0000798
560 Ga0496108_0003850
561 Ga0496109_0003634
562 Ga0496109_0204653
563 Ga0496110_0002582
564 Ga0496110_0005478
565 Ga0496111_0057395
566 Ga0496112_0000947
567 Ga0496112_0011112
568 Ga0496112_0144629
569 Ga0496112_0360947
570 Ga0496113_0021777
571 Ga0496113_0266643
572 Ga0496114_0131726
573 Ga0496115_0011080
574 Ga0496115_0140356
575 Ga0501033_0109909
576 Ga0501036_0097855
577 Ga0501039_0006678
578 Ga0501040_0049488
579 Ga0501040_0367043
580 Ga0501041_0002326
581 Ga0501042_0003234
582 Ga0501043_0022581
583 Ga0501046_0008138
584 Ga0501046_0156645
585 Ga0501048_0100762
586 Ga0501071_0106998
587 Ga0501075_0199901
588 Ga0501076_0022644
589 Ga0501079_0006344
590 Ga0501081_0004964
591 Ga0501083_0014565
592 Ga0501045_0000334
593 Ga0501045_0255937
594 nmdc:mga06z11_43734_c1
595 nmdc:mga05p37_21086_c1
596 nmdc:mga05p37_214597_c1
597 nmdc:mga05p37_402796_c1
598 nmdc:mga05p37_85086_c1
599 nmdc:mga09592_114586_c1
600 nmdc:mga09592_153194_c1
601 nmdc:mga09592_167931_c1
602 nmdc:mga09592_213_c1
603 nmdc:mga0qj67_2882_c1
604 nmdc:mga0qj67_84851_c1
605 nmdc:mga08y16_168323_c1
606 nmdc:mga08y16_29567_c1
607 nmdc:mga0n895_101792_c1
608 nmdc:mga0n895_103250_c1
609 nmdc:mga0n895_194852_c1
610 nmdc:mga0n895_57051_c1
611 nmdc:mga0n895_57154_c1
612 nmdc:mga0rr50_346798_c1
613 nmdc:mga0rr50_43279_c1
614 nmdc:mga0rr50_53837_c1
615 nmdc:mga0rr50_80248_c1
616 nmdc:mga0rr50_91367_c1
617 nmdc:mga08x19_133049_c1
618 nmdc:mga08x19_185921_c1
619 nmdc:mga08x19_24_c1
620 nmdc:mga0a205_104073_c1
621 nmdc:mga0a205_9101_c1
622 Ga0495601_0001180
623 Ga0495612_0004892
624 Ga0495595_0087983
625 Ga0495619_0008411
626 Ga0495619_0128388
627 Ga0500643_001301
628 Ga0500595_000003
629 Ga0501084_0004676
630 Ga0501082_0003909
631 Ga0501082_0096112
632 Ga0501082_0282855
633 Ga0530510_0005281
634 2828305957

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

37

301

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5b57-assembly1.cif.gz_A inward-facing conformation of abc heme importer bhuuv from burkholderia cenocepacia 0.3211 29 276
2jok-assembly1.cif.gz_A nmr structure of the catalytic domain of guanine nucleotide exchange factor bope from burkholderia pseudomallei 0.3107 18 178
5b57-assembly1.cif.gz_A inward-facing conformation of abc heme importer bhuuv from burkholderia cenocepacia 0.2832 29 276
6xbo-assembly1.cif.gz_A x-ray crystal structure of the mouse cmp-sialic acid transporter in complex with 5-methyl cmp 0.2793 10 226
2jok-assembly1.cif.gz_A nmr structure of the catalytic domain of guanine nucleotide exchange factor bope from burkholderia pseudomallei 0.2546 18 178
ID Description Score Start End Superfamily
af_P0AEX7_11_292_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7501 30 251 1.10.3470.10
af_P23200_41_325_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.749 31 249 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.741 29 249 1.10.3470.10
af_P77315_52_317_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7365 29 249 1.10.3470.10
af_P0AE26_50_315_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7355 26 249 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A7Y8IM56-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9091 12 260 GO:0005886
GO:0015658
AF-A0A7T2W2E6-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9085 12 259 GO:0005886
GO:0015658
AF-A0A537RFH9-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9059 3 276 GO:0005886
GO:0015658
AF-A0A2V7ATI0-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9034 24 274 GO:0005886
GO:0015658
AF-A0A522C5V5-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.8997 6 259 GO:0005886
GO:0015658

Map