F404212

General Info

Members Datasets Scaffolds Average Seq Length
317 220 296 296

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10000001|Ga0307513_100000011183
Length 345
Sequence MHHVDGSAAPVPIIGTRRRRKHCAHSRSRSTGISRLTSTTVNTAQPRDSVKPGLIVVDKPQGITSHGVVSRMRRICGTRKVGHGGTLDPMATGVLIVAVGKATKLLTYVSGLDKSYAATVRLGQATVTDDAEGEVTASADASAVAEAAIREGLAAMTGEIDQVPSAVSAVKVDGQRAYKRVRDGETVELKARRVTIAAIEVGEIRREGAFVDVDIEVSCSSGTYIRAIARDLGNALGVGGHLTALRRTRIGGFGLDAAATLEVLGERSEAGEPLGALPMGEAAARLMPIRTATEAEAKALSYGKALEAVGIAGRYAVLDGDGELLAVMMEKGDQAKPETVFAAAS

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
4 2547132424 Nocardia nova SH22a Isolate Unclassified
5 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
6 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
7 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
8 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
9 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
10 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
11 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
12 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
13 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
14 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
15 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
16 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
17 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
18 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
19 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
20 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
21 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
25 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
32 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
35 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
97 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
98 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
113 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
114 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
115 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
116 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
117 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
123 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
124 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
125 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
126 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
139 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
140 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
141 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
142 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
143 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
144 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
145 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
146 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
147 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
150 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
151 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
152 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
153 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
158 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
159 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
185 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
186 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
187 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
188 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
189 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
190 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
191 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
192 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
193 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
199 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
200 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
201 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
202 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
203 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
204 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
205 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
206 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
207 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
208 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
209 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
210 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
211 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
212 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
213 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
214 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
215 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
216 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
217 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
218 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
219 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
220 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.8
Metatranscriptomes 1.58
Isolates 6.62

Biome Distribution

Category Percentage (%)
Aerial Root 0.32
Bulb 0
Endosphere 4.73
Nodule 0
Rhizoplane 4.73
Rhizosphere 81.07
Stem 0
Stem Tuber 0
Unclassified 9.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10010428 3300003203 Bacteria 4123
2 rootH2_10062055 3300003320 Bacteria 2677
3 Ga0070658_10000884 3300005327 Bacteria 25651
4 Ga0070683_100000522 3300005329 Bacteria 26962
5 Ga0070683_100388028 3300005329 Bacteria 1331
6 Ga0070682_100186809 3300005337 Bacteria 1452
7 Ga0068868_100023212 3300005338 Bacteria 4693
8 Ga0070660_100025067 3300005339 Bacteria 4431
9 Ga0070661_100007707 3300005344 Bacteria 7437
10 Ga0070661_100257653 3300005344 Bacteria 1348
11 Ga0070692_10264024 3300005345 Bacteria 1036
12 Ga0070668_100005060 3300005347 Bacteria 9758
13 Ga0070709_10039593 3300005434 Bacteria 2893
14 Ga0070714_100012602 3300005435 Bacteria 6752
15 Ga0070714_100207186 3300005435 Bacteria 1796
16 Ga0070663_100024261 3300005455 Bacteria 4079
17 Ga0070663_100201998 3300005455 Bacteria 1552
18 Ga0068867_100234302 3300005459 Bacteria 1486
19 Ga0070684_100001375 3300005535 Bacteria 17480
20 Ga0070684_100173105 3300005535 Bacteria 1961
21 Ga0070684_100295956 3300005535 Bacteria 1484
22 Ga0070672_100034975 3300005543 Bacteria 3816
23 Ga0070664_100001631 3300005564 Bacteria 17957
24 Ga0070664_100011000 3300005564 Bacteria 7338
25 Ga0068857_100183313 3300005577 Bacteria 1905
26 Ga0070702_100043308 3300005615 Bacteria 2536
27 Ga0068852_100044317 3300005616 Bacteria 3777
28 Ga0068864_100055326 3300005618 Bacteria 3425
29 Ga0068864_100286492 3300005618 Bacteria 1539
30 Ga0068861_100308083 3300005719 Bacteria 1374
31 Ga0068870_10174086 3300005840 Bacteria 1287
32 Ga0068863_100035569 3300005841 Bacteria 4743
33 Ga0068858_100069409 3300005842 Bacteria 3267
34 Ga0068858_100089624 3300005842 Bacteria 2862
35 Ga0068862_100027687 3300005844 Bacteria 4772
36 Ga0068862_100082773 3300005844 Bacteria 2786
37 Ga0081455_10004081 3300005937 Bacteria 16534
38 Ga0081540_1004888 3300005983 Bacteria 10093
39 Ga0081539_10000357 3300005985 Bacteria 100714
40 Ga0081539_10000465 3300005985 Bacteria 85809
41 Ga0081539_10001023 3300005985 Bacteria 51478
42 Ga0070712_100147926 3300006175 Bacteria 1800
43 Ga0070712_100163768 3300006175 Bacteria 1720
44 Ga0075367_10238770 3300006178 Bacteria 1139
45 Ga0075428_100001544 3300006844 Bacteria 24649
46 Ga0075428_100009941 3300006844 Bacteria 10568
47 Ga0075428_100052296 3300006844 Bacteria 4477
48 Ga0075430_100000091 3300006846 Bacteria 52409
49 Ga0075430_100165576 3300006846 Bacteria 1840
50 Ga0075431_100046737 3300006847 Bacteria 4464
51 Ga0075431_100120256 3300006847 Bacteria 2710
52 Ga0068865_100012154 3300006881 Bacteria 5414
53 Ga0111539_10010979 3300009094 Bacteria 11400
54 Ga0105247_10138490 3300009101 Bacteria 1592
55 Ga0114129_10000024 3300009147 Bacteria 116794
56 Ga0105248_10056991 3300009177 Bacteria 4385
57 Ga0105239_10388581 3300010375 Bacteria 1578
58 Ga0157369_10064748 3300013105 Bacteria 3936
59 Ga0163163_10025989 3300014325 Bacteria 5590
60 Ga0163163_10468506 3300014325 Bacteria 1320
61 Ga0157377_10279265 3300014745 Bacteria 1094
62 Ga0157379_10040421 3300014968 Bacteria 4162
63 Ga0206353_10053205 3300020082 Bacteria 6335
64 Ga0206353_11237586 3300020082 Bacteria 2421
65 Ga0213876_10094226 3300021384 Bacteria 1586
66 Ga0224712_10005353 3300022467 Bacteria 3564
67 Ga0207688_10049054 3300025901 Bacteria 2359
68 Ga0207647_10164235 3300025904 Bacteria 1294
69 Ga0207705_10022408 3300025909 Bacteria 4503
70 Ga0207705_10100580 3300025909 Bacteria 2126
71 Ga0207693_10197459 3300025915 Bacteria 1582
72 Ga0207663_10119326 3300025916 Bacteria 1803
73 Ga0207660_10336046 3300025917 Bacteria 1208
74 Ga0207657_10328759 3300025919 Bacteria 1208
75 Ga0207649_10094874 3300025920 Bacteria 1961
76 Ga0207649_10243238 3300025920 Bacteria 1293
77 Ga0207687_10282765 3300025927 Bacteria 1330
78 Ga0207700_10258355 3300025928 Bacteria 1490
79 Ga0207664_10097514 3300025929 Bacteria 2422
80 Ga0207664_10117125 3300025929 Bacteria 2224
81 Ga0207711_10100333 3300025941 Bacteria 2560
82 Ga0207689_10241910 3300025942 Bacteria 1492
83 Ga0207661_10049350 3300025944 Bacteria 3350
84 Ga0207661_10346344 3300025944 Bacteria 1340
85 Ga0207679_10017145 3300025945 Bacteria 4822
86 Ga0207679_10107606 3300025945 Bacteria 2194
87 Ga0207658_10057894 3300025986 Bacteria 2882
88 Ga0207677_10081301 3300026023 Bacteria 2324
89 Ga0207703_10075585 3300026035 Bacteria 2792
90 Ga0207678_10016947 3300026067 Bacteria 6398
91 Ga0207641_10118388 3300026088 Bacteria 2359
92 Ga0207648_10367415 3300026089 Bacteria 1299
93 Ga0207676_10012714 3300026095 Bacteria 6038
94 Ga0207676_10154072 3300026095 Bacteria 1983
95 Ga0207674_10049031 3300026116 Bacteria 4320
96 Ga0207674_10156051 3300026116 Bacteria 2238
97 Ga0207675_100314645 3300026118 Bacteria 1527
98 Ga0207683_10019047 3300026121 Bacteria 5858
99 Ga0268265_10016172 3300028380 Bacteria 5122
100 Ga0268265_10021759 3300028380 Bacteria 4497
101 Ga0307517_10211525 3300028786 Bacteria 1193
102 Ga0307515_10000241 3300028794 Bacteria 135591
103 Ga0307515_10074336 3300028794 Bacteria 4548
104 Ga0307511_10071685 3300030521 Bacteria 2524
105 Ga0316181_1084812 3300030744 Bacteria 1402
106 Ga0316182_1336575 3300030745 Bacteria 5228
107 Ga0307513_10000001 3300031456 Bacteria 1660464
108 Ga0307513_10038738 3300031456 Bacteria 5291
109 Ga0307509_10105797 3300031507 Bacteria 2834
110 Ga0307408_100023241 3300031548 Bacteria 4221
111 Ga0307408_100038663 3300031548 Bacteria 3368
112 Ga0307508_10256119 3300031616 Bacteria 1345
113 Ga0316576_10002824 3300031727 Bacteria 9994
114 Ga0307516_10008994 3300031730 Bacteria 11190
115 Ga0307516_10012042 3300031730 Bacteria 9349
116 Ga0307405_10043890 3300031731 Bacteria 2731
117 Ga0307410_10143628 3300031852 Bacteria 1769
118 Ga0307406_10031734 3300031901 Bacteria 3219
119 Ga0307406_10317472 3300031901 Bacteria 1204
120 Ga0307407_10072180 3300031903 Bacteria 2058
121 Ga0307409_100461682 3300031995 Bacteria 1228
122 Ga0307416_100025710 3300032002 Bacteria 4322
123 Ga0307415_100032764 3300032126 Bacteria 3365
124 Ga0307415_100070679 3300032126 Bacteria 2452
125 Ga0307415_100116184 3300032126 Bacteria 1996
126 Ga0316580_10001404 3300032139 Bacteria 6286
127 Ga0307507_10000001 3300033179 Bacteria 417520
128 Ga0373951_0000072 3300035091 Bacteria 40164
129 Ga0316574_0025655 3300035398 Bacteria 3539
130 Ga0316574_0064828 3300035398 Bacteria 2299
131 Ga0316574_0119089 3300035398 Bacteria 1695
132 Ga0316574_0142702 3300035398 Bacteria 1543
133 Ga0316582_0007130 3300036647 Bacteria 5938
134 Ga0316584_0045661 3300036712 Bacteria 3270
135 Ga0395899_0058088 3300037312 Bacteria 2854
136 Ga0395898_0003894 3300037466 Bacteria 16487
137 Ga0395901_0005197 3300038443 Bacteria 13137
138 Ga0436365_1638635 3300039437 Bacteria 1540
139 Ga0439438_037088 3300041405 Bacteria 1276
140 Ga0451837_1228699 3300041494 Bacteria 986
141 Ga0439432_038820 3300042006 Bacteria 1515
142 Ga0439457_002243 3300042014 Bacteria 5591
143 Ga0466969_0018715 3300044656 Bacteria 3606
144 Ga0466972_0045283 3300044658 Bacteria 2133
145 Ga0466966_0019726 3300044684 Bacteria 4436
146 Ga0466963_0015456 3300044694 Bacteria 4727
147 Ga0466963_0081457 3300044694 Bacteria 2192
148 Ga0466964_0047138 3300044706 Bacteria 1758
149 Ga0466971_0005869 3300044719 Bacteria 5344
150 Ga0466970_0027847 3300044765 Bacteria 2967
151 Ga0466957_0002593 3300044842 Bacteria 9740
152 Ga0466960_0033709 3300044901 Bacteria 2381
153 Ga0466959_0031416 3300045049 Bacteria 3928
154 Ga0466959_0064993 3300045049 Bacteria 2648
155 Ga0466959_0130825 3300045049 Bacteria 1779
156 Ga0466958_0004590 3300045836 Bacteria 7316
157 Ga0466958_0061516 3300045836 Bacteria 2287
158 Ga0466958_0102396 3300045836 Bacteria 1782
159 Ga0466967_0016137 3300045976 Bacteria 5880
160 Ga0466967_0220182 3300045976 Bacteria 1803
161 Ga0495592_0014134 3300046454 Bacteria 6064
162 Ga0495603_0066410 3300046455 Bacteria 2124
163 Ga0495629_0007285 3300046459 Bacteria 8148
164 Ga0495629_0195911 3300046459 Bacteria 1397
165 Ga0495607_0009037 3300046501 Bacteria 6776
166 Ga0495618_0054723 3300046514 Bacteria 2526
167 Ga0495628_0175018 3300046516 Bacteria 1626
168 Ga0495643_0005844 3300046522 Bacteria 8232
169 Ga0495666_0227577 3300046526 Bacteria 853
170 Ga0495640_0002493 3300046533 Bacteria 14821
171 Ga0495634_0063948 3300046642 Bacteria 2440
172 Ga0495658_0097512 3300046683 Bacteria 1750
173 Ga0495669_0004871 3300046684 Bacteria 5568
174 Ga0495613_0060972 3300046689 Bacteria 2762
175 Ga0495624_0052592 3300046690 Bacteria 2573
176 Ga0495670_0058264 3300046691 Bacteria 1939
177 Ga0495581_0083702 3300047315 Bacteria 1848
178 Ga0495676_0007063 3300047321 Bacteria 10301
179 Ga0495683_0001782 3300047323 Bacteria 13586
180 Ga0495687_051183 3300047443 Bacteria 1754
181 Ga0495679_082503 3300047446 Bacteria 911
182 Ga0495685_000573 3300047447 Bacteria 11342
183 Ga0495681_0004804 3300047470 Bacteria 9156
184 Ga0496104_0094149 3300048907 Bacteria 2865
185 Ga0496105_0027101 3300048908 Bacteria 4678
186 Ga0496105_0215326 3300048908 Bacteria 1565
187 Ga0496108_0000028 3300048911 Bacteria 168580
188 Ga0496108_0044357 3300048911 Bacteria 3712
189 Ga0496108_0075211 3300048911 Bacteria 2853
190 Ga0496109_0002755 3300048912 Bacteria 14728
191 Ga0496109_0080415 3300048912 Bacteria 3002
192 Ga0496109_0108579 3300048912 Bacteria 2579
193 Ga0496109_0407936 3300048912 Bacteria 1284
194 Ga0496110_0022907 3300048913 Bacteria 5307
195 Ga0496110_0024619 3300048913 Bacteria 5133
196 Ga0496110_0031163 3300048913 Bacteria 4599
197 Ga0496111_0049895 3300048914 Bacteria 3017
198 Ga0496113_0011112 3300048916 Bacteria 5990
199 Ga0496126_0181143 3300048929 Bacteria 1790
200 Ga0501305_017248 3300049161 Bacteria 1036
201 Ga0501312_014204 3300049528 Bacteria 1117
202 Ga0501031_0010946 3300049568 Bacteria 5910
203 Ga0501031_0013737 3300049568 Bacteria 5278
204 Ga0501032_0078454 3300049569 Bacteria 2198
205 Ga0501032_0098227 3300049569 Bacteria 1940
206 Ga0501033_0007039 3300049570 Bacteria 8786
207 Ga0501033_0140427 3300049570 Bacteria 1746
208 Ga0501033_0349792 3300049570 Bacteria 1035
209 Ga0501034_0006541 3300049571 Bacteria 12520
210 Ga0501034_0007784 3300049571 Bacteria 11399
211 Ga0501034_0011975 3300049571 Bacteria 8965
212 Ga0501034_0041888 3300049571 Bacteria 4633
213 Ga0501034_0084251 3300049571 Bacteria 3181
214 Ga0501034_0141269 3300049571 Bacteria 2387
215 Ga0501034_0199885 3300049571 Bacteria 1957
216 Ga0501036_0005355 3300049572 Bacteria 10389
217 Ga0501036_0123832 3300049572 Bacteria 2183
218 Ga0501036_0131095 3300049572 Bacteria 2116
219 Ga0501036_0182892 3300049572 Bacteria 1764
220 Ga0501037_0038264 3300049573 Bacteria 3534
221 Ga0501038_0000215 3300049574 Bacteria 49658
222 Ga0501038_0001654 3300049574 Bacteria 20719
223 Ga0501038_0034917 3300049574 Bacteria 4419
224 Ga0501039_0022211 3300049575 Bacteria 4870
225 Ga0501041_0031222 3300049577 Bacteria 3217
226 Ga0501042_0000833 3300049578 Bacteria 17140
227 Ga0501042_0207059 3300049578 Bacteria 1414
228 Ga0501043_0017645 3300049579 Bacteria 5597
229 Ga0501043_0044666 3300049579 Bacteria 3484
230 Ga0501043_0051276 3300049579 Bacteria 3242
231 Ga0501043_0187297 3300049579 Bacteria 1610
232 Ga0501046_0035454 3300049580 Bacteria 4021
233 Ga0501046_0246745 3300049580 Bacteria 1315
234 Ga0501047_0000208 3300049581 Bacteria 71122
235 Ga0501047_0000577 3300049581 Bacteria 39081
236 Ga0501047_0009248 3300049581 Bacteria 9305
237 Ga0501047_0105020 3300049581 Bacteria 2705
238 Ga0501047_0113908 3300049581 Bacteria 2586
239 Ga0501047_0428662 3300049581 Bacteria 1153
240 Ga0501048_0000334 3300049582 Bacteria 32432
241 Ga0501048_0037642 3300049582 Bacteria 3474
242 Ga0501067_0001468 3300049583 Bacteria 12802
243 Ga0501068_0015741 3300049584 Bacteria 4349
244 Ga0501070_0038886 3300049586 Bacteria 3969
245 Ga0501070_0140054 3300049586 Bacteria 1997
246 Ga0501071_0032868 3300049587 Bacteria 3686
247 Ga0501072_0000779 3300049588 Bacteria 23322
248 Ga0501073_0162970 3300049589 Bacteria 1544
249 Ga0501073_0311339 3300049589 Bacteria 1086
250 Ga0501076_0062471 3300049592 Bacteria 2966
251 Ga0501077_0012070 3300049593 Bacteria 5408
252 Ga0501079_0006147 3300049741 Bacteria 9005
253 Ga0501083_0000250 3300049744 Bacteria 34192
254 Ga0501083_0023434 3300049744 Bacteria 4281
255 Ga0501083_0087363 3300049744 Bacteria 2062
256 Ga0501035_0016077 3300049822 Bacteria 6904
257 Ga0501035_0017058 3300049822 Bacteria 6691
258 Ga0501035_0017827 3300049822 Bacteria 6548
259 Ga0501035_0061800 3300049822 Bacteria 3333
260 Ga0501035_0133101 3300049822 Bacteria 2166
261 Ga0501044_0087164 3300049823 Bacteria 3153
262 Ga0501044_0089553 3300049823 Bacteria 3106
263 Ga0501044_0100107 3300049823 Bacteria 2917
264 Ga0501044_0181162 3300049823 Bacteria 2073
265 Ga0501044_0183609 3300049823 Bacteria 2057
266 Ga0501044_0250557 3300049823 Bacteria 1712
267 Ga0501044_0310814 3300049823 Bacteria 1502
268 Ga0501044_0366529 3300049823 Bacteria 1358
269 Ga0501045_0071228 3300049824 Bacteria 2558
270 Ga0501045_0206664 3300049824 Bacteria 1463
271 nmdc:mga05p37_11469_c1 3300050507 Bacteria 10558
272 nmdc:mga09592_2_c1 3300050508 Bacteria 168133
273 nmdc:mga0qj67_10_c2 3300050509 Bacteria 57980
274 nmdc:mga06r32_196191_c1 3300050510 Bacteria 2006
275 nmdc:mga06r32_39_c1 3300050510 Bacteria 54656
276 nmdc:mga06r32_65764_c1 3300050510 Bacteria 3498
277 nmdc:mga08y16_17571_c1 3300050511 Bacteria 7534
278 Ga0495655_0074544 3300053083 Bacteria 956
279 Ga0500578_0017383 3300053086 Bacteria 4620
280 Ga0500646_0000037 3300053090 Bacteria 37584
281 Ga0500583_0033664 3300053092 Bacteria 2270
282 Ga0500566_0083399 3300053094 Bacteria 1775
283 Ga0500641_0020963 3300053096 Bacteria 2485
284 Ga0500654_067586 3300053099 Bacteria 1770
285 Ga0500621_093343 3300053126 Bacteria 1194
286 Ga0500652_004238 3300053131 Bacteria 4421
287 Ga0500658_0041362 3300053134 Bacteria 1848
288 Ga0500579_046457 3300053143 Bacteria 2688
289 Ga0500616_0018635 3300053153 Bacteria 3921
290 Ga0500633_0032982 3300053160 Bacteria 1686
291 Ga0500634_0148047 3300053161 Bacteria 1101
292 Ga0500587_005904 3300053739 Bacteria 1636
293 Ga0501082_0001129 3300060353 Bacteria 23639
294 Ga0466962_0063603 3300061719 Bacteria 1762
295 Ga0466962_0116868 3300061719 Bacteria 1285
296 Ga0530510_0116964 3300061734 Bacteria 1955

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025904 Ga0207647_10164235 Ga0207647_101642352 240
2 3300049161 Ga0501305_017248 Ga0501305_017248_158_931 248
3 3300049528 Ga0501312_014204 Ga0501312_014204_42_815 248
4 3300049572 Ga0501036_0131095 Ga0501036_0131095_20_835 261
5 3300049586 Ga0501070_0140054 Ga0501070_0140054_15_830 261
6 3300049589 Ga0501073_0311339 Ga0501073_0311339_251_1066 261
7 3300047446 Ga0495679_082503 Ga0495679_082503_18_818 265
8 3300053083 Ga0495655_0074544 Ga0495655_0074544_23_823 265
9 3300046526 Ga0495666_0227577 Ga0495666_0227577_14_826 267
10 3300047315 Ga0495581_0083702 Ga0495581_0083702_15_827 267
11 3300050510 nmdc:mga06r32_65764_c1 nmdc:mga06r32_65764_c1_2317_3159 272
12 3300044658 Ga0466972_0045283 Ga0466972_0045283_172_1065 273
13 3300044694 Ga0466963_0015456 Ga0466963_0015456_2843_3736 273
14 3300044706 Ga0466964_0047138 Ga0466964_0047138_29_922 273
15 3300044765 Ga0466970_0027847 Ga0466970_0027847_1084_1977 273
16 3300044842 Ga0466957_0002593 Ga0466957_0002593_2594_3487 273
17 3300044901 Ga0466960_0033709 Ga0466960_0033709_1449_2342 273
18 3300045836 Ga0466958_0061516 Ga0466958_0061516_16_909 273
19 3300061719 Ga0466962_0116868 Ga0466962_0116868_123_1016 273
20 3300042014 Ga0439457_002243 Ga0439457_002243_4043_4957 274
21 3300006847 Ga0075431_100120256 Ga0075431_1001202563 275
22 3300033179 Ga0307507_10000001 Ga0307507_10000001208 275
23 3300045049 Ga0466959_0130825 Ga0466959_0130825_341_1267 275
24 3300050510 nmdc:mga06r32_196191_c1 nmdc:mga06r32_196191_c1_988_1893 275
25 3300005345 Ga0070692_10264024 Ga0070692_102640241 276
26 3300006846 Ga0075430_100000091 Ga0075430_10000009117 276
27 3300013105 Ga0157369_10064748 Ga0157369_100647486 276
28 3300020082 Ga0206353_11237586 Ga0206353_112375862 276
29 3300025909 Ga0207705_10100580 Ga0207705_101005802 276
30 3300049571 Ga0501034_0006541 Ga0501034_0006541_2920_3780 276
31 3300006847 Ga0075431_100046737 Ga0075431_1000467378 277
32 iso_pu_bacteria 2857479173 2857481274 277
33 iso_pu_bacteria 2857632687 2857634712 277
34 iso_pu_bacteria 2870801768 2870802959 277
35 iso_pu_bacteria 2870804320 2870805024 277
36 3300005327 Ga0070658_10000884 Ga0070658_100008849 278
37 3300005455 Ga0070663_100201998 Ga0070663_1002019981 278
38 3300005840 Ga0068870_10174086 Ga0068870_101740862 278
39 3300025901 Ga0207688_10049054 Ga0207688_100490543 278
40 3300025909 Ga0207705_10022408 Ga0207705_100224085 278
41 3300026121 Ga0207683_10019047 Ga0207683_100190474 278
42 3300025929 Ga0207664_10117125 Ga0207664_101171252 279
43 3300035091 Ga0373951_0000072 Ga0373951_0000072_30342_31229 279
44 3300031727 Ga0316576_10002824 Ga0316576_100028247 280
45 3300032139 Ga0316580_10001404 Ga0316580_100014044 280
46 3300035398 Ga0316574_0025655 Ga0316574_0025655_687_1556 280
47 3300035398 Ga0316574_0064828 Ga0316574_0064828_707_1573 280
48 3300035398 Ga0316574_0119089 Ga0316574_0119089_495_1361 280
49 3300035398 Ga0316574_0142702 Ga0316574_0142702_84_965 280
50 3300036647 Ga0316582_0007130 Ga0316582_0007130_515_1384 280
51 3300036712 Ga0316584_0045661 Ga0316584_0045661_1980_2849 280
52 3300046684 Ga0495669_0004871 Ga0495669_0004871_91_945 280
53 3300053092 Ga0500583_0033664 Ga0500583_0033664_123_1052 280
54 3300053096 Ga0500641_0020963 Ga0500641_0020963_44_973 280
55 3300031548 Ga0307408_100038663 Ga0307408_1000386633 281
56 3300032002 Ga0307416_100025710 Ga0307416_1000257102 281
57 3300032126 Ga0307415_100116184 Ga0307415_1001161843 281
58 3300006846 Ga0075430_100165576 Ga0075430_1001655761 282
59 3300006844 Ga0075428_100009941 Ga0075428_1000099419 283
60 3300030744 Ga0316181_1084812 Ga0316181_10848121 283
61 3300049570 Ga0501033_0349792 Ga0501033_0349792_116_997 283
62 3300006844 Ga0075428_100001544 Ga0075428_10000154418 284
63 3300020082 Ga0206353_10053205 Ga0206353_100532053 284
64 3300049574 Ga0501038_0000215 Ga0501038_0000215_32271_33155 284
65 3300049574 Ga0501038_0034917 Ga0501038_0034917_1296_2300 284
66 3300049579 Ga0501043_0017645 Ga0501043_0017645_3205_4089 284
67 3300049579 Ga0501043_0051276 Ga0501043_0051276_55_1059 284
68 3300049580 Ga0501046_0035454 Ga0501046_0035454_1602_2486 284
69 3300049581 Ga0501047_0009248 Ga0501047_0009248_657_1541 284
70 3300049582 Ga0501048_0000334 Ga0501048_0000334_22020_22904 284
71 3300049822 Ga0501035_0017058 Ga0501035_0017058_2530_3414 284
72 3300005535 Ga0070684_100173105 Ga0070684_1001731052 285
73 3300031730 Ga0307516_10012042 Ga0307516_100120426 285
74 3300031852 Ga0307410_10143628 Ga0307410_101436281 285
75 3300031901 Ga0307406_10317472 Ga0307406_103174721 285
76 3300031903 Ga0307407_10072180 Ga0307407_100721802 285
77 3300049568 Ga0501031_0010946 Ga0501031_0010946_4719_5585 285
78 iso_pu_bacteria 2919391150 2919392359 285
79 3300041405 Ga0439438_037088 Ga0439438_037088_20_943 286
80 3300042006 Ga0439432_038820 Ga0439432_038820_185_1063 286
81 3300048911 Ga0496108_0000028 Ga0496108_0000028_142796_143677 286
82 3300048913 Ga0496110_0031163 Ga0496110_0031163_2428_3378 286
83 3300049571 Ga0501034_0041888 Ga0501034_0041888_2699_3583 286
84 3300049571 Ga0501034_0084251 Ga0501034_0084251_2178_3080 286
85 3300049571 Ga0501034_0141269 Ga0501034_0141269_537_1421 286
86 3300049744 Ga0501083_0087363 Ga0501083_0087363_1120_2004 286
87 3300060353 Ga0501082_0001129 Ga0501082_0001129_13202_14086 286
88 iso_pu_bacteria 2643221962 2645726961 286
89 3300025986 Ga0207658_10057894 Ga0207658_100578941 287
90 3300028786 Ga0307517_10211525 Ga0307517_102115251 287
91 3300030745 Ga0316182_1336575 Ga0316182_13365753 287
92 3300031507 Ga0307509_10105797 Ga0307509_101057971 287
93 3300031616 Ga0307508_10256119 Ga0307508_102561192 287
94 3300041494 Ga0451837_1228699 Ga0451837_1228699_38_916 287
95 3300046522 Ga0495643_0005844 Ga0495643_0005844_6632_7498 287
96 3300046683 Ga0495658_0097512 Ga0495658_0097512_859_1725 287
97 3300046691 Ga0495670_0058264 Ga0495670_0058264_202_1068 287
98 3300047443 Ga0495687_051183 Ga0495687_051183_353_1219 287
99 3300047447 Ga0495685_000573 Ga0495685_000573_7004_7870 287
100 3300047470 Ga0495681_0004804 Ga0495681_0004804_7704_8570 287
101 3300053086 Ga0500578_0017383 Ga0500578_0017383_3020_3886 287
102 3300053094 Ga0500566_0083399 Ga0500566_0083399_123_989 287
103 3300053099 Ga0500654_067586 Ga0500654_067586_759_1625 287
104 3300053126 Ga0500621_093343 Ga0500621_093343_123_989 287
105 3300053131 Ga0500652_004238 Ga0500652_004238_597_1463 287
106 3300053134 Ga0500658_0041362 Ga0500658_0041362_550_1416 287
107 3300053143 Ga0500579_046457 Ga0500579_046457_904_1770 287
108 3300053153 Ga0500616_0018635 Ga0500616_0018635_2959_3825 287
109 3300053160 Ga0500633_0032982 Ga0500633_0032982_731_1597 287
110 3300053161 Ga0500634_0148047 Ga0500634_0148047_224_1090 287
111 3300053739 Ga0500587_005904 Ga0500587_005904_569_1435 287
112 3300061719 Ga0466962_0063603 Ga0466962_0063603_182_1072 287
113 iso_pu_bacteria 2643221697 2644537857 287
114 iso_pu_bacteria 2643221961 2645720103 287
115 iso_pu_bacteria 2857710386 2857711776 287
116 iso_pu_bacteria 2984592036 2984595078 287
117 3300005337 Ga0070682_100186809 Ga0070682_1001868091 288
118 3300005435 Ga0070714_100012602 Ga0070714_1000126026 288
119 3300048911 Ga0496108_0075211 Ga0496108_0075211_845_1717 288
120 3300048912 Ga0496109_0002755 Ga0496109_0002755_1280_2152 288
121 3300048912 Ga0496109_0407936 Ga0496109_0407936_365_1252 288
122 3300048913 Ga0496110_0024619 Ga0496110_0024619_2660_3532 288
123 3300005543 Ga0070672_100034975 Ga0070672_1000349753 289
124 3300005937 Ga0081455_10004081 Ga0081455_1000408119 289
125 3300006178 Ga0075367_10238770 Ga0075367_102387701 289
126 3300009147 Ga0114129_10000024 Ga0114129_1000002495 289
127 3300031548 Ga0307408_100023241 Ga0307408_1000232412 289
128 3300037312 Ga0395899_0058088 Ga0395899_0058088_1395_2297 289
129 3300037466 Ga0395898_0003894 Ga0395898_0003894_5731_6633 289
130 3300038443 Ga0395901_0005197 Ga0395901_0005197_2924_3826 289
131 3300046501 Ga0495607_0009037 Ga0495607_0009037_5373_6296 289
132 3300047323 Ga0495683_0001782 Ga0495683_0001782_11850_12773 289
133 3300049570 Ga0501033_0007039 Ga0501033_0007039_1351_2286 289
134 3300049571 Ga0501034_0011975 Ga0501034_0011975_2483_3418 289
135 3300049578 Ga0501042_0000833 Ga0501042_0000833_14962_15894 289
136 3300049581 Ga0501047_0113908 Ga0501047_0113908_1453_2388 289
137 3300049744 Ga0501083_0000250 Ga0501083_0000250_15219_16151 289
138 3300049822 Ga0501035_0061800 Ga0501035_0061800_1332_2267 289
139 3300049823 Ga0501044_0087164 Ga0501044_0087164_75_1010 289
140 3300049823 Ga0501044_0250557 Ga0501044_0250557_70_966 289
141 3300050507 nmdc:mga05p37_11469_c1 nmdc:mga05p37_11469_c1_5308_6189 289
142 3300050508 nmdc:mga09592_2_c1 nmdc:mga09592_2_c1_152952_153833 289
143 3300050509 nmdc:mga0qj67_10_c2 nmdc:mga0qj67_10_c2_43038_43919 289
144 3300050510 nmdc:mga06r32_39_c1 nmdc:mga06r32_39_c1_14403_15284 289
145 3300053090 Ga0500646_0000037 Ga0500646_0000037_28825_29712 289
146 iso_pu_bacteria 2995463766 2995468330 289
147 iso_pu_bacteria 3006321560 3006324716 289
148 3300005435 Ga0070714_100207186 Ga0070714_1002071862 290
149 3300005983 Ga0081540_1004888 Ga0081540_10048888 290
150 3300009177 Ga0105248_10056991 Ga0105248_100569913 290
151 3300021384 Ga0213876_10094226 Ga0213876_100942261 290
152 3300025929 Ga0207664_10097514 Ga0207664_100975142 290
153 3300028794 Ga0307515_10000241 Ga0307515_1000024110 290
154 3300028794 Ga0307515_10074336 Ga0307515_100743364 290
155 3300030521 Ga0307511_10071685 Ga0307511_100716851 290
156 3300031730 Ga0307516_10008994 Ga0307516_100089944 290
157 3300039437 Ga0436365_1638635 Ga0436365_1638635_70_981 290
158 3300045836 Ga0466958_0102396 Ga0466958_0102396_798_1721 290
159 3300045976 Ga0466967_0016137 Ga0466967_0016137_4369_5253 290
160 3300046454 Ga0495592_0014134 Ga0495592_0014134_1834_2730 290
161 3300046455 Ga0495603_0066410 Ga0495603_0066410_1038_1934 290
162 3300046459 Ga0495629_0007285 Ga0495629_0007285_4631_5527 290
163 3300046459 Ga0495629_0195911 Ga0495629_0195911_278_1192 290
164 3300046514 Ga0495618_0054723 Ga0495618_0054723_1596_2492 290
165 3300046516 Ga0495628_0175018 Ga0495628_0175018_14_910 290
166 3300046533 Ga0495640_0002493 Ga0495640_0002493_11040_11936 290
167 3300046642 Ga0495634_0063948 Ga0495634_0063948_1529_2425 290
168 3300046689 Ga0495613_0060972 Ga0495613_0060972_328_1224 290
169 3300046690 Ga0495624_0052592 Ga0495624_0052592_625_1521 290
170 3300047321 Ga0495676_0007063 Ga0495676_0007063_8008_8904 290
171 3300049568 Ga0501031_0013737 Ga0501031_0013737_552_1454 290
172 3300049569 Ga0501032_0078454 Ga0501032_0078454_124_1020 290
173 3300049569 Ga0501032_0098227 Ga0501032_0098227_478_1380 290
174 3300049570 Ga0501033_0140427 Ga0501033_0140427_562_1464 290
175 3300049571 Ga0501034_0007784 Ga0501034_0007784_552_1454 290
176 3300049571 Ga0501034_0199885 Ga0501034_0199885_114_1028 290
177 3300049572 Ga0501036_0005355 Ga0501036_0005355_2962_3864 290
178 3300049572 Ga0501036_0123832 Ga0501036_0123832_55_969 290
179 3300049572 Ga0501036_0182892 Ga0501036_0182892_112_1008 290
180 3300049573 Ga0501037_0038264 Ga0501037_0038264_2021_2923 290
181 3300049574 Ga0501038_0001654 Ga0501038_0001654_17486_18388 290
182 3300049575 Ga0501039_0022211 Ga0501039_0022211_3381_4283 290
183 3300049577 Ga0501041_0031222 Ga0501041_0031222_900_1802 290
184 3300049578 Ga0501042_0207059 Ga0501042_0207059_425_1390 290
185 3300049579 Ga0501043_0044666 Ga0501043_0044666_2021_2923 290
186 3300049579 Ga0501043_0187297 Ga0501043_0187297_53_949 290
187 3300049580 Ga0501046_0246745 Ga0501046_0246745_153_1055 290
188 3300049581 Ga0501047_0000208 Ga0501047_0000208_47813_48778 290
189 3300049581 Ga0501047_0000577 Ga0501047_0000577_18000_18902 290
190 3300049581 Ga0501047_0105020 Ga0501047_0105020_1724_2620 290
191 3300049581 Ga0501047_0428662 Ga0501047_0428662_104_1018 290
192 3300049582 Ga0501048_0037642 Ga0501048_0037642_552_1454 290
193 3300049583 Ga0501067_0001468 Ga0501067_0001468_5404_6306 290
194 3300049584 Ga0501068_0015741 Ga0501068_0015741_1106_2008 290
195 3300049586 Ga0501070_0038886 Ga0501070_0038886_2459_3361 290
196 3300049587 Ga0501071_0032868 Ga0501071_0032868_1944_2846 290
197 3300049588 Ga0501072_0000779 Ga0501072_0000779_20034_20936 290
198 3300049589 Ga0501073_0162970 Ga0501073_0162970_75_977 290
199 3300049592 Ga0501076_0062471 Ga0501076_0062471_1655_2557 290
200 3300049593 Ga0501077_0012070 Ga0501077_0012070_3766_4668 290
201 3300049741 Ga0501079_0006147 Ga0501079_0006147_7193_8095 290
202 3300049744 Ga0501083_0023434 Ga0501083_0023434_388_1290 290
203 3300049822 Ga0501035_0016077 Ga0501035_0016077_58_972 290
204 3300049822 Ga0501035_0017827 Ga0501035_0017827_5095_5997 290
205 3300049822 Ga0501035_0133101 Ga0501035_0133101_516_1427 290
206 3300049823 Ga0501044_0100107 Ga0501044_0100107_1603_2514 290
207 3300049823 Ga0501044_0181162 Ga0501044_0181162_343_1257 290
208 3300049823 Ga0501044_0183609 Ga0501044_0183609_938_1834 290
209 3300049823 Ga0501044_0310814 Ga0501044_0310814_49_951 290
210 3300049823 Ga0501044_0366529 Ga0501044_0366529_320_1285 290
211 3300049824 Ga0501045_0071228 Ga0501045_0071228_283_1185 290
212 3300061734 Ga0530510_0116964 Ga0530510_0116964_984_1886 290
213 iso_pu_bacteria 2547132424 2548697750 290
214 iso_pu_bacteria 2919713450 2919716061 290
215 iso_pu_bacteria 2945956166 2945957996 290
216 3300005329 Ga0070683_100000522 Ga0070683_1000005225 291
217 3300005338 Ga0068868_100023212 Ga0068868_1000232124 291
218 3300005339 Ga0070660_100025067 Ga0070660_1000250676 291
219 3300005344 Ga0070661_100007707 Ga0070661_1000077076 291
220 3300005344 Ga0070661_100257653 Ga0070661_1002576531 291
221 3300005434 Ga0070709_10039593 Ga0070709_100395932 291
222 3300005455 Ga0070663_100024261 Ga0070663_1000242615 291
223 3300005459 Ga0068867_100234302 Ga0068867_1002343022 291
224 3300005535 Ga0070684_100001375 Ga0070684_1000013756 291
225 3300005564 Ga0070664_100001631 Ga0070664_10000163115 291
226 3300005564 Ga0070664_100011000 Ga0070664_1000110003 291
227 3300005577 Ga0068857_100183313 Ga0068857_1001833132 291
228 3300005615 Ga0070702_100043308 Ga0070702_1000433082 291
229 3300005616 Ga0068852_100044317 Ga0068852_1000443172 291
230 3300005618 Ga0068864_100055326 Ga0068864_1000553262 291
231 3300005618 Ga0068864_100286492 Ga0068864_1002864922 291
232 3300005719 Ga0068861_100308083 Ga0068861_1003080831 291
233 3300005841 Ga0068863_100035569 Ga0068863_1000355692 291
234 3300005842 Ga0068858_100069409 Ga0068858_1000694093 291
235 3300005842 Ga0068858_100089624 Ga0068858_1000896242 291
236 3300005844 Ga0068862_100082773 Ga0068862_1000827732 291
237 3300006175 Ga0070712_100147926 Ga0070712_1001479262 291
238 3300006175 Ga0070712_100163768 Ga0070712_1001637682 291
239 3300006844 Ga0075428_100052296 Ga0075428_1000522963 291
240 3300009094 Ga0111539_10010979 Ga0111539_100109798 291
241 3300009101 Ga0105247_10138490 Ga0105247_101384902 291
242 3300010375 Ga0105239_10388581 Ga0105239_103885812 291
243 3300014325 Ga0163163_10025989 Ga0163163_100259894 291
244 3300014745 Ga0157377_10279265 Ga0157377_102792651 291
245 3300014968 Ga0157379_10040421 Ga0157379_100404214 291
246 3300022467 Ga0224712_10005353 Ga0224712_100053534 291
247 3300025915 Ga0207693_10197459 Ga0207693_101974592 291
248 3300025916 Ga0207663_10119326 Ga0207663_101193263 291
249 3300025917 Ga0207660_10336046 Ga0207660_103360461 291
250 3300025919 Ga0207657_10328759 Ga0207657_103287591 291
251 3300025920 Ga0207649_10094874 Ga0207649_100948742 291
252 3300025920 Ga0207649_10243238 Ga0207649_102432382 291
253 3300025927 Ga0207687_10282765 Ga0207687_102827652 291
254 3300025928 Ga0207700_10258355 Ga0207700_102583551 291
255 3300025941 Ga0207711_10100333 Ga0207711_101003332 291
256 3300025942 Ga0207689_10241910 Ga0207689_102419101 291
257 3300025944 Ga0207661_10049350 Ga0207661_100493501 291
258 3300025945 Ga0207679_10017145 Ga0207679_100171453 291
259 3300025945 Ga0207679_10107606 Ga0207679_101076061 291
260 3300026023 Ga0207677_10081301 Ga0207677_100813012 291
261 3300026035 Ga0207703_10075585 Ga0207703_100755853 291
262 3300026067 Ga0207678_10016947 Ga0207678_100169476 291
263 3300026088 Ga0207641_10118388 Ga0207641_101183883 291
264 3300026089 Ga0207648_10367415 Ga0207648_103674152 291
265 3300026095 Ga0207676_10012714 Ga0207676_100127144 291
266 3300026095 Ga0207676_10154072 Ga0207676_101540721 291
267 3300026116 Ga0207674_10156051 Ga0207674_101560512 291
268 3300026118 Ga0207675_100314645 Ga0207675_1003146452 291
269 3300028380 Ga0268265_10021759 Ga0268265_100217596 291
270 3300031901 Ga0307406_10031734 Ga0307406_100317342 291
271 3300031995 Ga0307409_100461682 Ga0307409_1004616822 291
272 3300032126 Ga0307415_100032764 Ga0307415_1000327642 291
273 3300032126 Ga0307415_100070679 Ga0307415_1000706792 291
274 3300044694 Ga0466963_0081457 Ga0466963_0081457_713_1594 291
275 3300045976 Ga0466967_0220182 Ga0466967_0220182_632_1513 291
276 3300048907 Ga0496104_0094149 Ga0496104_0094149_291_1178 291
277 3300048908 Ga0496105_0027101 Ga0496105_0027101_2469_3356 291
278 3300048908 Ga0496105_0215326 Ga0496105_0215326_632_1516 291
279 3300048911 Ga0496108_0044357 Ga0496108_0044357_2451_3338 291
280 3300048912 Ga0496109_0080415 Ga0496109_0080415_1350_2237 291
281 3300048912 Ga0496109_0108579 Ga0496109_0108579_1397_2281 291
282 3300048913 Ga0496110_0022907 Ga0496110_0022907_4261_5148 291
283 3300048914 Ga0496111_0049895 Ga0496111_0049895_399_1286 291
284 3300048916 Ga0496113_0011112 Ga0496113_0011112_4363_5250 291
285 3300050511 nmdc:mga08y16_17571_c1 nmdc:mga08y16_17571_c1_261_1163 291
286 iso_pu_bacteria 2784132109 2784472574 291
287 3300003320 rootH2_10062055 rootH2_100620552 292
288 3300005329 Ga0070683_100388028 Ga0070683_1003880282 292
289 3300005535 Ga0070684_100295956 Ga0070684_1002959562 292
290 3300005985 Ga0081539_10000357 Ga0081539_1000035729 292
291 3300005985 Ga0081539_10001023 Ga0081539_1000102333 292
292 3300006881 Ga0068865_100012154 Ga0068865_1000121542 292
293 3300014325 Ga0163163_10468506 Ga0163163_104685061 292
294 3300025944 Ga0207661_10346344 Ga0207661_103463441 292
295 3300026116 Ga0207674_10049031 Ga0207674_100490314 292
296 3300031456 Ga0307513_10000001 Ga0307513_100000011183 292
297 3300031731 Ga0307405_10043890 Ga0307405_100438902 292
298 3300044656 Ga0466969_0018715 Ga0466969_0018715_2600_3541 292
299 3300044684 Ga0466966_0019726 Ga0466966_0019726_1905_2798 292
300 3300044719 Ga0466971_0005869 Ga0466971_0005869_1407_2348 292
301 3300045049 Ga0466959_0031416 Ga0466959_0031416_2451_3392 292
302 3300045049 Ga0466959_0064993 Ga0466959_0064993_666_1559 292
303 3300045836 Ga0466958_0004590 Ga0466958_0004590_2500_3441 292
304 3300049823 Ga0501044_0089553 Ga0501044_0089553_1432_2316 292
305 iso_pu_bacteria 2515154088 2515497085 292
306 iso_pu_bacteria 2515154129 2515721903 292
307 iso_pu_bacteria 2515154202 2516085824 292
308 iso_pu_bacteria 2675903059 2676486019 292
309 iso_pu_bacteria 8056054917 8056054925 292
310 3300003203 JGI25406J46586_10010428 JGI25406J46586_100104282 293
311 3300005347 Ga0070668_100005060 Ga0070668_1000050608 293
312 3300005844 Ga0068862_100027687 Ga0068862_1000276872 293
313 3300005985 Ga0081539_10000465 Ga0081539_1000046570 293
314 3300028380 Ga0268265_10016172 Ga0268265_100161721 293
315 3300031456 Ga0307513_10038738 Ga0307513_100387383 293
316 3300048929 Ga0496126_0181143 Ga0496126_0181143_635_1531 293
317 3300049824 Ga0501045_0206664 Ga0501045_0206664_85_978 293

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01509

TruB_N

TruB family pseudouridylate synthase (N terminal domain)

73

225

0.99

PF09142

TruB_C

tRNA Pseudouridine synthase II, C terminal

287

342

0.96

PF16198

TruB_C_2

tRNA pseudouridylate synthase B C-terminal domain

226

292

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sgv-assembly1.cif.gz_A structure of trna psi55 pseudouridine synthase (trub) 0.9397 1 293
1sgv-assembly1.cif.gz_A structure of trna psi55 pseudouridine synthase (trub) 0.9363 1 293
1sgv-assembly2.cif.gz_B structure of trna psi55 pseudouridine synthase (trub) 0.9165 1 290
1ze2-assembly1.cif.gz_A conformational change of pseudouridine 55 synthase upon its association with rna substrate 0.9094 3 291
1zl3-assembly1.cif.gz_A coupling of active site motions and rna binding 0.9026 1 292
ID Description Score Start End Superfamily
af_P9WHP7_7_227_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9839 5 219 3.30.2350.10
1s71A02 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4;PUA domain 0.9583 229 291 2.30.130.10
af_B9F4Z0_25_81_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9581 3 54 3.30.2350.10
af_P9WHP7_7_227_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9488 5 219 3.30.2350.10
1s71A01 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9462 5 219 3.30.2350.10
ID Description Score Start End GO Terms
AF-A0A1S2WME6-F1-model_v4 deleted 0.982 4 290
AF-A0A1X1TUJ9-F1-model_v4 tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase) 0.9816 4 290 GO:0003723
GO:0031119
GO:0160148
GO:1990481
AF-A0A1E3R793-F1-model_v4 tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase) 0.9801 1 290 GO:0003723
GO:0031119
GO:0160148
GO:1990481
AF-A0A6I3HN05-F1-model_v4 deleted 0.98 4 158
AF-A0A1H3X031-F1-model_v4 deleted 0.9794 3 290

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pLDDT pTM Quality
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