F403934

General Info

Members Datasets Scaffolds Average Seq Length
316 253 187 265

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2600254933|2600374026
Length 309
Sequence ISHTTEYTYDEPLPYSLQRLRLTPTAGSTQKIINWTVSVDGATVEAGYADQYGNRVELVSSEGGENTIRIVASGEVETVDKAGVFGTHQGFCPLWLFLRETPRTAAGPLVKALAEGLTGDSELARMHGLMETIHETVAYTPGTTTTETTAEEALAAKTGVCQDHTHIFLAAARLRDIPARYVSGYLLMEGTTEQVATHAWAEAHIPGLGWVGFDAANDVCPDERYVRLATGLDYRDAAPISGMRIGRVSETFGENLKVSLTVEDEGQTQAQGSQIQGSQSQSGGQSQSQGGQSQVQGGQSQTTQGQSQS

Samples

Sample ID Description Type Environment
1 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
2 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
3 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
4 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
5 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
6 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
7 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
8 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
9 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
10 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
11 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
12 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
13 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
14 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
15 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
16 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
17 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
18 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
19 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
20 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
21 2643221557 Ensifer sp. Root558 Isolate Unclassified
22 2643221582 Rhizobium sp. Root651 Isolate Unclassified
23 2643221607 Rhizobium sp. Root73 Isolate Unclassified
24 2643221618 Ensifer sp. Root231 Isolate Unclassified
25 2643221626 Ensifer sp. Root31 Isolate Unclassified
26 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
27 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
28 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
29 2643221655 Ensifer sp. Root1252 Isolate Unclassified
30 2643221659 Ensifer sp. Root127 Isolate Unclassified
31 2643221668 Ensifer sp. Root423 Isolate Unclassified
32 2643221675 Ensifer sp. Root1298 Isolate Unclassified
33 2643221680 Ensifer sp. Root1312 Isolate Unclassified
34 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
35 2643221688 Rhizobium sp. Root482 Isolate Unclassified
36 2643221693 Rhizobium sp. Root491 Isolate Unclassified
37 2643221698 Ensifer sp. Root142 Isolate Unclassified
38 2643221712 Ensifer sp. Root258 Isolate Unclassified
39 2643221718 Rhizobium sp. Root268 Isolate Unclassified
40 2643221719 Rhizobium sp. Root274 Isolate Unclassified
41 2643221723 Ensifer sp. Root278 Isolate Unclassified
42 2643221726 Ensifer sp. Root954 Isolate Unclassified
43 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
44 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
45 2751185800 Brucella pituitosa AA2 Isolate Unclassified
46 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
47 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
48 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
49 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
50 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
51 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
52 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
53 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
54 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
55 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
56 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
57 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
58 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
59 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
60 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
61 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
62 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
63 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
64 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
65 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
66 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
67 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
68 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
69 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
70 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
71 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
72 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
73 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
74 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
75 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
76 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
77 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
78 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
79 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
80 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
81 2844163670 Ensifer sp. 1H6 Isolate Unclassified
82 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
83 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
84 2854911287 Brucella lupini LUP21 Isolate Unclassified
85 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
86 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
87 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
88 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
89 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
90 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
91 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
92 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
93 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
94 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
95 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
96 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
97 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
98 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
99 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
100 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
101 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
102 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
103 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
104 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
105 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
106 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
107 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
108 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
109 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
110 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
111 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
112 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
113 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
114 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
115 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
116 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
117 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
118 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
119 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
120 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
121 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
122 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
123 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
124 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
125 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
126 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
127 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
128 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
129 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
130 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
131 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
132 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
133 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
134 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
135 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
136 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
137 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
138 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
139 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
140 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
141 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
142 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
143 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
144 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
145 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
146 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
147 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
148 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
149 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
150 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
151 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
152 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
153 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
154 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
155 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
156 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
157 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
158 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
159 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
160 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
161 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
162 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
163 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
164 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
165 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
166 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
168 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
170 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
173 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
174 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
175 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
176 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
177 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
178 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
179 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
180 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
181 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
182 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
183 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
184 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
185 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
186 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
187 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
188 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
189 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
190 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
191 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
192 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
193 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
194 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
195 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
196 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
197 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
198 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
199 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
200 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
201 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
202 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
203 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
204 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
205 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
206 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
207 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
208 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
209 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
210 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
211 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
212 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
213 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
214 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
215 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
216 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
217 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
218 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
221 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
222 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
223 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
224 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
225 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
226 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
228 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
229 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
230 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
231 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
232 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
233 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
234 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
235 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
236 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
237 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
238 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
239 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
240 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
241 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
242 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
243 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
244 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
245 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
246 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
247 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
248 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
249 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
250 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
251 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
252 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
253 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 58.86
Metatranscriptomes 0.32
Isolates 40.82

Biome Distribution

Category Percentage (%)
Aerial Root 1.58
Bulb 0
Endosphere 19.94
Nodule 9.49
Rhizoplane 3.8
Rhizosphere 30.38
Stem 0
Stem Tuber 0
Unclassified 34.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1001933 3300002739 Bacteria 3494
2 JGI25159J45721_1000004 3300002987 Bacteria 215789
3 JGI25151J46595_10000549 3300003187 Bacteria 34311
4 JGI25151J46595_10030051 3300003187 Bacteria 2142
5 JGI25151J46595_10054374 3300003187 Bacteria 1328
6 rootH2_10192079 3300003320 Bacteria 2711
7 rootH1_10072534 3300003323 Bacteria 4537
8 JGI25160J50197_1000021 3300003354 Bacteria 215789
9 JGI25160J50197_1015883 3300003354 Bacteria 2452
10 Ga0006562J51391_1007500 3300003578 Bacteria 4190
11 Ga0055524_1006166 3300003775 Bacteria 5236
12 Ga0055536_1003213 3300003781 Bacteria 8856
13 Ga0055536_1018428 3300003781 Bacteria 2237
14 Ga0055540_1005531 3300003792 Bacteria 5283
15 Ga0055531_10009712 3300003794 Bacteria 4888
16 Ga0055543_1000102 3300004625 Bacteria 73861
17 Ga0065165_1000033 3300005262 Bacteria 215827
18 Ga0065165_1005801 3300005262 Bacteria 6740
19 Ga0070669_100310956 3300005353 Bacteria 1270
20 Ga0070665_100009102 3300005548 Bacteria 10059
21 Ga0070665_100070290 3300005548 Bacteria 3508
22 Ga0068857_100012114 3300005577 Bacteria 7500
23 Ga0081455_10002518 3300005937 Bacteria 21757
24 Ga0081540_1020941 3300005983 Bacteria 3914
25 Ga0081539_10004404 3300005985 Bacteria 15600
26 Ga0075365_10040702 3300006038 Bacteria 3032
27 Ga0075368_10002196 3300006042 Bacteria 6328
28 Ga0075364_10000091 3300006051 Bacteria 36563
29 Ga0075369_10038716 3300006186 Bacteria 2035
30 Ga0079104_1000015 3300006946 Bacteria 321803
31 Ga0099826_10000462 3300006948 Bacteria 19553
32 Ga0099826_10017022 3300006948 Bacteria 5492
33 Ga0105240_10162220 3300009093 Bacteria 2654
34 Ga0105240_10986267 3300009093 Bacteria 902
35 Ga0157373_10086307 3300013100 Bacteria 2212
36 Ga0157371_10000017 3300013102 Bacteria 320830
37 Ga0157371_10007942 3300013102 Bacteria 8514
38 Ga0157370_10045517 3300013104 Bacteria 4209
39 Ga0157370_10138993 3300013104 Bacteria 2263
40 Ga0157369_10075028 3300013105 Bacteria 3626
41 Ga0157369_10125831 3300013105 Bacteria 2718
42 Ga0171463_1007 3300013249 Bacteria 301198
43 Ga0183363_1071 3300015690 Bacteria 30324
44 Ga0213872_10062692 3300021361 Bacteria 1680
45 Ga0209436_100957 3300025208 Bacteria 11337
46 Ga0209130_1000017 3300025284 Bacteria 388431
47 Ga0209676_1004209 3300025292 Bacteria 8144
48 Ga0209025_1000154 3300025294 Bacteria 170288
49 Ga0209025_1000161 3300025294 Bacteria 166506
50 Ga0209025_1000545 3300025294 Bacteria 70608
51 Ga0209025_1001287 3300025294 Bacteria 34364
52 Ga0209025_1042862 3300025294 Bacteria 1916
53 Ga0209025_1065882 3300025294 Bacteria 1320
54 Ga0209564_1000013 3300025295 Bacteria 775755
55 Ga0209758_1000058 3300025297 Bacteria 331603
56 Ga0209758_1004287 3300025297 Bacteria 12031
57 Ga0209758_1031148 3300025297 Bacteria 2194
58 Ga0209050_1007353 3300025298 Bacteria 6197
59 Ga0209256_1000153 3300025299 Bacteria 144736
60 Ga0209256_1002031 3300025299 Bacteria 17999
61 Ga0207426_1000006 3300025302 Bacteria 1025969
62 Ga0207426_1001790 3300025302 Bacteria 16066
63 Ga0209051_1000785 3300025303 Bacteria 33541
64 Ga0209051_1015183 3300025303 Bacteria 3555
65 Ga0209257_1003706 3300025304 Bacteria 12710
66 Ga0209257_1003777 3300025304 Bacteria 12500
67 Ga0207695_10025498 3300025913 Bacteria 6617
68 Ga0207671_10225476 3300025914 Bacteria 1469
69 Ga0207681_10302395 3300025923 Bacteria 1266
70 Ga0207639_10033949 3300026041 Bacteria 3768
71 Ga0207678_10261779 3300026067 Bacteria 1482
72 Ga0207674_10054411 3300026116 Bacteria 4074
73 Ga0209281_1000068 3300027111 Bacteria 280238
74 Ga0209371_1000022 3300027312 Bacteria 536342
75 Ga0209371_1000341 3300027312 Bacteria 50975
76 Ga0209282_1001698 3300027666 Bacteria 12281
77 Ga0268266_10007279 3300028379 Bacteria 10008
78 Ga0307515_10000017 3300028794 Bacteria 550465
79 Ga0307515_10006213 3300028794 Bacteria 23994
80 Ga0268256_1000019 3300030500 Bacteria 587949
81 Ga0268256_1002662 3300030500 Bacteria 8808
82 Ga0307513_10001095 3300031456 Bacteria 39184
83 Ga0307412_10118926 3300031911 Bacteria 1899
84 Ga0307414_10337193 3300032004 Bacteria 1289
85 Ga0395899_0001350 3300037312 Bacteria 21128
86 Ga0395900_0003263 3300037418 Bacteria 17573
87 Ga0395898_0003486 3300037466 Bacteria 17573
88 Ga0395905_0001566 3300037471 Bacteria 27315
89 Ga0395905_0003218 3300037471 Bacteria 17573
90 Ga0395901_0002823 3300038443 Bacteria 17545
91 Ga0436361_0094032 3300039447 Bacteria 6489
92 Ga0439431_0037480 3300041997 Bacteria 1224
93 Ga0466965_0041058 3300044683 Bacteria 2279
94 Ga0495638_0029720 3300046460 Bacteria 3523
95 Ga0495580_0007226 3300046472 Bacteria 8933
96 Ga0495610_0009174 3300046512 Bacteria 6284
97 Ga0495616_0000187 3300046513 Bacteria 51726
98 Ga0495643_0106107 3300046522 Bacteria 1434
99 Ga0495654_0001062 3300046530 Bacteria 20101
100 Ga0495633_0029358 3300046558 Bacteria 2676
101 Ga0495668_0061728 3300046616 Bacteria 2067
102 Ga0495625_0080789 3300046660 Bacteria 2264
103 Ga0495588_0028489 3300046674 Bacteria 2795
104 Ga0495671_0051175 3300046692 Bacteria 2055
105 Ga0495672_0032875 3300047320 Bacteria 3220
106 Ga0495673_0110601 3300047469 Bacteria 1099
107 Ga0495681_0014467 3300047470 Bacteria 4519
108 Ga0496104_0117879 3300048907 Bacteria 2548
109 Ga0496111_0026694 3300048914 Bacteria 4079
110 Ga0496113_0066286 3300048916 Bacteria 2734
111 Ga0496116_0000105 3300048919 Bacteria 192704
112 Ga0496116_0011861 3300048919 Bacteria 7171
113 Ga0496117_0000002 3300048920 Bacteria 2483758
114 Ga0496117_0035242 3300048920 Bacteria 3759
115 Ga0496117_0039332 3300048920 Bacteria 3492
116 Ga0496118_0001193 3300048921 Bacteria 40048
117 Ga0496118_0084440 3300048921 Bacteria 2215
118 Ga0496119_0005864 3300048922 Bacteria 11594
119 Ga0496119_0013393 3300048922 Bacteria 6541
120 Ga0496119_0016585 3300048922 Bacteria 5595
121 Ga0496119_0129600 3300048922 Bacteria 1376
122 Ga0496120_0000309 3300048923 Bacteria 81375
123 Ga0496120_0060283 3300048923 Bacteria 2123
124 Ga0496121_0003150 3300048924 Bacteria 23794
125 Ga0496121_0014213 3300048924 Bacteria 8470
126 Ga0496122_0000004 3300048925 Bacteria 645283
127 Ga0496122_0000414 3300048925 Bacteria 90664
128 Ga0496122_0000462 3300048925 Bacteria 84546
129 Ga0496122_0015298 3300048925 Bacteria 7342
130 Ga0496122_0020095 3300048925 Bacteria 6063
131 Ga0496122_0020805 3300048925 Bacteria 5905
132 Ga0496122_0027651 3300048925 Bacteria 4841
133 Ga0496122_0051391 3300048925 Bacteria 3132
134 Ga0496123_0000007 3300048926 Bacteria 645283
135 Ga0496123_0000048 3300048926 Bacteria 244152
136 Ga0496123_0000839 3300048926 Bacteria 49128
137 Ga0496123_0035076 3300048926 Bacteria 3581
138 Ga0496123_0058267 3300048926 Bacteria 2507
139 Ga0496123_0081311 3300048926 Bacteria 1969
140 Ga0496124_0000067 3300048927 Bacteria 222576
141 Ga0496124_0000348 3300048927 Bacteria 84728
142 Ga0496124_0004618 3300048927 Bacteria 15949
143 Ga0496125_0004265 3300048928 Bacteria 16639
144 Ga0496125_0023661 3300048928 Bacteria 5665
145 Ga0496125_0032711 3300048928 Bacteria 4615
146 Ga0496125_0113065 3300048928 Bacteria 1959
147 Ga0496126_0000188 3300048929 Bacteria 139625
148 Ga0496126_0000780 3300048929 Bacteria 57510
149 Ga0496126_0107259 3300048929 Bacteria 2436
150 Ga0496126_0317187 3300048929 Bacteria 1282
151 Ga0495678_071877 3300049459 Bacteria 1266
152 Ga0501031_0029419 3300049568 Bacteria 3583
153 Ga0501032_0065289 3300049569 Bacteria 2434
154 Ga0501033_0000410 3300049570 Bacteria 40976
155 Ga0501033_0062937 3300049570 Bacteria 2731
156 Ga0501037_0048174 3300049573 Bacteria 3123
157 Ga0501038_0150698 3300049574 Bacteria 1896
158 Ga0501043_0081581 3300049579 Bacteria 2541
159 Ga0501080_0081803 3300049742 Bacteria 3000
160 Ga0501241_012897 3300049758 Bacteria 1518
161 Ga0501035_0002864 3300049822 Bacteria 16661
162 Ga0501044_0173237 3300049823 Bacteria 2128
163 Ga0501044_0205264 3300049823 Bacteria 1927
164 Ga0501044_0452205 3300049823 Bacteria 1191
165 nmdc:mga00v17_156_c1 3300050491 Bacteria 40197
166 nmdc:mga00v17_7_c1 3300050491 Bacteria 167228
167 nmdc:mga0yw44_3733_c1 3300050492 Bacteria 6820
168 nmdc:mga0yw44_64433_c1 3300050492 Bacteria 2256
169 nmdc:mga0k408_38110_c1 3300050493 Bacteria 2760
170 nmdc:mga06z11_57400_c1 3300050494 Bacteria 2017
171 nmdc:mga0sz30_139792_c1 3300050516 Bacteria 1069
172 nmdc:mga0sz30_313_c1 3300050516 Bacteria 18658
173 Ga0500644_0002114 3300053088 Bacteria 5042
174 Ga0500560_064346 3300053107 Bacteria 1200
175 Ga0500572_005433 3300053111 Bacteria 2886
176 Ga0500618_000631 3300053125 Bacteria 21288
177 Ga0500561_0000333 3300053137 Bacteria 7873
178 Ga0500573_0040927 3300053140 Bacteria 2675
179 Ga0500573_0065438 3300053140 Bacteria 2078
180 Ga0500616_0001671 3300053153 Bacteria 20448
181 Ga0500622_0000241 3300053156 Bacteria 56799
182 Ga0500624_006669 3300053157 Bacteria 1567
183 Ga0500627_0000595 3300053158 Bacteria 9704
184 Ga0500634_0023543 3300053161 Bacteria 3347
185 Ga0500634_0031182 3300053161 Bacteria 2906
186 Ga0500636_0000003 3300053177 Bacteria 240189
187 Ga0590075_033265 3300059424 Bacteria 1309

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048925 Ga0496122_0020095 Ga0496122_0020095_19_756 213
2 3300013105 Ga0157369_10075028 Ga0157369_100750283 234
3 3300026041 Ga0207639_10033949 Ga0207639_100339494 235
4 3300013104 Ga0157370_10138993 Ga0157370_101389932 236
5 3300005985 Ga0081539_10004404 Ga0081539_100044046 246
6 3300048914 Ga0496111_0026694 Ga0496111_0026694_2104_2952 248
7 3300048926 Ga0496123_0035076 Ga0496123_0035076_1034_1876 248
8 3300006946 Ga0079104_1000015 Ga0079104_1000015109 249
9 3300027111 Ga0209281_1000068 Ga0209281_1000068276 249
10 3300046660 Ga0495625_0080789 Ga0495625_0080789_1352_2179 249
11 3300049459 Ga0495678_071877 Ga0495678_071877_332_1159 249
12 3300053125 Ga0500618_000631 Ga0500618_000631_1753_2580 249
13 iso_pu_bacteria 2891373044 2891373644 252
14 iso_pu_bacteria 2989349275 2989350122 252
15 3300046460 Ga0495638_0029720 Ga0495638_0029720_1212_2045 253
16 iso_pu_bacteria 2501025504 2501408973 253
17 iso_pu_bacteria 2510461069 2510840589 253
18 iso_pu_bacteria 2510917014 2511098669 253
19 iso_pu_bacteria 2510917026 2511172060 253
20 iso_pu_bacteria 2511231027 2511389619 253
21 iso_pu_bacteria 2554235003 2554248459 253
22 iso_pu_bacteria 2558860242 2559295575 253
23 iso_pu_bacteria 2558860983 2561469493 253
24 iso_pu_bacteria 2582581283 2585167511 253
25 iso_pu_bacteria 2582581306 2585265737 253
26 iso_pu_bacteria 2582581865 2585388943 253
27 iso_pu_bacteria 2582581866 2585395364 253
28 iso_pu_bacteria 2585427633 2585996781 253
29 iso_pu_bacteria 2585427634 2586001366 253
30 iso_pu_bacteria 2599185156 2599332051 253
31 iso_pu_bacteria 2599185210 2599601898 253
32 iso_pu_bacteria 2599185236 2599721737 253
33 iso_pu_bacteria 2599185352 2600194905 253
34 iso_pu_bacteria 2600254933 2600374026 253
35 iso_pu_bacteria 2600255308 2601746623 253
36 iso_pu_bacteria 2643221557 2643804137 253
37 iso_pu_bacteria 2643221582 2643920107 253
38 iso_pu_bacteria 2643221607 2644050167 253
39 iso_pu_bacteria 2643221618 2644105201 253
40 iso_pu_bacteria 2643221626 2644145723 253
41 iso_pu_bacteria 2643221636 2644204772 253
42 iso_pu_bacteria 2643221637 2644208739 253
43 iso_pu_bacteria 2643221653 2644298989 253
44 iso_pu_bacteria 2643221655 2644309614 253
45 iso_pu_bacteria 2643221659 2644331218 253
46 iso_pu_bacteria 2643221668 2644376502 253
47 iso_pu_bacteria 2643221675 2644416760 253
48 iso_pu_bacteria 2643221680 2644449800 253
49 iso_pu_bacteria 2643221686 2644483087 253
50 iso_pu_bacteria 2643221688 2644494259 253
51 iso_pu_bacteria 2643221693 2644521730 253
52 iso_pu_bacteria 2643221698 2644543343 253
53 iso_pu_bacteria 2643221712 2644616138 253
54 iso_pu_bacteria 2643221718 2644652269 253
55 iso_pu_bacteria 2643221719 2644657217 253
56 iso_pu_bacteria 2643221723 2644675764 253
57 iso_pu_bacteria 2643221726 2644689932 253
58 iso_pu_bacteria 2713897090 2715499353 253
59 iso_pu_bacteria 2738541317 2738944163 253
60 iso_pu_bacteria 2751185800 2753358226 253
61 iso_pu_bacteria 2757320392 2757570959 253
62 iso_pu_bacteria 2758568016 2758638997 253
63 iso_pu_bacteria 2765235802 2765464865 253
64 iso_pu_bacteria 2767802442 2770195209 253
65 iso_pu_bacteria 2775506902 2776270890 253
66 iso_pu_bacteria 2775506904 2776282780 253
67 iso_pu_bacteria 2791355253 2793280059 253
68 iso_pu_bacteria 2808606387 2808987692 253
69 iso_pu_bacteria 2818991272 2819240999 253
70 iso_pu_bacteria 2818991439 2819559291 253
71 iso_pu_bacteria 2818991461 2819685339 253
72 iso_pu_bacteria 2821123053 2821125854 253
73 iso_pu_bacteria 2821443989 2821449269 253
74 iso_pu_bacteria 2838675328 2838675537 253
75 iso_pu_bacteria 2838714209 2838714418 253
76 iso_pu_bacteria 2838719591 2838721780 253
77 iso_pu_bacteria 2838724970 2838725179 253
78 iso_pu_bacteria 2838736955 2838737697 253
79 iso_pu_bacteria 2839993093 2839994788 253
80 iso_pu_bacteria 2840764183 2840767653 253
81 iso_pu_bacteria 2841840854 2841841934 253
82 iso_pu_bacteria 2841846520 2841848763 253
83 iso_pu_bacteria 2841859092 2841862365 253
84 iso_pu_bacteria 2842124991 2842125206 253
85 iso_pu_bacteria 2842130223 2842130432 253
86 iso_pu_bacteria 2842140634 2842141713 253
87 iso_pu_bacteria 2842152218 2842154398 253
88 iso_pu_bacteria 2842170452 2842170661 253
89 iso_pu_bacteria 2842175837 2842178018 253
90 iso_pu_bacteria 2842187318 2842187527 253
91 iso_pu_bacteria 2842211629 2842211838 253
92 iso_pu_bacteria 2842224351 2842226542 253
93 iso_pu_bacteria 2842515876 2842519149 253
94 iso_pu_bacteria 2842871566 2842871715 253
95 iso_pu_bacteria 2842922631 2842924386 253
96 iso_pu_bacteria 2844163670 2844163958 253
97 iso_pu_bacteria 2844533157 2844535330 253
98 iso_pu_bacteria 2854896431 2854901445 253
99 iso_pu_bacteria 2854911287 2854916683 253
100 iso_pu_bacteria 2854916844 2854918944 253
101 iso_pu_bacteria 2857531043 2857532415 253
102 iso_pu_bacteria 2891048133 2891051243 253
103 iso_pu_bacteria 2894652903 2894656223 253
104 iso_pu_bacteria 2896384573 2896391151 253
105 iso_pu_bacteria 2899792073 2899795547 253
106 iso_pu_bacteria 2899845264 2899848835 253
107 iso_pu_bacteria 2904578770 2904580856 253
108 iso_pu_bacteria 2913308742 2913308782 253
109 iso_pu_bacteria 2919114240 2919114455 253
110 iso_pu_bacteria 2919119836 2919121429 253
111 iso_pu_bacteria 2919166419 2919169558 253
112 iso_pu_bacteria 2919171160 2919173074 253
113 iso_pu_bacteria 2920760137 2920761256 253
114 iso_pu_bacteria 2920822456 2920825545 253
115 iso_pu_bacteria 2926754445 2926755469 253
116 iso_pu_bacteria 2926760298 2926762601 253
117 iso_pu_bacteria 2928521798 2928523652 253
118 iso_pu_bacteria 2933006813 2933009043 253
119 iso_pu_bacteria 2933011516 2933014677 253
120 iso_pu_bacteria 2933594066 2933596359 253
121 iso_pu_bacteria 2941499720 2941504671 253
122 iso_pu_bacteria 2954011201 2954015935 253
123 iso_pu_bacteria 2978969890 2978971962 253
124 iso_pu_bacteria 2979089926 2979092089 253
125 iso_pu_bacteria 2979095461 2979100523 253
126 iso_pu_bacteria 2979100975 2979104146 253
127 iso_pu_bacteria 2984509177 2984511284 253
128 iso_pu_bacteria 2984518228 2984522355 253
129 iso_pu_bacteria 2984537506 2984541657 253
130 iso_pu_bacteria 2984587000 2984590246 253
131 iso_pu_bacteria 2984601300 2984603930 253
132 iso_pu_bacteria 2989776772 2989779558 253
133 iso_pu_bacteria 2995392953 2995396547 253
134 iso_pu_bacteria 3002141150 3002144454 253
135 iso_pu_bacteria 650716007 650740784 253
136 iso_pu_bacteria 8003570095 8003571860 253
137 iso_pu_bacteria 8005246636 8005249837 253
138 iso_pu_bacteria 8005658619 8005658789 253
139 iso_pu_bacteria 8018150411 8018151267 253
140 iso_pu_bacteria 8054558443 8054561962 253
141 iso_pu_bacteria 8055431914 8055432347 253
142 iso_pu_bacteria 8056875544 8056875861 253
143 3300009093 Ga0105240_10162220 Ga0105240_101622204 254
144 3300009093 Ga0105240_10986267 Ga0105240_109862671 254
145 3300013102 Ga0157371_10007942 Ga0157371_1000794210 254
146 3300013105 Ga0157369_10125831 Ga0157369_101258312 254
147 3300025913 Ga0207695_10025498 Ga0207695_100254985 254
148 3300025914 Ga0207671_10225476 Ga0207671_102254762 254
149 3300025294 Ga0209025_1065882 Ga0209025_10658822 255
150 3300026067 Ga0207678_10261779 Ga0207678_102617792 255
151 3300048919 Ga0496116_0000105 Ga0496116_0000105_112241_113062 255
152 3300048925 Ga0496122_0051391 Ga0496122_0051391_1018_1839 255
153 3300048926 Ga0496123_0058267 Ga0496123_0058267_1375_2196 255
154 3300048929 Ga0496126_0000780 Ga0496126_0000780_1810_2631 255
155 3300003187 JGI25151J46595_10000549 JGI25151J46595_1000054910 256
156 3300003187 JGI25151J46595_10030051 JGI25151J46595_100300513 256
157 3300003320 rootH2_10192079 rootH2_101920793 256
158 3300003354 JGI25160J50197_1015883 JGI25160J50197_10158832 256
159 3300005983 Ga0081540_1020941 Ga0081540_10209412 256
160 3300013100 Ga0157373_10086307 Ga0157373_100863071 256
161 3300025294 Ga0209025_1000154 Ga0209025_100015473 256
162 3300025294 Ga0209025_1000545 Ga0209025_100054520 256
163 3300025294 Ga0209025_1001287 Ga0209025_100128710 256
164 3300025297 Ga0209758_1004287 Ga0209758_10042873 256
165 3300025302 Ga0207426_1001790 Ga0207426_100179014 256
166 3300027312 Ga0209371_1000022 Ga0209371_1000022318 256
167 3300030500 Ga0268256_1000019 Ga0268256_1000019202 256
168 3300037471 Ga0395905_0001566 Ga0395905_0001566_3132_3929 256
169 3300041997 Ga0439431_0037480 Ga0439431_0037480_86_910 256
170 3300046472 Ga0495580_0007226 Ga0495580_0007226_8078_8914 256
171 3300046512 Ga0495610_0009174 Ga0495610_0009174_3099_3923 256
172 3300048920 Ga0496117_0039332 Ga0496117_0039332_556_1377 256
173 3300048922 Ga0496119_0129600 Ga0496119_0129600_531_1352 256
174 3300048925 Ga0496122_0000414 Ga0496122_0000414_69399_70220 256
175 3300048926 Ga0496123_0000839 Ga0496123_0000839_1868_2689 256
176 3300048927 Ga0496124_0000348 Ga0496124_0000348_75559_76380 256
177 3300048928 Ga0496125_0032711 Ga0496125_0032711_2693_3514 256
178 3300048929 Ga0496126_0000188 Ga0496126_0000188_59468_60289 256
179 3300048929 Ga0496126_0107259 Ga0496126_0107259_263_1087 256
180 3300049568 Ga0501031_0029419 Ga0501031_0029419_910_1731 256
181 3300049569 Ga0501032_0065289 Ga0501032_0065289_157_978 256
182 3300049570 Ga0501033_0062937 Ga0501033_0062937_386_1207 256
183 3300049573 Ga0501037_0048174 Ga0501037_0048174_1804_2625 256
184 3300049574 Ga0501038_0150698 Ga0501038_0150698_98_919 256
185 3300049579 Ga0501043_0081581 Ga0501043_0081581_1159_1980 256
186 3300049742 Ga0501080_0081803 Ga0501080_0081803_216_1013 256
187 3300049823 Ga0501044_0205264 Ga0501044_0205264_204_1025 256
188 3300049823 Ga0501044_0452205 Ga0501044_0452205_79_876 256
189 3300053088 Ga0500644_0002114 Ga0500644_0002114_3283_4074 256
190 3300053111 Ga0500572_005433 Ga0500572_005433_1622_2443 256
191 3300053156 Ga0500622_0000241 Ga0500622_0000241_7318_8109 256
192 3300053161 Ga0500634_0031182 Ga0500634_0031182_1809_2633 256
193 3300002739 JGI25158J39367_1001933 JGI25158J39367_10019331 257
194 3300002987 JGI25159J45721_1000004 JGI25159J45721_10000044 257
195 3300003187 JGI25151J46595_10054374 JGI25151J46595_100543742 257
196 3300003323 rootH1_10072534 rootH1_100725346 257
197 3300003354 JGI25160J50197_1000021 JGI25160J50197_1000021205 257
198 3300003578 Ga0006562J51391_1007500 Ga0006562J51391_10075003 257
199 3300003775 Ga0055524_1006166 Ga0055524_10061663 257
200 3300003781 Ga0055536_1003213 Ga0055536_10032133 257
201 3300003781 Ga0055536_1018428 Ga0055536_10184282 257
202 3300003792 Ga0055540_1005531 Ga0055540_10055313 257
203 3300003794 Ga0055531_10009712 Ga0055531_100097123 257
204 3300004625 Ga0055543_1000102 Ga0055543_10001024 257
205 3300005262 Ga0065165_1000033 Ga0065165_1000033205 257
206 3300005262 Ga0065165_1005801 Ga0065165_10058014 257
207 3300005353 Ga0070669_100310956 Ga0070669_1003109562 257
208 3300005548 Ga0070665_100009102 Ga0070665_1000091027 257
209 3300005548 Ga0070665_100070290 Ga0070665_1000702904 257
210 3300005577 Ga0068857_100012114 Ga0068857_1000121143 257
211 3300005937 Ga0081455_10002518 Ga0081455_100025185 257
212 3300006038 Ga0075365_10040702 Ga0075365_100407022 257
213 3300006042 Ga0075368_10002196 Ga0075368_100021965 257
214 3300006051 Ga0075364_10000091 Ga0075364_100000913 257
215 3300006186 Ga0075369_10038716 Ga0075369_100387161 257
216 3300006948 Ga0099826_10000462 Ga0099826_100004627 257
217 3300006948 Ga0099826_10017022 Ga0099826_100170224 257
218 3300013102 Ga0157371_10000017 Ga0157371_10000017290 257
219 3300013104 Ga0157370_10045517 Ga0157370_100455173 257
220 3300013249 Ga0171463_1007 Ga0171463_1007104 257
221 3300015690 Ga0183363_1071 Ga0183363_107127 257
222 3300021361 Ga0213872_10062692 Ga0213872_100626922 257
223 3300025208 Ga0209436_100957 Ga0209436_1009578 257
224 3300025284 Ga0209130_1000017 Ga0209130_1000017179 257
225 3300025292 Ga0209676_1004209 Ga0209676_10042096 257
226 3300025294 Ga0209025_1000161 Ga0209025_10001614 257
227 3300025294 Ga0209025_1042862 Ga0209025_10428622 257
228 3300025295 Ga0209564_1000013 Ga0209564_1000013627 257
229 3300025297 Ga0209758_1000058 Ga0209758_1000058164 257
230 3300025297 Ga0209758_1031148 Ga0209758_10311484 257
231 3300025298 Ga0209050_1007353 Ga0209050_10073535 257
232 3300025299 Ga0209256_1000153 Ga0209256_1000153139 257
233 3300025299 Ga0209256_1002031 Ga0209256_100203117 257
234 3300025302 Ga0207426_1000006 Ga0207426_1000006178 257
235 3300025303 Ga0209051_1000785 Ga0209051_100078528 257
236 3300025303 Ga0209051_1015183 Ga0209051_10151832 257
237 3300025304 Ga0209257_1003706 Ga0209257_10037064 257
238 3300025304 Ga0209257_1003777 Ga0209257_10037776 257
239 3300025923 Ga0207681_10302395 Ga0207681_103023952 257
240 3300026116 Ga0207674_10054411 Ga0207674_100544112 257
241 3300027312 Ga0209371_1000341 Ga0209371_100034130 257
242 3300027666 Ga0209282_1001698 Ga0209282_10016987 257
243 3300028379 Ga0268266_10007279 Ga0268266_100072794 257
244 3300028794 Ga0307515_10000017 Ga0307515_10000017156 257
245 3300028794 Ga0307515_10006213 Ga0307515_1000621324 257
246 3300030500 Ga0268256_1002662 Ga0268256_10026627 257
247 3300031456 Ga0307513_10001095 Ga0307513_100010956 257
248 3300031911 Ga0307412_10118926 Ga0307412_101189262 257
249 3300032004 Ga0307414_10337193 Ga0307414_103371932 257
250 3300037312 Ga0395899_0001350 Ga0395899_0001350_1080_1874 257
251 3300037418 Ga0395900_0003263 Ga0395900_0003263_1104_1898 257
252 3300037466 Ga0395898_0003486 Ga0395898_0003486_1104_1898 257
253 3300037471 Ga0395905_0003218 Ga0395905_0003218_15676_16470 257
254 3300038443 Ga0395901_0002823 Ga0395901_0002823_1104_1898 257
255 3300039447 Ga0436361_0094032 Ga0436361_0094032_5024_5860 257
256 3300044683 Ga0466965_0041058 Ga0466965_0041058_481_1329 257
257 3300046513 Ga0495616_0000187 Ga0495616_0000187_12214_13083 257
258 3300046522 Ga0495643_0106107 Ga0495643_0106107_166_981 257
259 3300046530 Ga0495654_0001062 Ga0495654_0001062_1862_2716 257
260 3300046558 Ga0495633_0029358 Ga0495633_0029358_1482_2303 257
261 3300046616 Ga0495668_0061728 Ga0495668_0061728_216_1085 257
262 3300046674 Ga0495588_0028489 Ga0495588_0028489_334_1155 257
263 3300046692 Ga0495671_0051175 Ga0495671_0051175_1027_1848 257
264 3300047320 Ga0495672_0032875 Ga0495672_0032875_1418_2230 257
265 3300047469 Ga0495673_0110601 Ga0495673_0110601_145_957 257
266 3300047470 Ga0495681_0014467 Ga0495681_0014467_1807_2628 257
267 3300048907 Ga0496104_0117879 Ga0496104_0117879_1247_2068 257
268 3300048916 Ga0496113_0066286 Ga0496113_0066286_1357_2172 257
269 3300048919 Ga0496116_0011861 Ga0496116_0011861_4566_5381 257
270 3300048920 Ga0496117_0000002 Ga0496117_0000002_226034_226849 257
271 3300048920 Ga0496117_0035242 Ga0496117_0035242_54_875 257
272 3300048921 Ga0496118_0001193 Ga0496118_0001193_24120_24935 257
273 3300048921 Ga0496118_0084440 Ga0496118_0084440_1182_2003 257
274 3300048922 Ga0496119_0005864 Ga0496119_0005864_8602_9417 257
275 3300048922 Ga0496119_0013393 Ga0496119_0013393_1256_2053 257
276 3300048922 Ga0496119_0016585 Ga0496119_0016585_2371_3192 257
277 3300048923 Ga0496120_0000309 Ga0496120_0000309_5586_6401 257
278 3300048923 Ga0496120_0060283 Ga0496120_0060283_1273_2070 257
279 3300048924 Ga0496121_0003150 Ga0496121_0003150_21096_21950 257
280 3300048924 Ga0496121_0014213 Ga0496121_0014213_5680_6501 257
281 3300048925 Ga0496122_0000004 Ga0496122_0000004_418827_419642 257
282 3300048925 Ga0496122_0000462 Ga0496122_0000462_59669_60517 257
283 3300048925 Ga0496122_0015298 Ga0496122_0015298_6010_6807 257
284 3300048925 Ga0496122_0020805 Ga0496122_0020805_1227_2024 257
285 3300048925 Ga0496122_0027651 Ga0496122_0027651_1427_2242 257
286 3300048926 Ga0496123_0000007 Ga0496123_0000007_418827_419642 257
287 3300048926 Ga0496123_0000048 Ga0496123_0000048_24030_24878 257
288 3300048926 Ga0496123_0081311 Ga0496123_0081311_688_1485 257
289 3300048927 Ga0496124_0000067 Ga0496124_0000067_124638_125459 257
290 3300048927 Ga0496124_0004618 Ga0496124_0004618_10902_11717 257
291 3300048928 Ga0496125_0004265 Ga0496125_0004265_13239_14036 257
292 3300048928 Ga0496125_0023661 Ga0496125_0023661_4803_5624 257
293 3300048928 Ga0496125_0113065 Ga0496125_0113065_521_1336 257
294 3300048929 Ga0496126_0317187 Ga0496126_0317187_400_1248 257
295 3300049570 Ga0501033_0000410 Ga0501033_0000410_1854_2690 257
296 3300049758 Ga0501241_012897 Ga0501241_012897_670_1500 257
297 3300049822 Ga0501035_0002864 Ga0501035_0002864_1616_2452 257
298 3300049823 Ga0501044_0173237 Ga0501044_0173237_1188_1982 257
299 3300050491 nmdc:mga00v17_156_c1 nmdc:mga00v17_156_c1_34266_35117 257
300 3300050491 nmdc:mga00v17_7_c1 nmdc:mga00v17_7_c1_44104_44919 257
301 3300050492 nmdc:mga0yw44_3733_c1 nmdc:mga0yw44_3733_c1_253_1101 257
302 3300050492 nmdc:mga0yw44_64433_c1 nmdc:mga0yw44_64433_c1_75_890 257
303 3300050493 nmdc:mga0k408_38110_c1 nmdc:mga0k408_38110_c1_1093_1908 257
304 3300050494 nmdc:mga06z11_57400_c1 nmdc:mga06z11_57400_c1_1018_1833 257
305 3300050516 nmdc:mga0sz30_139792_c1 nmdc:mga0sz30_139792_c1_185_1006 257
306 3300050516 nmdc:mga0sz30_313_c1 nmdc:mga0sz30_313_c1_11896_12711 257
307 3300053107 Ga0500560_064346 Ga0500560_064346_61_882 257
308 3300053137 Ga0500561_0000333 Ga0500561_0000333_5015_5830 257
309 3300053140 Ga0500573_0040927 Ga0500573_0040927_1572_2390 257
310 3300053140 Ga0500573_0065438 Ga0500573_0065438_888_1706 257
311 3300053153 Ga0500616_0001671 Ga0500616_0001671_18184_19011 257
312 3300053157 Ga0500624_006669 Ga0500624_006669_424_1245 257
313 3300053158 Ga0500627_0000595 Ga0500627_0000595_7294_8163 257
314 3300053161 Ga0500634_0023543 Ga0500634_0023543_2295_3116 257
315 3300053177 Ga0500636_0000003 Ga0500636_0000003_2714_3535 257
316 3300059424 Ga0590075_033265 Ga0590075_033265_115_963 257

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08379

Bact_transglu_N

Bacterial transglutaminase-like N-terminal region

1

77

0.96

PF01841

Transglut_core

Transglutaminase-like superfamily

111

215

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f4o-assembly1.cif.gz_A the mouse pngase-hr23 complex reveals a complete remodulation of the protein-protein interface compared to its yeast orthologs 0.8211 153 224
4b55-assembly1.cif.gz_A crystal structure of the covalent adduct formed between mycobacterium marinum aryalamine n-acetyltransferase and phenyl vinyl ketone a derivative of piperidinols 0.764 122 219
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.7564 1 257
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.7537 1 257
4nv7-assembly3.cif.gz_B crystal structure of mesorhizobium loti arylamine n-acetyltransferase 1 in complex with coa 0.7406 116 211
ID Description Score Start End Superfamily
af_P9WL93_122_301_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.9068 98 251 3.10.620.30
af_Q50732_135_318_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8746 98 250 3.10.620.30
af_P71734_77_269_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8249 81 251 3.10.620.30
af_I6XWA9_2_176_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.801 95 219 3.10.620.30
af_Q556I6_323_487_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.7968 91 220 3.10.620.30
ID Description Score Start End GO Terms
AF-A0A6N7LBT4-F1-model_v4 Transglutaminase family protein 0.9922 1 257
AF-A0A6N7LBT4-F1-model_v4 Transglutaminase family protein 0.9883 1 257
AF-A0A2P8NJV7-F1-model_v4 Transglutaminase 0.985 1 256
AF-A0A292GQ12-F1-model_v4 Transglutaminase domain-containing protein 0.9844 1 256
AF-A3W544-F1-model_v4 Transglutaminase-like domain-containing protein 0.9834 1 256

Feature Viewer

pLDDT pTM Quality
92.3 0.91 High
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Predicted Structure (AlphaFold2)

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