F403805

General Info

Members Datasets Scaffolds Average Seq Length
316 176 312 838

Family's Representative Sequence

Representative Sequence 3300044656|Ga0466969_0000423|Ga0466969_0000423_19409_22360
Length 983
Sequence MQLVSLVQRAALVWVTLAVVAGNSVARADPDATLRHFDIQSGGAALGLKEFARQADISLVFSSTLVANRQTSALRGDFTVAEGLRKLLDGSGLSFKQVSATTIAINAASESTQRRDPPGSGPAAERPVRDEPSTKGETNMTHRGFFTRMASLLALTGAALGGHAYAQDTSTEATPVVDASTANTNNLAEVVVTGTATAGGVKKLDASFEITTASLEEIRNAQPTSAADLLKIVPGVWAESSSGQTGANIELSGFPGGGDAPYVTFQINGSPLFPASGGISFMDNSSLFRIDETIERAEVLQGGPGVVYSNGQLGATANFILREGTAEPHGDIGLTVGTDHGYRVDGFYGGPLAQDWLISVGGFYRYSQGVRDSQFPADNGGQLTGTLSHKWDAGKILFFARVLNDKNLFITDIPVTVSGNGKDQSVSAFPGFDPNHGTFAGDGLRGISVQESPTGPPVTADLSKGRGSSLHFFGNDLDVQINDTIALSNRLMYVGGEVDCYCLFNNFAPQTLSSFAAAQTATANGNPAITGPYGAATGYAATLVSTGAAVDPNSYVASLGFWIVQKQIQAFTDDMRFSFDLFHGNTLTVGGYLAAYSSDDRWWLGNNELVTATPNAQLIDLTLNNGVNVTNNAGLLGASFFTLNENWTGLNTALFVSDSWKWGPWLFDAGYRIEEQKDHGTIENDTATDLDNNPRNLYNKGVSVPNGTFNQGANCDTSGGKECTEFRHTLGSWALGANYELTPNMSVFGRINQGVHFPGFDDLRSGQPQTQKINNYEVGFRAQTQTIYGVVDVFRRKFTGVPFQQFTAAGSQVTATYGASSYGINVQGQWHPIQPFTLDISGDWVHAVYTSYASATSGGADYSGNTLQRQPRLQFRITPSYEVPLELVDLRFFATYSHVGLRYEDIANQQILPEYYTLDAGAVAEIGKNFEVRLQGTNLTNQIGLTEGNARIALGSGSGIVNNFEMARPIFGRQVTLQLRYKF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
3 2739367700 Dyella sp. YR388 Isolate Unclassified
4 2884411467 Dyella sp. AD56 Isolate Rhizosphere
5 2928963466 Dyella japonica 1073 Isolate Unclassified
6 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
7 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
8 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
9 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
10 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
11 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
12 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
13 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
14 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
17 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
18 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
19 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
20 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
21 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
22 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
23 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
24 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
27 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
28 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
29 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
30 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
31 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
32 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
33 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
34 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
35 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
36 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
37 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
38 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
39 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
40 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
49 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
50 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
51 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
52 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
56 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
57 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
58 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
59 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
60 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
61 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
62 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
65 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
66 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
82 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
83 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
84 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
90 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
91 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
93 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
96 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
97 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
98 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
129 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
132 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
133 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
134 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
135 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
136 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
139 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
140 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
143 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
144 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
145 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
146 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
147 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
148 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
149 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
150 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
151 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
152 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
153 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
154 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
155 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.47
Metatranscriptomes 1.27
Isolates 1.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.42
Nodule 0
Rhizoplane 1.9
Rhizosphere 62.97
Stem 0
Stem Tuber 0
Unclassified 11.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1943480 2162886007 Bacteria 4784
2 JGI24740J21852_10004642 3300001979 Bacteria 5894
3 JGI24739J22299_10001186 3300001989 Bacteria 9759
4 JGI24735J21928_10001527 3300002067 Bacteria 8204
5 JGI25156J39149_1001356 3300002705 Bacteria 10502
6 JGI25162J39368_1001100 3300002737 Bacteria 16411
7 JGI25162J39368_1001302 3300002737 Bacteria 14095
8 JGI25162J39368_1002170 3300002737 Bacteria 8165
9 JGI25157J39369_1000433 3300002741 Bacteria 27238
10 JGI25157J39369_1000830 3300002741 Bacteria 15326
11 JGI25157J39369_1001902 3300002741 Bacteria 6363
12 JGI25163J39215_1000233 3300002771 Bacteria 20699
13 JGI25164J39214_1000030 3300002772 Bacteria 145974
14 JGI25164J39214_1000317 3300002772 Bacteria 31376
15 JGI25165J46597_1000057 3300003214 Bacteria 217135
16 JGI25165J46597_1000601 3300003214 Bacteria 30833
17 rootH2_10007042 3300003320 Bacteria 38280
18 Ga0006562J51391_1005457 3300003578 Bacteria 12571
19 Ga0055538_1000742 3300003751 Bacteria 9457
20 Ga0055533_1001004 3300003756 Bacteria 8191
21 Ga0055525_1000124 3300003759 Bacteria 116698
22 Ga0055527_1000111 3300003760 Bacteria 58194
23 Ga0055527_1000337 3300003760 Bacteria 23995
24 Ga0055535_1000204 3300003761 Bacteria 62769
25 Ga0055535_1000238 3300003761 Bacteria 58182
26 Ga0055535_1000885 3300003761 Bacteria 20792
27 Ga0055535_1001125 3300003761 Bacteria 16058
28 Ga0055535_1001135 3300003761 Bacteria 15841
29 Ga0055542_1000243 3300003762 Bacteria 62769
30 Ga0055542_1000272 3300003762 Bacteria 58181
31 Ga0055542_1000278 3300003762 Bacteria 57321
32 Ga0055542_1000359 3300003762 Bacteria 47683
33 Ga0055542_1000432 3300003762 Bacteria 40265
34 Ga0055542_1000599 3300003762 Bacteria 30833
35 Ga0055529_1000137 3300003763 Bacteria 103695
36 Ga0055529_1000299 3300003763 Bacteria 57321
37 Ga0055529_1000446 3300003763 Bacteria 41042
38 Ga0055529_1000915 3300003763 Bacteria 16058
39 Ga0055531_10005938 3300003794 Bacteria 7022
40 Ga0065165_1003868 3300005262 Bacteria 9936
41 Ga0065704_10073684 3300005289 Bacteria 6891
42 Ga0065712_10074471 3300005290 Bacteria 4086
43 Ga0070683_100003219 3300005329 Bacteria 13178
44 Ga0070690_100003155 3300005330 Bacteria 8978
45 Ga0070666_10000058 3300005335 Bacteria 89886
46 Ga0070666_10004377 3300005335 Bacteria 8602
47 Ga0070680_100003158 3300005336 Bacteria 12242
48 Ga0070680_100035058 3300005336 Unclassified 4050
49 Ga0070682_100004055 3300005337 Bacteria 8138
50 Ga0070660_100021842 3300005339 Bacteria 4725
51 Ga0070689_100002971 3300005340 Bacteria 11141
52 Ga0070689_100005710 3300005340 Bacteria 8527
53 Ga0070661_100017224 3300005344 Bacteria 5123
54 Ga0070668_100031280 3300005347 Bacteria 4049
55 Ga0070673_100024028 3300005364 Bacteria 4461
56 Ga0070688_100019712 3300005365 Bacteria 3910
57 Ga0070667_100023705 3300005367 Bacteria 5094
58 Ga0070667_100054698 3300005367 Bacteria 3370
59 Ga0070685_10003562 3300005466 Bacteria 7901
60 Ga0070679_100070430 3300005530 Bacteria 3489
61 Ga0070684_100030852 3300005535 Bacteria 4559
62 Ga0068853_100031423 3300005539 Bacteria 4492
63 Ga0070672_100060974 3300005543 Bacteria 2972
64 Ga0070696_100000204 3300005546 Bacteria 35310
65 Ga0070665_100000525 3300005548 Bacteria 54632
66 Ga0070665_100005387 3300005548 Bacteria 13204
67 Ga0068855_100003681 3300005563 Bacteria 18753
68 Ga0070664_100007266 3300005564 Bacteria 8927
69 Ga0068857_100002638 3300005577 Bacteria 14726
70 Ga0068857_100013762 3300005577 Bacteria 7049
71 Ga0068854_100002988 3300005578 Bacteria 10488
72 Ga0068856_100000074 3300005614 Bacteria 94656
73 Ga0068856_100004734 3300005614 Bacteria 13510
74 Ga0068852_100004751 3300005616 Bacteria 9645
75 Ga0068852_100010032 3300005616 Bacteria 7048
76 Ga0068864_100004126 3300005618 Bacteria 11926
77 Ga0068861_100000062 3300005719 Bacteria 51049
78 Ga0068861_100001597 3300005719 Bacteria 14422
79 Ga0068851_10004633 3300005834 Bacteria 6209
80 Ga0068870_10006498 3300005840 Bacteria 5157
81 Ga0068863_100014045 3300005841 Bacteria 7716
82 Ga0068858_100004776 3300005842 Bacteria 13274
83 Ga0068860_100025923 3300005843 Bacteria 5656
84 Ga0068862_100000727 3300005844 Bacteria 33406
85 Ga0081455_10012816 3300005937 Bacteria 8330
86 Ga0097621_100005990 3300006237 Bacteria 8596
87 Ga0068871_100001578 3300006358 Bacteria 15322
88 Ga0075428_100007421 3300006844 Bacteria 12149
89 Ga0075428_100109755 3300006844 Bacteria 3005
90 Ga0075431_100002146 3300006847 Bacteria 18858
91 Ga0068865_100002526 3300006881 Bacteria 10832
92 Ga0068865_100021305 3300006881 Bacteria 4213
93 Ga0105240_10000668 3300009093 Bacteria 62941
94 Ga0105240_10001088 3300009093 Bacteria 47994
95 Ga0105240_10005178 3300009093 Bacteria 19502
96 Ga0105240_10019443 3300009093 Bacteria 9074
97 Ga0105240_10034138 3300009093 Bacteria 6565
98 Ga0105240_10100557 3300009093 Bacteria 3518
99 Ga0111539_10002901 3300009094 Bacteria 22766
100 Ga0105241_10001296 3300009174 Bacteria 19031
101 Ga0105242_10000796 3300009176 Bacteria 24434
102 Ga0105237_10000084 3300009545 Bacteria 125742
103 Ga0105237_10008487 3300009545 Bacteria 11118
104 Ga0105237_10048000 3300009545 Bacteria 4293
105 Ga0105238_10008412 3300009551 Bacteria 10328
106 Ga0105249_10001525 3300009553 Bacteria 20309
107 Ga0105249_10009830 3300009553 Bacteria 8383
108 Ga0105249_10062612 3300009553 Bacteria 3416
109 Ga0105239_10000174 3300010375 Bacteria 92922
110 Ga0105239_10010755 3300010375 Bacteria 10222
111 Ga0105239_10019573 3300010375 Bacteria 7472
112 Ga0157369_10000001 3300013105 Bacteria 554908
113 Ga0157369_10004125 3300013105 Bacteria 17212
114 Ga0157369_10008089 3300013105 Bacteria 12058
115 Ga0157369_10108138 3300013105 Bacteria 2958
116 Ga0157374_10066287 3300013296 Bacteria 3393
117 Ga0157374_10075024 3300013296 Bacteria 3195
118 Ga0163162_10001587 3300013306 Bacteria 21250
119 Ga0157372_10054413 3300013307 Bacteria 4464
120 Ga0157375_10010460 3300013308 Bacteria 8165
121 Ga0157375_10019965 3300013308 Bacteria 6109
122 Ga0157375_10021644 3300013308 Bacteria 5901
123 Ga0163163_10017171 3300014325 Bacteria 6743
124 Ga0183369_1013 3300015685 Bacteria 222738
125 Ga0183368_1003 3300015687 Bacteria 1276390
126 Ga0206350_10673251 3300020080 Bacteria 3164
127 Ga0224712_10008277 3300022467 Bacteria 3074
128 Ga0209784_100011 3300025224 Bacteria 546770
129 Ga0209674_100012 3300025226 Bacteria 950162
130 Ga0209674_100309 3300025226 Bacteria 32721
131 Ga0209674_100575 3300025226 Bacteria 14302
132 Ga0209672_100005 3300025228 Bacteria 1069303
133 Ga0209672_100055 3300025228 Bacteria 221655
134 Ga0209672_100227 3300025228 Bacteria 43114
135 Ga0209672_100706 3300025228 Bacteria 16637
136 Ga0209672_100876 3300025228 Bacteria 13762
137 Ga0209672_101056 3300025228 Bacteria 11790
138 Ga0209563_100045 3300025230 Bacteria 377102
139 Ga0207427_100026 3300025231 Bacteria 412764
140 Ga0207427_100053 3300025231 Bacteria 217191
141 Ga0207427_101499 3300025231 Bacteria 8302
142 Ga0209437_100108 3300025233 Bacteria 217191
143 Ga0209437_100403 3300025233 Bacteria 40042
144 Ga0209437_100470 3300025233 Bacteria 30896
145 Ga0209258_100006 3300025242 Bacteria 1069303
146 Ga0209258_100012 3300025242 Bacteria 825544
147 Ga0209258_100027 3300025242 Bacteria 518449
148 Ga0209258_100055 3300025242 Bacteria 337291
149 Ga0209258_100255 3300025242 Bacteria 94924
150 Ga0209258_101030 3300025242 Bacteria 12488
151 Ga0209026_1000055 3300025250 Bacteria 237197
152 Ga0209026_1000460 3300025250 Bacteria 31536
153 Ga0209026_1000548 3300025250 Bacteria 25899
154 Ga0209026_1004536 3300025250 Bacteria 4087
155 Ga0209677_100818 3300025253 Bacteria 15538
156 Ga0209148_1000001 3300025254 Bacteria 2545271
157 Ga0209148_1000002 3300025254 Bacteria 2399500
158 Ga0209148_1000012 3300025254 Bacteria 1069303
159 Ga0209148_1000014 3300025254 Bacteria 925277
160 Ga0209148_1000058 3300025254 Bacteria 357482
161 Ga0209148_1000221 3300025254 Bacteria 94627
162 Ga0209759_1000191 3300025256 Bacteria 97876
163 Ga0209759_1000674 3300025256 Bacteria 31257
164 Ga0209759_1000679 3300025256 Bacteria 30848
165 Ga0209759_1005012 3300025256 Bacteria 4761
166 Ga0209129_1001530 3300025258 Bacteria 12766
167 Ga0209233_1000002 3300025261 Bacteria 2501366
168 Ga0209233_1000125 3300025261 Bacteria 217190
169 Ga0209455_1000008 3300025272 Bacteria 1069303
170 Ga0209455_1000014 3300025272 Bacteria 806601
171 Ga0209455_1000018 3300025272 Bacteria 718034
172 Ga0209455_1000019 3300025272 Bacteria 705658
173 Ga0209455_1001811 3300025272 Bacteria 8979
174 Ga0209758_1003595 3300025297 Bacteria 13868
175 Ga0209758_1013189 3300025297 Bacteria 4538
176 Ga0209257_1000067 3300025304 Bacteria 342468
177 Ga0209257_1001076 3300025304 Bacteria 35902
178 Ga0207680_10000006 3300025903 Bacteria 635950
179 Ga0207647_10000313 3300025904 Bacteria 40307
180 Ga0207647_10009984 3300025904 Bacteria 6723
181 Ga0207647_10016472 3300025904 Bacteria 5046
182 Ga0207645_10020683 3300025907 Bacteria 4303
183 Ga0207654_10004994 3300025911 Bacteria 6706
184 Ga0207695_10000007 3300025913 Bacteria 1092551
185 Ga0207695_10004123 3300025913 Bacteria 19960
186 Ga0207695_10005153 3300025913 Bacteria 17501
187 Ga0207695_10007953 3300025913 Bacteria 13376
188 Ga0207695_10011180 3300025913 Bacteria 10891
189 Ga0207695_10023015 3300025913 Bacteria 7055
190 Ga0207695_10041539 3300025913 Bacteria 4922
191 Ga0207671_10000011 3300025914 Bacteria 530349
192 Ga0207671_10003934 3300025914 Bacteria 14484
193 Ga0207671_10012649 3300025914 Bacteria 6775
194 Ga0207649_10030458 3300025920 Bacteria 3196
195 Ga0207694_10000957 3300025924 Bacteria 25496
196 Ga0207694_10001044 3300025924 Bacteria 24087
197 Ga0207694_10001468 3300025924 Bacteria 20156
198 Ga0207706_10002456 3300025933 Bacteria 18092
199 Ga0207706_10014819 3300025933 Bacteria 7058
200 Ga0207670_10003187 3300025936 Bacteria 8691
201 Ga0207704_10019709 3300025938 Bacteria 3549
202 Ga0207689_10003744 3300025942 Bacteria 13867
203 Ga0207661_10009022 3300025944 Bacteria 7146
204 Ga0207679_10004739 3300025945 Bacteria 8468
205 Ga0207667_10000249 3300025949 Bacteria 75885
206 Ga0207667_10001527 3300025949 Bacteria 29084
207 Ga0207667_10001682 3300025949 Bacteria 27862
208 Ga0207651_10002080 3300025960 Bacteria 9439
209 Ga0207712_10000466 3300025961 Bacteria 34075
210 Ga0207712_10028262 3300025961 Bacteria 3749
211 Ga0207668_10021542 3300025972 Bacteria 4111
212 Ga0207640_10001067 3300025981 Bacteria 15190
213 Ga0207640_10001917 3300025981 Bacteria 11181
214 Ga0207677_10005340 3300026023 Bacteria 6968
215 Ga0207703_10000759 3300026035 Bacteria 31818
216 Ga0207703_10016402 3300026035 Bacteria 5775
217 Ga0207639_10000364 3300026041 Bacteria 31337
218 Ga0207678_10026359 3300026067 Bacteria 5071
219 Ga0207702_10000146 3300026078 Bacteria 82931
220 Ga0207702_10001245 3300026078 Bacteria 25719
221 Ga0207702_10011349 3300026078 Bacteria 7428
222 Ga0207702_10038081 3300026078 Bacteria 4028
223 Ga0207641_10058818 3300026088 Bacteria 3272
224 Ga0207674_10003839 3300026116 Bacteria 18316
225 Ga0207674_10006655 3300026116 Bacteria 13575
226 Ga0207675_100000614 3300026118 Bacteria 34802
227 Ga0207675_100001804 3300026118 Bacteria 21445
228 Ga0265354_1000223 3300028016 Bacteria 10359
229 Ga0268266_10000006 3300028379 Bacteria 1410021
230 Ga0268266_10000043 3300028379 Bacteria 316604
231 Ga0268266_10005918 3300028379 Bacteria 11311
232 Ga0268266_10010762 3300028379 Bacteria 7971
233 Ga0268265_10001828 3300028380 Bacteria 16980
234 Ga0268265_10005796 3300028380 Bacteria 8428
235 Ga0307515_10079301 3300028794 Bacteria 4303
236 Ga0265770_1000005 3300030878 Bacteria 23577
237 Ga0307513_10007811 3300031456 Bacteria 13798
238 Ga0307513_10026058 3300031456 Bacteria 6752
239 Ga0307513_10061640 3300031456 Bacteria 3970
240 Ga0307509_10033298 3300031507 Bacteria 5673
241 Ga0307510_10000260 3300033180 Bacteria 48220
242 Ga0373933_0019803 3300035724 Bacteria 3808
243 Ga0373937_0061391 3300036401 Bacteria 3455
244 Ga0395899_0000076 3300037312 Bacteria 177673
245 Ga0395899_0006222 3300037312 Bacteria 9251
246 Ga0395899_0020033 3300037312 Bacteria 5074
247 Ga0395899_0044001 3300037312 Bacteria 3327
248 Ga0395900_0000024 3300037418 Bacteria 323480
249 Ga0395900_0002959 3300037418 Bacteria 18492
250 Ga0395900_0006283 3300037418 Bacteria 12394
251 Ga0395898_0000044 3300037466 Bacteria 298164
252 Ga0395898_0000311 3300037466 Bacteria 112412
253 Ga0395898_0022997 3300037466 Bacteria 6302
254 Ga0395901_0047048 3300038443 Bacteria 4482
255 Ga0466969_0000423 3300044656 Bacteria 23121
256 Ga0466969_0001243 3300044656 Bacteria 13760
257 Ga0466969_0004098 3300044656 Bacteria 7733
258 Ga0466969_0010581 3300044656 Bacteria 4889
259 Ga0466982_0000012 3300044672 Bacteria 166823
260 Ga0466966_0003498 3300044684 Bacteria 10356
261 Ga0466966_0010153 3300044684 Bacteria 6245
262 Ga0466961_0000661 3300044693 Bacteria 21708
263 Ga0466961_0001936 3300044693 Bacteria 12901
264 Ga0466961_0002899 3300044693 Bacteria 10640
265 Ga0466961_0029422 3300044693 Bacteria 3531
266 Ga0466970_0012394 3300044765 Bacteria 4357
267 Ga0466957_0000988 3300044842 Bacteria 14599
268 Ga0466957_0017587 3300044842 Bacteria 4190
269 Ga0466959_0000112 3300045049 Bacteria 52606
270 Ga0466959_0006445 3300045049 Bacteria 8126
271 Ga0451576_0058657 3300045051 Bacteria 4021
272 Ga0495638_0000248 3300046460 Bacteria 73332
273 Ga0495638_0001918 3300046460 Bacteria 17898
274 Ga0495650_0000027 3300046471 Bacteria 475071
275 Ga0495650_0000961 3300046471 Bacteria 33088
276 Ga0495606_0000113 3300046507 Bacteria 136805
277 Ga0495663_0000267 3300046525 Bacteria 20059
278 Ga0495671_0001170 3300046692 Bacteria 17967
279 Ga0495649_0000784 3300046694 Bacteria 25529
280 Ga0496104_0000017 3300048907 Bacteria 325877
281 Ga0496105_0000009 3300048908 Bacteria 325734
282 Ga0496105_0003298 3300048908 Bacteria 11919
283 Ga0496115_0000085 3300048918 Bacteria 86743
284 Ga0496115_0000247 3300048918 Bacteria 48853
285 Ga0496115_0002434 3300048918 Bacteria 13368
286 Ga0496118_0003996 3300048921 Bacteria 17971
287 Ga0496118_0007951 3300048921 Bacteria 11094
288 Ga0496119_0000248 3300048922 Bacteria 76311
289 Ga0496120_0000143 3300048923 Bacteria 120051
290 Ga0496121_0000593 3300048924 Bacteria 67965
291 Ga0496123_0007593 3300048926 Bacteria 10161
292 Ga0496124_0061148 3300048927 Bacteria 3158
293 Ga0496125_0000239 3300048928 Bacteria 112926
294 Ga0496126_0000033 3300048929 Bacteria 368851
295 Ga0496126_0000712 3300048929 Bacteria 60417
296 Ga0496126_0017424 3300048929 Bacteria 7157
297 Ga0496126_0017425 3300048929 Bacteria 7157
298 Ga0495678_006651 3300049459 Bacteria 6116
299 Ga0501033_0000902 3300049570 Bacteria 27130
300 Ga0501046_0015201 3300049580 Bacteria 6472
301 Ga0501070_0035754 3300049586 Bacteria 4148
302 Ga0501080_0055545 3300049742 Bacteria 3688
303 Ga0501035_0018201 3300049822 Bacteria 6470
304 Ga0501035_0020958 3300049822 Bacteria 6007
305 Ga0501044_0028113 3300049823 Bacteria 5935
306 Ga0501044_0034643 3300049823 Bacteria 5293
307 Ga0501044_0034850 3300049823 Bacteria 5275
308 nmdc:mga08y16_55653_c1 3300050511 Bacteria 4133
309 Ga0500622_0001132 3300053156 Bacteria 22246
310 Ga0500622_0003239 3300053156 Bacteria 11060
311 Ga0466962_0005119 3300061719 Bacteria 6307
312 Ga0466962_0007289 3300061719 Bacteria 5303

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049742 Ga0501080_0055545 Ga0501080_0055545_1485_3671 702
2 3300009176 Ga0105242_10000796 Ga0105242_1000079616 736
3 3300046507 Ga0495606_0000113 Ga0495606_0000113_9517_12015 757
4 3300046460 Ga0495638_0001918 Ga0495638_0001918_9756_12254 758
5 3300044693 Ga0466961_0002899 Ga0466961_0002899_4019_6571 762
6 3300025256 Ga0209759_1005012 Ga0209759_10050122 764
7 3300003762 Ga0055542_1000432 Ga0055542_10004328 767
8 3300025231 Ga0207427_101499 Ga0207427_1014995 767
9 3300025233 Ga0209437_100403 Ga0209437_10040313 767
10 3300025250 Ga0209026_1004536 Ga0209026_10045363 767
11 3300025254 Ga0209148_1000002 Ga0209148_1000002936 767
12 3300049570 Ga0501033_0000902 Ga0501033_0000902_4633_7152 768
13 3300005563 Ga0068855_100003681 Ga0068855_10000368112 775
14 3300009093 Ga0105240_10001088 Ga0105240_1000108842 775
15 3300025949 Ga0207667_10001527 Ga0207667_1000152719 775
16 3300046694 Ga0495649_0000784 Ga0495649_0000784_13479_16028 776
17 3300048918 Ga0496115_0002434 Ga0496115_0002434_1339_3888 776
18 3300048929 Ga0496126_0017424 Ga0496126_0017424_1319_3868 776
19 3300049459 Ga0495678_006651 Ga0495678_006651_2612_5161 776
20 3300005329 Ga0070683_100003219 Ga0070683_1000032197 777
21 3300005546 Ga0070696_100000204 Ga0070696_10000020424 777
22 3300009093 Ga0105240_10100557 Ga0105240_101005571 777
23 3300025944 Ga0207661_10009022 Ga0207661_100090222 777
24 3300009093 Ga0105240_10005178 Ga0105240_100051787 778
25 3300010375 Ga0105239_10000174 Ga0105239_100001747 778
26 3300025913 Ga0207695_10004123 Ga0207695_100041234 778
27 3300037312 Ga0395899_0044001 Ga0395899_0044001_203_2698 778
28 3300045049 Ga0466959_0006445 Ga0466959_0006445_650_3604 778
29 3300048924 Ga0496121_0000593 Ga0496121_0000593_52916_55447 778
30 3300005548 Ga0070665_100005387 Ga0070665_1000053871 780
31 3300028379 Ga0268266_10005918 Ga0268266_100059189 780
32 3300049823 Ga0501044_0034850 Ga0501044_0034850_29_2542 780
33 3300005466 Ga0070685_10003562 Ga0070685_100035623 785
34 3300044656 Ga0466969_0001243 Ga0466969_0001243_7303_9846 785
35 3300044684 Ga0466966_0003498 Ga0466966_0003498_7331_9874 785
36 3300061719 Ga0466962_0005119 Ga0466962_0005119_2186_4729 785
37 3300044656 Ga0466969_0000423 Ga0466969_0000423_19409_22360 787
38 iso_pu_bacteria 2928963466 2928965142 788
39 3300009094 Ga0111539_10002901 Ga0111539_1000290116 789
40 3300002737 JGI25162J39368_1001302 JGI25162J39368_10013022 790
41 3300005337 Ga0070682_100004055 Ga0070682_1000040554 790
42 3300005339 Ga0070660_100021842 Ga0070660_1000218423 790
43 3300005614 Ga0068856_100000074 Ga0068856_1000000746 790
44 3300006844 Ga0075428_100007421 Ga0075428_1000074212 790
45 3300006847 Ga0075431_100002146 Ga0075431_1000021462 790
46 3300013105 Ga0157369_10008089 Ga0157369_100080899 790
47 3300020080 Ga0206350_10673251 Ga0206350_106732512 790
48 3300022467 Ga0224712_10008277 Ga0224712_100082772 790
49 3300026078 Ga0207702_10000146 Ga0207702_1000014630 790
50 3300028016 Ga0265354_1000223 Ga0265354_10002238 790
51 3300030878 Ga0265770_1000005 Ga0265770_100000511 790
52 3300048921 Ga0496118_0007951 Ga0496118_0007951_8055_10586 790
53 3300048929 Ga0496126_0000712 Ga0496126_0000712_27639_30170 790
54 3300003320 rootH2_10007042 rootH2_1000704222 791
55 3300044693 Ga0466961_0000661 Ga0466961_0000661_11638_14202 791
56 3300044842 Ga0466957_0017587 Ga0466957_0017587_823_3387 791
57 3300048908 Ga0496105_0003298 Ga0496105_0003298_5419_7944 791
58 3300048921 Ga0496118_0003996 Ga0496118_0003996_9591_12116 791
59 3300048922 Ga0496119_0000248 Ga0496119_0000248_68631_71156 791
60 3300048923 Ga0496120_0000143 Ga0496120_0000143_112371_114896 791
61 iso_pu_bacteria 2739367700 2739732457 791
62 3300005336 Ga0070680_100035058 Ga0070680_1000350584 792
63 3300005340 Ga0070689_100002971 Ga0070689_1000029712 792
64 3300005344 Ga0070661_100017224 Ga0070661_1000172242 792
65 3300005365 Ga0070688_100019712 Ga0070688_1000197121 792
66 3300005367 Ga0070667_100054698 Ga0070667_1000546982 792
67 3300005843 Ga0068860_100025923 Ga0068860_1000259232 792
68 3300006881 Ga0068865_100021305 Ga0068865_1000213052 792
69 3300025228 Ga0209672_100706 Ga0209672_1007068 792
70 3300037312 Ga0395899_0006222 Ga0395899_0006222_1921_4485 792
71 3300044693 Ga0466961_0001936 Ga0466961_0001936_464_3013 792
72 3300044765 Ga0466970_0012394 Ga0466970_0012394_330_2879 792
73 3300044842 Ga0466957_0000988 Ga0466957_0000988_1450_3999 792
74 3300046460 Ga0495638_0000248 Ga0495638_0000248_4588_7125 792
75 3300046471 Ga0495650_0000961 Ga0495650_0000961_20763_23300 792
76 3300049580 Ga0501046_0015201 Ga0501046_0015201_1872_4382 792
77 3300049822 Ga0501035_0020958 Ga0501035_0020958_3450_5957 792
78 3300049823 Ga0501044_0028113 Ga0501044_0028113_2530_5037 792
79 3300013105 Ga0157369_10004125 Ga0157369_100041252 793
80 3300037466 Ga0395898_0000311 Ga0395898_0000311_75146_77710 793
81 3300049822 Ga0501035_0018201 Ga0501035_0018201_2892_5405 793
82 3300003761 Ga0055535_1000204 Ga0055535_10002045 794
83 3300003762 Ga0055542_1000243 Ga0055542_100024337 794
84 3300025228 Ga0209672_101056 Ga0209672_1010563 794
85 3300025242 Ga0209258_100255 Ga0209258_10025540 794
86 3300025254 Ga0209148_1000221 Ga0209148_100022140 794
87 3300025272 Ga0209455_1001811 Ga0209455_10018113 794
88 3300003760 Ga0055527_1000337 Ga0055527_10003375 795
89 3300003761 Ga0055535_1000885 Ga0055535_100088510 795
90 3300003762 Ga0055542_1000278 Ga0055542_100027832 795
91 3300003763 Ga0055529_1000299 Ga0055529_100029932 795
92 3300005614 Ga0068856_100004734 Ga0068856_1000047343 795
93 3300025226 Ga0209674_100309 Ga0209674_1003096 795
94 3300025226 Ga0209674_100575 Ga0209674_1005755 795
95 3300025228 Ga0209672_100055 Ga0209672_100055102 795
96 3300025242 Ga0209258_100012 Ga0209258_10001249 795
97 3300025253 Ga0209677_100818 Ga0209677_1008189 795
98 3300025254 Ga0209148_1000014 Ga0209148_1000014606 795
99 3300025272 Ga0209455_1000014 Ga0209455_1000014494 795
100 3300026078 Ga0207702_10001245 Ga0207702_100012454 795
101 3300028794 Ga0307515_10079301 Ga0307515_100793011 795
102 3300005335 Ga0070666_10000058 Ga0070666_100000588 796
103 3300009093 Ga0105240_10000668 Ga0105240_1000066826 796
104 3300009545 Ga0105237_10048000 Ga0105237_100480002 796
105 3300009551 Ga0105238_10008412 Ga0105238_100084121 796
106 3300013306 Ga0163162_10001587 Ga0163162_100015876 796
107 3300025903 Ga0207680_10000006 Ga0207680_10000006139 796
108 3300025913 Ga0207695_10000007 Ga0207695_10000007821 796
109 3300025914 Ga0207671_10012649 Ga0207671_100126492 796
110 3300025924 Ga0207694_10000957 Ga0207694_100009578 796
111 3300028379 Ga0268266_10000043 Ga0268266_10000043194 796
112 3300037312 Ga0395899_0020033 Ga0395899_0020033_430_2967 796
113 3300037418 Ga0395900_0002959 Ga0395900_0002959_8073_10610 796
114 3300048929 Ga0496126_0017425 Ga0496126_0017425_1073_3634 796
115 3300002741 JGI25157J39369_1000433 JGI25157J39369_100043312 798
116 3300003759 Ga0055525_1000124 Ga0055525_100012481 798
117 3300003760 Ga0055527_1000111 Ga0055527_100011137 798
118 3300003761 Ga0055535_1000238 Ga0055535_100023837 798
119 3300003762 Ga0055542_1000272 Ga0055542_10002727 798
120 3300003763 Ga0055529_1000446 Ga0055529_10004465 798
121 3300025228 Ga0209672_100005 Ga0209672_100005177 798
122 3300025228 Ga0209672_100876 Ga0209672_10087610 798
123 3300025230 Ga0209563_100045 Ga0209563_100045131 798
124 3300025242 Ga0209258_100006 Ga0209258_100006177 798
125 3300025250 Ga0209026_1000055 Ga0209026_1000055164 798
126 3300025254 Ga0209148_1000012 Ga0209148_1000012177 798
127 3300025256 Ga0209759_1000191 Ga0209759_10001915 798
128 3300025272 Ga0209455_1000008 Ga0209455_1000008177 798
129 3300037312 Ga0395899_0000076 Ga0395899_0000076_37183_39732 798
130 3300037418 Ga0395900_0000024 Ga0395900_0000024_236823_239372 798
131 3300037418 Ga0395900_0006283 Ga0395900_0006283_4579_7125 798
132 3300037466 Ga0395898_0000044 Ga0395898_0000044_50589_53138 798
133 3300037466 Ga0395898_0022997 Ga0395898_0022997_2078_4624 798
134 3300038443 Ga0395901_0047048 Ga0395901_0047048_1233_3779 798
135 3300044656 Ga0466969_0004098 Ga0466969_0004098_4349_6898 798
136 3300044693 Ga0466961_0029422 Ga0466961_0029422_617_3166 798
137 3300045049 Ga0466959_0000112 Ga0466959_0000112_38776_41325 798
138 3300053156 Ga0500622_0001132 Ga0500622_0001132_9158_11599 798
139 3300053156 Ga0500622_0003239 Ga0500622_0003239_2849_5290 798
140 3300005290 Ga0065712_10074471 Ga0065712_100744713 799
141 3300005330 Ga0070690_100003155 Ga0070690_1000031556 799
142 3300005340 Ga0070689_100005710 Ga0070689_1000057106 799
143 3300005364 Ga0070673_100024028 Ga0070673_1000240284 799
144 3300005564 Ga0070664_100007266 Ga0070664_1000072663 799
145 3300005577 Ga0068857_100013762 Ga0068857_1000137625 799
146 3300005618 Ga0068864_100004126 Ga0068864_1000041265 799
147 3300005719 Ga0068861_100001597 Ga0068861_1000015978 799
148 3300005841 Ga0068863_100014045 Ga0068863_1000140456 799
149 3300006844 Ga0075428_100109755 Ga0075428_1001097552 799
150 3300006881 Ga0068865_100002526 Ga0068865_1000025262 799
151 3300013308 Ga0157375_10010460 Ga0157375_100104604 799
152 3300013308 Ga0157375_10021644 Ga0157375_100216444 799
153 3300014325 Ga0163163_10017171 Ga0163163_100171712 799
154 3300025907 Ga0207645_10020683 Ga0207645_100206833 799
155 3300025936 Ga0207670_10003187 Ga0207670_100031876 799
156 3300025938 Ga0207704_10019709 Ga0207704_100197092 799
157 3300025942 Ga0207689_10003744 Ga0207689_1000374412 799
158 3300025945 Ga0207679_10004739 Ga0207679_100047393 799
159 3300025960 Ga0207651_10002080 Ga0207651_100020806 799
160 3300026023 Ga0207677_10005340 Ga0207677_100053402 799
161 3300026035 Ga0207703_10016402 Ga0207703_100164022 799
162 3300026116 Ga0207674_10006655 Ga0207674_100066556 799
163 3300026118 Ga0207675_100001804 Ga0207675_10000180415 799
164 3300028379 Ga0268266_10010762 Ga0268266_100107622 799
165 3300028380 Ga0268265_10005796 Ga0268265_100057964 799
166 3300045051 Ga0451576_0058657 Ga0451576_0058657_1270_3750 799
167 3300048907 Ga0496104_0000017 Ga0496104_0000017_95781_98372 799
168 3300048908 Ga0496105_0000009 Ga0496105_0000009_222417_225008 799
169 3300050511 nmdc:mga08y16_55653_c1 nmdc:mga08y16_55653_c1_532_3012 799
170 3300044656 Ga0466969_0010581 Ga0466969_0010581_937_3450 800
171 3300044672 Ga0466982_0000012 Ga0466982_0000012_26586_29099 800
172 3300044684 Ga0466966_0010153 Ga0466966_0010153_2182_4695 800
173 3300046471 Ga0495650_0000027 Ga0495650_0000027_467136_469697 800
174 3300061719 Ga0466962_0007289 Ga0466962_0007289_2653_5166 800
175 3300002705 JGI25156J39149_1001356 JGI25156J39149_10013564 801
176 3300002737 JGI25162J39368_1002170 JGI25162J39368_10021702 801
177 3300002741 JGI25157J39369_1001902 JGI25157J39369_10019022 801
178 3300002772 JGI25164J39214_1000030 JGI25164J39214_100003028 801
179 3300003214 JGI25165J46597_1000057 JGI25165J46597_100005799 801
180 3300003761 Ga0055535_1001135 Ga0055535_10011354 801
181 3300003762 Ga0055542_1000359 Ga0055542_100035931 801
182 3300003763 Ga0055529_1000137 Ga0055529_10001375 801
183 3300025228 Ga0209672_100227 Ga0209672_1002275 801
184 3300025231 Ga0207427_100053 Ga0207427_10005387 801
185 3300025233 Ga0209437_100108 Ga0209437_10010896 801
186 3300025242 Ga0209258_100055 Ga0209258_10005578 801
187 3300025250 Ga0209026_1000548 Ga0209026_100054814 801
188 3300025254 Ga0209148_1000058 Ga0209148_1000058193 801
189 3300025256 Ga0209759_1000674 Ga0209759_10006742 801
190 3300025261 Ga0209233_1000125 Ga0209233_100012587 801
191 3300025272 Ga0209455_1000018 Ga0209455_1000018193 801
192 3300049586 Ga0501070_0035754 Ga0501070_0035754_348_2918 801
193 3300049823 Ga0501044_0034643 Ga0501044_0034643_2103_4673 801
194 3300002067 JGI24735J21928_10001527 JGI24735J21928_100015273 802
195 3300005335 Ga0070666_10004377 Ga0070666_100043772 802
196 3300005367 Ga0070667_100023705 Ga0070667_1000237052 802
197 3300005539 Ga0068853_100031423 Ga0068853_1000314232 802
198 3300005548 Ga0070665_100000525 Ga0070665_1000005259 802
199 3300005616 Ga0068852_100004751 Ga0068852_1000047515 802
200 3300005842 Ga0068858_100004776 Ga0068858_10000477611 802
201 3300009553 Ga0105249_10001525 Ga0105249_1000152512 802
202 3300013105 Ga0157369_10108138 Ga0157369_101081382 802
203 3300013296 Ga0157374_10075024 Ga0157374_100750242 802
204 3300025904 Ga0207647_10000313 Ga0207647_100003139 802
205 3300025904 Ga0207647_10009984 Ga0207647_100099842 802
206 3300025913 Ga0207695_10023015 Ga0207695_100230154 802
207 3300025920 Ga0207649_10030458 Ga0207649_100304581 802
208 3300025924 Ga0207694_10001468 Ga0207694_100014683 802
209 3300025933 Ga0207706_10002456 Ga0207706_100024567 802
210 3300025961 Ga0207712_10000466 Ga0207712_1000046611 802
211 3300026035 Ga0207703_10000759 Ga0207703_100007598 802
212 3300026041 Ga0207639_10000364 Ga0207639_100003648 802
213 3300026067 Ga0207678_10026359 Ga0207678_100263592 802
214 3300026078 Ga0207702_10038081 Ga0207702_100380812 802
215 3300028379 Ga0268266_10000006 Ga0268266_10000006923 802
216 3300005262 Ga0065165_1003868 Ga0065165_10038683 803
217 3300015685 Ga0183369_1013 Ga0183369_101326 803
218 3300009093 Ga0105240_10034138 Ga0105240_100341382 804
219 3300010375 Ga0105239_10019573 Ga0105239_100195732 804
220 3300013296 Ga0157374_10066287 Ga0157374_100662872 804
221 3300031456 Ga0307513_10026058 Ga0307513_100260584 804
222 3300048918 Ga0496115_0000085 Ga0496115_0000085_22461_25088 804
223 3300048929 Ga0496126_0000033 Ga0496126_0000033_146730_149357 804
224 3300001979 JGI24740J21852_10004642 JGI24740J21852_100046422 805
225 3300001989 JGI24739J22299_10001186 JGI24739J22299_100011863 805
226 3300003578 Ga0006562J51391_1005457 Ga0006562J51391_10054574 805
227 3300005577 Ga0068857_100002638 Ga0068857_1000026383 805
228 3300005578 Ga0068854_100002988 Ga0068854_1000029886 805
229 3300005616 Ga0068852_100010032 Ga0068852_1000100323 805
230 3300005834 Ga0068851_10004633 Ga0068851_100046332 805
231 3300009093 Ga0105240_10019443 Ga0105240_100194434 805
232 3300009545 Ga0105237_10000084 Ga0105237_100000846 805
233 3300010375 Ga0105239_10010755 Ga0105239_100107553 805
234 3300025258 Ga0209129_1001530 Ga0209129_10015306 805
235 3300025297 Ga0209758_1003595 Ga0209758_10035954 805
236 3300025297 Ga0209758_1013189 Ga0209758_10131892 805
237 3300025904 Ga0207647_10016472 Ga0207647_100164722 805
238 3300025913 Ga0207695_10005153 Ga0207695_100051534 805
239 3300025913 Ga0207695_10007953 Ga0207695_100079536 805
240 3300025913 Ga0207695_10011180 Ga0207695_100111804 805
241 3300025914 Ga0207671_10000011 Ga0207671_10000011302 805
242 3300025949 Ga0207667_10000249 Ga0207667_1000024953 805
243 3300025949 Ga0207667_10001682 Ga0207667_1000168212 805
244 3300025981 Ga0207640_10001067 Ga0207640_100010676 805
245 3300025981 Ga0207640_10001917 Ga0207640_100019172 805
246 3300026116 Ga0207674_10003839 Ga0207674_100038396 805
247 3300031507 Ga0307509_10033298 Ga0307509_100332982 805
248 3300048928 Ga0496125_0000239 Ga0496125_0000239_35886_38429 805
249 3300003794 Ga0055531_10005938 Ga0055531_100059382 806
250 3300005336 Ga0070680_100003158 Ga0070680_1000031584 806
251 3300005535 Ga0070684_100030852 Ga0070684_1000308522 806
252 3300005937 Ga0081455_10012816 Ga0081455_100128163 806
253 3300006237 Ga0097621_100005990 Ga0097621_1000059904 806
254 3300006358 Ga0068871_100001578 Ga0068871_1000015784 806
255 3300013307 Ga0157372_10054413 Ga0157372_100544131 806
256 3300025304 Ga0209257_1001076 Ga0209257_10010767 806
257 3300046525 Ga0495663_0000267 Ga0495663_0000267_12087_14609 806
258 3300046692 Ga0495671_0001170 Ga0495671_0001170_143_2665 806
259 iso_pu_bacteria 2884411467 2884412523 806
260 3300005543 Ga0070672_100060974 Ga0070672_1000609741 807
261 3300013308 Ga0157375_10019965 Ga0157375_100199654 807
262 3300026088 Ga0207641_10058818 Ga0207641_100588182 807
263 3300033180 Ga0307510_10000260 Ga0307510_1000026021 807
264 3300035724 Ga0373933_0019803 Ga0373933_0019803_879_3476 807
265 3300036401 Ga0373937_0061391 Ga0373937_0061391_636_3233 807
266 iso_pu_bacteria 2687453130 2687584353 807
267 3300005347 Ga0070668_100031280 Ga0070668_1000312802 808
268 3300005530 Ga0070679_100070430 Ga0070679_1000704302 808
269 3300005719 Ga0068861_100000062 Ga0068861_10000006224 808
270 3300005840 Ga0068870_10006498 Ga0068870_100064981 808
271 3300005844 Ga0068862_100000727 Ga0068862_10000072724 808
272 3300009553 Ga0105249_10009830 Ga0105249_100098305 808
273 3300025933 Ga0207706_10014819 Ga0207706_100148192 808
274 3300025972 Ga0207668_10021542 Ga0207668_100215422 808
275 3300026118 Ga0207675_100000614 Ga0207675_10000061424 808
276 3300028380 Ga0268265_10001828 Ga0268265_100018281 808
277 3300003756 Ga0055533_1001004 Ga0055533_10010042 809
278 3300009174 Ga0105241_10001296 Ga0105241_100012963 809
279 3300009545 Ga0105237_10008487 Ga0105237_100084872 809
280 3300009553 Ga0105249_10062612 Ga0105249_100626121 809
281 3300013105 Ga0157369_10000001 Ga0157369_10000001191 809
282 3300025226 Ga0209674_100012 Ga0209674_100012117 809
283 3300025242 Ga0209258_101030 Ga0209258_1010303 809
284 3300025911 Ga0207654_10004994 Ga0207654_100049942 809
285 3300025913 Ga0207695_10041539 Ga0207695_100415393 809
286 3300025914 Ga0207671_10003934 Ga0207671_100039346 809
287 3300025924 Ga0207694_10001044 Ga0207694_100010443 809
288 3300025961 Ga0207712_10028262 Ga0207712_100282621 809
289 3300002737 JGI25162J39368_1001100 JGI25162J39368_10011005 810
290 3300002741 JGI25157J39369_1000830 JGI25157J39369_10008305 810
291 3300002771 JGI25163J39215_1000233 JGI25163J39215_10002339 810
292 3300002772 JGI25164J39214_1000317 JGI25164J39214_10003175 810
293 3300003214 JGI25165J46597_1000601 JGI25165J46597_100060116 810
294 3300003751 Ga0055538_1000742 Ga0055538_10007424 810
295 3300003761 Ga0055535_1001125 Ga0055535_10011255 810
296 3300003762 Ga0055542_1000599 Ga0055542_100059916 810
297 3300003763 Ga0055529_1000915 Ga0055529_10009155 810
298 3300015687 Ga0183368_1003 Ga0183368_1003377 810
299 3300025224 Ga0209784_100011 Ga0209784_100011457 810
300 3300025231 Ga0207427_100026 Ga0207427_100026345 810
301 3300025233 Ga0209437_100470 Ga0209437_10047016 810
302 3300025242 Ga0209258_100027 Ga0209258_10002790 810
303 3300025250 Ga0209026_1000460 Ga0209026_10004605 810
304 3300025254 Ga0209148_1000001 Ga0209148_1000001828 810
305 3300025256 Ga0209759_1000679 Ga0209759_100067916 810
306 3300025261 Ga0209233_1000002 Ga0209233_10000021402 810
307 3300025272 Ga0209455_1000019 Ga0209455_1000019157 810
308 3300026078 Ga0207702_10011349 Ga0207702_100113494 810
309 3300031456 Ga0307513_10061640 Ga0307513_100616402 810
310 3300048918 Ga0496115_0000247 Ga0496115_0000247_10000_12522 810
311 3300025304 Ga0209257_1000067 Ga0209257_1000067285 811
312 3300031456 Ga0307513_10007811 Ga0307513_100078115 813
313 3300048926 Ga0496123_0007593 Ga0496123_0007593_1645_4155 813
314 3300048927 Ga0496124_0061148 Ga0496124_0061148_201_2711 813
315 3300005289 Ga0065704_10073684 Ga0065704_100736842 816
316 2162886007 SwRhRL2b_contig_1943480 SwRhRL2b_0888.00004350 824

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07660

STN

Secretin and TonB N terminus short domain

57

105

0.95

PF07715

Plug

TonB-dependent Receptor Plug Domain

202

316

0.88

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

308

939

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
4epa-assembly1.cif.gz_A the crystal structure of the ferric yersiniabactin uptake receptor fyua from yersinia pestis 0.8279 54 824
2guf-assembly1.cif.gz_A in meso crystal structure of the cobalamin transporter, btub 0.8256 30 824
2guf-assembly1.cif.gz_A in meso crystal structure of the cobalamin transporter, btub 0.8231 30 824
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.8178 36 824
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.8135 36 824
ID Description Score Start End Superfamily
4epaA00 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8186 54 824 2.40.170.20
4epaA00 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8005 54 824 2.40.170.20
1fi1A02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7916 176 822 2.40.170.20
1fi1A02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7863 176 822 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.78 171 824 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A7V8HN86-F1-model_v4 deleted 0.9327 43 824
AF-A0A7V8HN86-F1-model_v4 deleted 0.9291 43 824
AF-A0A0A8WNL6-F1-model_v4 TonB-dependent receptor plug 0.9125 34 824 GO:0009279
GO:0015344
AF-A0A0A8WNL6-F1-model_v4 TonB-dependent receptor plug 0.9058 34 824 GO:0009279
GO:0015344
AF-A0A6L4A0H8-F1-model_v4 deleted 0.9037 1 481

Feature Viewer

pLDDT pTM Quality
86.34 0.88 High
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Predicted Structure (AlphaFold2)

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Map