F402797

General Info

Members Datasets Scaffolds Average Seq Length
314 270 628 129

Family's Representative Sequence

Representative Sequence 3300041463|Ga0451804_0851958|Ga0451804_0851958_66_509
Length 147
Sequence MLSTRDERPVRSSEDVVTIRQAVRQRAVDLGFSLVDQTKLVTAASELARNLVQHAGGGVVRVETISEGLRRGLRLVFEDQGPGIPDIELAMRDGYSTAHTLGAGLPGVRRLMDDFTITSEVGVGTIVRSVKWLSKPRQTGYLGGRRS

Samples

Sample ID Description Type Environment
1 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
12 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
13 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300029282 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B1.stcc.R1 Metatranscriptome Rhizosphere
96 3300029283 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B2.ctno.R1 Metatranscriptome Rhizosphere
97 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
111 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
112 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
124 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
127 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
128 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
135 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
136 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
137 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
138 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
139 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
140 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
141 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
142 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
143 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
146 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
147 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
148 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
152 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
153 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
154 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
155 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
164 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
168 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
172 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
173 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
174 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
184 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
187 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
188 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
189 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
190 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
191 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
192 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
193 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
194 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
195 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
196 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
197 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
198 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
199 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
200 2554235283 Bacillus safensis VK Isolate Rhizosphere
201 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
202 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
203 2643221731 Bacillus sp. Root147 Isolate Unclassified
204 2643221732 Bacillus sp. Root239 Isolate Unclassified
205 2643221735 Bacillus sp. Root920 Isolate Unclassified
206 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
207 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
208 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
209 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
210 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
211 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
212 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
213 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
214 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
215 2811994870 Bacillus sp. JB4 Isolate Unclassified
216 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
217 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
218 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
219 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
220 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
221 2842682962 Bacillus sp. R-72492 Isolate Unclassified
222 2842882022 Bacillus sp. R-71893 Isolate Unclassified
223 2849139964 Bacillus sp. R-71875 Isolate Unclassified
224 2857581216 Bacillus sp. R-71922 Isolate Unclassified
225 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
226 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
227 2860837431 Bacillus sp. WR11 Isolate Unclassified
228 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
229 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
230 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
231 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
232 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
233 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
234 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
235 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
236 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
237 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
238 2919720352 Priestia megaterium 4340 Isolate Unclassified
239 2919726948 Bacillus pumilus 4489 Isolate Unclassified
240 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
241 2929004312 Priestia megaterium 1104 Isolate Unclassified
242 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
243 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
244 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
245 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
246 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
247 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
248 2969141011 Bacillus velezensis MH25 Isolate Unclassified
249 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
250 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
251 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
252 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
253 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
254 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
255 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
256 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
257 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
258 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
259 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
260 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
261 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
262 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
263 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
264 8022653035 Bacillus sp. Rc4 Isolate Unclassified
265 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
266 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
267 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
268 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
269 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
270 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.93
Metatranscriptomes 3.18
Isolates 23.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.5
Nodule 0.32
Rhizoplane 8.28
Rhizosphere 69.43
Stem 0
Stem Tuber 0
Unclassified 6.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451804_0851958 3300041463 Unclassified 577
2 JGI24740J21852_10012734 3300001979 Unclassified 3162
3 JGI25151J46595_10000175 3300003187 Bacteria 82963
4 JGI25151J46595_10011551 3300003187 Bacteria 4055
5 rootH1_10003483 3300003316 Bacteria 19487
6 rootH2_10103692 3300003320 Bacteria 3752
7 rootL2_10001823 3300003322 Bacteria 19664
8 rootL2_10378576 3300003322 Bacteria 1642
9 rootH1_10037174 3300003323 Bacteria 11320
10 Ga0006562J51391_1000499 3300003578 Bacteria 40310
11 Ga0006562J51391_1000504 3300003578 Bacteria 18277
12 Ga0055532_1013272 3300003758 Bacteria 941
13 Ga0055528_1003395 3300003790 Bacteria 8023
14 Ga0058859_10888696 3300004798 Unclassified 748
15 Ga0065712_10076639 3300005290 Bacteria 3627
16 Ga0065715_10789880 3300005293 Bacteria 614
17 Ga0070676_10527385 3300005328 Bacteria 842
18 Ga0070676_10533581 3300005328 Bacteria 838
19 Ga0070690_100225470 3300005330 Bacteria 1315
20 Ga0070687_100308938 3300005343 Bacteria 1006
21 Ga0070668_100504167 3300005347 Bacteria 1048
22 Ga0070669_100258912 3300005353 Bacteria 1388
23 Ga0070675_101024798 3300005354 Unclassified 758
24 Ga0070671_100083596 3300005355 Bacteria 2669
25 Ga0070674_100039289 3300005356 Bacteria 3195
26 Ga0070673_101511678 3300005364 Unclassified 633
27 Ga0070703_10365848 3300005406 Bacteria 619
28 Ga0070713_100831215 3300005436 Unclassified 886
29 Ga0070705_100361436 3300005440 Bacteria 1062
30 Ga0070694_100419548 3300005444 Bacteria 1051
31 Ga0070708_100121713 3300005445 Bacteria 2408
32 Ga0070678_101756482 3300005456 Bacteria 584
33 Ga0068867_101088384 3300005459 Bacteria 729
34 Ga0070706_100140924 3300005467 Unclassified 2251
35 Ga0070684_100113408 3300005535 Bacteria 2433
36 Ga0070672_100175417 3300005543 Bacteria 1784
37 Ga0070686_100025445 3300005544 Bacteria 3562
38 Ga0070686_100050211 3300005544 Bacteria 2650
39 Ga0070695_100358573 3300005545 Bacteria 1094
40 Ga0070696_100123607 3300005546 Bacteria 1875
41 Ga0070665_100230441 3300005548 Bacteria 1852
42 Ga0068864_100697642 3300005618 Bacteria 991
43 Ga0068860_100019634 3300005843 Bacteria 6554
44 Ga0068862_100770483 3300005844 Bacteria 937
45 Ga0075432_10056285 3300006058 Bacteria 1394
46 Ga0068871_100482353 3300006358 Bacteria 1115
47 Ga0075428_100051466 3300006844 Bacteria 4516
48 Ga0075428_100094424 3300006844 Bacteria 3261
49 Ga0075430_100564617 3300006846 Unclassified 939
50 Ga0075431_100163808 3300006847 Bacteria 2286
51 Ga0075434_101026899 3300006871 Bacteria 838
52 Ga0075434_101304940 3300006871 Unclassified 737
53 Ga0075429_101626414 3300006880 Bacteria 561
54 Ga0105251_10168684 3300009011 Bacteria 986
55 Ga0105244_10130372 3300009036 Bacteria 1213
56 Ga0105244_10143875 3300009036 Bacteria 1145
57 Ga0105250_10088401 3300009092 Bacteria 1259
58 Ga0105250_10105697 3300009092 Bacteria 1151
59 Ga0105240_10009313 3300009093 Bacteria 13924
60 Ga0105245_10145140 3300009098 Bacteria 2238
61 Ga0105247_10012083 3300009101 Bacteria 5188
62 Ga0105243_10001583 3300009148 Bacteria 19849
63 Ga0105242_10009438 3300009176 Bacteria 7478
64 Ga0105249_11192201 3300009553 Bacteria 832
65 Ga0105239_10145431 3300010375 Bacteria 2643
66 Ga0105246_10000668 3300011119 Bacteria 19238
67 Ga0157371_10168372 3300013102 Bacteria 1565
68 Ga0157374_10187866 3300013296 Bacteria 2020
69 Ga0157378_10017003 3300013297 Bacteria 6376
70 Ga0157372_10843396 3300013307 Bacteria 1064
71 Ga0157372_11606674 3300013307 Bacteria 748
72 Ga0163163_10075795 3300014325 Unclassified 3357
73 Ga0163163_12067895 3300014325 Bacteria 629
74 Ga0157380_10120681 3300014326 Unclassified 2220
75 Ga0157377_10003353 3300014745 Bacteria 7246
76 Ga0157376_10119082 3300014969 Bacteria 2337
77 Ga0209147_102205 3300025229 Bacteria 5248
78 Ga0209673_1002457 3300025273 Bacteria 12825
79 Ga0209676_1045897 3300025292 Bacteria 1185
80 Ga0209025_1000031 3300025294 Bacteria 422015
81 Ga0209025_1050727 3300025294 Bacteria 1656
82 Ga0209025_1084677 3300025294 Bacteria 1061
83 Ga0207426_1005225 3300025302 Bacteria 6014
84 Ga0207696_1010032 3300025711 Bacteria 3495
85 Ga0207655_1021893 3300025728 Bacteria 3226
86 Ga0207655_1248181 3300025728 Bacteria 506
87 Ga0207713_1000851 3300025735 Bacteria 28054
88 Ga0207710_10008059 3300025900 Bacteria 4451
89 Ga0207645_10161847 3300025907 Bacteria 1464
90 Ga0207684_10107868 3300025910 Unclassified 2383
91 Ga0207695_10000446 3300025913 Bacteria 90493
92 Ga0207659_11083623 3300025926 Unclassified 689
93 Ga0207687_10221061 3300025927 Bacteria 1491
94 Ga0207700_10697735 3300025928 Unclassified 906
95 Ga0207644_10383464 3300025931 Bacteria 1146
96 Ga0207686_10084356 3300025934 Bacteria 2081
97 Ga0207709_10004178 3300025935 Bacteria 8390
98 Ga0207669_10048431 3300025937 Bacteria 2525
99 Ga0207669_10200304 3300025937 Bacteria 1449
100 Ga0207691_10156098 3300025940 Bacteria 2004
101 Ga0207712_10628906 3300025961 Bacteria 931
102 Ga0207703_10917346 3300026035 Bacteria 839
103 Ga0207708_11318909 3300026075 Bacteria 632
104 Ga0207676_10659893 3300026095 Bacteria 1010
105 Ga0207675_102052030 3300026118 Unclassified 589
106 Ga0209371_1003188 3300027312 Bacteria 8278
107 Ga0268266_10153389 3300028379 Bacteria 2079
108 Ga0268265_10676196 3300028380 Unclassified 995
109 Ga0268264_10007291 3300028381 Bacteria 9252
110 Ga0311003_100182 3300029282 Bacteria 849
111 Ga0310982_101614 3300029283 Bacteria 1590
112 Ga0268256_1002875 3300030500 Bacteria 8278
113 Ga0307513_10043529 3300031456 Bacteria 4929
114 Ga0307408_100030965 3300031548 Bacteria 3720
115 Ga0307408_101962295 3300031548 Bacteria 562
116 Ga0307405_10002595 3300031731 Bacteria 8014
117 Ga0307413_10028668 3300031824 Bacteria 3104
118 Ga0307410_10088083 3300031852 Bacteria 2197
119 Ga0307410_10896066 3300031852 Bacteria 760
120 Ga0307406_10023493 3300031901 Bacteria 3669
121 Ga0307407_10313262 3300031903 Bacteria 1098
122 Ga0307409_100187501 3300031995 Bacteria 1837
123 Ga0307409_100779319 3300031995 Bacteria 962
124 Ga0307416_100004044 3300032002 Bacteria 8762
125 Ga0307416_100007496 3300032002 Bacteria 6945
126 Ga0307416_101251951 3300032002 Bacteria 848
127 Ga0307414_10317588 3300032004 Bacteria 1324
128 Ga0307411_10009671 3300032005 Bacteria 5087
129 Ga0307411_11283827 3300032005 Bacteria 666
130 Ga0307415_100501299 3300032126 Bacteria 1061
131 Ga0307510_10000042 3300033180 Bacteria 100951
132 Ga0373934_0035142 3300035086 Bacteria 1971
133 Ga0373923_0613010 3300035111 Bacteria 537
134 Ga0373945_0017465 3300035116 Bacteria 2430
135 Ga0373943_0036778 3300035170 Bacteria 2346
136 Ga0373924_0003476 3300035410 Bacteria 5425
137 Ga0373927_0090254 3300035695 Bacteria 1990
138 Ga0373927_0328036 3300035695 Bacteria 1008
139 Ga0373947_0022193 3300035725 Bacteria 3678
140 Ga0373947_1107318 3300035725 Bacteria 540
141 Ga0373937_1079401 3300036401 Bacteria 752
142 Ga0373925_0052092 3300037068 Bacteria 3058
143 Ga0373925_0106771 3300037068 Bacteria 2159
144 Ga0395899_0158166 3300037312 Unclassified 1602
145 Ga0395900_0041151 3300037418 Bacteria 4765
146 Ga0395898_0791751 3300037466 Bacteria 889
147 Ga0466972_0005266 3300044658 Bacteria 6476
148 Ga0466965_0000348 3300044683 Bacteria 15647
149 Ga0466963_0470528 3300044694 Unclassified 887
150 Ga0466968_0001187 3300044735 Bacteria 9224
151 Ga0466970_0314262 3300044765 Bacteria 885
152 Ga0466970_0746595 3300044765 Bacteria 572
153 Ga0466960_0015611 3300044901 Bacteria 3277
154 Ga0466959_0492089 3300045049 Unclassified 829
155 Ga0466958_0136285 3300045836 Bacteria 1544
156 Ga0466967_0624961 3300045976 Bacteria 1064
157 Ga0495603_0321256 3300046455 Bacteria 889
158 Ga0495580_0021708 3300046472 Bacteria 4735
159 Ga0495605_0087475 3300046474 Bacteria 1449
160 Ga0495605_0105048 3300046474 Bacteria 1294
161 Ga0495584_0021016 3300046491 Bacteria 3315
162 Ga0495585_0030110 3300046492 Bacteria 3088
163 Ga0495594_0423258 3300046499 Bacteria 757
164 Ga0495607_0140313 3300046501 Bacteria 1247
165 Ga0495631_0130629 3300046518 Bacteria 1079
166 Ga0495637_0140446 3300046520 Bacteria 917
167 Ga0495654_0021179 3300046530 Bacteria 3384
168 Ga0495597_0088041 3300046542 Bacteria 1321
169 Ga0495597_0178160 3300046542 Bacteria 860
170 Ga0495622_0003536 3300046557 Bacteria 7349
171 Ga0495633_0064424 3300046558 Bacteria 1713
172 Ga0495667_0312769 3300046559 Unclassified 994
173 Ga0495661_0029707 3300046665 Bacteria 3487
174 Ga0495661_0157625 3300046665 Bacteria 1221
175 Ga0495661_0504722 3300046665 Bacteria 576
176 Ga0495588_0151670 3300046674 Bacteria 1225
177 Ga0495670_0185305 3300046691 Bacteria 1100
178 Ga0495670_0189062 3300046691 Bacteria 1089
179 Ga0495649_0024409 3300046694 Bacteria 3372
180 Ga0495589_0062793 3300046794 Bacteria 1822
181 Ga0495660_0334385 3300046810 Bacteria 677
182 Ga0495676_0076472 3300047321 Bacteria 2556
183 Ga0495683_0021677 3300047323 Bacteria 3309
184 Ga0495614_0217234 3300048089 Bacteria 868
185 Ga0495626_0051159 3300048091 Bacteria 1906
186 Ga0496100_0017974 3300048903 Bacteria 4185
187 Ga0496101_0002479 3300048904 Bacteria 11334
188 Ga0496101_0800517 3300048904 Bacteria 743
189 Ga0496102_0090458 3300048905 Bacteria 2832
190 Ga0496103_0035537 3300048906 Bacteria 3050
191 Ga0496103_0952940 3300048906 Bacteria 536
192 Ga0496104_0000659 3300048907 Bacteria 29622
193 Ga0496105_0005932 3300048908 Bacteria 9320
194 Ga0496106_0001826 3300048909 Bacteria 15928
195 Ga0496107_0004991 3300048910 Bacteria 9034
196 Ga0496108_0006943 3300048911 Bacteria 9167
197 Ga0496108_0053756 3300048911 Bacteria 3378
198 Ga0496109_0000938 3300048912 Bacteria 24150
199 Ga0496109_0143912 3300048912 Bacteria 2230
200 Ga0496110_0008668 3300048913 Bacteria 8190
201 Ga0496110_0044920 3300048913 Bacteria 3859
202 Ga0496110_0072759 3300048913 Bacteria 3050
203 Ga0496110_0708553 3300048913 Bacteria 908
204 Ga0496111_0000425 3300048914 Bacteria 21295
205 Ga0496111_0042258 3300048914 Bacteria 3273
206 Ga0496112_0071402 3300048915 Bacteria 3431
207 Ga0496112_0728992 3300048915 Bacteria 918
208 Ga0496113_0003303 3300048916 Bacteria 9627
209 Ga0496113_1406751 3300048916 Bacteria 540
210 Ga0496114_0216239 3300048917 Bacteria 1682
211 Ga0496116_0013462 3300048919 Bacteria 6593
212 Ga0496116_0420558 3300048919 Bacteria 584
213 Ga0496117_0043680 3300048920 Bacteria 3256
214 Ga0496118_0194890 3300048921 Bacteria 1207
215 Ga0496119_0000670 3300048922 Bacteria 45979
216 Ga0496119_0399080 3300048922 Bacteria 656
217 Ga0496121_0224607 3300048924 Bacteria 1320
218 Ga0496121_0712831 3300048924 Bacteria 602
219 Ga0496122_0032254 3300048925 Bacteria 4336
220 Ga0496123_0023656 3300048926 Bacteria 4696
221 Ga0496125_0010559 3300048928 Bacteria 9335
222 Ga0496126_0105711 3300048929 Bacteria 2457
223 Ga0501305_000309 3300049161 Bacteria 3813
224 Ga0501305_009306 3300049161 Bacteria 1289
225 Ga0501312_003832 3300049528 Bacteria 1736
226 Ga0501315_006470 3300049531 Bacteria 1305
227 Ga0501317_001131 3300049533 Bacteria 2211
228 Ga0501040_0454704 3300049576 Bacteria 922
229 Ga0501046_0457005 3300049580 Bacteria 918
230 Ga0501069_0411531 3300049585 Bacteria 801
231 Ga0501217_025788 3300049661 Bacteria 1417
232 Ga0501233_198645 3300049668 Bacteria 583
233 Ga0501257_051475 3300049686 Unclassified 1027
234 Ga0501225_0252992 3300049705 Bacteria 580
235 Ga0501266_033924 3300049763 Bacteria 738
236 nmdc:mga0qj67_130244_c1 3300050509 Bacteria 2037
237 nmdc:mga06r32_157456_c1 3300050510 Bacteria 2253
238 nmdc:mga0rr50_389153_c1 3300050513 Bacteria 1176
239 Ga0495619_0887163 3300053085 Bacteria 600
240 2511698353 2511231119 Bacteria 4019861
241 2512637686 2512564013 Bacteria 6286191
242 2540605583 2540341094 Bacteria 4061186
243 2545558449 2545555800 Bacteria 4222588
244 2555470614 2554235283 Bacteria 3683090
245 2578932898 2576861599 Bacteria 4217202
246 2631982670 2630968484 Bacteria 3876276
247 2644718551 2643221731 Bacteria 5623886
248 2644724373 2643221732 Bacteria 5756404
249 2644741628 2643221735 Bacteria 3676263
250 2651532389 2648501850 Bacteria 3975476
251 2672333737 2671180330 Bacteria 5521719
252 2674420713 2671180844 Bacteria 4164150
253 2686995695 2684623153 Bacteria 3878815
254 2687496956 2687453109 Bacteria 3860091
255 2695630259 2695420354 Bacteria 3922431
256 2717917830 2716884898 Bacteria 3928789
257 2808871356 2808606364 Bacteria 4465927
258 2809055242 2808606399 Bacteria 4021018
259 2812314855 2811994870 Bacteria 3776934
260 2816861201 2816332186 Bacteria 5331395
261 2817478639 2816332295 Bacteria 4352468
262 2819712112 2818991465 Bacteria 5388835
263 2819725957 2818991468 Bacteria 3723169
264 2823526825 2823526263 Bacteria 3765752
265 2842688462 2842682962 Bacteria 5589973
266 2842887975 2842882022 Bacteria 6158489
267 2849145375 2849139964 Bacteria 5613304
268 2857586750 2857581216 Bacteria 5522813
269 2857608102 2857604169 Bacteria 5111450
270 2857613083 2857609550 Bacteria 3753890
271 2860837962 2860837431 Bacteria 4202080
272 2877769144 2877768649 Bacteria 3957164
273 2880170081 2880169592 Bacteria 3900066
274 2897110109 2897109615 Bacteria 4009619
275 2904530225 2904524088 Bacteria 5887454
276 2904562601 2904560550 Bacteria 4029838
277 2908668889 2908665501 Bacteria 3678115
278 2915599022 2915597211 Bacteria 6475886
279 2919096392 2919093281 Bacteria 3660974
280 2919149499 2919143609 Bacteria 6219228
281 2919523061 2919517244 Bacteria 5858162
282 2919726217 2919720352 Bacteria 5986006
283 2919730125 2919726948 Bacteria 3696050
284 2928099728 2928093941 Bacteria 5965005
285 2929010377 2929004312 Bacteria 5678476
286 2929184155 2929183550 Bacteria 6377511
287 2954775681 2954773129 Bacteria 3741715
288 2960323179 2960319331 Bacteria 5502575
289 2960379948 2960375949 Bacteria 5361395
290 2962291269 2962290636 Bacteria 4072939
291 2969137381 2969136845 Bacteria 3923176
292 2969141523 2969141011 Bacteria 4118468
293 2969769876 2969765954 Bacteria 4216713
294 2969773725 2969770375 Bacteria 4271280
295 2971893890 2971893375 Bacteria 3929648
296 2977255062 2977254563 Bacteria 4828420
297 2980493131 2980492589 Bacteria 4072961
298 2990276038 2990275345 Bacteria 4887158
299 3001271179 3001267043 Bacteria 4823521
300 3001276795 3001272096 Bacteria 4729684
301 3006827027 3006826541 Bacteria 4678913
302 3006858961 3006858327 Bacteria 4317835
303 3006882049 3006879489 Bacteria 4064221
304 3006969125 3006969106 Bacteria 4739423
305 3006987169 3006984091 Bacteria 4207523
306 3006991447 3006988479 Bacteria 4767936
307 8022634194 8022630665 Bacteria 3886130
308 8022653236 8022653035 Bacteria 4035078
309 8022896399 8022893055 Bacteria 5300455
310 8022918143 8022914991 Bacteria 5584517
311 8051955844 8051952484 Bacteria 3926774
312 8052177820 8052174270 Bacteria 3881265
313 8054283466 8054280661 Bacteria 4232245
314 8057632703 8057632132 Bacteria 4726859
315 Ga0451804_0851958
316 JGI24740J21852_10012734
317 JGI25151J46595_10000175
318 JGI25151J46595_10011551
319 rootH1_10003483
320 rootH2_10103692
321 rootL2_10001823
322 rootL2_10378576
323 rootH1_10037174
324 Ga0006562J51391_1000499
325 Ga0006562J51391_1000504
326 Ga0055532_1013272
327 Ga0055528_1003395
328 Ga0058859_10888696
329 Ga0065712_10076639
330 Ga0065715_10789880
331 Ga0070676_10527385
332 Ga0070676_10533581
333 Ga0070690_100225470
334 Ga0070687_100308938
335 Ga0070668_100504167
336 Ga0070669_100258912
337 Ga0070675_101024798
338 Ga0070671_100083596
339 Ga0070674_100039289
340 Ga0070673_101511678
341 Ga0070703_10365848
342 Ga0070713_100831215
343 Ga0070705_100361436
344 Ga0070694_100419548
345 Ga0070708_100121713
346 Ga0070678_101756482
347 Ga0068867_101088384
348 Ga0070706_100140924
349 Ga0070684_100113408
350 Ga0070672_100175417
351 Ga0070686_100025445
352 Ga0070686_100050211
353 Ga0070695_100358573
354 Ga0070696_100123607
355 Ga0070665_100230441
356 Ga0068864_100697642
357 Ga0068860_100019634
358 Ga0068862_100770483
359 Ga0075432_10056285
360 Ga0068871_100482353
361 Ga0075428_100051466
362 Ga0075428_100094424
363 Ga0075430_100564617
364 Ga0075431_100163808
365 Ga0075434_101026899
366 Ga0075434_101304940
367 Ga0075429_101626414
368 Ga0105251_10168684
369 Ga0105244_10130372
370 Ga0105244_10143875
371 Ga0105250_10088401
372 Ga0105250_10105697
373 Ga0105240_10009313
374 Ga0105245_10145140
375 Ga0105247_10012083
376 Ga0105243_10001583
377 Ga0105242_10009438
378 Ga0105249_11192201
379 Ga0105239_10145431
380 Ga0105246_10000668
381 Ga0157371_10168372
382 Ga0157374_10187866
383 Ga0157378_10017003
384 Ga0157372_10843396
385 Ga0157372_11606674
386 Ga0163163_10075795
387 Ga0163163_12067895
388 Ga0157380_10120681
389 Ga0157377_10003353
390 Ga0157376_10119082
391 Ga0209147_102205
392 Ga0209673_1002457
393 Ga0209676_1045897
394 Ga0209025_1000031
395 Ga0209025_1050727
396 Ga0209025_1084677
397 Ga0207426_1005225
398 Ga0207696_1010032
399 Ga0207655_1021893
400 Ga0207655_1248181
401 Ga0207713_1000851
402 Ga0207710_10008059
403 Ga0207645_10161847
404 Ga0207684_10107868
405 Ga0207695_10000446
406 Ga0207659_11083623
407 Ga0207687_10221061
408 Ga0207700_10697735
409 Ga0207644_10383464
410 Ga0207686_10084356
411 Ga0207709_10004178
412 Ga0207669_10048431
413 Ga0207669_10200304
414 Ga0207691_10156098
415 Ga0207712_10628906
416 Ga0207703_10917346
417 Ga0207708_11318909
418 Ga0207676_10659893
419 Ga0207675_102052030
420 Ga0209371_1003188
421 Ga0268266_10153389
422 Ga0268265_10676196
423 Ga0268264_10007291
424 Ga0311003_100182
425 Ga0310982_101614
426 Ga0268256_1002875
427 Ga0307513_10043529
428 Ga0307408_100030965
429 Ga0307408_101962295
430 Ga0307405_10002595
431 Ga0307413_10028668
432 Ga0307410_10088083
433 Ga0307410_10896066
434 Ga0307406_10023493
435 Ga0307407_10313262
436 Ga0307409_100187501
437 Ga0307409_100779319
438 Ga0307416_100004044
439 Ga0307416_100007496
440 Ga0307416_101251951
441 Ga0307414_10317588
442 Ga0307411_10009671
443 Ga0307411_11283827
444 Ga0307415_100501299
445 Ga0307510_10000042
446 Ga0373934_0035142
447 Ga0373923_0613010
448 Ga0373945_0017465
449 Ga0373943_0036778
450 Ga0373924_0003476
451 Ga0373927_0090254
452 Ga0373927_0328036
453 Ga0373947_0022193
454 Ga0373947_1107318
455 Ga0373937_1079401
456 Ga0373925_0052092
457 Ga0373925_0106771
458 Ga0395899_0158166
459 Ga0395900_0041151
460 Ga0395898_0791751
461 Ga0466972_0005266
462 Ga0466965_0000348
463 Ga0466963_0470528
464 Ga0466968_0001187
465 Ga0466970_0314262
466 Ga0466970_0746595
467 Ga0466960_0015611
468 Ga0466959_0492089
469 Ga0466958_0136285
470 Ga0466967_0624961
471 Ga0495603_0321256
472 Ga0495580_0021708
473 Ga0495605_0087475
474 Ga0495605_0105048
475 Ga0495584_0021016
476 Ga0495585_0030110
477 Ga0495594_0423258
478 Ga0495607_0140313
479 Ga0495631_0130629
480 Ga0495637_0140446
481 Ga0495654_0021179
482 Ga0495597_0088041
483 Ga0495597_0178160
484 Ga0495622_0003536
485 Ga0495633_0064424
486 Ga0495667_0312769
487 Ga0495661_0029707
488 Ga0495661_0157625
489 Ga0495661_0504722
490 Ga0495588_0151670
491 Ga0495670_0185305
492 Ga0495670_0189062
493 Ga0495649_0024409
494 Ga0495589_0062793
495 Ga0495660_0334385
496 Ga0495676_0076472
497 Ga0495683_0021677
498 Ga0495614_0217234
499 Ga0495626_0051159
500 Ga0496100_0017974
501 Ga0496101_0002479
502 Ga0496101_0800517
503 Ga0496102_0090458
504 Ga0496103_0035537
505 Ga0496103_0952940
506 Ga0496104_0000659
507 Ga0496105_0005932
508 Ga0496106_0001826
509 Ga0496107_0004991
510 Ga0496108_0006943
511 Ga0496108_0053756
512 Ga0496109_0000938
513 Ga0496109_0143912
514 Ga0496110_0008668
515 Ga0496110_0044920
516 Ga0496110_0072759
517 Ga0496110_0708553
518 Ga0496111_0000425
519 Ga0496111_0042258
520 Ga0496112_0071402
521 Ga0496112_0728992
522 Ga0496113_0003303
523 Ga0496113_1406751
524 Ga0496114_0216239
525 Ga0496116_0013462
526 Ga0496116_0420558
527 Ga0496117_0043680
528 Ga0496118_0194890
529 Ga0496119_0000670
530 Ga0496119_0399080
531 Ga0496121_0224607
532 Ga0496121_0712831
533 Ga0496122_0032254
534 Ga0496123_0023656
535 Ga0496125_0010559
536 Ga0496126_0105711
537 Ga0501305_000309
538 Ga0501305_009306
539 Ga0501312_003832
540 Ga0501315_006470
541 Ga0501317_001131
542 Ga0501040_0454704
543 Ga0501046_0457005
544 Ga0501069_0411531
545 Ga0501217_025788
546 Ga0501233_198645
547 Ga0501257_051475
548 Ga0501225_0252992
549 Ga0501266_033924
550 nmdc:mga0qj67_130244_c1
551 nmdc:mga06r32_157456_c1
552 nmdc:mga0rr50_389153_c1
553 Ga0495619_0887163
554 2511698353
555 2512637686
556 2540605583
557 2545558449
558 2555470614
559 2578932898
560 2631982670
561 2644718551
562 2644724373
563 2644741628
564 2651532389
565 2672333737
566 2674420713
567 2686995695
568 2687496956
569 2695630259
570 2717917830
571 2808871356
572 2809055242
573 2812314855
574 2816861201
575 2817478639
576 2819712112
577 2819725957
578 2823526825
579 2842688462
580 2842887975
581 2849145375
582 2857586750
583 2857608102
584 2857613083
585 2860837962
586 2877769144
587 2880170081
588 2897110109
589 2904530225
590 2904562601
591 2908668889
592 2915599022
593 2919096392
594 2919149499
595 2919523061
596 2919726217
597 2919730125
598 2928099728
599 2929010377
600 2929184155
601 2954775681
602 2960323179
603 2960379948
604 2962291269
605 2969137381
606 2969141523
607 2969769876
608 2969773725
609 2971893890
610 2977255062
611 2980493131
612 2990276038
613 3001271179
614 3001276795
615 3006827027
616 3006858961
617 3006882049
618 3006969125
619 3006987169
620 3006991447
621 8022634194
622 8022653236
623 8022896399
624 8022918143
625 8051955844
626 8052177820
627 8054283466
628 8057632703

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

35

136

0.86

PF13581

HATPase_c_2

Histidine kinase-like ATPase domain

10

131

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gez-assembly1.cif.gz_A crystal structure of potassium-independent plant asparaginase 0.9531 16 49
6m36-assembly1.cif.gz_G the crystal structure of b. subtilis rsbv/rsbw complex in the monoclinic crystal form 0.8591 6 134
6m36-assembly2.cif.gz_I the crystal structure of b. subtilis rsbv/rsbw complex in the monoclinic crystal form 0.8491 6 134
6m36-assembly2.cif.gz_O the crystal structure of b. subtilis rsbv/rsbw complex in the monoclinic crystal form 0.8473 8 134
1thn-assembly1.cif.gz_A crystal structures of the adp and atp bound forms of the bacillus anti-sigma factor spoiiab in complex with the anti-anti-sigma spoiiaa: inhibitory complex with adp, crystal form i 0.8444 5 133
ID Description Score Start End Superfamily
1tidC00 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8166 6 133 3.30.565.10
1tidC00 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8052 6 133 3.30.565.10
3ke6B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.786 4 133 3.30.565.10
3sl2A00 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.7595 39 134 3.30.565.10
af_P9WLZ7_398_539_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.7586 4 133 3.30.565.10
ID Description Score Start End GO Terms
AF-A4VGB2-F1-model_v4 Histidine kinase/HSP90-like ATPase domain-containing protein 0.9881 1 134
AF-A0A7K3G6T1-F1-model_v4 Anti-sigma regulatory factor 0.9875 7 135
AF-A0A7H8KMR4-F1-model_v4 Anti-sigma regulatory factor 0.9853 2 134
AF-A0A2Z3V6U4-F1-model_v4 Anti-sigma regulatory factor 0.9849 22 134
AF-A0A1Q7VV87-F1-model_v4 Anti-sigma regulatory factor 0.9845 10 135

Map