F402570

General Info

Members Datasets Scaffolds Average Seq Length
314 249 249 372

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10094992|Ga0070681_100949922
Length 415
Sequence MSDNRHVPFLDLQTPHAALRDELLAVVERALASGGFVGGREVDAFEREFAEFCGVRHCVGVGSGTDALRFALIAAGVRPGDTVVTVPNTFIATAEAISQAGARPLFVDVDEQTCTMDPGQLRRLLESAGPRDESGRVVSARTGTPIAAVVPVHLFGQMADMDPILELAAEFNLTVVEDACQAHGAEYFSARSGRWMKAGSMGRAAAFSFYPGKNLGACGEAGAVTTDSDDIARACRMIRDHGQSQKYQHEIVGYNGRLDAIQAGFLRVKLGRLAEWNEARRRHARSYERLLRDAGDRVVLPHTPSWSRPVFHLYVVRVAERERVQRCLSAAGIGTGIHYPIPIHLSTAYEDLVYTRGDFPIAERQALEVLSLPMFAELTIEAQERVASELVDAVGVNARASDTAFAIGDAAPAVA

Samples

Sample ID Description Type Environment
1 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
2 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
3 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
4 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
5 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
6 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
7 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
8 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
9 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
10 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
11 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
12 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
13 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
14 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
15 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
16 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
17 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
18 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
19 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
20 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
21 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
22 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
23 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
24 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
25 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
26 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
27 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
28 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
29 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
30 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
31 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
32 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
33 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
34 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
35 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
36 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
37 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
38 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
39 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
40 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
41 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
42 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
43 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
44 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
45 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
46 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
47 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
48 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
49 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
50 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
51 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
52 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
53 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
54 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
55 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
56 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
57 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
58 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
59 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
60 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
61 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
62 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
63 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
64 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
65 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
67 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
68 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
69 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
70 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
71 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
72 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
73 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
74 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
75 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
76 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
77 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
78 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
79 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
80 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
81 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
82 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
83 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
84 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
85 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
86 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
87 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
88 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
89 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
90 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
91 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
92 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
93 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
94 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
95 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
96 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
97 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
98 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
99 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
100 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
101 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
102 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
103 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
104 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
105 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
106 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
107 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
108 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
109 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
110 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
111 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
112 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
113 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
114 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
115 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
116 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
117 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
118 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
119 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
120 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
121 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
122 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
123 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
124 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
125 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
126 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
127 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
128 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
129 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
130 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
131 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
155 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
156 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
157 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
158 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
160 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
161 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
162 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
163 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
164 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
165 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
166 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
167 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
168 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
169 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
170 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
171 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
172 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
173 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
174 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
175 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
176 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
177 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
178 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
179 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
180 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
181 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
182 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
183 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
184 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
185 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
186 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
187 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
188 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
189 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
190 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
191 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
192 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
193 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
194 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
195 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
196 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
197 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
198 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
199 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
200 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
201 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
202 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
203 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
204 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
205 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
206 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
207 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
208 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
209 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
210 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
211 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
212 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
213 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
215 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
218 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
221 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
222 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
223 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
224 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
225 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
227 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
228 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
229 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
230 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
231 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
232 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
233 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
234 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
235 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
236 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
237 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
238 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
239 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
240 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
241 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
242 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
243 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
244 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
245 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
246 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
247 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
248 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
249 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 78.98
Metatranscriptomes 0.32
Isolates 20.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.41
Nodule 16.24
Rhizoplane 3.18
Rhizosphere 62.74
Stem 0
Stem Tuber 0
Unclassified 12.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002510 3300003203 Bacteria 8686
2 JGI25165J46597_1000013 3300003214 Bacteria 402100
3 rootH1_10109870 3300003316 Bacteria 2455
4 rootH2_10033390 3300003320 Bacteria 17641
5 rootL2_10057350 3300003322 Bacteria 23561
6 Ga0058863_10045605 3300004799 Bacteria 1646
7 Ga0070658_10128895 3300005327 Bacteria 2107
8 Ga0070676_10014295 3300005328 Bacteria 4361
9 Ga0070683_100031365 3300005329 Bacteria 4832
10 Ga0070683_100304404 3300005329 Bacteria 1516
11 Ga0070690_100068364 3300005330 Bacteria 2304
12 Ga0070670_100303311 3300005331 Unclassified 1397
13 Ga0068868_100015496 3300005338 Bacteria 5640
14 Ga0070691_10037227 3300005341 Bacteria 2295
15 Ga0070669_100086491 3300005353 Bacteria 2342
16 Ga0070673_100050354 3300005364 Bacteria 3256
17 Ga0070709_10000151 3300005434 Bacteria 45531
18 Ga0070709_10002409 3300005434 Bacteria 10139
19 Ga0070714_100001928 3300005435 Bacteria 15153
20 Ga0070710_10000079 3300005437 Bacteria 43931
21 Ga0070701_10005795 3300005438 Bacteria 5143
22 Ga0070711_100001948 3300005439 Bacteria 11574
23 Ga0070700_100003849 3300005441 Bacteria 7786
24 Ga0070694_100011033 3300005444 Bacteria 5590
25 Ga0070681_10062292 3300005458 Bacteria 3704
26 Ga0070681_10094992 3300005458 Bacteria 2930
27 Ga0070681_10117281 3300005458 Archaea 2598
28 Ga0068867_100011394 3300005459 Bacteria 6274
29 Ga0070706_100001468 3300005467 Bacteria 24789
30 Ga0070706_100009764 3300005467 Bacteria 8918
31 Ga0070706_100026021 3300005467 Bacteria 5384
32 Ga0070707_100228313 3300005468 Bacteria 1813
33 Ga0070698_100030935 3300005471 Bacteria 5551
34 Ga0070698_100032197 3300005471 Bacteria 5431
35 Ga0070698_100075214 3300005471 Bacteria 3382
36 Ga0070698_100103197 3300005471 Unclassified 2822
37 Ga0070699_100240866 3300005518 Bacteria 1615
38 Ga0070679_100157379 3300005530 Bacteria 2247
39 Ga0070672_100053532 3300005543 Bacteria 3155
40 Ga0070695_100189851 3300005545 Bacteria 1461
41 Ga0070696_100099178 3300005546 Bacteria 2084
42 Ga0070665_100029545 3300005548 Bacteria 5517
43 Ga0068855_100018328 3300005563 Bacteria 8409
44 Ga0068855_100031048 3300005563 Bacteria 6384
45 Ga0068854_100073195 3300005578 Bacteria 2511
46 Ga0068856_100013215 3300005614 Bacteria 7995
47 Ga0070702_100001190 3300005615 Bacteria 10503
48 Ga0068861_100077013 3300005719 Bacteria 2600
49 Ga0068863_100352608 3300005841 Bacteria 1433
50 Ga0081455_10075903 3300005937 Bacteria 2771
51 Ga0081455_10161541 3300005937 Bacteria 1716
52 Ga0081540_1021455 3300005983 Bacteria 3844
53 Ga0081540_1027965 3300005983 Bacteria 3180
54 Ga0081539_10000116 3300005985 Bacteria 186861
55 Ga0081539_10002985 3300005985 Bacteria 22181
56 Ga0081539_10072706 3300005985 Bacteria 1837
57 Ga0075368_10012117 3300006042 Bacteria 3149
58 Ga0070716_100127060 3300006173 Bacteria 1605
59 Ga0070712_100008831 3300006175 Bacteria 6345
60 Ga0075367_10012017 3300006178 Bacteria 4600
61 Ga0075366_10072380 3300006195 Bacteria 2054
62 Ga0097621_100003631 3300006237 Bacteria 10666
63 Ga0075370_10001888 3300006353 Bacteria 9407
64 Ga0068871_100040752 3300006358 Bacteria 3721
65 Ga0075428_100331523 3300006844 Bacteria 1634
66 Ga0075431_100048246 3300006847 Bacteria 4392
67 Ga0075433_10005172 3300006852 Bacteria 10222
68 Ga0075433_10071149 3300006852 Unclassified 3058
69 Ga0075433_10077143 3300006852 Bacteria 2935
70 Ga0075434_100049809 3300006871 Bacteria 4160
71 Ga0075436_100008823 3300006914 Bacteria 6895
72 Ga0099824_1017472 3300006942 Bacteria 6199
73 Ga0075435_100046468 3300007076 Bacteria 3482
74 Ga0105240_10060088 3300009093 Bacteria 4740
75 Ga0111539_10006463 3300009094 Bacteria 15100
76 Ga0111539_10015233 3300009094 Bacteria 9580
77 Ga0111539_10124229 3300009094 Unclassified 3025
78 Ga0114129_10007501 3300009147 Bacteria 15535
79 Ga0114129_10143895 3300009147 Unclassified 3267
80 Ga0105241_10044686 3300009174 Bacteria 3357
81 Ga0157370_10034821 3300013104 Bacteria 4900
82 Ga0157369_10013077 3300013105 Bacteria 9397
83 Ga0214544_1000006 3300021320 Bacteria 380728
84 Ga0214542_1000002 3300021321 Bacteria 720798
85 Ga0214545_1000002 3300021324 Bacteria 727485
86 Ga0214543_1000385 3300021327 Bacteria 71757
87 Ga0213876_10061286 3300021384 Bacteria 1985
88 Ga0213875_10000602 3300021388 Bacteria 29132
89 Ga0213875_10001470 3300021388 Bacteria 15229
90 Ga0213875_10005915 3300021388 Bacteria 6494
91 Ga0209233_1000013 3300025261 Bacteria 1013785
92 Ga0209233_1000952 3300025261 Bacteria 12546
93 Ga0209758_1003139 3300025297 Bacteria 15550
94 Ga0207692_10000120 3300025898 Bacteria 23535
95 Ga0207699_10000407 3300025906 Bacteria 22135
96 Ga0207645_10046595 3300025907 Bacteria 2769
97 Ga0207684_10004407 3300025910 Bacteria 13269
98 Ga0207684_10009100 3300025910 Bacteria 8796
99 Ga0207654_10045433 3300025911 Bacteria 2499
100 Ga0207707_10017168 3300025912 Bacteria 6307
101 Ga0207707_10087482 3300025912 Bacteria 2722
102 Ga0207707_10125367 3300025912 Archaea 2246
103 Ga0207707_10130598 3300025912 Bacteria 2197
104 Ga0207695_10116511 3300025913 Bacteria 2645
105 Ga0207695_10207813 3300025913 Bacteria 1870
106 Ga0207693_10067108 3300025915 Bacteria 2809
107 Ga0207663_10004786 3300025916 Bacteria 6761
108 Ga0207646_10108040 3300025922 Bacteria 2496
109 Ga0207681_10134516 3300025923 Bacteria 1832
110 Ga0207664_10003017 3300025929 Bacteria 11194
111 Ga0207665_10000442 3300025939 Bacteria 28379
112 Ga0207665_10034742 3300025939 Bacteria 3345
113 Ga0207661_10000243 3300025944 Bacteria 35463
114 Ga0207661_10021484 3300025944 Bacteria 4836
115 Ga0207667_10016334 3300025949 Bacteria 8389
116 Ga0207640_10206672 3300025981 Bacteria 1492
117 Ga0207677_10004999 3300026023 Bacteria 7160
118 Ga0207708_10000915 3300026075 Bacteria 22111
119 Ga0207702_10021985 3300026078 Bacteria 5284
120 Ga0207641_10165090 3300026088 Bacteria 2016
121 Ga0207648_10003983 3300026089 Bacteria 15334
122 Ga0207676_10062100 3300026095 Bacteria 2962
123 Ga0207675_100023003 3300026118 Bacteria 5797
124 Ga0209389_1000176 3300027296 Bacteria 50202
125 Ga0209589_1000410 3300027357 Bacteria 58809
126 Ga0209489_100748 3300027361 Bacteria 64047
127 Ga0207428_10034032 3300027907 Bacteria 4178
128 Ga0268266_10028049 3300028379 Bacteria 4787
129 Ga0265319_1000759 3300028563 Bacteria 20989
130 Ga0265320_10006394 3300031240 Bacteria 7430
131 Ga0265339_10004640 3300031249 Bacteria 9342
132 Ga0265316_10162657 3300031344 Bacteria 1668
133 Ga0307513_10082658 3300031456 Bacteria 3306
134 Ga0307408_100022441 3300031548 Bacteria 4289
135 Ga0307408_100322064 3300031548 Bacteria 1302
136 Ga0307408_100433377 3300031548 Bacteria 1136
137 Ga0307508_10000014 3300031616 Bacteria 226567
138 Ga0307405_10010459 3300031731 Bacteria 4810
139 Ga0307405_10238524 3300031731 Bacteria 1345
140 Ga0307410_10022988 3300031852 Bacteria 3866
141 Ga0307406_10010184 3300031901 Bacteria 5297
142 Ga0307412_10001701 3300031911 Bacteria 12159
143 Ga0307412_10111921 3300031911 Bacteria 1951
144 Ga0307409_100000641 3300031995 Bacteria 15446
145 Ga0307409_100027711 3300031995 Bacteria 4021
146 Ga0307416_100035188 3300032002 Bacteria 3821
147 Ga0307416_100165052 3300032002 Bacteria 2053
148 Ga0307414_10279403 3300032004 Bacteria 1402
149 Ga0307415_100005192 3300032126 Bacteria 6879
150 Ga0373927_0092882 3300035695 Bacteria 1960
151 Ga0373937_0010619 3300036401 Bacteria 8047
152 Ga0373937_0037320 3300036401 Bacteria 4428
153 Ga0373925_0000605 3300037068 Bacteria 34184
154 Ga0373925_0007503 3300037068 Bacteria 7951
155 Ga0395899_0001011 3300037312 Bacteria 25761
156 Ga0395899_0081339 3300037312 Bacteria 2357
157 Ga0395898_0012498 3300037466 Bacteria 8778
158 Ga0395898_0035887 3300037466 Bacteria 4927
159 Ga0436364_0112641 3300037853 Bacteria 82637
160 Ga0436364_0199539 3300037853 Bacteria 16232
161 Ga0436364_0564409 3300037853 Bacteria 26112
162 Ga0436364_1024535 3300037853 Bacteria 3312
163 Ga0395901_0150406 3300038443 Bacteria 2446
164 Ga0436365_0248557 3300039437 Bacteria 42994
165 Ga0436365_1436446 3300039437 Bacteria 2893
166 Ga0436365_1450461 3300039437 Bacteria 1656
167 Ga0436365_1835153 3300039437 Bacteria 2115
168 Ga0436365_1934552 3300039437 Bacteria 10888
169 Ga0436360_0390083 3300039438 Bacteria 3079
170 Ga0436361_0404750 3300039447 Unclassified 2175
171 Ga0436361_0995512 3300039447 Bacteria 2918
172 Ga0439442_000018 3300042002 Bacteria 44170
173 Ga0439458_0010748 3300042157 Bacteria 2043
174 Ga0466972_0067583 3300044658 Bacteria 1707
175 Ga0453683_0009013 3300044673 Bacteria 6664
176 Ga0451576_0000203 3300045051 Bacteria 149655
177 Ga0451576_0127724 3300045051 Bacteria 2649
178 Ga0466967_0000349 3300045976 Bacteria 21303
179 Ga0466967_0171496 3300045976 Bacteria 2042
180 Ga0466967_0294958 3300045976 Bacteria 1559
181 Ga0495592_0041512 3300046454 Bacteria 3448
182 Ga0495592_0059314 3300046454 Bacteria 2818
183 Ga0495629_0028950 3300046459 Bacteria 3932
184 Ga0495641_0046929 3300046461 Bacteria 1985
185 Ga0495651_0063434 3300046462 Bacteria 2824
186 Ga0495653_0070076 3300046463 Bacteria 2625
187 Ga0495653_0151040 3300046463 Bacteria 1623
188 Ga0495628_0076427 3300046516 Bacteria 2606
189 Ga0495640_0022076 3300046533 Bacteria 4661
190 Ga0495640_0159723 3300046533 Bacteria 1445
191 Ga0495586_0065238 3300046535 Bacteria 1985
192 Ga0495667_0004553 3300046559 Bacteria 9362
193 Ga0495634_0046062 3300046642 Bacteria 2945
194 Ga0495588_0029406 3300046674 Bacteria 2756
195 Ga0495623_0009663 3300046679 Bacteria 6263
196 Ga0495680_0066952 3300047322 Bacteria 2747
197 Ga0495680_0105695 3300047322 Bacteria 2093
198 Ga0495675_0064132 3300047444 Bacteria 2324
199 Ga0495675_0180262 3300047444 Bacteria 1293
200 Ga0495684_0146235 3300047471 Bacteria 1770
201 Ga0496102_0000330 3300048905 Bacteria 58719
202 Ga0496102_0003234 3300048905 Bacteria 13820
203 Ga0496102_0043136 3300048905 Bacteria 4089
204 Ga0496103_0097798 3300048906 Bacteria 1855
205 Ga0496104_0055835 3300048907 Bacteria 3734
206 Ga0496105_0040153 3300048908 Bacteria 3858
207 Ga0496106_0149262 3300048909 Bacteria 1843
208 Ga0496112_0250043 3300048915 Bacteria 1724
209 Ga0496114_0012748 3300048917 Bacteria 6732
210 Ga0496114_0013783 3300048917 Bacteria 6479
211 Ga0496126_0105417 3300048929 Bacteria 2462
212 Ga0496126_0123815 3300048929 Bacteria 2239
213 Ga0501032_0130523 3300049569 Bacteria 1658
214 Ga0501033_0000590 3300049570 Bacteria 33630
215 Ga0501033_0111783 3300049570 Bacteria 1988
216 Ga0501037_0114845 3300049573 Bacteria 1938
217 Ga0501041_0008219 3300049577 Bacteria 6140
218 Ga0501042_0004068 3300049578 Bacteria 9279
219 Ga0501042_0006003 3300049578 Bacteria 7864
220 Ga0501046_0023792 3300049580 Bacteria 5034
221 Ga0501047_0008454 3300049581 Bacteria 9713
222 Ga0501047_0017971 3300049581 Bacteria 6778
223 Ga0501071_0068191 3300049587 Bacteria 2588
224 Ga0501075_0068706 3300049591 Bacteria 2677
225 Ga0501076_0125086 3300049592 Bacteria 2083
226 Ga0501080_0247793 3300049742 Bacteria 1625
227 Ga0501083_0053693 3300049744 Bacteria 2705
228 Ga0501035_0003509 3300049822 Bacteria 14988
229 Ga0501044_0000064 3300049823 Bacteria 130543
230 Ga0501044_0010161 3300049823 Bacteria 10228
231 nmdc:mga0yw44_23004_c1 3300050492 Bacteria 3505
232 nmdc:mga0k408_47489_c1 3300050493 Bacteria 2481
233 nmdc:mga06z11_75546_c1 3300050494 Bacteria 1794
234 nmdc:mga04h51_5009_c1 3300050495 Bacteria 3345
235 nmdc:mga07m45_4572_c1 3300050496 Bacteria 6779
236 nmdc:mga05p37_1032_c1 3300050507 Bacteria 31765
237 nmdc:mga06r32_59724_c1 3300050510 Bacteria 3668
238 nmdc:mga08y16_14075_c1 3300050511 Bacteria 8421
239 nmdc:mga08y16_266771_c1 3300050511 Unclassified 1768
240 nmdc:mga08y16_55240_c1 3300050511 Bacteria 4150
241 nmdc:mga0rr50_197065_c1 3300050513 Bacteria 1654
242 nmdc:mga08x19_15451_c1 3300050514 Bacteria 4646
243 Ga0495601_0012565 3300053077 Bacteria 5077
244 Ga0495619_0015374 3300053085 Bacteria 4842
245 Ga0500650_0020751 3300053098 Bacteria 2888
246 Ga0500559_0003581 3300053136 Bacteria 7596
247 Ga0500577_0025278 3300053142 Bacteria 2007
248 Ga0500616_0000031 3300053153 Bacteria 415013
249 Ga0501084_0006764 3300054114 Bacteria 9425

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050494 nmdc:mga06z11_75546_c1 nmdc:mga06z11_75546_c1_17_1039 297
2 3300035695 Ga0373927_0092882 Ga0373927_0092882_134_1291 311
3 3300036401 Ga0373937_0010619 Ga0373937_0010619_4286_5443 311
4 3300046454 Ga0495592_0041512 Ga0495592_0041512_1834_2991 311
5 3300046462 Ga0495651_0063434 Ga0495651_0063434_153_1310 311
6 3300046463 Ga0495653_0151040 Ga0495653_0151040_357_1514 311
7 3300046533 Ga0495640_0159723 Ga0495640_0159723_162_1349 311
8 3300047322 Ga0495680_0105695 Ga0495680_0105695_318_1475 311
9 3300047471 Ga0495684_0146235 Ga0495684_0146235_348_1505 311
10 3300048909 Ga0496106_0149262 Ga0496106_0149262_341_1453 313
11 3300031548 Ga0307408_100433377 Ga0307408_1004333771 326
12 3300013104 Ga0157370_10034821 Ga0157370_100348213 329
13 3300039437 Ga0436365_1835153 Ga0436365_1835153_442_1611 329
14 3300005530 Ga0070679_100157379 Ga0070679_1001573792 332
15 3300039438 Ga0436360_0390083 Ga0436360_0390083_955_2079 332
16 3300048905 Ga0496102_0003234 Ga0496102_0003234_9030_10148 332
17 3300048917 Ga0496114_0012748 Ga0496114_0012748_5054_6172 332
18 3300036401 Ga0373937_0037320 Ga0373937_0037320_1672_2802 333
19 3300046516 Ga0495628_0076427 Ga0495628_0076427_538_1695 334
20 3300005467 Ga0070706_100009764 Ga0070706_1000097642 337
21 3300005937 Ga0081455_10161541 Ga0081455_101615412 337
22 3300025910 Ga0207684_10004407 Ga0207684_1000440714 337
23 3300005458 Ga0070681_10117281 Ga0070681_101172812 338
24 3300006178 Ga0075367_10012017 Ga0075367_100120173 338
25 3300006353 Ga0075370_10001888 Ga0075370_100018884 338
26 3300025912 Ga0207707_10125367 Ga0207707_101253672 338
27 3300050496 nmdc:mga07m45_4572_c1 nmdc:mga07m45_4572_c1_3979_5094 338
28 3300048907 Ga0496104_0055835 Ga0496104_0055835_2527_3684 342
29 3300048908 Ga0496105_0040153 Ga0496105_0040153_2541_3698 342
30 3300004799 Ga0058863_10045605 Ga0058863_100456051 343
31 3300039447 Ga0436361_0404750 Ga0436361_0404750_446_1570 343
32 3300005548 Ga0070665_100029545 Ga0070665_1000295454 347
33 3300005563 Ga0068855_100018328 Ga0068855_1000183284 347
34 3300025949 Ga0207667_10016334 Ga0207667_100163344 347
35 3300028379 Ga0268266_10028049 Ga0268266_100280494 347
36 3300021320 Ga0214544_1000006 Ga0214544_100000629 348
37 3300021321 Ga0214542_1000002 Ga0214542_1000002347 348
38 3300021324 Ga0214545_1000002 Ga0214545_1000002372 348
39 3300021327 Ga0214543_1000385 Ga0214543_100038531 348
40 3300003316 rootH1_10109870 rootH1_101098702 349
41 3300003322 rootL2_10057350 rootL2_100573503 349
42 3300028563 Ga0265319_1000759 Ga0265319_10007597 349
43 3300031240 Ga0265320_10006394 Ga0265320_100063947 349
44 3300031616 Ga0307508_10000014 Ga0307508_100000142 349
45 3300049581 Ga0501047_0008454 Ga0501047_0008454_7390_8502 349
46 3300049744 Ga0501083_0053693 Ga0501083_0053693_364_1476 349
47 3300049823 Ga0501044_0000064 Ga0501044_0000064_3782_4894 349
48 3300053153 Ga0500616_0000031 Ga0500616_0000031_306095_307186 349
49 3300003320 rootH2_10033390 rootH2_100333909 350
50 3300006195 Ga0075366_10072380 Ga0075366_100723802 350
51 3300006942 Ga0099824_1017472 Ga0099824_10174724 350
52 3300027296 Ga0209389_1000176 Ga0209389_100017627 350
53 3300027357 Ga0209589_1000410 Ga0209589_100041036 350
54 3300027361 Ga0209489_100748 Ga0209489_10074817 350
55 3300047444 Ga0495675_0064132 Ga0495675_0064132_1060_2172 350
56 3300050493 nmdc:mga0k408_47489_c1 nmdc:mga0k408_47489_c1_514_1719 350
57 3300005467 Ga0070706_100001468 Ga0070706_10000146815 351
58 3300005937 Ga0081455_10075903 Ga0081455_100759033 351
59 3300006847 Ga0075431_100048246 Ga0075431_1000482463 351
60 3300009147 Ga0114129_10007501 Ga0114129_1000750111 351
61 3300025910 Ga0207684_10009100 Ga0207684_100091005 351
62 3300025939 Ga0207665_10034742 Ga0207665_100347421 351
63 3300045976 Ga0466967_0171496 Ga0466967_0171496_662_1804 351
64 3300050507 nmdc:mga05p37_1032_c1 nmdc:mga05p37_1032_c1_10942_12012 351
65 3300050510 nmdc:mga06r32_59724_c1 nmdc:mga06r32_59724_c1_2312_3382 351
66 3300042157 Ga0439458_0010748 Ga0439458_0010748_566_1672 352
67 3300021388 Ga0213875_10005915 Ga0213875_100059152 353
68 3300037853 Ga0436364_0199539 Ga0436364_0199539_1176_2297 353
69 3300039437 Ga0436365_0248557 Ga0436365_0248557_27349_28470 353
70 3300005614 Ga0068856_100013215 Ga0068856_1000132152 354
71 3300005841 Ga0068863_100352608 Ga0068863_1003526082 354
72 3300026078 Ga0207702_10021985 Ga0207702_100219853 354
73 3300026088 Ga0207641_10165090 Ga0207641_101650902 354
74 3300048905 Ga0496102_0000330 Ga0496102_0000330_45021_46142 354
75 3300048906 Ga0496103_0097798 Ga0496103_0097798_363_1484 354
76 3300009094 Ga0111539_10124229 Ga0111539_101242292 355
77 3300009147 Ga0114129_10143895 Ga0114129_101438952 355
78 3300039447 Ga0436361_0995512 Ga0436361_0995512_1302_2435 355
79 3300050511 nmdc:mga08y16_266771_c1 nmdc:mga08y16_266771_c1_130_1245 355
80 3300021388 Ga0213875_10000602 Ga0213875_1000060220 357
81 3300037853 Ga0436364_0112641 Ga0436364_0112641_4239_5354 357
82 3300044658 Ga0466972_0067583 Ga0466972_0067583_130_1308 357
83 iso_pu_bacteria 2643221601 2644017355 357
84 iso_pu_bacteria 2643221631 2644173684 357
85 3300005328 Ga0070676_10014295 Ga0070676_100142952 358
86 3300005341 Ga0070691_10037227 Ga0070691_100372272 358
87 3300005353 Ga0070669_100086491 Ga0070669_1000864912 358
88 3300005438 Ga0070701_10005795 Ga0070701_100057954 358
89 3300005441 Ga0070700_100003849 Ga0070700_1000038492 358
90 3300005444 Ga0070694_100011033 Ga0070694_1000110335 358
91 3300005459 Ga0068867_100011394 Ga0068867_1000113947 358
92 3300005545 Ga0070695_100189851 Ga0070695_1001898511 358
93 3300005546 Ga0070696_100099178 Ga0070696_1000991782 358
94 3300005563 Ga0068855_100031048 Ga0068855_1000310485 358
95 3300005578 Ga0068854_100073195 Ga0068854_1000731953 358
96 3300005615 Ga0070702_100001190 Ga0070702_1000011906 358
97 3300005719 Ga0068861_100077013 Ga0068861_1000770133 358
98 3300005983 Ga0081540_1021455 Ga0081540_10214553 358
99 3300025297 Ga0209758_1003139 Ga0209758_10031399 358
100 3300025907 Ga0207645_10046595 Ga0207645_100465952 358
101 3300025923 Ga0207681_10134516 Ga0207681_101345162 358
102 3300025981 Ga0207640_10206672 Ga0207640_102066722 358
103 3300026075 Ga0207708_10000915 Ga0207708_100009154 358
104 3300026089 Ga0207648_10003983 Ga0207648_100039832 358
105 3300026118 Ga0207675_100023003 Ga0207675_1000230033 358
106 3300037466 Ga0395898_0035887 Ga0395898_0035887_3522_4613 358
107 3300048929 Ga0496126_0105417 Ga0496126_0105417_870_1979 358
108 iso_pu_bacteria 2874590934 2874592782 359
109 iso_pu_bacteria 2876771140 2876772994 359
110 iso_pu_bacteria 2876818435 2876820321 359
111 iso_pu_bacteria 2879074833 2879076488 359
112 iso_pu_bacteria 2935648319 2935655237 359
113 iso_pu_bacteria 2935656913 2935664117 359
114 iso_pu_bacteria 2936011229 2936018231 359
115 iso_pu_bacteria 2936019824 2936021943 359
116 iso_pu_bacteria 2936028420 2936035586 359
117 iso_pu_bacteria 2936046547 2936053707 359
118 iso_pu_bacteria 2936055302 2936062805 359
119 iso_pu_bacteria 8019659431 8019661751 359
120 3300003214 JGI25165J46597_1000013 JGI25165J46597_100001339 360
121 3300005331 Ga0070670_100303311 Ga0070670_1003033112 360
122 3300006237 Ga0097621_100003631 Ga0097621_1000036315 360
123 3300006358 Ga0068871_100040752 Ga0068871_1000407523 360
124 3300009174 Ga0105241_10044686 Ga0105241_100446863 360
125 3300025261 Ga0209233_1000013 Ga0209233_1000013293 360
126 3300025911 Ga0207654_10045433 Ga0207654_100454332 360
127 3300046674 Ga0495588_0029406 Ga0495588_0029406_1550_2665 360
128 3300048929 Ga0496126_0123815 Ga0496126_0123815_138_1235 360
129 3300049570 Ga0501033_0000590 Ga0501033_0000590_8125_9249 360
130 3300049573 Ga0501037_0114845 Ga0501037_0114845_180_1304 360
131 3300049581 Ga0501047_0017971 Ga0501047_0017971_920_2044 360
132 3300049823 Ga0501044_0010161 Ga0501044_0010161_3143_4267 360
133 iso_pu_bacteria 2508501042 2508692184 360
134 iso_pu_bacteria 2513237098 2513676882 360
135 iso_pu_bacteria 2513237102 2513702084 360
136 iso_pu_bacteria 2513237139 2513878970 360
137 iso_pu_bacteria 2513237161 2514009933 360
138 iso_pu_bacteria 2515154112 2515630299 360
139 iso_pu_bacteria 2524023210 2524463680 360
140 iso_pu_bacteria 2802429603 2805918172 360
141 iso_pu_bacteria 2824600985 2824601777 360
142 iso_pu_bacteria 2824609381 2824612909 360
143 iso_pu_bacteria 2824653114 2824653330 360
144 iso_pu_bacteria 2824671348 2824672170 360
145 iso_pu_bacteria 2824679649 2824680437 360
146 iso_pu_bacteria 2824687955 2824688769 360
147 iso_pu_bacteria 2824696289 2824697506 360
148 iso_pu_bacteria 2824773399 2824774375 360
149 iso_pu_bacteria 2838122688 2838123168 360
150 iso_pu_bacteria 2841941048 2841948259 360
151 iso_pu_bacteria 2841949485 2841954315 360
152 iso_pu_bacteria 2841966195 2841969687 360
153 iso_pu_bacteria 2841974524 2841978877 360
154 iso_pu_bacteria 2841983080 2841984007 360
155 iso_pu_bacteria 2842038055 2842038787 360
156 iso_pu_bacteria 2842045827 2842048268 360
157 iso_pu_bacteria 2847939898 2847947204 360
158 iso_pu_bacteria 2874604998 2874609248 360
159 iso_pu_bacteria 2874612657 2874616555 360
160 iso_pu_bacteria 2874620515 2874622699 360
161 iso_pu_bacteria 2874645413 2874652382 360
162 iso_pu_bacteria 2888419890 2888422378 360
163 iso_pu_bacteria 2903768456 2903770531 360
164 iso_pu_bacteria 2904666416 2904667113 360
165 iso_pu_bacteria 2922393267 2922397662 360
166 iso_pu_bacteria 2935769743 2935770771 360
167 iso_pu_bacteria 2935777560 2935780440 360
168 iso_pu_bacteria 2935785616 2935786943 360
169 iso_pu_bacteria 2935793552 2935794991 360
170 iso_pu_bacteria 2935975950 2935983268 360
171 iso_pu_bacteria 3005483717 3005489933 360
172 iso_pu_bacteria 8006994254 8006997240 360
173 iso_pu_bacteria 8016630954 8016639707 360
174 iso_pu_bacteria 8019538911 8019542732 360
175 iso_pu_bacteria 8019678201 8019684899 360
176 iso_pu_bacteria 8056673599 8056678005 360
177 3300005330 Ga0070690_100068364 Ga0070690_1000683642 361
178 3300005458 Ga0070681_10062292 Ga0070681_100622923 361
179 3300005471 Ga0070698_100075214 Ga0070698_1000752142 361
180 3300021388 Ga0213875_10001470 Ga0213875_100014703 361
181 3300025912 Ga0207707_10087482 Ga0207707_100874822 361
182 3300031548 Ga0307408_100022441 Ga0307408_1000224414 361
183 3300031852 Ga0307410_10022988 Ga0307410_100229884 361
184 3300031901 Ga0307406_10010184 Ga0307406_100101842 361
185 3300031911 Ga0307412_10001701 Ga0307412_100017013 361
186 3300031995 Ga0307409_100000641 Ga0307409_1000006416 361
187 3300032002 Ga0307416_100035188 Ga0307416_1000351883 361
188 3300032126 Ga0307415_100005192 Ga0307415_1000051925 361
189 3300037853 Ga0436364_0564409 Ga0436364_0564409_12363_13487 361
190 3300037853 Ga0436364_1024535 Ga0436364_1024535_1655_2794 361
191 3300039437 Ga0436365_1436446 Ga0436365_1436446_1141_2262 361
192 3300039437 Ga0436365_1450461 Ga0436365_1450461_58_1182 361
193 3300046454 Ga0495592_0059314 Ga0495592_0059314_410_1546 361
194 3300046533 Ga0495640_0022076 Ga0495640_0022076_3372_4508 361
195 3300046535 Ga0495586_0065238 Ga0495586_0065238_240_1376 361
196 3300046559 Ga0495667_0004553 Ga0495667_0004553_380_1516 361
197 3300046642 Ga0495634_0046062 Ga0495634_0046062_439_1575 361
198 3300046679 Ga0495623_0009663 Ga0495623_0009663_3679_4782 361
199 3300047322 Ga0495680_0066952 Ga0495680_0066952_1579_2715 361
200 3300047444 Ga0495675_0180262 Ga0495675_0180262_161_1264 361
201 3300053077 Ga0495601_0012565 Ga0495601_0012565_691_1827 361
202 3300053085 Ga0495619_0015374 Ga0495619_0015374_523_1659 361
203 3300053098 Ga0500650_0020751 Ga0500650_0020751_680_1807 361
204 3300053142 Ga0500577_0025278 Ga0500577_0025278_210_1337 361
205 iso_pu_bacteria 2842775625 2842779363 361
206 iso_pu_bacteria 2939657138 2939660656 361
207 iso_pu_bacteria 2946059875 2946060694 361
208 3300005985 Ga0081539_10002985 Ga0081539_100029859 362
209 iso_pu_bacteria 2893066018 2893071597 362
210 3300005364 Ga0070673_100050354 Ga0070673_1000503542 363
211 3300005434 Ga0070709_10000151 Ga0070709_1000015127 363
212 3300005435 Ga0070714_100001928 Ga0070714_10000192813 363
213 3300005437 Ga0070710_10000079 Ga0070710_100000792 363
214 3300005439 Ga0070711_100001948 Ga0070711_1000019485 363
215 3300005467 Ga0070706_100026021 Ga0070706_1000260214 363
216 3300005471 Ga0070698_100030935 Ga0070698_1000309354 363
217 3300005518 Ga0070699_100240866 Ga0070699_1002408662 363
218 3300005543 Ga0070672_100053532 Ga0070672_1000535322 363
219 3300006175 Ga0070712_100008831 Ga0070712_1000088312 363
220 3300006844 Ga0075428_100331523 Ga0075428_1003315232 363
221 3300006852 Ga0075433_10071149 Ga0075433_100711492 363
222 3300009094 Ga0111539_10006463 Ga0111539_100064635 363
223 3300025898 Ga0207692_10000120 Ga0207692_1000012018 363
224 3300025906 Ga0207699_10000407 Ga0207699_1000040716 363
225 3300025915 Ga0207693_10067108 Ga0207693_100671082 363
226 3300025916 Ga0207663_10004786 Ga0207663_100047864 363
227 3300025929 Ga0207664_10003017 Ga0207664_100030176 363
228 3300025939 Ga0207665_10000442 Ga0207665_100004429 363
229 3300027907 Ga0207428_10034032 Ga0207428_100340324 363
230 3300031548 Ga0307408_100322064 Ga0307408_1003220641 363
231 3300037312 Ga0395899_0001011 Ga0395899_0001011_6595_7707 363
232 3300044673 Ga0453683_0009013 Ga0453683_0009013_1890_2987 363
233 3300045051 Ga0451576_0000203 Ga0451576_0000203_6435_7532 363
234 3300050492 nmdc:mga0yw44_23004_c1 nmdc:mga0yw44_23004_c1_424_1536 363
235 3300050511 nmdc:mga08y16_14075_c1 nmdc:mga08y16_14075_c1_5151_6254 363
236 3300003203 JGI25406J46586_10002510 JGI25406J46586_100025102 364
237 3300005327 Ga0070658_10128895 Ga0070658_101288952 364
238 3300005329 Ga0070683_100031365 Ga0070683_1000313652 364
239 3300005329 Ga0070683_100304404 Ga0070683_1003044042 364
240 3300005338 Ga0068868_100015496 Ga0068868_1000154963 364
241 3300005434 Ga0070709_10002409 Ga0070709_100024098 364
242 3300005458 Ga0070681_10094992 Ga0070681_100949922 364
243 3300005468 Ga0070707_100228313 Ga0070707_1002283132 364
244 3300005471 Ga0070698_100032197 Ga0070698_1000321972 364
245 3300005471 Ga0070698_100103197 Ga0070698_1001031972 364
246 3300005983 Ga0081540_1027965 Ga0081540_10279652 364
247 3300005985 Ga0081539_10000116 Ga0081539_10000116172 364
248 3300005985 Ga0081539_10072706 Ga0081539_100727062 364
249 3300006042 Ga0075368_10012117 Ga0075368_100121172 364
250 3300006173 Ga0070716_100127060 Ga0070716_1001270602 364
251 3300006852 Ga0075433_10005172 Ga0075433_1000517210 364
252 3300006852 Ga0075433_10077143 Ga0075433_100771432 364
253 3300006871 Ga0075434_100049809 Ga0075434_1000498092 364
254 3300006914 Ga0075436_100008823 Ga0075436_1000088235 364
255 3300007076 Ga0075435_100046468 Ga0075435_1000464682 364
256 3300009093 Ga0105240_10060088 Ga0105240_100600883 364
257 3300009094 Ga0111539_10015233 Ga0111539_100152335 364
258 3300013105 Ga0157369_10013077 Ga0157369_100130775 364
259 3300021384 Ga0213876_10061286 Ga0213876_100612862 364
260 3300025261 Ga0209233_1000952 Ga0209233_100095210 364
261 3300025912 Ga0207707_10017168 Ga0207707_100171683 364
262 3300025912 Ga0207707_10130598 Ga0207707_101305982 364
263 3300025913 Ga0207695_10116511 Ga0207695_101165112 364
264 3300025913 Ga0207695_10207813 Ga0207695_102078132 364
265 3300025922 Ga0207646_10108040 Ga0207646_101080402 364
266 3300025944 Ga0207661_10000243 Ga0207661_1000024312 364
267 3300025944 Ga0207661_10021484 Ga0207661_100214842 364
268 3300026023 Ga0207677_10004999 Ga0207677_100049992 364
269 3300026095 Ga0207676_10062100 Ga0207676_100621002 364
270 3300031249 Ga0265339_10004640 Ga0265339_100046409 364
271 3300031344 Ga0265316_10162657 Ga0265316_101626571 364
272 3300031456 Ga0307513_10082658 Ga0307513_100826583 364
273 3300031731 Ga0307405_10010459 Ga0307405_100104592 364
274 3300031731 Ga0307405_10238524 Ga0307405_102385241 364
275 3300031911 Ga0307412_10111921 Ga0307412_101119212 364
276 3300031995 Ga0307409_100027711 Ga0307409_1000277112 364
277 3300032002 Ga0307416_100165052 Ga0307416_1001650522 364
278 3300032004 Ga0307414_10279403 Ga0307414_102794031 364
279 3300037068 Ga0373925_0000605 Ga0373925_0000605_18310_19419 364
280 3300037068 Ga0373925_0007503 Ga0373925_0007503_6147_7247 364
281 3300037312 Ga0395899_0081339 Ga0395899_0081339_1005_2123 364
282 3300037466 Ga0395898_0012498 Ga0395898_0012498_4345_5463 364
283 3300038443 Ga0395901_0150406 Ga0395901_0150406_1161_2279 364
284 3300039437 Ga0436365_1934552 Ga0436365_1934552_3616_4746 364
285 3300042002 Ga0439442_000018 Ga0439442_000018_7461_8627 364
286 3300045051 Ga0451576_0127724 Ga0451576_0127724_501_1601 364
287 3300045976 Ga0466967_0000349 Ga0466967_0000349_9194_10312 364
288 3300045976 Ga0466967_0294958 Ga0466967_0294958_14_1120 364
289 3300046459 Ga0495629_0028950 Ga0495629_0028950_977_2119 364
290 3300046461 Ga0495641_0046929 Ga0495641_0046929_348_1466 364
291 3300046463 Ga0495653_0070076 Ga0495653_0070076_1460_2578 364
292 3300048905 Ga0496102_0043136 Ga0496102_0043136_81_1199 364
293 3300048915 Ga0496112_0250043 Ga0496112_0250043_251_1363 364
294 3300048917 Ga0496114_0013783 Ga0496114_0013783_1064_2182 364
295 3300049569 Ga0501032_0130523 Ga0501032_0130523_311_1435 364
296 3300049570 Ga0501033_0111783 Ga0501033_0111783_653_1777 364
297 3300049577 Ga0501041_0008219 Ga0501041_0008219_1712_2836 364
298 3300049578 Ga0501042_0004068 Ga0501042_0004068_2973_4097 364
299 3300049578 Ga0501042_0006003 Ga0501042_0006003_5045_6178 364
300 3300049580 Ga0501046_0023792 Ga0501046_0023792_341_1465 364
301 3300049587 Ga0501071_0068191 Ga0501071_0068191_990_2114 364
302 3300049591 Ga0501075_0068706 Ga0501075_0068706_969_2093 364
303 3300049592 Ga0501076_0125086 Ga0501076_0125086_593_1717 364
304 3300049742 Ga0501080_0247793 Ga0501080_0247793_313_1419 364
305 3300049822 Ga0501035_0003509 Ga0501035_0003509_13524_14648 364
306 3300050495 nmdc:mga04h51_5009_c1 nmdc:mga04h51_5009_c1_168_1289 364
307 3300050511 nmdc:mga08y16_55240_c1 nmdc:mga08y16_55240_c1_769_1914 364
308 3300050513 nmdc:mga0rr50_197065_c1 nmdc:mga0rr50_197065_c1_543_1640 364
309 3300050514 nmdc:mga08x19_15451_c1 nmdc:mga08x19_15451_c1_3111_4208 364
310 3300053136 Ga0500559_0003581 Ga0500559_0003581_4957_6072 364
311 3300054114 Ga0501084_0006764 Ga0501084_0006764_5147_6271 364
312 iso_pu_bacteria 2617270735 2617346236 364
313 iso_pu_bacteria 2808606365 2808875545 364
314 iso_pu_bacteria 2919446982 2919447966 364

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

17

391

0.97

PF00155

Aminotran_1_2

Aminotransferase class I and II

14

328

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2oga-assembly1.cif.gz_A x-ray crystal structure of s. venezuelae desv in complex with ketimine intermediate 0.9804 2 361
3frk-assembly1.cif.gz_B x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine 0.9797 2 361
3nys-assembly1.cif.gz_A x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas aeruginosa in complex with plp at 1.45 angstrom resolution 0.9746 1 360
3nu7-assembly1.cif.gz_A wbpe, an aminotransferase from pseudomonas aeruginosa involved in o-antigen assembly in complex with the cofactor pmp 0.9728 2 359
3nys-assembly1.cif.gz_A x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas aeruginosa in complex with plp at 1.45 angstrom resolution 0.9693 1 360
ID Description Score Start End Superfamily
2ogeD01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9647 1 242 3.40.640.10
2ogaB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9632 245 361 3.90.1150.10
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9604 6 242 3.40.640.10
1b9iA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9596 16 240 3.40.640.10
3frkB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9544 245 361 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7X7J125-F1-model_v4 Erythromycin biosynthesis sensory transduction protein eryC1 0.9906 175 359 GO:0000271
GO:0008483
GO:0030170
AF-A0A3C0EKZ3-F1-model_v4 Transcriptional regulator 0.9874 2 363 GO:0000271
GO:0008483
GO:0030170
AF-A0A661BCK4-F1-model_v4 Erythromycin biosynthesis sensory transduction protein eryC1 0.9864 2 363 GO:0000271
GO:0008483
GO:0030170
AF-A0A7X7YJA1-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9862 1 359 GO:0000271
GO:0008483
GO:0030170
AF-A0A7W1L4E0-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9857 186 364 GO:0000271
GO:0008483
GO:0030170

Feature Viewer

pLDDT pTM Quality
96.9 0.94 High
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Predicted Structure (AlphaFold2)

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