F402279

General Info

Members Datasets Scaffolds Average Seq Length
313 201 626 172

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0119479|Ga0395900_0119479_231_779
Length 171
Sequence MSDETAVHGAEESETAAEGRVDTGPERGEATDAELDAQGDAAADYIEALLDICDLDGDIDIDVQNGRPYVSVSADDPMALRLLSRAETVSAKTGSFSRLILDIGGSREARKQELAALVDRAIERLEQGATQAALPPMSSYERKIVHDVVAERGFSSHSVGEASERHTVITR

Samples

Sample ID Description Type Environment
1 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
5 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
6 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
29 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
89 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
90 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
91 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
92 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
96 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
118 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
119 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
120 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
123 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
153 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
156 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
160 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
161 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
164 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
165 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
166 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
167 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
171 2643221566 Microbacterium sp. Root166 Isolate Unclassified
172 2643221572 Leifsonia sp. Root60 Isolate Unclassified
173 2643221575 Microbacterium sp. Root61 Isolate Unclassified
174 2643221597 Microbacterium sp. Root180 Isolate Unclassified
175 2643221616 Leifsonia sp. Root227 Isolate Unclassified
176 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
177 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
178 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
179 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
180 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
181 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
182 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
183 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
184 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
185 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
186 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
187 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
188 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
189 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
190 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
191 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
192 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
193 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
194 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
195 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
196 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
197 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
198 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
199 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
200 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
201 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.78
Metatranscriptomes 0
Isolates 10.22

Biome Distribution

Category Percentage (%)
Aerial Root 0.32
Bulb 0
Endosphere 14.7
Nodule 0
Rhizoplane 13.42
Rhizosphere 53.35
Stem 0
Stem Tuber 0.32
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395900_0119479 3300037418 Bacteria 2705
2 JGI25164J39214_1000299 3300002772 Bacteria 33711
3 JGI25165J46597_1000005 3300003214 Bacteria 623702
4 Ga0055527_1000004 3300003760 Bacteria 570634
5 Ga0055542_1000019 3300003762 Bacteria 341174
6 Ga0055529_1000008 3300003763 Bacteria 394786
7 Ga0065714_10116316 3300005288 Bacteria 1404
8 Ga0065714_10121054 3300005288 Bacteria 1348
9 Ga0068868_100191959 3300005338 Bacteria 1699
10 Ga0070668_100046516 3300005347 Bacteria 3332
11 Ga0070669_100334727 3300005353 Bacteria 1225
12 Ga0070675_100133052 3300005354 Bacteria 2121
13 Ga0070710_10004155 3300005437 Bacteria 6874
14 Ga0068867_101803295 3300005459 Bacteria 575
15 Ga0070685_10161853 3300005466 Bacteria 1427
16 Ga0068853_100086224 3300005539 Bacteria 2753
17 Ga0068855_100080490 3300005563 Bacteria 3777
18 Ga0068857_101294679 3300005577 Bacteria 707
19 Ga0070702_100200339 3300005615 Bacteria 1321
20 Ga0068852_100377397 3300005616 Bacteria 1390
21 Ga0068864_101899383 3300005618 Bacteria 601
22 Ga0068870_10099116 3300005840 Bacteria 1643
23 Ga0068862_100211120 3300005844 Bacteria 1754
24 Ga0075368_10014070 3300006042 Bacteria 2949
25 Ga0075363_100043553 3300006048 Bacteria 2375
26 Ga0075364_10010472 3300006051 Bacteria 5602
27 Ga0075364_10084795 3300006051 Bacteria 2097
28 Ga0075367_10014344 3300006178 Bacteria 4289
29 Ga0075369_10007497 3300006186 Bacteria 4157
30 Ga0075370_10017074 3300006353 Bacteria 3917
31 Ga0105244_10014385 3300009036 Bacteria 4578
32 Ga0105243_10038841 3300009148 Bacteria 3709
33 Ga0105243_10065029 3300009148 Bacteria 2928
34 Ga0105243_10093946 3300009148 Bacteria 2476
35 Ga0105243_10107263 3300009148 Bacteria 2329
36 Ga0105237_10066813 3300009545 Bacteria 3590
37 Ga0105238_10579440 3300009551 Bacteria 1128
38 Ga0105249_10276907 3300009553 Bacteria 1674
39 Ga0105249_11464911 3300009553 Bacteria 755
40 Ga0105246_10188739 3300011119 Bacteria 1593
41 Ga0157371_10214771 3300013102 Bacteria 1381
42 Ga0157370_10039684 3300013104 Bacteria 4549
43 Ga0157370_10041921 3300013104 Bacteria 4413
44 Ga0157369_10031886 3300013105 Bacteria 5799
45 Ga0157369_10211404 3300013105 Bacteria 2033
46 Ga0157369_10348520 3300013105 Bacteria 1538
47 Ga0157369_10528224 3300013105 Bacteria 1220
48 Ga0157369_10682622 3300013105 Bacteria 1058
49 Ga0163162_10047917 3300013306 Bacteria 4282
50 Ga0163162_12738042 3300013306 Bacteria 568
51 Ga0157372_10119166 3300013307 Bacteria 3029
52 Ga0157375_10188942 3300013308 Bacteria 2214
53 Ga0157375_10983637 3300013308 Bacteria 984
54 Ga0163163_10248548 3300014325 Bacteria 1829
55 Ga0163163_11782964 3300014325 Bacteria 676
56 Ga0157380_10018776 3300014326 Bacteria 5141
57 Ga0157380_10089649 3300014326 Bacteria 2534
58 Ga0157377_10110283 3300014745 Bacteria 1653
59 Ga0163161_10631549 3300017792 Bacteria 886
60 Ga0209672_100011 3300025228 Bacteria 856297
61 Ga0209147_100289 3300025229 Bacteria 42738
62 Ga0207427_100024 3300025231 Bacteria 438403
63 Ga0209437_100243 3300025233 Bacteria 88712
64 Ga0209258_106523 3300025242 Bacteria 1820
65 Ga0209646_1000030 3300025246 Bacteria 384216
66 Ga0209148_1000023 3300025254 Bacteria 680511
67 Ga0209233_1000001 3300025261 Bacteria 2992747
68 Ga0209455_1000023 3300025272 Bacteria 680449
69 Ga0207655_1011806 3300025728 Bacteria 5163
70 Ga0207655_1012298 3300025728 Bacteria 5016
71 Ga0207692_10026073 3300025898 Bacteria 2739
72 Ga0207647_10002880 3300025904 Bacteria 12964
73 Ga0207643_10026094 3300025908 Bacteria 3233
74 Ga0207705_10000001 3300025909 Bacteria 2061880
75 Ga0207705_10149298 3300025909 Bacteria 1750
76 Ga0207654_10437714 3300025911 Bacteria 915
77 Ga0207671_10115330 3300025914 Bacteria 2048
78 Ga0207657_10087664 3300025919 Bacteria 2603
79 Ga0207657_10142311 3300025919 Bacteria 1959
80 Ga0207659_10109755 3300025926 Bacteria 2095
81 Ga0207664_10301843 3300025929 Bacteria 1409
82 Ga0207709_10005131 3300025935 Bacteria 7474
83 Ga0207709_10009357 3300025935 Bacteria 5391
84 Ga0207709_10051072 3300025935 Bacteria 2532
85 Ga0207709_10114554 3300025935 Bacteria 1809
86 Ga0207691_10213184 3300025940 Bacteria 1677
87 Ga0207667_10044387 3300025949 Bacteria 4710
88 Ga0207651_11161026 3300025960 Bacteria 693
89 Ga0207668_10015393 3300025972 Bacteria 4752
90 Ga0207668_11386716 3300025972 Bacteria 633
91 Ga0207639_10264425 3300026041 Bacteria 1506
92 Ga0207675_100184414 3300026118 Bacteria 2000
93 Ga0207683_10084072 3300026121 Bacteria 2829
94 Ga0207698_10435520 3300026142 Bacteria 1262
95 Ga0209813_10292363 3300027866 Bacteria 631
96 Ga0268265_10299571 3300028380 Bacteria 1447
97 Ga0307513_10222337 3300031456 Bacteria 1708
98 Ga0307513_10226516 3300031456 Bacteria 1686
99 Ga0307408_100706457 3300031548 Bacteria 907
100 Ga0307514_10003701 3300031649 Bacteria 14456
101 Ga0307405_10389282 3300031731 Bacteria 1088
102 Ga0307413_10211278 3300031824 Bacteria 1410
103 Ga0307413_10309523 3300031824 Bacteria 1202
104 Ga0307413_11311436 3300031824 Bacteria 634
105 Ga0307410_10435090 3300031852 Bacteria 1067
106 Ga0307406_10112244 3300031901 Bacteria 1879
107 Ga0307406_10226986 3300031901 Bacteria 1392
108 Ga0307412_10654126 3300031911 Bacteria 897
109 Ga0307409_100467336 3300031995 Bacteria 1221
110 Ga0307409_102137359 3300031995 Bacteria 589
111 Ga0307416_100151611 3300032002 Bacteria 2127
112 Ga0307416_101224418 3300032002 Bacteria 856
113 Ga0307414_11170873 3300032004 Bacteria 711
114 Ga0395898_0000355 3300037466 Bacteria 101003
115 Ga0395901_0040073 3300038443 Bacteria 4850
116 Ga0439465_0191484 3300041413 Bacteria 743
117 Ga0439465_0241449 3300041413 Bacteria 666
118 Ga0451791_0926347 3300041451 Bacteria 717
119 Ga0451791_1946376 3300041451 Bacteria 794
120 Ga0451793_0243196 3300041452 Bacteria 5629
121 Ga0451793_0974447 3300041452 Bacteria 3316
122 Ga0451797_0956420 3300041453 Bacteria 925
123 Ga0451797_1453235 3300041453 Bacteria 1196
124 Ga0451853_0965383 3300041512 Bacteria 645
125 Ga0451853_3494075 3300041512 Bacteria 1233
126 Ga0451853_3544099 3300041512 Bacteria 1145
127 Ga0466972_0183785 3300044658 Bacteria 980
128 Ga0466965_0090834 3300044683 Bacteria 1553
129 Ga0466968_0314624 3300044735 Bacteria 755
130 Ga0495638_0098509 3300046460 Bacteria 1751
131 Ga0495650_0028203 3300046471 Bacteria 2582
132 Ga0495645_0234412 3300046543 Bacteria 1228
133 Ga0495656_0370526 3300046615 Bacteria 745
134 Ga0495625_0484656 3300046660 Bacteria 758
135 Ga0495613_0219492 3300046689 Bacteria 1335
136 Ga0496100_0029507 3300048903 Bacteria 3393
137 Ga0496101_0028497 3300048904 Bacteria 3898
138 Ga0496101_0060294 3300048904 Bacteria 2752
139 Ga0496102_0032109 3300048905 Bacteria 4716
140 Ga0496102_0039258 3300048905 Bacteria 4277
141 Ga0496102_0176414 3300048905 Bacteria 2012
142 Ga0496103_0069309 3300048906 Bacteria 2204
143 Ga0496103_0130164 3300048906 Bacteria 1607
144 Ga0496104_0013018 3300048907 Bacteria 7491
145 Ga0496104_0069407 3300048907 Bacteria 3350
146 Ga0496104_0141709 3300048907 Bacteria 2309
147 Ga0496105_0011174 3300048908 Bacteria 7082
148 Ga0496105_0129988 3300048908 Bacteria 2076
149 Ga0496105_0136758 3300048908 Bacteria 2018
150 Ga0496105_0225762 3300048908 Bacteria 1523
151 Ga0496107_0039665 3300048910 Bacteria 3379
152 Ga0496108_0067865 3300048911 Bacteria 3008
153 Ga0496108_0417726 3300048911 Bacteria 1171
154 Ga0496109_0170220 3300048912 Bacteria 2043
155 Ga0496109_0728043 3300048912 Bacteria 930
156 Ga0496110_0059706 3300048913 Bacteria 3362
157 Ga0496111_0044780 3300048914 Bacteria 3181
158 Ga0496111_0382913 3300048914 Bacteria 1040
159 Ga0496112_0204567 3300048915 Bacteria 1933
160 Ga0496113_0019062 3300048916 Bacteria 4793
161 Ga0496113_0038671 3300048916 Bacteria 3508
162 Ga0496113_0135490 3300048916 Bacteria 1935
163 Ga0496114_0012750 3300048917 Bacteria 6732
164 Ga0496114_0015714 3300048917 Bacteria 6090
165 Ga0496114_0024054 3300048917 Bacteria 4971
166 Ga0496114_0157838 3300048917 Bacteria 1970
167 Ga0496114_0846363 3300048917 Bacteria 795
168 Ga0496115_0044609 3300048918 Bacteria 3537
169 Ga0496115_0102633 3300048918 Bacteria 2346
170 Ga0496115_0440569 3300048918 Bacteria 1053
171 Ga0496115_0685649 3300048918 Bacteria 807
172 Ga0496117_0000014 3300048920 Bacteria 584427
173 Ga0496117_0020489 3300048920 Bacteria 5388
174 Ga0496117_0077438 3300048920 Bacteria 2201
175 Ga0496117_0152599 3300048920 Bacteria 1365
176 Ga0496118_0088541 3300048921 Bacteria 2141
177 Ga0496118_0180089 3300048921 Bacteria 1278
178 Ga0496119_0001735 3300048922 Bacteria 25426
179 Ga0496119_0003039 3300048922 Bacteria 17763
180 Ga0496119_0020315 3300048922 Bacteria 4850
181 Ga0496119_0074046 3300048922 Bacteria 1984
182 Ga0496119_0310427 3300048922 Bacteria 775
183 Ga0496120_0000935 3300048923 Bacteria 40142
184 Ga0496120_0005804 3300048923 Bacteria 9675
185 Ga0496120_0140952 3300048923 Bacteria 1224
186 Ga0496120_0223029 3300048923 Bacteria 900
187 Ga0496120_0314306 3300048923 Bacteria 713
188 Ga0496121_0132081 3300048924 Bacteria 1867
189 Ga0496122_0015575 3300048925 Bacteria 7257
190 Ga0496122_0066004 3300048925 Bacteria 2618
191 Ga0496122_0073838 3300048925 Bacteria 2416
192 Ga0496123_0002281 3300048926 Bacteria 24132
193 Ga0496123_0009533 3300048926 Bacteria 8731
194 Ga0496123_0086670 3300048926 Bacteria 1877
195 Ga0496124_0003698 3300048927 Bacteria 18485
196 Ga0496124_0018540 3300048927 Bacteria 6515
197 Ga0496124_0418991 3300048927 Bacteria 923
198 Ga0496125_0001428 3300048928 Bacteria 34818
199 Ga0496125_0008031 3300048928 Bacteria 11141
200 Ga0496126_0002342 3300048929 Bacteria 25941
201 Ga0496126_0003983 3300048929 Bacteria 18044
202 Ga0496126_0439409 3300048929 Bacteria 1052
203 Ga0501031_0008875 3300049568 Bacteria 6535
204 Ga0501032_0029659 3300049569 Bacteria 3752
205 Ga0501032_0066834 3300049569 Bacteria 2402
206 Ga0501032_0405417 3300049569 Bacteria 875
207 Ga0501033_0041293 3300049570 Bacteria 3442
208 Ga0501033_0063662 3300049570 Bacteria 2714
209 Ga0501033_0269043 3300049570 Bacteria 1205
210 Ga0501034_0046735 3300049571 Bacteria 4373
211 Ga0501034_0228285 3300049571 Bacteria 1811
212 Ga0501034_0307564 3300049571 Bacteria 1520
213 Ga0501036_0020457 3300049572 Bacteria 5559
214 Ga0501036_0038460 3300049572 Bacteria 4049
215 Ga0501037_0102037 3300049573 Bacteria 2069
216 Ga0501037_0232221 3300049573 Bacteria 1295
217 Ga0501038_0001027 3300049574 Bacteria 25180
218 Ga0501038_0215422 3300049574 Bacteria 1534
219 Ga0501038_0438798 3300049574 Bacteria 1006
220 Ga0501038_0675650 3300049574 Bacteria 776
221 Ga0501039_0008445 3300049575 Bacteria 7849
222 Ga0501039_0023584 3300049575 Bacteria 4722
223 Ga0501042_0211358 3300049578 Bacteria 1399
224 Ga0501043_0066564 3300049579 Bacteria 2829
225 Ga0501043_0084785 3300049579 Bacteria 2490
226 Ga0501046_0015725 3300049580 Bacteria 6349
227 Ga0501046_0071189 3300049580 Bacteria 2702
228 Ga0501046_0648448 3300049580 Bacteria 746
229 Ga0501047_0058726 3300049581 Bacteria 3715
230 Ga0501047_0169904 3300049581 Bacteria 2049
231 Ga0501047_0536830 3300049581 Bacteria 994
232 Ga0501048_0014050 3300049582 Bacteria 5935
233 Ga0501048_0017843 3300049582 Bacteria 5222
234 Ga0501068_0063157 3300049584 Bacteria 2253
235 Ga0501069_0022578 3300049585 Bacteria 3425
236 Ga0501070_0000269 3300049586 Bacteria 49060
237 Ga0501070_0007555 3300049586 Bacteria 9238
238 Ga0501070_0079505 3300049586 Bacteria 2713
239 Ga0501071_0030189 3300049587 Bacteria 3832
240 Ga0501072_0394577 3300049588 Bacteria 1098
241 Ga0501073_0075647 3300049589 Bacteria 2344
242 Ga0501074_0172122 3300049590 Bacteria 1545
243 Ga0501080_0062372 3300049742 Bacteria 3469
244 Ga0501083_0076882 3300049744 Bacteria 2215
245 Ga0501035_0054745 3300049822 Bacteria 3563
246 Ga0501035_0083702 3300049822 Bacteria 2814
247 Ga0501035_0312643 3300049822 Bacteria 1321
248 Ga0501044_0015462 3300049823 Bacteria 8219
249 Ga0501044_0025663 3300049823 Bacteria 6247
250 Ga0501044_0199188 3300049823 Bacteria 1961
251 Ga0501044_0237934 3300049823 Bacteria 1765
252 Ga0501045_0029108 3300049824 Bacteria 3990
253 Ga0501045_0468243 3300049824 Bacteria 936
254 Ga0501212_065346 3300049851 Bacteria 636
255 nmdc:mga03n38_26590_c1 3300050490 Bacteria 2391
256 nmdc:mga00v17_31909_c1 3300050491 Bacteria 3110
257 nmdc:mga0yw44_14466_c1 3300050492 Bacteria 4192
258 nmdc:mga0yw44_9301_c1 3300050492 Bacteria 4957
259 nmdc:mga04h51_295864_c1 3300050495 Bacteria 659
260 nmdc:mga07m45_239114_c1 3300050496 Bacteria 1057
261 nmdc:mga0sz30_13104_c1 3300050516 Bacteria 3239
262 Ga0500643_000124 3300053087 Bacteria 79663
263 Ga0500650_0075287 3300053098 Bacteria 1578
264 Ga0500556_0000008 3300053104 Bacteria 304943
265 Ga0500559_0000173 3300053136 Bacteria 50992
266 Ga0500568_0000003 3300053139 Bacteria 863587
267 Ga0500568_0000099 3300053139 Bacteria 80197
268 Ga0500573_0004199 3300053140 Bacteria 7547
269 Ga0500573_0015477 3300053140 Bacteria 4325
270 Ga0500573_0061676 3300053140 Bacteria 2147
271 Ga0500573_0116562 3300053140 Bacteria 1490
272 Ga0500573_0120523 3300053140 Bacteria 1460
273 Ga0500573_0169906 3300053140 Bacteria 1180
274 Ga0500573_0306387 3300053140 Bacteria 791
275 Ga0500577_0003682 3300053142 Bacteria 3998
276 Ga0500577_0047307 3300053142 Bacteria 1599
277 Ga0500577_0102129 3300053142 Bacteria 1173
278 Ga0500604_0028324 3300053151 Bacteria 1626
279 Ga0500637_0479269 3300053178 Bacteria 623
280 Ga0501084_0466211 3300054114 Bacteria 1068
281 Ga0501082_0264073 3300060353 Bacteria 1498
282 2588107525 2585428157 Bacteria 3018951
283 2643847352 2643221566 Bacteria 3460379
284 2643877148 2643221572 Bacteria 3614809
285 2643887535 2643221575 Bacteria 4022601
286 2643997341 2643221597 Bacteria 3347721
287 2644097403 2643221616 Bacteria 4066575
288 2644181832 2643221632 Bacteria 3406696
289 2644384203 2643221669 Bacteria 3611286
290 2723644034 2721755702 Bacteria 4373124
291 2758225287 2757320536 Bacteria 3629334
292 2774397471 2773857763 Bacteria 4180068
293 2808629406 2808606306 Bacteria 3608896
294 2809225836 2808606447 Bacteria 3572005
295 2812325190 2811994872 Bacteria 4121241
296 2821271846 2821268502 Bacteria 3750023
297 2833712890 2833709550 Bacteria 4008291
298 2852635288 2852632344 Bacteria 3463163
299 2852644001 2852643534 Bacteria 3013378
300 2857722690 2857720070 Bacteria 3189373
301 2857735062 2857733635 Bacteria 3532004
302 2870628675 2870628048 Bacteria 3696012
303 2884767353 2884763398 Bacteria 4091164
304 2895662065 2895660088 Bacteria 3782833
305 2928093469 2928090899 Bacteria 3158267
306 2939660473 2939657138 Bacteria 3740283
307 2939661994 2939660829 Bacteria 3784848
308 2964327888 2964326757 Bacteria 3290868
309 2974295485 2974294766 Bacteria 3767688
310 2974324712 2974324384 Bacteria 3750535
311 2977264998 2977264416 Bacteria 3750737
312 2984582897 2984580707 Bacteria 3351387
313 8016255686 8016254467 Bacteria 3797036
314 Ga0395900_0119479
315 JGI25164J39214_1000299
316 JGI25165J46597_1000005
317 Ga0055527_1000004
318 Ga0055542_1000019
319 Ga0055529_1000008
320 Ga0065714_10116316
321 Ga0065714_10121054
322 Ga0068868_100191959
323 Ga0070668_100046516
324 Ga0070669_100334727
325 Ga0070675_100133052
326 Ga0070710_10004155
327 Ga0068867_101803295
328 Ga0070685_10161853
329 Ga0068853_100086224
330 Ga0068855_100080490
331 Ga0068857_101294679
332 Ga0070702_100200339
333 Ga0068852_100377397
334 Ga0068864_101899383
335 Ga0068870_10099116
336 Ga0068862_100211120
337 Ga0075368_10014070
338 Ga0075363_100043553
339 Ga0075364_10010472
340 Ga0075364_10084795
341 Ga0075367_10014344
342 Ga0075369_10007497
343 Ga0075370_10017074
344 Ga0105244_10014385
345 Ga0105243_10038841
346 Ga0105243_10065029
347 Ga0105243_10093946
348 Ga0105243_10107263
349 Ga0105237_10066813
350 Ga0105238_10579440
351 Ga0105249_10276907
352 Ga0105249_11464911
353 Ga0105246_10188739
354 Ga0157371_10214771
355 Ga0157370_10039684
356 Ga0157370_10041921
357 Ga0157369_10031886
358 Ga0157369_10211404
359 Ga0157369_10348520
360 Ga0157369_10528224
361 Ga0157369_10682622
362 Ga0163162_10047917
363 Ga0163162_12738042
364 Ga0157372_10119166
365 Ga0157375_10188942
366 Ga0157375_10983637
367 Ga0163163_10248548
368 Ga0163163_11782964
369 Ga0157380_10018776
370 Ga0157380_10089649
371 Ga0157377_10110283
372 Ga0163161_10631549
373 Ga0209672_100011
374 Ga0209147_100289
375 Ga0207427_100024
376 Ga0209437_100243
377 Ga0209258_106523
378 Ga0209646_1000030
379 Ga0209148_1000023
380 Ga0209233_1000001
381 Ga0209455_1000023
382 Ga0207655_1011806
383 Ga0207655_1012298
384 Ga0207692_10026073
385 Ga0207647_10002880
386 Ga0207643_10026094
387 Ga0207705_10000001
388 Ga0207705_10149298
389 Ga0207654_10437714
390 Ga0207671_10115330
391 Ga0207657_10087664
392 Ga0207657_10142311
393 Ga0207659_10109755
394 Ga0207664_10301843
395 Ga0207709_10005131
396 Ga0207709_10009357
397 Ga0207709_10051072
398 Ga0207709_10114554
399 Ga0207691_10213184
400 Ga0207667_10044387
401 Ga0207651_11161026
402 Ga0207668_10015393
403 Ga0207668_11386716
404 Ga0207639_10264425
405 Ga0207675_100184414
406 Ga0207683_10084072
407 Ga0207698_10435520
408 Ga0209813_10292363
409 Ga0268265_10299571
410 Ga0307513_10222337
411 Ga0307513_10226516
412 Ga0307408_100706457
413 Ga0307514_10003701
414 Ga0307405_10389282
415 Ga0307413_10211278
416 Ga0307413_10309523
417 Ga0307413_11311436
418 Ga0307410_10435090
419 Ga0307406_10112244
420 Ga0307406_10226986
421 Ga0307412_10654126
422 Ga0307409_100467336
423 Ga0307409_102137359
424 Ga0307416_100151611
425 Ga0307416_101224418
426 Ga0307414_11170873
427 Ga0395898_0000355
428 Ga0395901_0040073
429 Ga0439465_0191484
430 Ga0439465_0241449
431 Ga0451791_0926347
432 Ga0451791_1946376
433 Ga0451793_0243196
434 Ga0451793_0974447
435 Ga0451797_0956420
436 Ga0451797_1453235
437 Ga0451853_0965383
438 Ga0451853_3494075
439 Ga0451853_3544099
440 Ga0466972_0183785
441 Ga0466965_0090834
442 Ga0466968_0314624
443 Ga0495638_0098509
444 Ga0495650_0028203
445 Ga0495645_0234412
446 Ga0495656_0370526
447 Ga0495625_0484656
448 Ga0495613_0219492
449 Ga0496100_0029507
450 Ga0496101_0028497
451 Ga0496101_0060294
452 Ga0496102_0032109
453 Ga0496102_0039258
454 Ga0496102_0176414
455 Ga0496103_0069309
456 Ga0496103_0130164
457 Ga0496104_0013018
458 Ga0496104_0069407
459 Ga0496104_0141709
460 Ga0496105_0011174
461 Ga0496105_0129988
462 Ga0496105_0136758
463 Ga0496105_0225762
464 Ga0496107_0039665
465 Ga0496108_0067865
466 Ga0496108_0417726
467 Ga0496109_0170220
468 Ga0496109_0728043
469 Ga0496110_0059706
470 Ga0496111_0044780
471 Ga0496111_0382913
472 Ga0496112_0204567
473 Ga0496113_0019062
474 Ga0496113_0038671
475 Ga0496113_0135490
476 Ga0496114_0012750
477 Ga0496114_0015714
478 Ga0496114_0024054
479 Ga0496114_0157838
480 Ga0496114_0846363
481 Ga0496115_0044609
482 Ga0496115_0102633
483 Ga0496115_0440569
484 Ga0496115_0685649
485 Ga0496117_0000014
486 Ga0496117_0020489
487 Ga0496117_0077438
488 Ga0496117_0152599
489 Ga0496118_0088541
490 Ga0496118_0180089
491 Ga0496119_0001735
492 Ga0496119_0003039
493 Ga0496119_0020315
494 Ga0496119_0074046
495 Ga0496119_0310427
496 Ga0496120_0000935
497 Ga0496120_0005804
498 Ga0496120_0140952
499 Ga0496120_0223029
500 Ga0496120_0314306
501 Ga0496121_0132081
502 Ga0496122_0015575
503 Ga0496122_0066004
504 Ga0496122_0073838
505 Ga0496123_0002281
506 Ga0496123_0009533
507 Ga0496123_0086670
508 Ga0496124_0003698
509 Ga0496124_0018540
510 Ga0496124_0418991
511 Ga0496125_0001428
512 Ga0496125_0008031
513 Ga0496126_0002342
514 Ga0496126_0003983
515 Ga0496126_0439409
516 Ga0501031_0008875
517 Ga0501032_0029659
518 Ga0501032_0066834
519 Ga0501032_0405417
520 Ga0501033_0041293
521 Ga0501033_0063662
522 Ga0501033_0269043
523 Ga0501034_0046735
524 Ga0501034_0228285
525 Ga0501034_0307564
526 Ga0501036_0020457
527 Ga0501036_0038460
528 Ga0501037_0102037
529 Ga0501037_0232221
530 Ga0501038_0001027
531 Ga0501038_0215422
532 Ga0501038_0438798
533 Ga0501038_0675650
534 Ga0501039_0008445
535 Ga0501039_0023584
536 Ga0501042_0211358
537 Ga0501043_0066564
538 Ga0501043_0084785
539 Ga0501046_0015725
540 Ga0501046_0071189
541 Ga0501046_0648448
542 Ga0501047_0058726
543 Ga0501047_0169904
544 Ga0501047_0536830
545 Ga0501048_0014050
546 Ga0501048_0017843
547 Ga0501068_0063157
548 Ga0501069_0022578
549 Ga0501070_0000269
550 Ga0501070_0007555
551 Ga0501070_0079505
552 Ga0501071_0030189
553 Ga0501072_0394577
554 Ga0501073_0075647
555 Ga0501074_0172122
556 Ga0501080_0062372
557 Ga0501083_0076882
558 Ga0501035_0054745
559 Ga0501035_0083702
560 Ga0501035_0312643
561 Ga0501044_0015462
562 Ga0501044_0025663
563 Ga0501044_0199188
564 Ga0501044_0237934
565 Ga0501045_0029108
566 Ga0501045_0468243
567 Ga0501212_065346
568 nmdc:mga03n38_26590_c1
569 nmdc:mga00v17_31909_c1
570 nmdc:mga0yw44_14466_c1
571 nmdc:mga0yw44_9301_c1
572 nmdc:mga04h51_295864_c1
573 nmdc:mga07m45_239114_c1
574 nmdc:mga0sz30_13104_c1
575 Ga0500643_000124
576 Ga0500650_0075287
577 Ga0500556_0000008
578 Ga0500559_0000173
579 Ga0500568_0000003
580 Ga0500568_0000099
581 Ga0500573_0004199
582 Ga0500573_0015477
583 Ga0500573_0061676
584 Ga0500573_0116562
585 Ga0500573_0120523
586 Ga0500573_0169906
587 Ga0500573_0306387
588 Ga0500577_0003682
589 Ga0500577_0047307
590 Ga0500577_0102129
591 Ga0500604_0028324
592 Ga0500637_0479269
593 Ga0501084_0466211
594 Ga0501082_0264073
595 2588107525
596 2643847352
597 2643877148
598 2643887535
599 2643997341
600 2644097403
601 2644181832
602 2644384203
603 2723644034
604 2758225287
605 2774397471
606 2808629406
607 2809225836
608 2812325190
609 2821271846
610 2833712890
611 2852635288
612 2852644001
613 2857722690
614 2857735062
615 2870628675
616 2884767353
617 2895662065
618 2928093469
619 2939660473
620 2939661994
621 2964327888
622 2974295485
623 2974324712
624 2977264998
625 2984582897
626 8016255686

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01424

R3H

R3H domain

112

171

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bp9-assembly1.cif.gz_A crystal structure of sam-dependent methyltransferase from bacteroides fragilis in complex with s-adenosyl-l-homocysteine 0.8049 136 165
2lrr-assembly1.cif.gz_A solution structure of the r3h domain from human smubp-2 in complex with 2'-deoxyguanosine-5'-monophosphate 0.7828 107 164
3grz-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.7723 124 165
2cpm-assembly1.cif.gz_A solution structure of the r3h domain of human sperm-associated antigen 7 0.7563 104 165
2fph-assembly1.cif.gz_X cell division protein ylmh from streptococcus pneumoniae 0.7544 104 165
ID Description Score Start End Superfamily
af_Q9VX63_52_131_3.30.1370.50 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.8665 103 165 3.30.1370.50
3gkuB03 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.8547 100 165 3.30.1370.50
af_O53598_123_187_3.30.1370.50 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.8473 103 165 3.30.1370.50
af_K7M4P5_21_96_3.30.1370.50 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.8442 103 165 3.30.1370.50
af_P9WHJ3_362_544_3.10.28.10 Alpha Beta;Roll;Endonuclease I-creI;Homing endonucleases 0.8436 121 164 3.10.28.10
ID Description Score Start End GO Terms
AF-A0A4Q5TI76-F1-model_v4 Single-stranded DNA-binding protein 0.9167 93 165 GO:0003677
GO:0003723
AF-A0A0K2QVL6-F1-model_v4 deleted 0.897 93 165
AF-A0A0K2QVL6-F1-model_v4 deleted 0.8859 93 165
AF-A0A4Q5TI76-F1-model_v4 Single-stranded DNA-binding protein 0.8722 93 165 GO:0003677
GO:0003723
AF-X0XE20-F1-model_v4 R3H domain-containing protein 0.8195 99 165 GO:0003676

Map