F402150

General Info

Members Datasets Scaffolds Average Seq Length
313 237 626 132

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_11187841|Ga0105245_111878412
Length 148
Sequence MVLDTSAILAILQDEPERRLFNEAIEAAETRVLSTASFVECSLILESRYGPDGVRDLDLFISKAQIILAPVDDEQANLARRAFREYGKGRHSAGLNYGDCFSYALAVARNEALLFKGGDFSRTDVECHKASGDEFPDCIHDKPTRKRK

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
55 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
58 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
92 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
93 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
99 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
107 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
108 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
109 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
127 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
128 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
129 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
130 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
131 3300042118 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_082316_2156 Metagenome Rhizosphere
132 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
133 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
134 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
135 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
136 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
137 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
138 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
139 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
140 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
143 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
144 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
147 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
148 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
149 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
150 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
151 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
152 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
153 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
154 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
155 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
156 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
157 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
158 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
163 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
164 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
169 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
170 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
171 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
172 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
173 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
174 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
175 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
185 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
186 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
187 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
188 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
189 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
190 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
191 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
192 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
193 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
194 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
195 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
198 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
199 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
200 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
201 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
202 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
203 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
204 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
205 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
206 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
207 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
208 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
209 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
210 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
211 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
212 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
213 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
214 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
215 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
216 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
217 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
218 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
219 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
220 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
221 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
222 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
223 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
224 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
225 2791355196 Bradyrhizobium sp. Y36 Isolate Nodule
226 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
227 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
228 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
229 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
230 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
231 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
232 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
233 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
234 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
235 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
236 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
237 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.61
Metatranscriptomes 1.6
Isolates 4.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.99
Nodule 2.88
Rhizoplane 7.03
Rhizosphere 75.08
Stem 0
Stem Tuber 0
Unclassified 9.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_11187841 3300009098 Unclassified 811
2 rootH1_10157946 3300003323 Bacteria 2399
3 JGI25407J50210_10001247 3300003373 Bacteria 5687
4 Ga0070683_100001787 3300005329 Bacteria 16752
5 Ga0070683_100255406 3300005329 Bacteria 1667
6 Ga0070683_100738692 3300005329 Bacteria 943
7 Ga0070690_100927806 3300005330 Unclassified 682
8 Ga0070680_100035413 3300005336 Bacteria 4030
9 Ga0070680_101341192 3300005336 Unclassified 619
10 Ga0070682_100393837 3300005337 Bacteria 1046
11 Ga0070682_100430075 3300005337 Bacteria 1006
12 Ga0068868_101446970 3300005338 Bacteria 642
13 Ga0070660_100541277 3300005339 Bacteria 971
14 Ga0070713_100538035 3300005436 Unclassified 1105
15 Ga0070713_100871965 3300005436 Bacteria 865
16 Ga0070663_100073347 3300005455 Bacteria 2496
17 Ga0070662_100348437 3300005457 Bacteria 1213
18 Ga0070681_10052967 3300005458 Bacteria 4045
19 Ga0070679_100053025 3300005530 Bacteria 4037
20 Ga0070684_100030654 3300005535 Bacteria 4571
21 Ga0068853_100138380 3300005539 Bacteria 2185
22 Ga0070695_101080309 3300005545 Bacteria 656
23 Ga0070693_100021863 3300005547 Bacteria 3395
24 Ga0068855_100164184 3300005563 Bacteria 2519
25 Ga0068855_101145590 3300005563 Bacteria 811
26 Ga0068857_100103135 3300005577 Bacteria 2561
27 Ga0068857_100356829 3300005577 Bacteria 1355
28 Ga0068854_100605634 3300005578 Bacteria 936
29 Ga0068854_100678718 3300005578 Unclassified 887
30 Ga0068856_100260295 3300005614 Bacteria 1750
31 Ga0068852_100225142 3300005616 Bacteria 1785
32 Ga0068863_100003998 3300005841 Bacteria 14557
33 Ga0068860_100001312 3300005843 Bacteria 27012
34 Ga0068860_101972584 3300005843 Bacteria 605
35 Ga0068862_100000481 3300005844 Bacteria 42686
36 Ga0081455_10139381 3300005937 Bacteria 1886
37 Ga0081539_10130870 3300005985 Bacteria 1232
38 Ga0070717_10080554 3300006028 Bacteria 2732
39 Ga0075364_10009347 3300006051 Bacteria 5875
40 Ga0070715_10793198 3300006163 Unclassified 574
41 Ga0070716_100723066 3300006173 Unclassified 763
42 Ga0075369_10024416 3300006186 Bacteria 2504
43 Ga0097621_101570018 3300006237 Bacteria 625
44 Ga0068871_100140797 3300006358 Bacteria 2051
45 Ga0097620_100111159 3300006931 Bacteria 2802
46 Ga0075435_100174198 3300007076 Bacteria 1816
47 Ga0105240_10354115 3300009093 Bacteria 1665
48 Ga0111539_10020692 3300009094 Bacteria 8101
49 Ga0105245_10575780 3300009098 Bacteria 1150
50 Ga0105247_10002762 3300009101 Bacteria 11754
51 Ga0105241_10615525 3300009174 Unclassified 982
52 Ga0105242_12882048 3300009176 Bacteria 531
53 Ga0105237_10155234 3300009545 Bacteria 2285
54 Ga0105237_10254883 3300009545 Bacteria 1757
55 Ga0105237_10325559 3300009545 Bacteria 1541
56 Ga0105238_10129856 3300009551 Bacteria 2498
57 Ga0105249_10000240 3300009553 Bacteria 61072
58 Ga0105239_10134424 3300010375 Bacteria 2753
59 Ga0105239_10380755 3300010375 Bacteria 1595
60 Ga0105239_10415398 3300010375 Bacteria 1524
61 Ga0105239_10931835 3300010375 Bacteria 997
62 Ga0105246_11826030 3300011119 Bacteria 581
63 Ga0163162_12523383 3300013306 Bacteria 591
64 Ga0157372_10286706 3300013307 Bacteria 1915
65 Ga0157372_10488567 3300013307 Bacteria 1435
66 Ga0157375_10360578 3300013308 Bacteria 1620
67 Ga0157375_10643179 3300013308 Bacteria 1217
68 Ga0157375_11981763 3300013308 Bacteria 692
69 Ga0163163_10249457 3300014325 Bacteria 1825
70 Ga0163163_10839350 3300014325 Bacteria 982
71 Ga0163163_12344667 3300014325 Bacteria 592
72 Ga0157379_11169026 3300014968 Bacteria 739
73 Ga0157376_10264629 3300014969 Bacteria 1613
74 Ga0157376_11776975 3300014969 Bacteria 652
75 Ga0213873_10001461 3300021358 Bacteria 3928
76 Ga0213874_10309505 3300021377 Bacteria 596
77 Ga0213876_10000797 3300021384 Bacteria 21401
78 Ga0213876_10000850 3300021384 Bacteria 20551
79 Ga0209233_1030633 3300025261 Bacteria 1266
80 Ga0209256_1038048 3300025299 Bacteria 1248
81 Ga0207426_1008122 3300025302 Bacteria 4289
82 Ga0207692_10269889 3300025898 Unclassified 1026
83 Ga0207710_10102268 3300025900 Bacteria 1352
84 Ga0207680_10352993 3300025903 Unclassified 1033
85 Ga0207685_10640585 3300025905 Unclassified 574
86 Ga0207705_10064508 3300025909 Bacteria 2646
87 Ga0207654_10213246 3300025911 Bacteria 1277
88 Ga0207707_10005226 3300025912 Bacteria 11379
89 Ga0207695_10617650 3300025913 Bacteria 965
90 Ga0207671_10231627 3300025914 Bacteria 1449
91 Ga0207671_10513488 3300025914 Bacteria 955
92 Ga0207660_10031280 3300025917 Bacteria 3663
93 Ga0207657_10656374 3300025919 Bacteria 816
94 Ga0207681_10294662 3300025923 Bacteria 1282
95 Ga0207694_10310168 3300025924 Bacteria 1300
96 Ga0207687_11174838 3300025927 Unclassified 659
97 Ga0207700_10556079 3300025928 Unclassified 1019
98 Ga0207664_10032338 3300025929 Bacteria 4008
99 Ga0207706_10393956 3300025933 Bacteria 1201
100 Ga0207661_10001002 3300025944 Bacteria 18644
101 Ga0207661_10218713 3300025944 Bacteria 1683
102 Ga0207661_11153199 3300025944 Bacteria 713
103 Ga0207712_10000196 3300025961 Bacteria 61501
104 Ga0207668_10573840 3300025972 Bacteria 980
105 Ga0207640_10479016 3300025981 Bacteria 1032
106 Ga0207640_10503446 3300025981 Unclassified 1009
107 Ga0207640_10549841 3300025981 Bacteria 970
108 Ga0207639_10309232 3300026041 Bacteria 1399
109 Ga0207678_10280421 3300026067 Bacteria 1430
110 Ga0207678_11271313 3300026067 Bacteria 651
111 Ga0207641_10003604 3300026088 Bacteria 13666
112 Ga0207648_10763573 3300026089 Bacteria 898
113 Ga0207674_10099729 3300026116 Bacteria 2886
114 Ga0207698_10221264 3300026142 Bacteria 1711
115 Ga0268265_10000309 3300028380 Bacteria 54201
116 Ga0268264_10001117 3300028381 Bacteria 26438
117 Ga0268264_11546935 3300028381 Bacteria 674
118 Ga0265318_10000115 3300028577 Bacteria 74110
119 Ga0307517_10000176 3300028786 Bacteria 105402
120 Ga0265328_10177308 3300031239 Unclassified 806
121 Ga0265325_10087604 3300031241 Bacteria 1539
122 Ga0265340_10356933 3300031247 Bacteria 646
123 Ga0265316_10015959 3300031344 Bacteria 6537
124 Ga0307509_10209202 3300031507 Bacteria 1777
125 Ga0307509_10718936 3300031507 Unclassified 665
126 Ga0307408_100004560 3300031548 Bacteria 9383
127 Ga0307408_100067016 3300031548 Bacteria 2639
128 Ga0265313_10330913 3300031595 Unclassified 607
129 Ga0316579_10147571 3300031691 Bacteria 1134
130 Ga0316576_10110146 3300031727 Bacteria 2063
131 Ga0316578_10201065 3300031728 Bacteria 1199
132 Ga0316577_10074566 3300031733 Bacteria 1894
133 Ga0307410_10296713 3300031852 Bacteria 1274
134 Ga0307406_10167542 3300031901 Bacteria 1586
135 Ga0307416_100066491 3300032002 Bacteria 2968
136 Ga0307416_100189871 3300032002 Bacteria 1936
137 Ga0307415_100160280 3300032126 Unclassified 1743
138 Ga0316583_10057946 3300032133 Bacteria 1360
139 Ga0316585_10006406 3300032137 Bacteria 3365
140 Ga0316580_10039776 3300032139 Bacteria 1452
141 Ga0316593_10027749 3300032168 Bacteria 1819
142 Ga0316592_1009661 3300033524 Bacteria 1933
143 Ga0316588_1004361 3300033528 Bacteria 2672
144 Ga0316587_1037383 3300033529 Bacteria 871
145 Ga0316596_1018700 3300033541 Bacteria 1753
146 Ga0316574_0071781 3300035398 Bacteria 2187
147 Ga0373935_0455531 3300035692 Bacteria 925
148 Ga0373937_0582638 3300036401 Bacteria 1062
149 Ga0316582_0073114 3300036647 Bacteria 2224
150 Ga0373925_0475137 3300037068 Bacteria 1025
151 Ga0395900_0182184 3300037418 Bacteria 2134
152 Ga0395898_0101098 3300037466 Bacteria 2769
153 Ga0436365_0178572 3300039437 Bacteria 58477
154 Ga0436365_0231312 3300039437 Bacteria 21381
155 Ga0436365_0415375 3300039437 Bacteria 502
156 Ga0436360_0529467 3300039438 Bacteria 1822
157 Ga0436361_0512591 3300039447 Unclassified 995
158 Ga0436363_0167722 3300039450 Bacteria 1571
159 Ga0436363_0913940 3300039450 Bacteria 2302
160 Ga0436362_1187182 3300039453 Bacteria 4206
161 Ga0451793_0354528 3300041452 Bacteria 622
162 Ga0451802_1435292 3300041460 Bacteria 580
163 Ga0439448_0253546 3300042005 Unclassified 621
164 Ga0439450_058571 3300042008 Bacteria 927
165 Ga0439463_006999 3300042016 Bacteria 2782
166 Ga0450914_034924 3300042118 Unclassified 619
167 Ga0450900_032792 3300042136 Bacteria 759
168 Ga0439435_0337951 3300042436 Bacteria 521
169 Ga0439459_0041362 3300042438 Bacteria 981
170 Ga0439464_0137226 3300042439 Bacteria 760
171 Ga0439460_0023003 3300042461 Unclassified 1715
172 Ga0439440_0185468 3300042993 Unclassified 611
173 Ga0466972_0000299 3300044658 Bacteria 30012
174 Ga0466966_0004154 3300044684 Bacteria 9559
175 Ga0466966_0989540 3300044684 Bacteria 507
176 Ga0466961_0002447 3300044693 Bacteria 11519
177 Ga0453684_0023049 3300044712 Bacteria 9199
178 Ga0453684_0025180 3300044712 Bacteria 8649
179 Ga0466968_0070669 3300044735 Bacteria 1519
180 Ga0466960_0337807 3300044901 Bacteria 856
181 Ga0466959_0018968 3300045049 Bacteria 5054
182 Ga0466959_0268129 3300045049 Bacteria 1174
183 Ga0466958_0065579 3300045836 Bacteria 2216
184 Ga0495627_001525 3300046453 Bacteria 13302
185 Ga0495629_0150548 3300046459 Bacteria 1617
186 Ga0495651_0740275 3300046462 Bacteria 610
187 Ga0495582_0542846 3300046473 Bacteria 672
188 Ga0495664_0070942 3300046477 Bacteria 2080
189 Ga0495618_0272835 3300046514 Bacteria 1057
190 Ga0495652_0701176 3300046529 Bacteria 681
191 Ga0495640_0253920 3300046533 Bacteria 1100
192 Ga0495645_0024434 3300046543 Bacteria 4384
193 Ga0495667_0057126 3300046559 Bacteria 2566
194 Ga0495667_0247380 3300046559 Bacteria 1135
195 Ga0495661_0261454 3300046665 Bacteria 879
196 Ga0495657_0910312 3300046675 Bacteria 500
197 Ga0495600_0210219 3300046809 Bacteria 1247
198 Ga0495674_0248011 3300047319 Bacteria 1466
199 Ga0495674_0835598 3300047319 Bacteria 714
200 Ga0495675_0211721 3300047444 Bacteria 1176
201 Ga0495686_0488453 3300047472 Bacteria 650
202 Ga0496100_0177261 3300048903 Bacteria 1539
203 Ga0496100_0314965 3300048903 Bacteria 1174
204 Ga0496101_0006202 3300048904 Bacteria 7687
205 Ga0496101_0058177 3300048904 Bacteria 2798
206 Ga0496101_0283874 3300048904 Bacteria 1294
207 Ga0496102_0497889 3300048905 Bacteria 1140
208 Ga0496102_1274361 3300048905 Bacteria 654
209 Ga0496104_0001715 3300048907 Bacteria 18910
210 Ga0496105_0001812 3300048908 Bacteria 15289
211 Ga0496105_0752703 3300048908 Bacteria 744
212 Ga0496106_0395130 3300048909 Bacteria 1111
213 Ga0496106_1220636 3300048909 Bacteria 586
214 Ga0496109_0236240 3300048912 Bacteria 1720
215 Ga0496109_1945361 3300048912 Bacteria 520
216 Ga0496110_0261964 3300048913 Bacteria 1574
217 Ga0496110_1061515 3300048913 Bacteria 718
218 Ga0496111_1217786 3300048914 Bacteria 533
219 Ga0496114_0019288 3300048917 Bacteria 5524
220 Ga0496114_0397770 3300048917 Bacteria 1220
221 Ga0496114_0970047 3300048917 Bacteria 733
222 Ga0496118_0335403 3300048921 Bacteria 813
223 Ga0496120_0270940 3300048923 Bacteria 789
224 Ga0496121_0348758 3300048924 Bacteria 987
225 Ga0496122_0147345 3300048925 Bacteria 1460
226 Ga0496126_0510401 3300048929 Bacteria 959
227 Ga0496126_1012475 3300048929 Unclassified 623
228 Ga0501034_0401738 3300049571 Bacteria 1293
229 Ga0501034_0904309 3300049571 Bacteria 770
230 Ga0501034_1364357 3300049571 Unclassified 584
231 Ga0501036_0486913 3300049572 Bacteria 1027
232 Ga0501038_0823750 3300049574 Bacteria 689
233 Ga0501067_0023890 3300049583 Bacteria 3390
234 Ga0501067_0033560 3300049583 Bacteria 2847
235 Ga0501067_0051065 3300049583 Bacteria 2292
236 Ga0501068_0060474 3300049584 Bacteria 2300
237 Ga0501069_0015173 3300049585 Bacteria 4128
238 Ga0501069_0027151 3300049585 Bacteria 3137
239 Ga0501069_0330578 3300049585 Bacteria 896
240 Ga0501069_0590951 3300049585 Bacteria 666
241 Ga0501070_0015598 3300049586 Bacteria 6389
242 Ga0501070_0098814 3300049586 Bacteria 2414
243 Ga0501070_0124558 3300049586 Bacteria 2130
244 Ga0501070_0919538 3300049586 Bacteria 682
245 Ga0501070_1074647 3300049586 Bacteria 621
246 Ga0501071_0017319 3300049587 Bacteria 4966
247 Ga0501071_0086045 3300049587 Bacteria 2305
248 Ga0501073_0028628 3300049589 Bacteria 3980
249 Ga0501073_0070285 3300049589 Bacteria 2439
250 Ga0501073_0487500 3300049589 Bacteria 852
251 Ga0501074_0053475 3300049590 Bacteria 2912
252 Ga0501074_0123865 3300049590 Bacteria 1848
253 Ga0501077_0552901 3300049593 Unclassified 739
254 Ga0501077_0721369 3300049593 Bacteria 641
255 Ga0501079_0158387 3300049741 Bacteria 1765
256 Ga0501080_0157543 3300049742 Bacteria 2097
257 Ga0501080_0320802 3300049742 Bacteria 1402
258 Ga0501080_1226088 3300049742 Bacteria 644
259 Ga0501081_0101058 3300049743 Bacteria 2039
260 Ga0501083_0089388 3300049744 Bacteria 2035
261 Ga0501044_0598427 3300049823 Bacteria 996
262 Ga0501044_1286968 3300049823 Unclassified 598
263 Ga0501284_03455 3300050005 Bacteria 882
264 nmdc:mga03n38_779235_c1 3300050490 Bacteria 555
265 nmdc:mga00v17_28040_c1 3300050491 Bacteria 3294
266 nmdc:mga08y16_310534_c1 3300050511 Bacteria 1624
267 nmdc:mga0rr50_144048_c1 3300050513 Bacteria 1919
268 nmdc:mga0sz30_35694_c1 3300050516 Bacteria 2076
269 Ga0495601_0616873 3300053077 Bacteria 695
270 Ga0495612_0020095 3300053078 Bacteria 2676
271 Ga0495612_0082120 3300053078 Bacteria 1355
272 Ga0495595_0010932 3300053084 Bacteria 3787
273 Ga0495619_0006465 3300053085 Bacteria 7421
274 Ga0495619_0013407 3300053085 Bacteria 5164
275 Ga0500578_0248163 3300053086 Bacteria 1073
276 Ga0500647_0122126 3300053091 Bacteria 1232
277 Ga0500583_0065329 3300053092 Bacteria 1728
278 Ga0500557_000021 3300053105 Bacteria 89662
279 Ga0500597_148934 3300053120 Bacteria 1005
280 Ga0500608_313228 3300053122 Bacteria 575
281 Ga0500559_0044594 3300053136 Bacteria 1940
282 Ga0500568_0070437 3300053139 Bacteria 1340
283 Ga0500573_0065208 3300053140 Bacteria 2082
284 Ga0500590_072819 3300053148 Bacteria 1705
285 Ga0500616_0373224 3300053153 Unclassified 575
286 Ga0500638_369506 3300053162 Bacteria 525
287 Ga0500636_0029616 3300053177 Bacteria 3234
288 Ga0500636_0189791 3300053177 Bacteria 1096
289 Ga0500637_0213755 3300053178 Bacteria 1093
290 Ga0500625_015091 3300053729 Bacteria 3581
291 Ga0500596_038199 3300053735 Bacteria 760
292 Ga0501084_0131763 3300054114 Bacteria 2104
293 Ga0501082_0089052 3300060353 Bacteria 2664
294 Ga0501082_0124401 3300060353 Bacteria 2236
295 Ga0501082_0211647 3300060353 Bacteria 1686
296 Ga0501082_0655088 3300060353 Bacteria 919
297 Ga0466962_0069146 3300061719 Bacteria 1687
298 Ga0530510_1355892 3300061734 Unclassified 546
299 2513642186 2513237094 Bacteria 8789602
300 2513873352 2513237139 Bacteria 8737671
301 2793062231 2791355196 Bacteria 7323613
302 2805920700 2802429603 Bacteria 8777136
303 2844315540 2844315083 Bacteria 8138177
304 2847942336 2847939898 Bacteria 8606328
305 2852666474 2852663356 Bacteria 4090475
306 2903733691 2903727486 Bacteria 8281579
307 2906609461 2906602504 Bacteria 8295279
308 2932794147 2932794094 Bacteria 7915132
309 2932809223 2932801729 Bacteria 7987968
310 2935889174 2935883170 Bacteria 7964738
311 2946082570 2946080515 Bacteria 4310960
312 8024483960 8024479707 Bacteria 6954785
313 8056971488 8056967851 Bacteria 9038162
314 Ga0105245_11187841
315 rootH1_10157946
316 JGI25407J50210_10001247
317 Ga0070683_100001787
318 Ga0070683_100255406
319 Ga0070683_100738692
320 Ga0070690_100927806
321 Ga0070680_100035413
322 Ga0070680_101341192
323 Ga0070682_100393837
324 Ga0070682_100430075
325 Ga0068868_101446970
326 Ga0070660_100541277
327 Ga0070713_100538035
328 Ga0070713_100871965
329 Ga0070663_100073347
330 Ga0070662_100348437
331 Ga0070681_10052967
332 Ga0070679_100053025
333 Ga0070684_100030654
334 Ga0068853_100138380
335 Ga0070695_101080309
336 Ga0070693_100021863
337 Ga0068855_100164184
338 Ga0068855_101145590
339 Ga0068857_100103135
340 Ga0068857_100356829
341 Ga0068854_100605634
342 Ga0068854_100678718
343 Ga0068856_100260295
344 Ga0068852_100225142
345 Ga0068863_100003998
346 Ga0068860_100001312
347 Ga0068860_101972584
348 Ga0068862_100000481
349 Ga0081455_10139381
350 Ga0081539_10130870
351 Ga0070717_10080554
352 Ga0075364_10009347
353 Ga0070715_10793198
354 Ga0070716_100723066
355 Ga0075369_10024416
356 Ga0097621_101570018
357 Ga0068871_100140797
358 Ga0097620_100111159
359 Ga0075435_100174198
360 Ga0105240_10354115
361 Ga0111539_10020692
362 Ga0105245_10575780
363 Ga0105247_10002762
364 Ga0105241_10615525
365 Ga0105242_12882048
366 Ga0105237_10155234
367 Ga0105237_10254883
368 Ga0105237_10325559
369 Ga0105238_10129856
370 Ga0105249_10000240
371 Ga0105239_10134424
372 Ga0105239_10380755
373 Ga0105239_10415398
374 Ga0105239_10931835
375 Ga0105246_11826030
376 Ga0163162_12523383
377 Ga0157372_10286706
378 Ga0157372_10488567
379 Ga0157375_10360578
380 Ga0157375_10643179
381 Ga0157375_11981763
382 Ga0163163_10249457
383 Ga0163163_10839350
384 Ga0163163_12344667
385 Ga0157379_11169026
386 Ga0157376_10264629
387 Ga0157376_11776975
388 Ga0213873_10001461
389 Ga0213874_10309505
390 Ga0213876_10000797
391 Ga0213876_10000850
392 Ga0209233_1030633
393 Ga0209256_1038048
394 Ga0207426_1008122
395 Ga0207692_10269889
396 Ga0207710_10102268
397 Ga0207680_10352993
398 Ga0207685_10640585
399 Ga0207705_10064508
400 Ga0207654_10213246
401 Ga0207707_10005226
402 Ga0207695_10617650
403 Ga0207671_10231627
404 Ga0207671_10513488
405 Ga0207660_10031280
406 Ga0207657_10656374
407 Ga0207681_10294662
408 Ga0207694_10310168
409 Ga0207687_11174838
410 Ga0207700_10556079
411 Ga0207664_10032338
412 Ga0207706_10393956
413 Ga0207661_10001002
414 Ga0207661_10218713
415 Ga0207661_11153199
416 Ga0207712_10000196
417 Ga0207668_10573840
418 Ga0207640_10479016
419 Ga0207640_10503446
420 Ga0207640_10549841
421 Ga0207639_10309232
422 Ga0207678_10280421
423 Ga0207678_11271313
424 Ga0207641_10003604
425 Ga0207648_10763573
426 Ga0207674_10099729
427 Ga0207698_10221264
428 Ga0268265_10000309
429 Ga0268264_10001117
430 Ga0268264_11546935
431 Ga0265318_10000115
432 Ga0307517_10000176
433 Ga0265328_10177308
434 Ga0265325_10087604
435 Ga0265340_10356933
436 Ga0265316_10015959
437 Ga0307509_10209202
438 Ga0307509_10718936
439 Ga0307408_100004560
440 Ga0307408_100067016
441 Ga0265313_10330913
442 Ga0316579_10147571
443 Ga0316576_10110146
444 Ga0316578_10201065
445 Ga0316577_10074566
446 Ga0307410_10296713
447 Ga0307406_10167542
448 Ga0307416_100066491
449 Ga0307416_100189871
450 Ga0307415_100160280
451 Ga0316583_10057946
452 Ga0316585_10006406
453 Ga0316580_10039776
454 Ga0316593_10027749
455 Ga0316592_1009661
456 Ga0316588_1004361
457 Ga0316587_1037383
458 Ga0316596_1018700
459 Ga0316574_0071781
460 Ga0373935_0455531
461 Ga0373937_0582638
462 Ga0316582_0073114
463 Ga0373925_0475137
464 Ga0395900_0182184
465 Ga0395898_0101098
466 Ga0436365_0178572
467 Ga0436365_0231312
468 Ga0436365_0415375
469 Ga0436360_0529467
470 Ga0436361_0512591
471 Ga0436363_0167722
472 Ga0436363_0913940
473 Ga0436362_1187182
474 Ga0451793_0354528
475 Ga0451802_1435292
476 Ga0439448_0253546
477 Ga0439450_058571
478 Ga0439463_006999
479 Ga0450914_034924
480 Ga0450900_032792
481 Ga0439435_0337951
482 Ga0439459_0041362
483 Ga0439464_0137226
484 Ga0439460_0023003
485 Ga0439440_0185468
486 Ga0466972_0000299
487 Ga0466966_0004154
488 Ga0466966_0989540
489 Ga0466961_0002447
490 Ga0453684_0023049
491 Ga0453684_0025180
492 Ga0466968_0070669
493 Ga0466960_0337807
494 Ga0466959_0018968
495 Ga0466959_0268129
496 Ga0466958_0065579
497 Ga0495627_001525
498 Ga0495629_0150548
499 Ga0495651_0740275
500 Ga0495582_0542846
501 Ga0495664_0070942
502 Ga0495618_0272835
503 Ga0495652_0701176
504 Ga0495640_0253920
505 Ga0495645_0024434
506 Ga0495667_0057126
507 Ga0495667_0247380
508 Ga0495661_0261454
509 Ga0495657_0910312
510 Ga0495600_0210219
511 Ga0495674_0248011
512 Ga0495674_0835598
513 Ga0495675_0211721
514 Ga0495686_0488453
515 Ga0496100_0177261
516 Ga0496100_0314965
517 Ga0496101_0006202
518 Ga0496101_0058177
519 Ga0496101_0283874
520 Ga0496102_0497889
521 Ga0496102_1274361
522 Ga0496104_0001715
523 Ga0496105_0001812
524 Ga0496105_0752703
525 Ga0496106_0395130
526 Ga0496106_1220636
527 Ga0496109_0236240
528 Ga0496109_1945361
529 Ga0496110_0261964
530 Ga0496110_1061515
531 Ga0496111_1217786
532 Ga0496114_0019288
533 Ga0496114_0397770
534 Ga0496114_0970047
535 Ga0496118_0335403
536 Ga0496120_0270940
537 Ga0496121_0348758
538 Ga0496122_0147345
539 Ga0496126_0510401
540 Ga0496126_1012475
541 Ga0501034_0401738
542 Ga0501034_0904309
543 Ga0501034_1364357
544 Ga0501036_0486913
545 Ga0501038_0823750
546 Ga0501067_0023890
547 Ga0501067_0033560
548 Ga0501067_0051065
549 Ga0501068_0060474
550 Ga0501069_0015173
551 Ga0501069_0027151
552 Ga0501069_0330578
553 Ga0501069_0590951
554 Ga0501070_0015598
555 Ga0501070_0098814
556 Ga0501070_0124558
557 Ga0501070_0919538
558 Ga0501070_1074647
559 Ga0501071_0017319
560 Ga0501071_0086045
561 Ga0501073_0028628
562 Ga0501073_0070285
563 Ga0501073_0487500
564 Ga0501074_0053475
565 Ga0501074_0123865
566 Ga0501077_0552901
567 Ga0501077_0721369
568 Ga0501079_0158387
569 Ga0501080_0157543
570 Ga0501080_0320802
571 Ga0501080_1226088
572 Ga0501081_0101058
573 Ga0501083_0089388
574 Ga0501044_0598427
575 Ga0501044_1286968
576 Ga0501284_03455
577 nmdc:mga03n38_779235_c1
578 nmdc:mga00v17_28040_c1
579 nmdc:mga08y16_310534_c1
580 nmdc:mga0rr50_144048_c1
581 nmdc:mga0sz30_35694_c1
582 Ga0495601_0616873
583 Ga0495612_0020095
584 Ga0495612_0082120
585 Ga0495595_0010932
586 Ga0495619_0006465
587 Ga0495619_0013407
588 Ga0500578_0248163
589 Ga0500647_0122126
590 Ga0500583_0065329
591 Ga0500557_000021
592 Ga0500597_148934
593 Ga0500608_313228
594 Ga0500559_0044594
595 Ga0500568_0070437
596 Ga0500573_0065208
597 Ga0500590_072819
598 Ga0500616_0373224
599 Ga0500638_369506
600 Ga0500636_0029616
601 Ga0500636_0189791
602 Ga0500637_0213755
603 Ga0500625_015091
604 Ga0500596_038199
605 Ga0501084_0131763
606 Ga0501082_0089052
607 Ga0501082_0124401
608 Ga0501082_0211647
609 Ga0501082_0655088
610 Ga0466962_0069146
611 Ga0530510_1355892
612 2513642186
613 2513873352
614 2793062231
615 2805920700
616 2844315540
617 2847942336
618 2852666474
619 2903733691
620 2906609461
621 2932794147
622 2932809223
623 2935889174
624 2946082570
625 8024483960
626 8056971488

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

1

126

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xgr-assembly1.cif.gz_A crystal structure of addiction module from mycobacterial species 0.9753 1 127
4xgq-assembly2.cif.gz_G crystal structure of addiction module from mycobacterial species 0.9588 1 131
4xgq-assembly2.cif.gz_G crystal structure of addiction module from mycobacterial species 0.9447 1 131
4xgr-assembly1.cif.gz_A crystal structure of addiction module from mycobacterial species 0.9307 1 127
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.8584 2 124
ID Description Score Start End Superfamily
af_P9WF81_1_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9813 1 129 3.40.50.1010
af_P9WF57_1_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9721 1 127 3.40.50.1010
af_P9WF65_1_129_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9671 1 126 3.40.50.1010
af_P9WF81_1_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9665 1 129 3.40.50.1010
4xgrG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9636 3 131 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A6L5FQ28-F1-model_v4 PIN domain-containing protein 1.005 67 127
AF-A0QRY6-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Endoribonuclease VapC) (Toxin VapC) 1.001 1 127 GO:0000287
GO:0003677
GO:0003723
GO:0004540
AF-A0A661JLJ2-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 1 1 127 GO:0000287
GO:0004540
GO:0090729
AF-A0A3N5IJA5-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9999 25 127
AF-A0A1U7JB84-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9994 1 127 GO:0000287
GO:0004540
GO:0090729

Map