F401618

General Info

Members Datasets Scaffolds Average Seq Length
312 221 624 225

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100001981|Ga0068856_10000198110
Length 254
Sequence MIPWIQIDKTKVPGAEVELSLKRRGAEFSMMLGQNELMNSRLSGSEEALATLSCRRIESVKRPHILIGGLGMGFTLRAALAVLGTDARIVVAELVPSVIAWARGPMAELFGKSLSDPRAEIREADVTDVIASSRQAFDAVLLDVDNGPEGLIRKANNALYDEKGLQAIRRALRPGGVLAVWSSGPNIAFTKRLRDADFDVNEVGVRATTKRSGAHHVIWFATKPKAPAKTSKPANSKSSNFKNKFPKRQKPAAN

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
76 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
77 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
82 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
83 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
84 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
88 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
94 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
95 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
97 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
98 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
101 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
102 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
112 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
116 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
117 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
118 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
119 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
120 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
128 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
129 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
132 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
133 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
134 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
140 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
146 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
147 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
148 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
149 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
150 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
151 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
152 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
153 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
154 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
155 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
156 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
160 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
161 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
165 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
166 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
167 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
168 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
169 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
170 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
171 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
172 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
173 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
174 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
175 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
176 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
177 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
178 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
179 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
180 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
181 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
182 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
183 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
184 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
185 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
186 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
187 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
188 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
189 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
190 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
191 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
192 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
193 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
194 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
195 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
196 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
197 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
198 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
200 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
201 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
202 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
203 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
204 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
205 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
206 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
207 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
208 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
209 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
210 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
211 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
212 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
213 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
214 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
215 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
216 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
217 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
218 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
219 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
220 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
221 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.12
Metatranscriptomes 0
Isolates 2.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.21
Nodule 0.32
Rhizoplane 8.97
Rhizosphere 80.13
Stem 0
Stem Tuber 0
Unclassified 1.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100001981 3300005614 Bacteria 21353
2 JGI24751J29686_10000823 3300002459 Bacteria 7190
3 Ga0070690_100074151 3300005330 Unclassified 2215
4 Ga0070670_100000672 3300005331 Bacteria 26552
5 Ga0070670_100116966 3300005331 Bacteria 2299
6 Ga0068869_100017610 3300005334 Bacteria 4847
7 Ga0070666_10078072 3300005335 Unclassified 2260
8 Ga0070689_100070372 3300005340 Bacteria 2731
9 Ga0070692_10006173 3300005345 Bacteria 5181
10 Ga0070668_100000045 3300005347 Bacteria 77362
11 Ga0070668_100001696 3300005347 Bacteria 15983
12 Ga0070669_100016832 3300005353 Bacteria 5218
13 Ga0070671_100000039 3300005355 Bacteria 93404
14 Ga0070671_100035096 3300005355 Bacteria 4154
15 Ga0070671_100063288 3300005355 Bacteria 3080
16 Ga0070667_100000104 3300005367 Bacteria 106938
17 Ga0070667_100013060 3300005367 Bacteria 6865
18 Ga0070663_100257625 3300005455 Bacteria 1383
19 Ga0070678_100070389 3300005456 Bacteria 2615
20 Ga0070698_100309705 3300005471 Bacteria 1510
21 Ga0068853_100203332 3300005539 Bacteria 1803
22 Ga0070686_100053556 3300005544 Archaea 2577
23 Ga0070665_100062394 3300005548 Bacteria 3737
24 Ga0070665_100156700 3300005548 Bacteria 2279
25 Ga0068855_100379645 3300005563 Bacteria 1552
26 Ga0068857_100008398 3300005577 Bacteria 8923
27 Ga0068856_100366129 3300005614 Bacteria 1460
28 Ga0068852_100036107 3300005616 Bacteria 4131
29 Ga0068852_100052668 3300005616 Bacteria 3499
30 Ga0068859_100071686 3300005617 Bacteria 3500
31 Ga0068861_100003402 3300005719 Bacteria 10554
32 Ga0068851_10005392 3300005834 Bacteria 5800
33 Ga0068863_100032610 3300005841 Bacteria 4963
34 Ga0068863_100079326 3300005841 Bacteria 3109
35 Ga0068858_100013289 3300005842 Bacteria 7763
36 Ga0068860_100000197 3300005843 Bacteria 96240
37 Ga0068860_100081345 3300005843 Bacteria 3080
38 Ga0068860_100122571 3300005843 Unclassified 2490
39 Ga0068862_100000031 3300005844 Bacteria 180203
40 Ga0068862_100009962 3300005844 Bacteria 7851
41 Ga0068862_100038157 3300005844 Bacteria 4073
42 Ga0068862_100158326 3300005844 Unclassified 2020
43 Ga0068862_100530609 3300005844 Bacteria 1121
44 Ga0075365_10146568 3300006038 Bacteria 1640
45 Ga0068871_100668126 3300006358 Bacteria 950
46 Ga0075429_100043719 3300006880 Bacteria 3898
47 Ga0097620_100071686 3300006931 Bacteria 3500
48 Ga0099794_10002631 3300007265 Bacteria 6676
49 Ga0099794_10054625 3300007265 Bacteria 1928
50 Ga0099795_10029084 3300007788 Bacteria 1886
51 Ga0099795_10140569 3300007788 Bacteria 982
52 Ga0105240_10034660 3300009093 Bacteria 6509
53 Ga0105240_10047946 3300009093 Bacteria 5403
54 Ga0105240_10520373 3300009093 Bacteria 1320
55 Ga0111539_10552892 3300009094 Bacteria 1341
56 Ga0114129_10015758 3300009147 Bacteria 10746
57 Ga0105248_10648286 3300009177 Bacteria 1191
58 Ga0105237_10016297 3300009545 Bacteria 7724
59 Ga0105238_10002194 3300009551 Bacteria 19716
60 Ga0105249_10267218 3300009553 Bacteria 1702
61 Ga0099796_10142247 3300010159 Bacteria 938
62 Ga0105239_10471550 3300010375 Bacteria 1425
63 Ga0157371_10040833 3300013102 Bacteria 3312
64 Ga0157369_10002885 3300013105 Bacteria 20538
65 Ga0157374_10481657 3300013296 Bacteria 1244
66 Ga0163162_10046843 3300013306 Bacteria 4334
67 Ga0213876_10000120 3300021384 Bacteria 85450
68 Ga0207656_10004606 3300025321 Bacteria 4829
69 Ga0207680_10010251 3300025903 Bacteria 4682
70 Ga0207695_10186861 3300025913 Bacteria 1991
71 Ga0207660_10142053 3300025917 Bacteria 1836
72 Ga0207657_10002721 3300025919 Bacteria 19035
73 Ga0207681_10008811 3300025923 Bacteria 6164
74 Ga0207650_10000867 3300025925 Bacteria 22922
75 Ga0207650_10339277 3300025925 Bacteria 1234
76 Ga0207644_10000022 3300025931 Bacteria 160689
77 Ga0207644_10001501 3300025931 Bacteria 15032
78 Ga0207644_10022821 3300025931 Bacteria 4278
79 Ga0207689_10047149 3300025942 Bacteria 3560
80 Ga0207661_10033813 3300025944 Bacteria 3971
81 Ga0207667_10006192 3300025949 Bacteria 14525
82 Ga0207712_10168528 3300025961 Bacteria 1709
83 Ga0207668_10000103 3300025972 Bacteria 60096
84 Ga0207668_10001303 3300025972 Bacteria 14823
85 Ga0207668_10272895 3300025972 Bacteria 1383
86 Ga0207658_10001305 3300025986 Bacteria 19652
87 Ga0207658_10002143 3300025986 Bacteria 14663
88 Ga0207703_10000689 3300026035 Bacteria 33409
89 Ga0207639_10124790 3300026041 Bacteria 2121
90 Ga0207678_10126450 3300026067 Bacteria 2180
91 Ga0207678_10354098 3300026067 Bacteria 1266
92 Ga0207702_10000640 3300026078 Bacteria 38336
93 Ga0207641_10000207 3300026088 Bacteria 77525
94 Ga0207641_10002760 3300026088 Bacteria 16013
95 Ga0207641_10005771 3300026088 Bacteria 10511
96 Ga0207641_10030394 3300026088 Bacteria 4475
97 Ga0207674_10005746 3300026116 Bacteria 14717
98 Ga0207674_10012569 3300026116 Bacteria 9460
99 Ga0207683_10206839 3300026121 Bacteria 1785
100 Ga0207698_10031667 3300026142 Bacteria 3821
101 Ga0207698_10231556 3300026142 Bacteria 1677
102 Ga0209588_1003960 3300027671 Bacteria 4142
103 Ga0209588_1009252 3300027671 Bacteria 2940
104 Ga0209974_10013038 3300027876 Bacteria 2772
105 Ga0268265_10001219 3300028380 Bacteria 22338
106 Ga0268265_10006159 3300028380 Bacteria 8125
107 Ga0268265_10008474 3300028380 Bacteria 6946
108 Ga0268265_10944351 3300028380 Bacteria 849
109 Ga0268264_10000190 3300028381 Bacteria 127747
110 Ga0268264_10000534 3300028381 Bacteria 48224
111 Ga0268264_10090803 3300028381 Unclassified 2633
112 Ga0265334_10037345 3300028573 Bacteria 1915
113 Ga0265332_10035856 3300031238 Bacteria 2153
114 Ga0265332_10039602 3300031238 Bacteria 2041
115 Ga0265328_10047836 3300031239 Bacteria 1572
116 Ga0265325_10010768 3300031241 Bacteria 5279
117 Ga0265339_10062526 3300031249 Bacteria 2001
118 Ga0265331_10081072 3300031250 Bacteria 1507
119 Ga0265316_10054339 3300031344 Bacteria 3136
120 Ga0265316_10109575 3300031344 Bacteria 2092
121 Ga0307509_10221053 3300031507 Bacteria 1707
122 Ga0316575_10009428 3300031665 Bacteria 3575
123 Ga0316579_10018041 3300031691 Bacteria 3101
124 Ga0265314_10084981 3300031711 Bacteria 2076
125 Ga0265342_10029505 3300031712 Bacteria 3405
126 Ga0265342_10232931 3300031712 Bacteria 988
127 Ga0265342_10293314 3300031712 Bacteria 858
128 Ga0316576_10439868 3300031727 Bacteria 964
129 Ga0316578_10195987 3300031728 Bacteria 1216
130 Ga0307405_10004188 3300031731 Bacteria 6789
131 Ga0316577_10054147 3300031733 Bacteria 2239
132 Ga0307413_10747286 3300031824 Bacteria 817
133 Ga0307414_10107695 3300032004 Bacteria 2112
134 Ga0316585_10108408 3300032137 Bacteria 912
135 Ga0316580_10023925 3300032139 Bacteria 1888
136 Ga0373923_0021989 3300035111 Bacteria 2496
137 Ga0373923_0029224 3300035111 Bacteria 2209
138 Ga0373936_0004678 3300035113 Bacteria 5179
139 Ga0373936_0062740 3300035113 Bacteria 1520
140 Ga0373945_0112033 3300035116 Bacteria 1077
141 Ga0373953_0003189 3300035117 Bacteria 5076
142 Ga0373954_0000173 3300035118 Bacteria 23103
143 Ga0373956_0020142 3300035119 Bacteria 2835
144 Ga0373956_0026415 3300035119 Bacteria 2515
145 Ga0373957_0009207 3300035120 Bacteria 3224
146 Ga0373943_0051924 3300035170 Bacteria 2020
147 Ga0373946_0008116 3300035171 Bacteria 3855
148 Ga0373955_0002502 3300035172 Bacteria 8027
149 Ga0316574_0085265 3300035398 Bacteria 2010
150 Ga0316574_0104441 3300035398 Bacteria 1814
151 Ga0316574_0357618 3300035398 Bacteria 923
152 Ga0373935_0000120 3300035692 Bacteria 35369
153 Ga0373927_0001893 3300035695 Bacteria 15455
154 Ga0373933_0003524 3300035724 Bacteria 8711
155 Ga0373947_0001585 3300035725 Bacteria 13942
156 Ga0373937_0014495 3300036401 Bacteria 6960
157 Ga0373937_0051854 3300036401 Bacteria 3760
158 Ga0316582_0011238 3300036647 Bacteria 4942
159 Ga0316582_0058158 3300036647 Bacteria 2471
160 Ga0316584_0126751 3300036712 Bacteria 1906
161 Ga0373925_0034500 3300037068 Bacteria 3729
162 Ga0436365_0010969 3300039437 Bacteria 175809
163 Ga0451791_0729445 3300041451 Bacteria 675
164 Ga0439448_0000858 3300042005 Bacteria 7416
165 Ga0439450_002024 3300042008 Bacteria 3108
166 Ga0439455_0042769 3300042012 Bacteria 1164
167 Ga0450903_004156 3300042138 Bacteria 2480
168 Ga0439458_0007662 3300042157 Bacteria 2404
169 Ga0451577_0011397 3300042876 Bacteria 8413
170 Ga0453684_0002293 3300044712 Bacteria 47018
171 Ga0451576_0000165 3300045051 Bacteria 168085
172 Ga0495592_0003510 3300046454 Bacteria 11250
173 Ga0495592_0082352 3300046454 Bacteria 2326
174 Ga0495603_0000096 3300046455 Bacteria 40566
175 Ga0495603_0008929 3300046455 Bacteria 6061
176 Ga0495629_0000198 3300046459 Bacteria 53334
177 Ga0495629_0003922 3300046459 Bacteria 11194
178 Ga0495641_0002099 3300046461 Bacteria 16113
179 Ga0495653_0009708 3300046463 Bacteria 7869
180 Ga0495650_0126509 3300046471 Bacteria 936
181 Ga0495580_0021251 3300046472 Bacteria 4790
182 Ga0495582_0000021 3300046473 Bacteria 88264
183 Ga0495639_0000030 3300046475 Bacteria 65832
184 Ga0495662_0000244 3300046476 Bacteria 23050
185 Ga0495594_0002317 3300046499 Bacteria 9912
186 Ga0495608_0003490 3300046511 Bacteria 11267
187 Ga0495608_0187708 3300046511 Bacteria 1306
188 Ga0495608_0605939 3300046511 Bacteria 657
189 Ga0495618_0348254 3300046514 Bacteria 913
190 Ga0495628_0021196 3300046516 Bacteria 5350
191 Ga0495628_0136389 3300046516 Bacteria 1875
192 Ga0495630_0001526 3300046517 Bacteria 16047
193 Ga0495648_0000325 3300046524 Bacteria 52966
194 Ga0495666_0005886 3300046526 Bacteria 6177
195 Ga0495652_0042444 3300046529 Bacteria 3921
196 Ga0495652_0115315 3300046529 Bacteria 2153
197 Ga0495652_0160475 3300046529 Bacteria 1746
198 Ga0495665_0000066 3300046531 Bacteria 43565
199 Ga0495640_0013018 3300046533 Bacteria 6336
200 Ga0495640_0014661 3300046533 Bacteria 5920
201 Ga0495586_0171259 3300046535 Bacteria 1227
202 Ga0495587_0002078 3300046536 Bacteria 13380
203 Ga0495645_0019505 3300046543 Bacteria 4881
204 Ga0495645_0142132 3300046543 Bacteria 1674
205 Ga0495622_0000546 3300046557 Bacteria 22592
206 Ga0495667_0008401 3300046559 Bacteria 7005
207 Ga0495634_0000336 3300046642 Bacteria 45375
208 Ga0495634_0051007 3300046642 Bacteria 2777
209 Ga0495635_0000235 3300046663 Bacteria 35104
210 Ga0495635_0002644 3300046663 Bacteria 12249
211 Ga0495588_0003747 3300046674 Bacteria 6646
212 Ga0495657_0003518 3300046675 Bacteria 12768
213 Ga0495599_0022950 3300046678 Bacteria 3897
214 Ga0495599_0145665 3300046678 Bacteria 1468
215 Ga0495599_0464239 3300046678 Bacteria 748
216 Ga0495623_0009410 3300046679 Bacteria 6342
217 Ga0495623_0209718 3300046679 Bacteria 1116
218 Ga0495646_0004023 3300046680 Bacteria 9211
219 Ga0495646_0023858 3300046680 Bacteria 3850
220 Ga0495647_0089595 3300046681 Bacteria 1260
221 Ga0495658_0000821 3300046683 Bacteria 16654
222 Ga0495613_0000240 3300046689 Bacteria 51775
223 Ga0495613_0001708 3300046689 Bacteria 16723
224 Ga0495613_0026582 3300046689 Bacteria 4311
225 Ga0495624_0000951 3300046690 Bacteria 22822
226 Ga0495600_0002826 3300046809 Bacteria 10100
227 Ga0495600_0118765 3300046809 Bacteria 1720
228 Ga0495581_0000218 3300047315 Bacteria 26987
229 Ga0495604_0002120 3300047317 Bacteria 15968
230 Ga0495674_0000101 3300047319 Bacteria 62646
231 Ga0495672_0114038 3300047320 Bacteria 1447
232 Ga0495672_0115712 3300047320 Bacteria 1432
233 Ga0495676_0010026 3300047321 Bacteria 8607
234 Ga0495680_0041068 3300047322 Bacteria 3679
235 Ga0495680_0457589 3300047322 Bacteria 872
236 Ga0495684_0000208 3300047471 Bacteria 45416
237 Ga0495593_0000256 3300047673 Bacteria 28686
238 Ga0495593_0018269 3300047673 Bacteria 3942
239 Ga0495602_0574962 3300048088 Bacteria 778
240 Ga0495614_0104862 3300048089 Bacteria 1238
241 Ga0495615_0000003 3300048090 Bacteria 127902
242 Ga0496100_0059687 3300048903 Bacteria 2507
243 Ga0496101_0136065 3300048904 Bacteria 1869
244 Ga0496102_0000143 3300048905 Bacteria 96813
245 Ga0496102_0116912 3300048905 Bacteria 2489
246 Ga0496102_0424102 3300048905 Bacteria 1249
247 Ga0496103_0000098 3300048906 Bacteria 96109
248 Ga0496103_0354338 3300048906 Bacteria 943
249 Ga0496104_0011887 3300048907 Bacteria 7813
250 Ga0496104_0017216 3300048907 Bacteria 6576
251 Ga0496105_0001678 3300048908 Bacteria 15793
252 Ga0496106_0000127 3300048909 Bacteria 58281
253 Ga0496106_0001761 3300048909 Bacteria 16160
254 Ga0496106_0343186 3300048909 Bacteria 1199
255 Ga0496107_0000530 3300048910 Bacteria 21244
256 Ga0496107_0009836 3300048910 Bacteria 6632
257 Ga0496107_0077468 3300048910 Bacteria 2422
258 Ga0496108_0008737 3300048911 Bacteria 8214
259 Ga0496108_0170586 3300048911 Archaea 1882
260 Ga0496109_0004376 3300048912 Bacteria 11800
261 Ga0496110_0115657 3300048913 Bacteria 2414
262 Ga0496110_0122358 3300048913 Bacteria 2345
263 Ga0496111_0034693 3300048914 Bacteria 3603
264 Ga0496111_0083637 3300048914 Bacteria 2332
265 Ga0496112_0009488 3300048915 Bacteria 8774
266 Ga0496113_0000269 3300048916 Bacteria 24502
267 Ga0496115_0107076 3300048918 Bacteria 2295
268 Ga0496115_0431340 3300048918 Bacteria 1067
269 Ga0496116_0071712 3300048919 Bacteria 2192
270 Ga0496117_0000121 3300048920 Bacteria 171532
271 Ga0496118_0000095 3300048921 Bacteria 164850
272 Ga0496119_0006851 3300048922 Bacteria 10428
273 Ga0496119_0012070 3300048922 Bacteria 7060
274 Ga0496120_0185933 3300048923 Bacteria 1016
275 Ga0496121_0000194 3300048924 Bacteria 136324
276 Ga0496122_0006933 3300048925 Bacteria 12786
277 Ga0496122_0037524 3300048925 Bacteria 3898
278 Ga0496123_0003427 3300048926 Bacteria 17814
279 Ga0496124_0000119 3300048927 Bacteria 163996
280 Ga0496124_0034001 3300048927 Bacteria 4479
281 Ga0496124_0112747 3300048927 Bacteria 2186
282 Ga0496125_0020909 3300048928 Bacteria 6123
283 Ga0496126_0009002 3300048929 Bacteria 10682
284 Ga0496126_0013237 3300048929 Bacteria 8411
285 Ga0496126_0036237 3300048929 Bacteria 4614
286 Ga0501047_0231092 3300049581 Bacteria 1703
287 Ga0501249_000497 3300049679 Bacteria 9689
288 Ga0501204_000249 3300049850 Bacteria 4420
289 nmdc:mga05p37_114336_c1 3300050507 Bacteria 3318
290 nmdc:mga08y16_97086_c1 3300050511 Bacteria 3068
291 Ga0495601_0295132 3300053077 Bacteria 1056
292 Ga0500635_0029381 3300053080 Bacteria 1764
293 Ga0495595_0104694 3300053084 Bacteria 1368
294 Ga0495619_0000329 3300053085 Bacteria 33188
295 Ga0495619_0123331 3300053085 Bacteria 1777
296 Ga0500554_000966 3300053102 Bacteria 5589
297 Ga0500618_004882 3300053125 Bacteria 4175
298 Ga0500573_0029131 3300053140 Bacteria 3182
299 Ga0500573_0095712 3300053140 Bacteria 1674
300 Ga0500603_001249 3300053150 Bacteria 5898
301 Ga0500603_052315 3300053150 Bacteria 1121
302 Ga0500636_0222918 3300053177 Bacteria 981
303 Ga0500637_0000143 3300053178 Bacteria 26106
304 2513870074 2513237138 Bacteria 7368160
305 2786672587 2786546132 Bacteria 10419719
306 2848298773 2848297114 Bacteria 3608511
307 2862296104 2862290372 Bacteria 7471434
308 2882807053 2882806704 Bacteria 3007728
309 2895888325 2895880812 Bacteria 11255272
310 2896254711 2896253425 Bacteria 3418029
311 2954678862 2954673503 Bacteria 9685905
312 2954685290 2954682443 Bacteria 9862841
313 Ga0068856_100001981
314 JGI24751J29686_10000823
315 Ga0070690_100074151
316 Ga0070670_100000672
317 Ga0070670_100116966
318 Ga0068869_100017610
319 Ga0070666_10078072
320 Ga0070689_100070372
321 Ga0070692_10006173
322 Ga0070668_100000045
323 Ga0070668_100001696
324 Ga0070669_100016832
325 Ga0070671_100000039
326 Ga0070671_100035096
327 Ga0070671_100063288
328 Ga0070667_100000104
329 Ga0070667_100013060
330 Ga0070663_100257625
331 Ga0070678_100070389
332 Ga0070698_100309705
333 Ga0068853_100203332
334 Ga0070686_100053556
335 Ga0070665_100062394
336 Ga0070665_100156700
337 Ga0068855_100379645
338 Ga0068857_100008398
339 Ga0068856_100366129
340 Ga0068852_100036107
341 Ga0068852_100052668
342 Ga0068859_100071686
343 Ga0068861_100003402
344 Ga0068851_10005392
345 Ga0068863_100032610
346 Ga0068863_100079326
347 Ga0068858_100013289
348 Ga0068860_100000197
349 Ga0068860_100081345
350 Ga0068860_100122571
351 Ga0068862_100000031
352 Ga0068862_100009962
353 Ga0068862_100038157
354 Ga0068862_100158326
355 Ga0068862_100530609
356 Ga0075365_10146568
357 Ga0068871_100668126
358 Ga0075429_100043719
359 Ga0097620_100071686
360 Ga0099794_10002631
361 Ga0099794_10054625
362 Ga0099795_10029084
363 Ga0099795_10140569
364 Ga0105240_10034660
365 Ga0105240_10047946
366 Ga0105240_10520373
367 Ga0111539_10552892
368 Ga0114129_10015758
369 Ga0105248_10648286
370 Ga0105237_10016297
371 Ga0105238_10002194
372 Ga0105249_10267218
373 Ga0099796_10142247
374 Ga0105239_10471550
375 Ga0157371_10040833
376 Ga0157369_10002885
377 Ga0157374_10481657
378 Ga0163162_10046843
379 Ga0213876_10000120
380 Ga0207656_10004606
381 Ga0207680_10010251
382 Ga0207695_10186861
383 Ga0207660_10142053
384 Ga0207657_10002721
385 Ga0207681_10008811
386 Ga0207650_10000867
387 Ga0207650_10339277
388 Ga0207644_10000022
389 Ga0207644_10001501
390 Ga0207644_10022821
391 Ga0207689_10047149
392 Ga0207661_10033813
393 Ga0207667_10006192
394 Ga0207712_10168528
395 Ga0207668_10000103
396 Ga0207668_10001303
397 Ga0207668_10272895
398 Ga0207658_10001305
399 Ga0207658_10002143
400 Ga0207703_10000689
401 Ga0207639_10124790
402 Ga0207678_10126450
403 Ga0207678_10354098
404 Ga0207702_10000640
405 Ga0207641_10000207
406 Ga0207641_10002760
407 Ga0207641_10005771
408 Ga0207641_10030394
409 Ga0207674_10005746
410 Ga0207674_10012569
411 Ga0207683_10206839
412 Ga0207698_10031667
413 Ga0207698_10231556
414 Ga0209588_1003960
415 Ga0209588_1009252
416 Ga0209974_10013038
417 Ga0268265_10001219
418 Ga0268265_10006159
419 Ga0268265_10008474
420 Ga0268265_10944351
421 Ga0268264_10000190
422 Ga0268264_10000534
423 Ga0268264_10090803
424 Ga0265334_10037345
425 Ga0265332_10035856
426 Ga0265332_10039602
427 Ga0265328_10047836
428 Ga0265325_10010768
429 Ga0265339_10062526
430 Ga0265331_10081072
431 Ga0265316_10054339
432 Ga0265316_10109575
433 Ga0307509_10221053
434 Ga0316575_10009428
435 Ga0316579_10018041
436 Ga0265314_10084981
437 Ga0265342_10029505
438 Ga0265342_10232931
439 Ga0265342_10293314
440 Ga0316576_10439868
441 Ga0316578_10195987
442 Ga0307405_10004188
443 Ga0316577_10054147
444 Ga0307413_10747286
445 Ga0307414_10107695
446 Ga0316585_10108408
447 Ga0316580_10023925
448 Ga0373923_0021989
449 Ga0373923_0029224
450 Ga0373936_0004678
451 Ga0373936_0062740
452 Ga0373945_0112033
453 Ga0373953_0003189
454 Ga0373954_0000173
455 Ga0373956_0020142
456 Ga0373956_0026415
457 Ga0373957_0009207
458 Ga0373943_0051924
459 Ga0373946_0008116
460 Ga0373955_0002502
461 Ga0316574_0085265
462 Ga0316574_0104441
463 Ga0316574_0357618
464 Ga0373935_0000120
465 Ga0373927_0001893
466 Ga0373933_0003524
467 Ga0373947_0001585
468 Ga0373937_0014495
469 Ga0373937_0051854
470 Ga0316582_0011238
471 Ga0316582_0058158
472 Ga0316584_0126751
473 Ga0373925_0034500
474 Ga0436365_0010969
475 Ga0451791_0729445
476 Ga0439448_0000858
477 Ga0439450_002024
478 Ga0439455_0042769
479 Ga0450903_004156
480 Ga0439458_0007662
481 Ga0451577_0011397
482 Ga0453684_0002293
483 Ga0451576_0000165
484 Ga0495592_0003510
485 Ga0495592_0082352
486 Ga0495603_0000096
487 Ga0495603_0008929
488 Ga0495629_0000198
489 Ga0495629_0003922
490 Ga0495641_0002099
491 Ga0495653_0009708
492 Ga0495650_0126509
493 Ga0495580_0021251
494 Ga0495582_0000021
495 Ga0495639_0000030
496 Ga0495662_0000244
497 Ga0495594_0002317
498 Ga0495608_0003490
499 Ga0495608_0187708
500 Ga0495608_0605939
501 Ga0495618_0348254
502 Ga0495628_0021196
503 Ga0495628_0136389
504 Ga0495630_0001526
505 Ga0495648_0000325
506 Ga0495666_0005886
507 Ga0495652_0042444
508 Ga0495652_0115315
509 Ga0495652_0160475
510 Ga0495665_0000066
511 Ga0495640_0013018
512 Ga0495640_0014661
513 Ga0495586_0171259
514 Ga0495587_0002078
515 Ga0495645_0019505
516 Ga0495645_0142132
517 Ga0495622_0000546
518 Ga0495667_0008401
519 Ga0495634_0000336
520 Ga0495634_0051007
521 Ga0495635_0000235
522 Ga0495635_0002644
523 Ga0495588_0003747
524 Ga0495657_0003518
525 Ga0495599_0022950
526 Ga0495599_0145665
527 Ga0495599_0464239
528 Ga0495623_0009410
529 Ga0495623_0209718
530 Ga0495646_0004023
531 Ga0495646_0023858
532 Ga0495647_0089595
533 Ga0495658_0000821
534 Ga0495613_0000240
535 Ga0495613_0001708
536 Ga0495613_0026582
537 Ga0495624_0000951
538 Ga0495600_0002826
539 Ga0495600_0118765
540 Ga0495581_0000218
541 Ga0495604_0002120
542 Ga0495674_0000101
543 Ga0495672_0114038
544 Ga0495672_0115712
545 Ga0495676_0010026
546 Ga0495680_0041068
547 Ga0495680_0457589
548 Ga0495684_0000208
549 Ga0495593_0000256
550 Ga0495593_0018269
551 Ga0495602_0574962
552 Ga0495614_0104862
553 Ga0495615_0000003
554 Ga0496100_0059687
555 Ga0496101_0136065
556 Ga0496102_0000143
557 Ga0496102_0116912
558 Ga0496102_0424102
559 Ga0496103_0000098
560 Ga0496103_0354338
561 Ga0496104_0011887
562 Ga0496104_0017216
563 Ga0496105_0001678
564 Ga0496106_0000127
565 Ga0496106_0001761
566 Ga0496106_0343186
567 Ga0496107_0000530
568 Ga0496107_0009836
569 Ga0496107_0077468
570 Ga0496108_0008737
571 Ga0496108_0170586
572 Ga0496109_0004376
573 Ga0496110_0115657
574 Ga0496110_0122358
575 Ga0496111_0034693
576 Ga0496111_0083637
577 Ga0496112_0009488
578 Ga0496113_0000269
579 Ga0496115_0107076
580 Ga0496115_0431340
581 Ga0496116_0071712
582 Ga0496117_0000121
583 Ga0496118_0000095
584 Ga0496119_0006851
585 Ga0496119_0012070
586 Ga0496120_0185933
587 Ga0496121_0000194
588 Ga0496122_0006933
589 Ga0496122_0037524
590 Ga0496123_0003427
591 Ga0496124_0000119
592 Ga0496124_0034001
593 Ga0496124_0112747
594 Ga0496125_0020909
595 Ga0496126_0009002
596 Ga0496126_0013237
597 Ga0496126_0036237
598 Ga0501047_0231092
599 Ga0501249_000497
600 Ga0501204_000249
601 nmdc:mga05p37_114336_c1
602 nmdc:mga08y16_97086_c1
603 Ga0495601_0295132
604 Ga0500635_0029381
605 Ga0495595_0104694
606 Ga0495619_0000329
607 Ga0495619_0123331
608 Ga0500554_000966
609 Ga0500618_004882
610 Ga0500573_0029131
611 Ga0500573_0095712
612 Ga0500603_001249
613 Ga0500603_052315
614 Ga0500636_0222918
615 Ga0500637_0000143
616 2513870074
617 2786672587
618 2848298773
619 2862296104
620 2882807053
621 2895888325
622 2896254711
623 2954678862
624 2954685290

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01564

Spermine_synth

Spermine/spermidine synthase domain

45

203

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o4f-assembly4.cif.gz_H crystal structure of spermidine synthase from e. coli 0.8284 10 203
4yv2-assembly1.cif.gz_B crystal structure of trypanosoma cruzi spermidine synthase in complex with 2-phenyl-1,2-thiazol-3(2h)-one 0.8254 10 206
1jq3-assembly1.cif.gz_B crystal structure of spermidine synthase in complex with transition state analogue adodato 0.8234 10 206
1xj5-assembly1.cif.gz_C x-ray structure of spermidine synthase from arabidopsis thaliana gene at1g23820 0.8224 10 206
4yv0-assembly2.cif.gz_D crystal structure of trypanosoma cruzi spermidine synthase in complex with (2s)-n-methyl-n-phenyl-2,3-dihydro-1,4-benzodioxine- 2-carboxamid 0.821 10 205
ID Description Score Start End Superfamily
af_I1JZX5_64_282_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8295 25 206 3.40.50.150
af_Q57761_62_290_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8217 28 206 3.40.50.150
1iy9C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8163 26 206 3.40.50.150
af_Q9S7X6_87_338_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.803 28 206 3.40.50.150
af_Q4CXJ6_69_296_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8028 25 205 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A7W7AD70-F1-model_v4 Spermidine synthase 0.988 4 205 GO:0006596
AF-Q07MA5-F1-model_v4 Spermidine synthase 0.9873 2 206 GO:0006596
AF-A0A7W8HNZ8-F1-model_v4 Spermidine synthase 0.987 2 205 GO:0006596
AF-A0A4V3H0M6-F1-model_v4 Spermidine synthase 0.9869 2 205 GO:0006596
AF-A0A286ID00-F1-model_v4 Spermine/spermidine synthase 0.9864 3 205 GO:0006596

Map