F401563

General Info

Members Datasets Scaffolds Average Seq Length
312 191 624 181

Family's Representative Sequence

Representative Sequence 3300005353|Ga0070669_100043148|Ga0070669_1000431483
Length 200
Sequence MKNVTAGTTKTRKARRNTKKSLFSSCTFAAFVLSWSLVVPLTGQPPGPIIVVETSKGTFEFETYPADAPKTVSHVVALVKRGFYDGQRVHRALPGFLVQWGDPRSRDTAREDDWGRGPEASSGTAIGAAEISRKHLHGRGAVAMAHPGVPGEADSQIYVTLADRPGLNGKYTVFGQVIAGDEVPARLERGDVIRKMSVKE

Samples

Sample ID Description Type Environment
1 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
111 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
112 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
113 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
114 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
115 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
116 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
117 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
118 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
119 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
120 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
121 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
122 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
128 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
134 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
137 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
138 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
173 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
185 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
186 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
187 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
188 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
189 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.6
Nodule 0
Rhizoplane 3.53
Rhizosphere 94.55
Stem 0
Stem Tuber 0
Unclassified 13.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070669_100043148 3300005353 Bacteria 3283
2 Ga0065715_10144670 3300005293 Bacteria 1803
3 Ga0065707_10187162 3300005295 Bacteria 1382
4 Ga0070676_10336360 3300005328 Bacteria 1034
5 Ga0070677_10057139 3300005333 Bacteria 1598
6 Ga0070666_10145953 3300005335 Bacteria 1649
7 Ga0070680_100071595 3300005336 Bacteria 2849
8 Ga0068868_100035858 3300005338 Bacteria 3836
9 Ga0068868_100244266 3300005338 Bacteria 1509
10 Ga0070691_10002667 3300005341 Bacteria 7952
11 Ga0070669_100019461 3300005353 Bacteria 4849
12 Ga0070669_100177161 3300005353 Bacteria 1666
13 Ga0070671_100075868 3300005355 Bacteria 2809
14 Ga0070674_100003729 3300005356 Bacteria 8591
15 Ga0070674_100046942 3300005356 Bacteria 2957
16 Ga0070673_100015038 3300005364 Bacteria 5417
17 Ga0070709_10265387 3300005434 Bacteria 1242
18 Ga0070701_10006295 3300005438 Bacteria 4985
19 Ga0070705_100006282 3300005440 Bacteria 5821
20 Ga0070700_100004171 3300005441 Bacteria 7535
21 Ga0070700_100004954 3300005441 Bacteria 7006
22 Ga0070694_100010375 3300005444 Bacteria 5745
23 Ga0070694_100485918 3300005444 Bacteria 980
24 Ga0070678_100086365 3300005456 Bacteria 2393
25 Ga0070662_100082189 3300005457 Bacteria 2402
26 Ga0068867_100002675 3300005459 Bacteria 12567
27 Ga0068867_100005839 3300005459 Bacteria 8731
28 Ga0068867_100285850 3300005459 Bacteria 1354
29 Ga0068867_100410714 3300005459 Bacteria 1144
30 Ga0070697_100704720 3300005536 Bacteria 891
31 Ga0070672_100240949 3300005543 Bacteria 1521
32 Ga0070672_100380887 3300005543 Bacteria 1207
33 Ga0070686_100124986 3300005544 Bacteria 1771
34 Ga0070686_100133645 3300005544 Unclassified 1719
35 Ga0070695_100003718 3300005545 Bacteria 8895
36 Ga0070695_100041484 3300005545 Bacteria 2917
37 Ga0070695_100336370 3300005545 Unclassified 1127
38 Ga0070695_100405140 3300005545 Bacteria 1035
39 Ga0070695_100472619 3300005545 Bacteria 965
40 Ga0070696_100011890 3300005546 Bacteria 5834
41 Ga0070696_100028865 3300005546 Bacteria 3787
42 Ga0070696_100690882 3300005546 Bacteria 831
43 Ga0070693_100902795 3300005547 Bacteria 662
44 Ga0070665_100003124 3300005548 Bacteria 17837
45 Ga0070704_100000652 3300005549 Bacteria 16748
46 Ga0070704_100149404 3300005549 Bacteria 1835
47 Ga0070704_100261111 3300005549 Bacteria 1427
48 Ga0070704_100395352 3300005549 Bacteria 1178
49 Ga0068857_100350443 3300005577 Bacteria 1367
50 Ga0068854_100018723 3300005578 Bacteria 4654
51 Ga0068854_100541781 3300005578 Unclassified 986
52 Ga0068854_100700967 3300005578 Bacteria 874
53 Ga0070702_100002183 3300005615 Bacteria 8337
54 Ga0068852_100292051 3300005616 Bacteria 1575
55 Ga0068859_100065854 3300005617 Unclassified 3657
56 Ga0068859_100325468 3300005617 Unclassified 1631
57 Ga0068859_101462887 3300005617 Bacteria 754
58 Ga0068864_100091780 3300005618 Bacteria 2680
59 Ga0068866_10047548 3300005718 Bacteria 2164
60 Ga0068861_100005416 3300005719 Bacteria 8639
61 Ga0068861_100017363 3300005719 Bacteria 5107
62 Ga0068851_10033498 3300005834 Bacteria 2561
63 Ga0068870_10349664 3300005840 Bacteria 948
64 Ga0068863_100157498 3300005841 Bacteria 2175
65 Ga0068863_100272683 3300005841 Unclassified 1638
66 Ga0068858_100016550 3300005842 Bacteria 6925
67 Ga0068858_100110170 3300005842 Bacteria 2571
68 Ga0068858_100126799 3300005842 Bacteria 2391
69 Ga0068858_100269184 3300005842 Bacteria 1621
70 Ga0068860_100530190 3300005843 Bacteria 1178
71 Ga0068860_101103550 3300005843 Unclassified 813
72 Ga0068862_100112106 3300005844 Bacteria 2395
73 Ga0068862_100926203 3300005844 Bacteria 858
74 Ga0068862_100946174 3300005844 Bacteria 849
75 Ga0097621_100151942 3300006237 Bacteria 1986
76 Ga0097621_100710410 3300006237 Unclassified 926
77 Ga0068871_100010328 3300006358 Bacteria 6806
78 Ga0068871_100012694 3300006358 Bacteria 6225
79 Ga0068871_100090270 3300006358 Bacteria 2552
80 Ga0075428_100719468 3300006844 Unclassified 1063
81 Ga0075428_101736392 3300006844 Bacteria 651
82 Ga0075433_10040826 3300006852 Bacteria 4018
83 Ga0075434_100231511 3300006871 Bacteria 1867
84 Ga0075429_100619945 3300006880 Bacteria 948
85 Ga0068865_100053472 3300006881 Bacteria 2802
86 Ga0068865_100146746 3300006881 Bacteria 1785
87 Ga0097620_100065850 3300006931 Unclassified 3657
88 Ga0097620_100325465 3300006931 Unclassified 1631
89 Ga0097620_101462633 3300006931 Bacteria 754
90 Ga0075435_100018007 3300007076 Bacteria 5358
91 Ga0075435_100061292 3300007076 Bacteria 3052
92 Ga0075435_100190392 3300007076 Bacteria 1736
93 Ga0105240_10076802 3300009093 Bacteria 4117
94 Ga0105240_10170943 3300009093 Bacteria 2574
95 Ga0111539_10004769 3300009094 Bacteria 17699
96 Ga0111539_10229360 3300009094 Bacteria 2162
97 Ga0111539_10245597 3300009094 Bacteria 2084
98 Ga0111539_10419255 3300009094 Bacteria 1559
99 Ga0111539_10599072 3300009094 Unclassified 1283
100 Ga0105245_10053840 3300009098 Bacteria 3613
101 Ga0105245_10456973 3300009098 Bacteria 1287
102 Ga0105245_10574027 3300009098 Unclassified 1152
103 Ga0105247_10010076 3300009101 Bacteria 5726
104 Ga0105247_10010295 3300009101 Bacteria 5659
105 Ga0114129_10084220 3300009147 Bacteria 4415
106 Ga0114129_11514779 3300009147 Bacteria 824
107 Ga0105243_10007657 3300009148 Bacteria 8299
108 Ga0105243_10741063 3300009148 Bacteria 962
109 Ga0105242_10018797 3300009176 Bacteria 5408
110 Ga0105242_10024473 3300009176 Bacteria 4769
111 Ga0105242_10027323 3300009176 Bacteria 4529
112 Ga0105248_10056753 3300009177 Bacteria 4393
113 Ga0105248_10097296 3300009177 Bacteria 3316
114 Ga0105248_10989890 3300009177 Bacteria 950
115 Ga0105237_10178065 3300009545 Bacteria 2127
116 Ga0105238_10427316 3300009551 Bacteria 1320
117 Ga0105249_10289897 3300009553 Bacteria 1638
118 Ga0105249_10653284 3300009553 Bacteria 1109
119 Ga0105249_10753620 3300009553 Bacteria 1036
120 Ga0157374_10005941 3300013296 Bacteria 10317
121 Ga0163162_10100171 3300013306 Bacteria 2989
122 Ga0163162_10781279 3300013306 Bacteria 1073
123 Ga0157375_10115922 3300013308 Bacteria 2782
124 Ga0163163_10135000 3300014325 Unclassified 2508
125 Ga0163163_10818464 3300014325 Bacteria 995
126 Ga0157380_10010138 3300014326 Bacteria 6772
127 Ga0157380_10029391 3300014326 Bacteria 4201
128 Ga0157380_10057059 3300014326 Bacteria 3108
129 Ga0157380_10093754 3300014326 Bacteria 2483
130 Ga0157380_10816841 3300014326 Bacteria 951
131 Ga0157379_10004956 3300014968 Bacteria 11421
132 Ga0157379_10133045 3300014968 Unclassified 2239
133 Ga0157376_10020942 3300014969 Bacteria 5069
134 Ga0157376_10061374 3300014969 Bacteria 3160
135 Ga0163161_10217077 3300017792 Bacteria 1480
136 Ga0207653_10044262 3300025885 Bacteria 1467
137 Ga0207642_10055406 3300025899 Bacteria 1813
138 Ga0207710_10003937 3300025900 Bacteria 6552
139 Ga0207710_10061951 3300025900 Bacteria 1699
140 Ga0207645_10000374 3300025907 Bacteria 37092
141 Ga0207645_10090640 3300025907 Bacteria 1966
142 Ga0207645_10537931 3300025907 Bacteria 792
143 Ga0207671_10119859 3300025914 Bacteria 2010
144 Ga0207681_10020546 3300025923 Bacteria 4186
145 Ga0207681_10026763 3300025923 Bacteria 3723
146 Ga0207694_10107841 3300025924 Bacteria 2213
147 Ga0207659_10120522 3300025926 Bacteria 2010
148 Ga0207687_10027726 3300025927 Bacteria 3802
149 Ga0207687_10602424 3300025927 Unclassified 926
150 Ga0207644_10156429 3300025931 Bacteria 1768
151 Ga0207686_10265021 3300025934 Bacteria 1261
152 Ga0207709_10565011 3300025935 Unclassified 896
153 Ga0207704_10027474 3300025938 Bacteria 3141
154 Ga0207704_10109603 3300025938 Bacteria 1863
155 Ga0207704_10130804 3300025938 Bacteria 1737
156 Ga0207691_10198065 3300025940 Bacteria 1749
157 Ga0207711_10017730 3300025941 Bacteria 5916
158 Ga0207711_10096979 3300025941 Bacteria 2603
159 Ga0207711_10533889 3300025941 Bacteria 1094
160 Ga0207651_10143499 3300025960 Bacteria 1848
161 Ga0207712_10620922 3300025961 Bacteria 937
162 Ga0207668_10289265 3300025972 Bacteria 1347
163 Ga0207640_10041106 3300025981 Bacteria 2938
164 Ga0207658_10070197 3300025986 Bacteria 2650
165 Ga0207677_10026074 3300026023 Bacteria 3660
166 Ga0207677_10285157 3300026023 Unclassified 1357
167 Ga0207703_10008895 3300026035 Bacteria 7911
168 Ga0207703_10014697 3300026035 Bacteria 6109
169 Ga0207703_10015685 3300026035 Bacteria 5909
170 Ga0207703_10053921 3300026035 Bacteria 3269
171 Ga0207708_10000853 3300026075 Bacteria 22965
172 Ga0207708_10004792 3300026075 Bacteria 9964
173 Ga0207708_10135649 3300026075 Bacteria 1927
174 Ga0207708_10722343 3300026075 Bacteria 853
175 Ga0207641_10960475 3300026088 Unclassified 850
176 Ga0207648_10022113 3300026089 Bacteria 5713
177 Ga0207648_10027133 3300026089 Bacteria 5086
178 Ga0207648_10282932 3300026089 Unclassified 1483
179 Ga0207648_10397853 3300026089 Bacteria 1248
180 Ga0207676_10063848 3300026095 Bacteria 2926
181 Ga0207676_10381526 3300026095 Bacteria 1312
182 Ga0207675_100068931 3300026118 Bacteria 3306
183 Ga0207675_100115102 3300026118 Bacteria 2541
184 Ga0207675_100152603 3300026118 Bacteria 2199
185 Ga0207683_10070961 3300026121 Bacteria 3078
186 Ga0207683_10144585 3300026121 Bacteria 2144
187 Ga0207428_10005145 3300027907 Bacteria 12252
188 Ga0207428_10063531 3300027907 Bacteria 2916
189 Ga0268266_10038995 3300028379 Bacteria 4045
190 Ga0268265_10062442 3300028380 Bacteria 2862
191 Ga0268265_10564510 3300028380 Bacteria 1082
192 Ga0268265_11123174 3300028380 Unclassified 781
193 Ga0268264_10059408 3300028381 Bacteria 3204
194 Ga0268264_10187094 3300028381 Unclassified 1885
195 Ga0268264_10762331 3300028381 Bacteria 965
196 Ga0307408_101041145 3300031548 Bacteria 756
197 Ga0307413_10107725 3300031824 Bacteria 1858
198 Ga0307413_10186524 3300031824 Bacteria 1485
199 Ga0307410_10025311 3300031852 Bacteria 3722
200 Ga0307410_10094960 3300031852 Bacteria 2125
201 Ga0307410_10767980 3300031852 Unclassified 817
202 Ga0307409_100008321 3300031995 Bacteria 6288
203 Ga0307409_100080884 3300031995 Unclassified 2624
204 Ga0307409_100561845 3300031995 Bacteria 1122
205 Ga0307416_100132969 3300032002 Unclassified 2244
206 Ga0307416_100628678 3300032002 Bacteria 1156
207 Ga0307416_101103407 3300032002 Bacteria 898
208 Ga0307414_10023492 3300032004 Bacteria 3912
209 Ga0307411_10336849 3300032005 Bacteria 1224
210 Ga0373930_0011405 3300034816 Bacteria 1604
211 Ga0373948_0010986 3300034817 Bacteria 1591
212 Ga0373958_0044327 3300034819 Bacteria 920
213 Ga0373938_0008855 3300034957 Bacteria 1807
214 Ga0373940_0000155 3300035088 Bacteria 8962
215 Ga0373949_0001888 3300035090 Bacteria 5677
216 Ga0373951_0003635 3300035091 Bacteria 3719
217 Ga0373952_0009163 3300035092 Bacteria 1889
218 Ga0373932_0001748 3300035112 Bacteria 5880
219 Ga0373939_0001913 3300035114 Bacteria 4982
220 Ga0373941_0011708 3300035115 Bacteria 2273
221 Ga0373942_0014847 3300035207 Bacteria 1890
222 Ga0373961_0000790 3300035241 Bacteria 10874
223 Ga0373931_0009981 3300035691 Bacteria 4552
224 Ga0373933_0084200 3300035724 Unclassified 1954
225 Ga0373937_0104148 3300036401 Bacteria 2636
226 Ga0373937_1352674 3300036401 Bacteria 660
227 Ga0395901_1371623 3300038443 Bacteria 666
228 Ga0451853_0782476 3300041512 Unclassified 1513
229 Ga0450923_028420 3300042125 Unclassified 1129
230 Ga0466957_0172199 3300044842 Bacteria 1411
231 Ga0451576_1531950 3300045051 Unclassified 692
232 Ga0495592_0510613 3300046454 Bacteria 744
233 Ga0495630_0581822 3300046517 Unclassified 858
234 Ga0495586_0176002 3300046535 Bacteria 1210
235 Ga0495621_0011445 3300046539 Bacteria 2745
236 Ga0495645_0007977 3300046543 Bacteria 7370
237 Ga0495659_0218620 3300046664 Bacteria 786
238 Ga0495647_0161315 3300046681 Bacteria 966
239 Ga0495647_0316433 3300046681 Unclassified 706
240 Ga0495600_0057202 3300046809 Bacteria 2548
241 Ga0495674_0030903 3300047319 Bacteria 4867
242 Ga0495684_0057789 3300047471 Bacteria 2956
243 Ga0496100_0532059 3300048903 Bacteria 908
244 Ga0496101_0461890 3300048904 Unclassified 1002
245 Ga0496106_0345768 3300048909 Bacteria 1194
246 Ga0496106_0872222 3300048909 Unclassified 712
247 Ga0496107_0264615 3300048910 Bacteria 1279
248 Ga0496112_0005329 3300048915 Bacteria 11101
249 Ga0496112_0279538 3300048915 Bacteria 1617
250 Ga0496113_0160821 3300048916 Bacteria 1775
251 Ga0496114_0132814 3300048917 Bacteria 2151
252 Ga0496114_1350632 3300048917 Bacteria 600
253 Ga0496115_0238777 3300048918 Bacteria 1498
254 Ga0501307_063947 3300049162 Unclassified 576
255 Ga0501298_038752 3300049521 Bacteria 961
256 Ga0501031_0066513 3300049568 Bacteria 2349
257 Ga0501033_0070801 3300049570 Bacteria 2562
258 Ga0501037_0200374 3300049573 Bacteria 1411
259 Ga0501039_0061133 3300049575 Bacteria 2917
260 Ga0501040_0350498 3300049576 Unclassified 1057
261 Ga0501041_0019628 3300049577 Bacteria 4038
262 Ga0501042_0109880 3300049578 Bacteria 1985
263 Ga0501043_0113942 3300049579 Bacteria 2123
264 Ga0501046_0076690 3300049580 Bacteria 2589
265 Ga0501069_0045260 3300049585 Bacteria 2438
266 Ga0501071_0128815 3300049587 Unclassified 1879
267 Ga0501072_0006514 3300049588 Bacteria 8893
268 Ga0501073_0082248 3300049589 Bacteria 2240
269 Ga0501074_0030962 3300049590 Bacteria 3877
270 Ga0501074_0076293 3300049590 Bacteria 2406
271 Ga0501075_0020106 3300049591 Bacteria 4850
272 Ga0501075_0279252 3300049591 Bacteria 1273
273 Ga0501076_1446331 3300049592 Unclassified 564
274 Ga0501079_0003447 3300049741 Bacteria 11618
275 Ga0501079_0141224 3300049741 Bacteria 1876
276 Ga0501080_0197506 3300049742 Bacteria 1847
277 Ga0501080_0428638 3300049742 Bacteria 1187
278 Ga0501081_0017531 3300049743 Bacteria 4741
279 Ga0501081_0057063 3300049743 Bacteria 2700
280 Ga0501083_0042865 3300049744 Bacteria 3067
281 Ga0501045_0002693 3300049824 Bacteria 12119
282 nmdc:mga0k408_257846_c1 3300050493 Bacteria 1041
283 nmdc:mga06z11_100028_c2 3300050494 Bacteria 1281
284 nmdc:mga05p37_192744_c1 3300050507 Bacteria 2473
285 nmdc:mga05p37_430753_c1 3300050507 Bacteria 1532
286 nmdc:mga09592_555547_c1 3300050508 Bacteria 986
287 nmdc:mga08y16_2595_c1 3300050511 Bacteria 18556
288 nmdc:mga08y16_359266_c1 3300050511 Unclassified 1495
289 nmdc:mga08y16_471322_c1 3300050511 Bacteria 1278
290 nmdc:mga08y16_494591_c1 3300050511 Bacteria 1243
291 nmdc:mga08y16_50400_c1 3300050511 Bacteria 4357
292 nmdc:mga0n895_1011068_c1 3300050512 Unclassified 812
293 nmdc:mga0n895_1436011_c1 3300050512 Bacteria 658
294 nmdc:mga0n895_302641_c1 3300050512 Bacteria 1621
295 nmdc:mga0n895_376494_c1 3300050512 Bacteria 1437
296 nmdc:mga0n895_598008_c1 3300050512 Bacteria 1106
297 nmdc:mga0n895_90441_c1 3300050512 Bacteria 3063
298 nmdc:mga0rr50_240754_c1 3300050513 Bacteria 1500
299 nmdc:mga08x19_178319_c1 3300050514 Bacteria 1450
300 nmdc:mga0a205_309200_c1 3300050515 Bacteria 1453
301 nmdc:mga0a205_94087_c1 3300050515 Bacteria 2895
302 Ga0495601_0049810 3300053077 Unclassified 2642
303 Ga0495595_0281256 3300053084 Unclassified 835
304 Ga0495619_0042010 3300053085 Unclassified 2993
305 Ga0500646_0056806 3300053090 Bacteria 1142
306 Ga0500555_016177 3300053103 Bacteria 2150
307 Ga0500652_212019 3300053131 Bacteria 782
308 Ga0501084_0000835 3300054114 Bacteria 23752
309 Ga0590075_043570 3300059424 Bacteria 1148
310 Ga0590077_009121 3300059426 Bacteria 2032
311 Ga0501082_0094696 3300060353 Bacteria 2580
312 Ga0530510_0048755 3300061734 Bacteria 3061
313 Ga0070669_100043148
314 Ga0065715_10144670
315 Ga0065707_10187162
316 Ga0070676_10336360
317 Ga0070677_10057139
318 Ga0070666_10145953
319 Ga0070680_100071595
320 Ga0068868_100035858
321 Ga0068868_100244266
322 Ga0070691_10002667
323 Ga0070669_100019461
324 Ga0070669_100177161
325 Ga0070671_100075868
326 Ga0070674_100003729
327 Ga0070674_100046942
328 Ga0070673_100015038
329 Ga0070709_10265387
330 Ga0070701_10006295
331 Ga0070705_100006282
332 Ga0070700_100004171
333 Ga0070700_100004954
334 Ga0070694_100010375
335 Ga0070694_100485918
336 Ga0070678_100086365
337 Ga0070662_100082189
338 Ga0068867_100002675
339 Ga0068867_100005839
340 Ga0068867_100285850
341 Ga0068867_100410714
342 Ga0070697_100704720
343 Ga0070672_100240949
344 Ga0070672_100380887
345 Ga0070686_100124986
346 Ga0070686_100133645
347 Ga0070695_100003718
348 Ga0070695_100041484
349 Ga0070695_100336370
350 Ga0070695_100405140
351 Ga0070695_100472619
352 Ga0070696_100011890
353 Ga0070696_100028865
354 Ga0070696_100690882
355 Ga0070693_100902795
356 Ga0070665_100003124
357 Ga0070704_100000652
358 Ga0070704_100149404
359 Ga0070704_100261111
360 Ga0070704_100395352
361 Ga0068857_100350443
362 Ga0068854_100018723
363 Ga0068854_100541781
364 Ga0068854_100700967
365 Ga0070702_100002183
366 Ga0068852_100292051
367 Ga0068859_100065854
368 Ga0068859_100325468
369 Ga0068859_101462887
370 Ga0068864_100091780
371 Ga0068866_10047548
372 Ga0068861_100005416
373 Ga0068861_100017363
374 Ga0068851_10033498
375 Ga0068870_10349664
376 Ga0068863_100157498
377 Ga0068863_100272683
378 Ga0068858_100016550
379 Ga0068858_100110170
380 Ga0068858_100126799
381 Ga0068858_100269184
382 Ga0068860_100530190
383 Ga0068860_101103550
384 Ga0068862_100112106
385 Ga0068862_100926203
386 Ga0068862_100946174
387 Ga0097621_100151942
388 Ga0097621_100710410
389 Ga0068871_100010328
390 Ga0068871_100012694
391 Ga0068871_100090270
392 Ga0075428_100719468
393 Ga0075428_101736392
394 Ga0075433_10040826
395 Ga0075434_100231511
396 Ga0075429_100619945
397 Ga0068865_100053472
398 Ga0068865_100146746
399 Ga0097620_100065850
400 Ga0097620_100325465
401 Ga0097620_101462633
402 Ga0075435_100018007
403 Ga0075435_100061292
404 Ga0075435_100190392
405 Ga0105240_10076802
406 Ga0105240_10170943
407 Ga0111539_10004769
408 Ga0111539_10229360
409 Ga0111539_10245597
410 Ga0111539_10419255
411 Ga0111539_10599072
412 Ga0105245_10053840
413 Ga0105245_10456973
414 Ga0105245_10574027
415 Ga0105247_10010076
416 Ga0105247_10010295
417 Ga0114129_10084220
418 Ga0114129_11514779
419 Ga0105243_10007657
420 Ga0105243_10741063
421 Ga0105242_10018797
422 Ga0105242_10024473
423 Ga0105242_10027323
424 Ga0105248_10056753
425 Ga0105248_10097296
426 Ga0105248_10989890
427 Ga0105237_10178065
428 Ga0105238_10427316
429 Ga0105249_10289897
430 Ga0105249_10653284
431 Ga0105249_10753620
432 Ga0157374_10005941
433 Ga0163162_10100171
434 Ga0163162_10781279
435 Ga0157375_10115922
436 Ga0163163_10135000
437 Ga0163163_10818464
438 Ga0157380_10010138
439 Ga0157380_10029391
440 Ga0157380_10057059
441 Ga0157380_10093754
442 Ga0157380_10816841
443 Ga0157379_10004956
444 Ga0157379_10133045
445 Ga0157376_10020942
446 Ga0157376_10061374
447 Ga0163161_10217077
448 Ga0207653_10044262
449 Ga0207642_10055406
450 Ga0207710_10003937
451 Ga0207710_10061951
452 Ga0207645_10000374
453 Ga0207645_10090640
454 Ga0207645_10537931
455 Ga0207671_10119859
456 Ga0207681_10020546
457 Ga0207681_10026763
458 Ga0207694_10107841
459 Ga0207659_10120522
460 Ga0207687_10027726
461 Ga0207687_10602424
462 Ga0207644_10156429
463 Ga0207686_10265021
464 Ga0207709_10565011
465 Ga0207704_10027474
466 Ga0207704_10109603
467 Ga0207704_10130804
468 Ga0207691_10198065
469 Ga0207711_10017730
470 Ga0207711_10096979
471 Ga0207711_10533889
472 Ga0207651_10143499
473 Ga0207712_10620922
474 Ga0207668_10289265
475 Ga0207640_10041106
476 Ga0207658_10070197
477 Ga0207677_10026074
478 Ga0207677_10285157
479 Ga0207703_10008895
480 Ga0207703_10014697
481 Ga0207703_10015685
482 Ga0207703_10053921
483 Ga0207708_10000853
484 Ga0207708_10004792
485 Ga0207708_10135649
486 Ga0207708_10722343
487 Ga0207641_10960475
488 Ga0207648_10022113
489 Ga0207648_10027133
490 Ga0207648_10282932
491 Ga0207648_10397853
492 Ga0207676_10063848
493 Ga0207676_10381526
494 Ga0207675_100068931
495 Ga0207675_100115102
496 Ga0207675_100152603
497 Ga0207683_10070961
498 Ga0207683_10144585
499 Ga0207428_10005145
500 Ga0207428_10063531
501 Ga0268266_10038995
502 Ga0268265_10062442
503 Ga0268265_10564510
504 Ga0268265_11123174
505 Ga0268264_10059408
506 Ga0268264_10187094
507 Ga0268264_10762331
508 Ga0307408_101041145
509 Ga0307413_10107725
510 Ga0307413_10186524
511 Ga0307410_10025311
512 Ga0307410_10094960
513 Ga0307410_10767980
514 Ga0307409_100008321
515 Ga0307409_100080884
516 Ga0307409_100561845
517 Ga0307416_100132969
518 Ga0307416_100628678
519 Ga0307416_101103407
520 Ga0307414_10023492
521 Ga0307411_10336849
522 Ga0373930_0011405
523 Ga0373948_0010986
524 Ga0373958_0044327
525 Ga0373938_0008855
526 Ga0373940_0000155
527 Ga0373949_0001888
528 Ga0373951_0003635
529 Ga0373952_0009163
530 Ga0373932_0001748
531 Ga0373939_0001913
532 Ga0373941_0011708
533 Ga0373942_0014847
534 Ga0373961_0000790
535 Ga0373931_0009981
536 Ga0373933_0084200
537 Ga0373937_0104148
538 Ga0373937_1352674
539 Ga0395901_1371623
540 Ga0451853_0782476
541 Ga0450923_028420
542 Ga0466957_0172199
543 Ga0451576_1531950
544 Ga0495592_0510613
545 Ga0495630_0581822
546 Ga0495586_0176002
547 Ga0495621_0011445
548 Ga0495645_0007977
549 Ga0495659_0218620
550 Ga0495647_0161315
551 Ga0495647_0316433
552 Ga0495600_0057202
553 Ga0495674_0030903
554 Ga0495684_0057789
555 Ga0496100_0532059
556 Ga0496101_0461890
557 Ga0496106_0345768
558 Ga0496106_0872222
559 Ga0496107_0264615
560 Ga0496112_0005329
561 Ga0496112_0279538
562 Ga0496113_0160821
563 Ga0496114_0132814
564 Ga0496114_1350632
565 Ga0496115_0238777
566 Ga0501307_063947
567 Ga0501298_038752
568 Ga0501031_0066513
569 Ga0501033_0070801
570 Ga0501037_0200374
571 Ga0501039_0061133
572 Ga0501040_0350498
573 Ga0501041_0019628
574 Ga0501042_0109880
575 Ga0501043_0113942
576 Ga0501046_0076690
577 Ga0501069_0045260
578 Ga0501071_0128815
579 Ga0501072_0006514
580 Ga0501073_0082248
581 Ga0501074_0030962
582 Ga0501074_0076293
583 Ga0501075_0020106
584 Ga0501075_0279252
585 Ga0501076_1446331
586 Ga0501079_0003447
587 Ga0501079_0141224
588 Ga0501080_0197506
589 Ga0501080_0428638
590 Ga0501081_0017531
591 Ga0501081_0057063
592 Ga0501083_0042865
593 Ga0501045_0002693
594 nmdc:mga0k408_257846_c1
595 nmdc:mga06z11_100028_c2
596 nmdc:mga05p37_192744_c1
597 nmdc:mga05p37_430753_c1
598 nmdc:mga09592_555547_c1
599 nmdc:mga08y16_2595_c1
600 nmdc:mga08y16_359266_c1
601 nmdc:mga08y16_471322_c1
602 nmdc:mga08y16_494591_c1
603 nmdc:mga08y16_50400_c1
604 nmdc:mga0n895_1011068_c1
605 nmdc:mga0n895_1436011_c1
606 nmdc:mga0n895_302641_c1
607 nmdc:mga0n895_376494_c1
608 nmdc:mga0n895_598008_c1
609 nmdc:mga0n895_90441_c1
610 nmdc:mga0rr50_240754_c1
611 nmdc:mga08x19_178319_c1
612 nmdc:mga0a205_309200_c1
613 nmdc:mga0a205_94087_c1
614 Ga0495601_0049810
615 Ga0495595_0281256
616 Ga0495619_0042010
617 Ga0500646_0056806
618 Ga0500555_016177
619 Ga0500652_212019
620 Ga0501084_0000835
621 Ga0590075_043570
622 Ga0590077_009121
623 Ga0501082_0094696
624 Ga0530510_0048755

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00160

Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

49

200

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xyh-assembly1.cif.gz_A crystal structure of recombinant human cyclophilin j 0.8673 88 239
2poe-assembly1.cif.gz_A crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 0.8622 87 239
2mvz-assembly1.cif.gz_A solution structure for cyclophilin a from geobacillus kaustophilus 0.8585 87 239
2qer-assembly1.cif.gz_A crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 in the presence of dipeptide ala-pro 0.8582 88 239
3jb9-assembly1.cif.gz_d cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution 0.8568 87 238
ID Description Score Start End Superfamily
1xyhA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8673 88 239 2.40.100.10
af_Q4DFI2_1_176_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8639 88 216 2.40.100.10
2mvzA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8585 87 239 2.40.100.10
af_Q2FZU9_3_197_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8523 86 239 2.40.100.10
af_A0A0R4J2Z8_2_164_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.847 81 239 2.40.100.10
ID Description Score Start End GO Terms
AF-A0A2V6EZ34-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9759 87 239 GO:0006457
GO:0140839
GO:0140840
AF-A0A1F2R916-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9758 81 238 GO:0140839
GO:0140840
AF-A0A1F2TLL0-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9758 90 239 GO:0140839
GO:0140840
AF-A0A1V5PMD9-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9744 83 238 GO:0006457
GO:0140839
GO:0140840
AF-A0A7R8AUH8-F1-model_v4 deleted 0.9727 82 238

Map