F401201

General Info

Members Datasets Scaffolds Average Seq Length
311 178 622 236

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10502653|Ga0157374_105026531
Length 260
Sequence MKTVSERPRRKENGMSSHKMQARPKTMIVTGASKGIGAGVTKAFIERGYNVVANSRQMTRFGLAPTERLALVDGDIGEASTAANITSAAMSRFGSINGVVNNAGIFFSKPFTDYTVNDFELLSKTNLKGFLYLTQLAVKQMLVQKTGGSVTSVTATTADHPIAGVNGSVPMMTKGGLEAITRNLALEYAKEGIRFNAVAPGIVDTPMHVNDSKEFLRGLSPMGLISDVKDIVDAIVYLTEASQVTGELLHVDGGAHTGKW

Samples

Sample ID Description Type Environment
1 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
55 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
72 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
74 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
75 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
102 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
103 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
108 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
110 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
111 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
112 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
113 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
127 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
130 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
131 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
137 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
142 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
143 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
144 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
145 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
146 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
147 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
153 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
154 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
155 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.07
Metatranscriptomes 1.93
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.86
Rhizosphere 94.53
Stem 0
Stem Tuber 0
Unclassified 22.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157374_10502653 3300013296 Bacteria 1217
2 rootL2_10069516 3300003322 Bacteria 7161
3 rootH1_10144915 3300003323 Bacteria 6958
4 Ga0065704_10133143 3300005289 Bacteria 1604
5 Ga0065715_10182725 3300005293 Bacteria 1465
6 Ga0065707_10106872 3300005295 Bacteria 2579
7 Ga0070683_100623067 3300005329 Unclassified 1033
8 Ga0070689_100062177 3300005340 Bacteria 2905
9 Ga0070659_100085999 3300005366 Bacteria 2515
10 Ga0070659_100316308 3300005366 Unclassified 1304
11 Ga0070703_10045223 3300005406 Bacteria 1388
12 Ga0070709_10012315 3300005434 Unclassified 4785
13 Ga0070714_100044200 3300005435 Bacteria 3770
14 Ga0070714_100275624 3300005435 Bacteria 1561
15 Ga0070713_100000982 3300005436 Bacteria 18257
16 Ga0070713_100077560 3300005436 Bacteria 2825
17 Ga0070713_100093877 3300005436 Bacteria 2585
18 Ga0070710_10010884 3300005437 Unclassified 4480
19 Ga0070711_100004826 3300005439 Bacteria 7996
20 Ga0070711_100011357 3300005439 Bacteria 5527
21 Ga0070711_100030125 3300005439 Bacteria 3590
22 Ga0070711_100055817 3300005439 Bacteria 2729
23 Ga0070705_100147521 3300005440 Bacteria 1556
24 Ga0070694_100259062 3300005444 Unclassified 1319
25 Ga0070708_100005548 3300005445 Bacteria 10001
26 Ga0070708_100339671 3300005445 Bacteria 1415
27 Ga0070681_10171000 3300005458 Bacteria 2095
28 Ga0070706_100003778 3300005467 Bacteria 14781
29 Ga0070706_100030194 3300005467 Bacteria 4992
30 Ga0070706_100030735 3300005467 Bacteria 4950
31 Ga0070706_100066717 3300005467 Unclassified 3328
32 Ga0070706_100515286 3300005467 Unclassified 1112
33 Ga0070707_100236625 3300005468 Bacteria 1777
34 Ga0070707_100430756 3300005468 Unclassified 1279
35 Ga0070707_100434328 3300005468 Unclassified 1273
36 Ga0070707_100696832 3300005468 Bacteria 978
37 Ga0070698_100030581 3300005471 Bacteria 5582
38 Ga0070698_100041147 3300005471 Bacteria 4745
39 Ga0070698_100162436 3300005471 Bacteria 2177
40 Ga0070698_100270616 3300005471 Unclassified 1630
41 Ga0070698_100278084 3300005471 Bacteria 1606
42 Ga0070698_100646488 3300005471 Unclassified 999
43 Ga0070699_100048369 3300005518 Bacteria 3680
44 Ga0070699_100058222 3300005518 Unclassified 3347
45 Ga0070699_100285113 3300005518 Bacteria 1480
46 Ga0070679_100906604 3300005530 Bacteria 825
47 Ga0070697_100000483 3300005536 Bacteria 30244
48 Ga0070697_100000813 3300005536 Bacteria 23388
49 Ga0070697_100012630 3300005536 Bacteria 6615
50 Ga0070697_100100306 3300005536 Bacteria 2404
51 Ga0070697_100156709 3300005536 Unclassified 1922
52 Ga0070697_100497370 3300005536 Bacteria 1066
53 Ga0070695_100024939 3300005545 Unclassified 3688
54 Ga0070695_100283312 3300005545 Bacteria 1218
55 Ga0070696_100025554 3300005546 Bacteria 4016
56 Ga0070696_100028417 3300005546 Unclassified 3817
57 Ga0070696_100484202 3300005546 Unclassified 982
58 Ga0070693_100031016 3300005547 Bacteria 2927
59 Ga0070704_100327047 3300005549 Unclassified 1286
60 Ga0068855_100817370 3300005563 Unclassified 990
61 Ga0070664_100759238 3300005564 Unclassified 905
62 Ga0068857_100240864 3300005577 Unclassified 1656
63 Ga0068856_100196554 3300005614 Bacteria 2031
64 Ga0070702_100088561 3300005615 Bacteria 1872
65 Ga0068859_100095890 3300005617 Bacteria 3019
66 Ga0068859_101258362 3300005617 Bacteria 815
67 Ga0068864_100913673 3300005618 Bacteria 867
68 Ga0068866_10250900 3300005718 Bacteria 1082
69 Ga0068870_10265382 3300005840 Unclassified 1070
70 Ga0068858_100073761 3300005842 Bacteria 3168
71 Ga0068858_100822056 3300005842 Bacteria 907
72 Ga0070717_10091784 3300006028 Plasmid 2565
73 Ga0070717_10102990 3300006028 Bacteria 2426
74 Ga0070717_10304217 3300006028 Bacteria 1418
75 Ga0070715_10013338 3300006163 Bacteria 3016
76 Ga0070715_10018193 3300006163 Bacteria 2674
77 Ga0070716_100007714 3300006173 Bacteria 5310
78 Ga0070716_100038066 3300006173 Bacteria 2661
79 Ga0070716_100159072 3300006173 Unclassified 1462
80 Ga0070716_100194980 3300006173 Bacteria 1341
81 Ga0070716_100422348 3300006173 Bacteria 964
82 Ga0070712_100000651 3300006175 Bacteria 20428
83 Ga0070712_100004171 3300006175 Bacteria 8888
84 Ga0070712_100221061 3300006175 Bacteria 1499
85 Ga0097621_100147738 3300006237 Bacteria 2014
86 Ga0097621_100328935 3300006237 Bacteria 1355
87 Ga0068871_100585731 3300006358 Unclassified 1013
88 Ga0075428_100191497 3300006844 Bacteria 2212
89 Ga0075430_100034061 3300006846 Bacteria 4322
90 Ga0075431_100388559 3300006847 Unclassified 1398
91 Ga0075431_100662953 3300006847 Unclassified 1023
92 Ga0075433_10276352 3300006852 Unclassified 1488
93 Ga0075433_10812887 3300006852 Unclassified 816
94 Ga0075434_100486869 3300006871 Unclassified 1254
95 Ga0075434_101167862 3300006871 Unclassified 782
96 Ga0075436_100001124 3300006914 Bacteria 18082
97 Ga0075436_100155939 3300006914 Unclassified 1608
98 Ga0075436_100209456 3300006914 Bacteria 1382
99 Ga0075436_100256014 3300006914 Bacteria 1247
100 Ga0075436_100590056 3300006914 Bacteria 818
101 Ga0075436_100686248 3300006914 Bacteria 758
102 Ga0097620_100095893 3300006931 Bacteria 3019
103 Ga0097620_101258660 3300006931 Bacteria 815
104 Ga0075435_100118553 3300007076 Bacteria 2206
105 Ga0075435_100172011 3300007076 Bacteria 1828
106 Ga0075435_100518970 3300007076 Bacteria 1030
107 Ga0099794_10084776 3300007265 Bacteria 1567
108 Ga0099794_10268685 3300007265 Unclassified 881
109 Ga0099795_10003539 3300007788 Unclassified 3885
110 Ga0111539_10288830 3300009094 Bacteria 1908
111 Ga0105247_10211261 3300009101 Bacteria 1309
112 Ga0114129_10027205 3300009147 Bacteria 8097
113 Ga0114129_10076988 3300009147 Bacteria 4642
114 Ga0114129_10359470 3300009147 Unclassified 1927
115 Ga0114129_10434193 3300009147 Unclassified 1725
116 Ga0105241_10135396 3300009174 Unclassified 2000
117 Ga0105241_10298354 3300009174 Bacteria 1382
118 Ga0105242_10310995 3300009176 Bacteria 1442
119 Ga0105238_10170584 3300009551 Bacteria 2151
120 Ga0105249_10571138 3300009553 Unclassified 1183
121 Ga0099796_10031485 3300010159 Bacteria 1730
122 Ga0105246_10112362 3300011119 Bacteria 2003
123 Ga0157369_10179092 3300013105 Bacteria 2231
124 Ga0157378_10151116 3300013297 Bacteria 2164
125 Ga0157378_10225710 3300013297 Bacteria 1782
126 Ga0157378_10485144 3300013297 Bacteria 1232
127 Ga0157378_10490415 3300013297 Bacteria 1226
128 Ga0163162_10274578 3300013306 Bacteria 1817
129 Ga0157379_10164570 3300014968 Unclassified 2002
130 Ga0157379_10437533 3300014968 Bacteria 1206
131 Ga0157379_11057060 3300014968 Bacteria 776
132 Ga0157376_10123684 3300014969 Unclassified 2297
133 Ga0163161_10277980 3300017792 Bacteria 1312
134 Ga0213872_10084151 3300021361 Bacteria 1427
135 Ga0224712_10245267 3300022467 Unclassified 826
136 Ga0224572_1001622 3300024225 Bacteria 3393
137 Ga0224572_1015049 3300024225 Bacteria 1479
138 Ga0228598_1001092 3300024227 Bacteria 5967
139 Ga0207656_10151555 3300025321 Bacteria 1098
140 Ga0207653_10035148 3300025885 Bacteria 1629
141 Ga0207692_10007619 3300025898 Unclassified 4441
142 Ga0207692_10220336 3300025898 Unclassified 1124
143 Ga0207710_10272174 3300025900 Bacteria 851
144 Ga0207685_10007525 3300025905 Bacteria 3040
145 Ga0207699_10012175 3300025906 Bacteria 4369
146 Ga0207699_10383333 3300025906 Bacteria 998
147 Ga0207684_10009187 3300025910 Bacteria 8745
148 Ga0207684_10013626 3300025910 Bacteria 7026
149 Ga0207684_10217633 3300025910 Bacteria 1648
150 Ga0207684_10413983 3300025910 Unclassified 1158
151 Ga0207684_10532414 3300025910 Unclassified 1006
152 Ga0207654_10258076 3300025911 Unclassified 1171
153 Ga0207654_10422518 3300025911 Bacteria 930
154 Ga0207695_10142815 3300025913 Unclassified 2340
155 Ga0207693_10000289 3300025915 Bacteria 46604
156 Ga0207693_10003415 3300025915 Bacteria 13558
157 Ga0207693_10044113 3300025915 Bacteria 3504
158 Ga0207693_10152886 3300025915 Bacteria 1815
159 Ga0207693_10236233 3300025915 Bacteria 1435
160 Ga0207663_10000883 3300025916 Bacteria 13642
161 Ga0207663_10007430 3300025916 Bacteria 5681
162 Ga0207663_10121042 3300025916 Bacteria 1792
163 Ga0207652_10363633 3300025921 Unclassified 1306
164 Ga0207646_10059519 3300025922 Bacteria 3411
165 Ga0207646_10148897 3300025922 Bacteria 2110
166 Ga0207646_10412379 3300025922 Bacteria 1220
167 Ga0207694_10166728 3300025924 Bacteria 1782
168 Ga0207700_10000372 3300025928 Bacteria 26220
169 Ga0207700_10065360 3300025928 Bacteria 2775
170 Ga0207700_10315321 3300025928 Bacteria 1354
171 Ga0207664_10001040 3300025929 Bacteria 18571
172 Ga0207664_10041824 3300025929 Bacteria 3573
173 Ga0207664_10428835 3300025929 Bacteria 1178
174 Ga0207670_10043511 3300025936 Bacteria 2966
175 Ga0207665_10002134 3300025939 Bacteria 13373
176 Ga0207665_10018332 3300025939 Unclassified 4600
177 Ga0207665_10029676 3300025939 Bacteria 3614
178 Ga0207665_10186458 3300025939 Bacteria 1505
179 Ga0207689_10302215 3300025942 Bacteria 1326
180 Ga0207661_10149215 3300025944 Bacteria 2020
181 Ga0207640_10318012 3300025981 Unclassified 1238
182 Ga0207703_10142132 3300026035 Bacteria 2084
183 Ga0207702_10197778 3300026078 Bacteria 1861
184 Ga0207702_11039835 3300026078 Unclassified 813
185 Ga0207676_10769134 3300026095 Bacteria 938
186 Ga0207675_100042432 3300026118 Bacteria 4247
187 Ga0209179_1001372 3300027512 Bacteria 2958
188 Ga0265356_1000036 3300028017 Bacteria 21553
189 Ga0265336_10039493 3300028666 Bacteria 1447
190 Ga0265762_1000132 3300030760 Bacteria 11261
191 Ga0265762_1000900 3300030760 Bacteria 5297
192 Ga0265760_10000730 3300031090 Bacteria 9371
193 Ga0265760_10000978 3300031090 Bacteria 8265
194 Ga0265760_10036869 3300031090 Bacteria 1451
195 Ga0265316_10000790 3300031344 Bacteria 34903
196 Ga0265314_10000719 3300031711 Bacteria 40058
197 Ga0373926_0004951 3300035083 Bacteria 4374
198 Ga0373923_0061383 3300035111 Bacteria 1597
199 Ga0373932_0001806 3300035112 Bacteria 5759
200 Ga0373936_0013522 3300035113 Unclassified 3115
201 Ga0373945_0000279 3300035116 Bacteria 14440
202 Ga0373954_0044515 3300035118 Bacteria 2072
203 Ga0373924_0000148 3300035410 Bacteria 20572
204 Ga0373931_0111017 3300035691 Bacteria 1556
205 Ga0373935_0000314 3300035692 Bacteria 24181
206 Ga0373935_0011027 3300035692 Bacteria 5430
207 Ga0373935_0026504 3300035692 Unclassified 3577
208 Ga0373927_0003000 3300035695 Bacteria 12251
209 Ga0373927_0287037 3300035695 Unclassified 1083
210 Ga0373933_0523352 3300035724 Bacteria 777
211 Ga0373947_0003684 3300035725 Bacteria 9038
212 Ga0373947_0050056 3300035725 Bacteria 2511
213 Ga0373947_0191758 3300035725 Bacteria 1334
214 Ga0373937_0019449 3300036401 Bacteria 6080
215 Ga0373925_0012739 3300037068 Bacteria 6093
216 Ga0373925_0068077 3300037068 Bacteria 2686
217 Ga0436364_0924337 3300037853 Bacteria 54634
218 Ga0436364_1132970 3300037853 Bacteria 1060
219 Ga0436360_0071725 3300039438 Bacteria 2351
220 Ga0436360_0311201 3300039438 Bacteria 859
221 Ga0436360_0419872 3300039438 Bacteria 2526
222 Ga0436361_0478243 3300039447 Unclassified 1230
223 Ga0436361_0483909 3300039447 Bacteria 2707
224 Ga0436361_1067478 3300039447 Bacteria 997
225 Ga0436361_1154387 3300039447 Bacteria 790
226 Ga0436363_0212751 3300039450 Bacteria 1429
227 Ga0436362_0213584 3300039453 Bacteria 1191
228 Ga0436362_1074508 3300039453 Unclassified 1845
229 Ga0436362_1220550 3300039453 Bacteria 1006
230 Ga0495603_0115385 3300046455 Bacteria 1566
231 Ga0495629_0087957 3300046459 Unclassified 2167
232 Ga0495651_0004220 3300046462 Bacteria 11011
233 Ga0495580_0003047 3300046472 Bacteria 14349
234 Ga0495580_0012010 3300046472 Bacteria 6673
235 Ga0495580_0074674 3300046472 Bacteria 2366
236 Ga0495580_0290634 3300046472 Bacteria 1114
237 Ga0495582_0001628 3300046473 Bacteria 12639
238 Ga0495582_0025064 3300046473 Bacteria 3267
239 Ga0495584_0023771 3300046491 Bacteria 3106
240 Ga0495606_0233285 3300046507 Bacteria 1030
241 Ga0495608_0143977 3300046511 Bacteria 1520
242 Ga0495618_0193932 3300046514 Bacteria 1287
243 Ga0495628_0006709 3300046516 Bacteria 10036
244 Ga0495628_0483505 3300046516 Bacteria 896
245 Ga0495630_0107321 3300046517 Bacteria 2115
246 Ga0495630_0279321 3300046517 Bacteria 1276
247 Ga0495665_0011145 3300046531 Bacteria 4866
248 Ga0495665_0069067 3300046531 Bacteria 1863
249 Ga0495665_0186168 3300046531 Bacteria 1078
250 Ga0495587_0008141 3300046536 Bacteria 6758
251 Ga0495621_0060920 3300046539 Unclassified 1370
252 Ga0495645_0147889 3300046543 Bacteria 1634
253 Ga0495667_0004894 3300046559 Bacteria 9057
254 Ga0495667_0470368 3300046559 Unclassified 789
255 Ga0495656_0003760 3300046615 Bacteria 5156
256 Ga0495611_0042862 3300046648 Unclassified 2022
257 Ga0495635_0043109 3300046663 Bacteria 3114
258 Ga0495659_0004491 3300046664 Bacteria 4395
259 Ga0495659_0023471 3300046664 Bacteria 2096
260 Ga0495659_0100764 3300046664 Unclassified 1118
261 Ga0495657_0018203 3300046675 Bacteria 5089
262 Ga0495599_0006203 3300046678 Bacteria 7207
263 Ga0495658_0086936 3300046683 Bacteria 1845
264 Ga0495624_0077065 3300046690 Bacteria 2068
265 Ga0495581_0019923 3300047315 Bacteria 3895
266 Ga0495674_0045576 3300047319 Bacteria 3894
267 Ga0495674_0111632 3300047319 Bacteria 2317
268 Ga0495674_0438335 3300047319 Unclassified 1051
269 Ga0495680_0014427 3300047322 Bacteria 6841
270 Ga0495675_0000084 3300047444 Bacteria 66406
271 Ga0495684_0034298 3300047471 Bacteria 3894
272 Ga0495602_0033349 3300048088 Bacteria 4831
273 Ga0495602_0132865 3300048088 Bacteria 1982
274 Ga0496100_0147554 3300048903 Bacteria 1674
275 Ga0496102_0123489 3300048905 Bacteria 2419
276 Ga0496104_0042193 3300048907 Bacteria 4280
277 Ga0496104_0905981 3300048907 Bacteria 787
278 Ga0496105_0114844 3300048908 Bacteria 2221
279 Ga0496106_0084974 3300048909 Bacteria 2436
280 Ga0496107_0350906 3300048910 Unclassified 1098
281 Ga0496110_0222394 3300048913 Bacteria 1717
282 Ga0496111_0021886 3300048914 Bacteria 4469
283 Ga0496112_0697013 3300048915 Unclassified 943
284 Ga0496115_0213295 3300048918 Bacteria 1594
285 Ga0496115_0414155 3300048918 Unclassified 1092
286 Ga0501047_0169527 3300049581 Bacteria 2052
287 Ga0501070_0023073 3300049586 Bacteria 5211
288 Ga0501044_0002198 3300049823 Bacteria 22363
289 nmdc:mga05p37_190611_c1 3300050507 Bacteria 2490
290 nmdc:mga05p37_23728_c1 3300050507 Bacteria 7448
291 nmdc:mga05p37_387232_c1 3300050507 Unclassified 1636
292 nmdc:mga05p37_84319_c1 3300050507 Bacteria 3915
293 nmdc:mga05p37_9697_c1 3300050507 Bacteria 11415
294 nmdc:mga09592_153432_c1 3300050508 Bacteria 1988
295 nmdc:mga0qj67_7462_c1 3300050509 Bacteria 8078
296 nmdc:mga06r32_529721_c1 3300050510 Unclassified 1153
297 nmdc:mga08y16_236976_c1 3300050511 Bacteria 1887
298 nmdc:mga0n895_56833_c1 3300050512 Bacteria 3856
299 nmdc:mga0rr50_168354_c1 3300050513 Bacteria 1784
300 nmdc:mga0rr50_284309_c1 3300050513 Bacteria 1381
301 nmdc:mga0rr50_47746_c1 3300050513 Bacteria 3161
302 nmdc:mga0rr50_68169_c1 3300050513 Unclassified 2705
303 nmdc:mga08x19_26159_c1 3300050514 Bacteria 3640
304 nmdc:mga08x19_316419_c1 3300050514 Unclassified 1086
305 nmdc:mga08x19_316517_c1 3300050514 Bacteria 1085
306 nmdc:mga08x19_364284_c1 3300050514 Unclassified 1011
307 nmdc:mga08x19_472617_c1 3300050514 Bacteria 883
308 nmdc:mga08x19_57133_c1 3300050514 Unclassified 2520
309 nmdc:mga0a205_204558_c1 3300050515 Unclassified 1864
310 nmdc:mga0a205_27676_c1 3300050515 Bacteria 5415
311 Ga0495601_0200277 3300053077 Unclassified 1305
312 Ga0157374_10502653
313 rootL2_10069516
314 rootH1_10144915
315 Ga0065704_10133143
316 Ga0065715_10182725
317 Ga0065707_10106872
318 Ga0070683_100623067
319 Ga0070689_100062177
320 Ga0070659_100085999
321 Ga0070659_100316308
322 Ga0070703_10045223
323 Ga0070709_10012315
324 Ga0070714_100044200
325 Ga0070714_100275624
326 Ga0070713_100000982
327 Ga0070713_100077560
328 Ga0070713_100093877
329 Ga0070710_10010884
330 Ga0070711_100004826
331 Ga0070711_100011357
332 Ga0070711_100030125
333 Ga0070711_100055817
334 Ga0070705_100147521
335 Ga0070694_100259062
336 Ga0070708_100005548
337 Ga0070708_100339671
338 Ga0070681_10171000
339 Ga0070706_100003778
340 Ga0070706_100030194
341 Ga0070706_100030735
342 Ga0070706_100066717
343 Ga0070706_100515286
344 Ga0070707_100236625
345 Ga0070707_100430756
346 Ga0070707_100434328
347 Ga0070707_100696832
348 Ga0070698_100030581
349 Ga0070698_100041147
350 Ga0070698_100162436
351 Ga0070698_100270616
352 Ga0070698_100278084
353 Ga0070698_100646488
354 Ga0070699_100048369
355 Ga0070699_100058222
356 Ga0070699_100285113
357 Ga0070679_100906604
358 Ga0070697_100000483
359 Ga0070697_100000813
360 Ga0070697_100012630
361 Ga0070697_100100306
362 Ga0070697_100156709
363 Ga0070697_100497370
364 Ga0070695_100024939
365 Ga0070695_100283312
366 Ga0070696_100025554
367 Ga0070696_100028417
368 Ga0070696_100484202
369 Ga0070693_100031016
370 Ga0070704_100327047
371 Ga0068855_100817370
372 Ga0070664_100759238
373 Ga0068857_100240864
374 Ga0068856_100196554
375 Ga0070702_100088561
376 Ga0068859_100095890
377 Ga0068859_101258362
378 Ga0068864_100913673
379 Ga0068866_10250900
380 Ga0068870_10265382
381 Ga0068858_100073761
382 Ga0068858_100822056
383 Ga0070717_10091784
384 Ga0070717_10102990
385 Ga0070717_10304217
386 Ga0070715_10013338
387 Ga0070715_10018193
388 Ga0070716_100007714
389 Ga0070716_100038066
390 Ga0070716_100159072
391 Ga0070716_100194980
392 Ga0070716_100422348
393 Ga0070712_100000651
394 Ga0070712_100004171
395 Ga0070712_100221061
396 Ga0097621_100147738
397 Ga0097621_100328935
398 Ga0068871_100585731
399 Ga0075428_100191497
400 Ga0075430_100034061
401 Ga0075431_100388559
402 Ga0075431_100662953
403 Ga0075433_10276352
404 Ga0075433_10812887
405 Ga0075434_100486869
406 Ga0075434_101167862
407 Ga0075436_100001124
408 Ga0075436_100155939
409 Ga0075436_100209456
410 Ga0075436_100256014
411 Ga0075436_100590056
412 Ga0075436_100686248
413 Ga0097620_100095893
414 Ga0097620_101258660
415 Ga0075435_100118553
416 Ga0075435_100172011
417 Ga0075435_100518970
418 Ga0099794_10084776
419 Ga0099794_10268685
420 Ga0099795_10003539
421 Ga0111539_10288830
422 Ga0105247_10211261
423 Ga0114129_10027205
424 Ga0114129_10076988
425 Ga0114129_10359470
426 Ga0114129_10434193
427 Ga0105241_10135396
428 Ga0105241_10298354
429 Ga0105242_10310995
430 Ga0105238_10170584
431 Ga0105249_10571138
432 Ga0099796_10031485
433 Ga0105246_10112362
434 Ga0157369_10179092
435 Ga0157378_10151116
436 Ga0157378_10225710
437 Ga0157378_10485144
438 Ga0157378_10490415
439 Ga0163162_10274578
440 Ga0157379_10164570
441 Ga0157379_10437533
442 Ga0157379_11057060
443 Ga0157376_10123684
444 Ga0163161_10277980
445 Ga0213872_10084151
446 Ga0224712_10245267
447 Ga0224572_1001622
448 Ga0224572_1015049
449 Ga0228598_1001092
450 Ga0207656_10151555
451 Ga0207653_10035148
452 Ga0207692_10007619
453 Ga0207692_10220336
454 Ga0207710_10272174
455 Ga0207685_10007525
456 Ga0207699_10012175
457 Ga0207699_10383333
458 Ga0207684_10009187
459 Ga0207684_10013626
460 Ga0207684_10217633
461 Ga0207684_10413983
462 Ga0207684_10532414
463 Ga0207654_10258076
464 Ga0207654_10422518
465 Ga0207695_10142815
466 Ga0207693_10000289
467 Ga0207693_10003415
468 Ga0207693_10044113
469 Ga0207693_10152886
470 Ga0207693_10236233
471 Ga0207663_10000883
472 Ga0207663_10007430
473 Ga0207663_10121042
474 Ga0207652_10363633
475 Ga0207646_10059519
476 Ga0207646_10148897
477 Ga0207646_10412379
478 Ga0207694_10166728
479 Ga0207700_10000372
480 Ga0207700_10065360
481 Ga0207700_10315321
482 Ga0207664_10001040
483 Ga0207664_10041824
484 Ga0207664_10428835
485 Ga0207670_10043511
486 Ga0207665_10002134
487 Ga0207665_10018332
488 Ga0207665_10029676
489 Ga0207665_10186458
490 Ga0207689_10302215
491 Ga0207661_10149215
492 Ga0207640_10318012
493 Ga0207703_10142132
494 Ga0207702_10197778
495 Ga0207702_11039835
496 Ga0207676_10769134
497 Ga0207675_100042432
498 Ga0209179_1001372
499 Ga0265356_1000036
500 Ga0265336_10039493
501 Ga0265762_1000132
502 Ga0265762_1000900
503 Ga0265760_10000730
504 Ga0265760_10000978
505 Ga0265760_10036869
506 Ga0265316_10000790
507 Ga0265314_10000719
508 Ga0373926_0004951
509 Ga0373923_0061383
510 Ga0373932_0001806
511 Ga0373936_0013522
512 Ga0373945_0000279
513 Ga0373954_0044515
514 Ga0373924_0000148
515 Ga0373931_0111017
516 Ga0373935_0000314
517 Ga0373935_0011027
518 Ga0373935_0026504
519 Ga0373927_0003000
520 Ga0373927_0287037
521 Ga0373933_0523352
522 Ga0373947_0003684
523 Ga0373947_0050056
524 Ga0373947_0191758
525 Ga0373937_0019449
526 Ga0373925_0012739
527 Ga0373925_0068077
528 Ga0436364_0924337
529 Ga0436364_1132970
530 Ga0436360_0071725
531 Ga0436360_0311201
532 Ga0436360_0419872
533 Ga0436361_0478243
534 Ga0436361_0483909
535 Ga0436361_1067478
536 Ga0436361_1154387
537 Ga0436363_0212751
538 Ga0436362_0213584
539 Ga0436362_1074508
540 Ga0436362_1220550
541 Ga0495603_0115385
542 Ga0495629_0087957
543 Ga0495651_0004220
544 Ga0495580_0003047
545 Ga0495580_0012010
546 Ga0495580_0074674
547 Ga0495580_0290634
548 Ga0495582_0001628
549 Ga0495582_0025064
550 Ga0495584_0023771
551 Ga0495606_0233285
552 Ga0495608_0143977
553 Ga0495618_0193932
554 Ga0495628_0006709
555 Ga0495628_0483505
556 Ga0495630_0107321
557 Ga0495630_0279321
558 Ga0495665_0011145
559 Ga0495665_0069067
560 Ga0495665_0186168
561 Ga0495587_0008141
562 Ga0495621_0060920
563 Ga0495645_0147889
564 Ga0495667_0004894
565 Ga0495667_0470368
566 Ga0495656_0003760
567 Ga0495611_0042862
568 Ga0495635_0043109
569 Ga0495659_0004491
570 Ga0495659_0023471
571 Ga0495659_0100764
572 Ga0495657_0018203
573 Ga0495599_0006203
574 Ga0495658_0086936
575 Ga0495624_0077065
576 Ga0495581_0019923
577 Ga0495674_0045576
578 Ga0495674_0111632
579 Ga0495674_0438335
580 Ga0495680_0014427
581 Ga0495675_0000084
582 Ga0495684_0034298
583 Ga0495602_0033349
584 Ga0495602_0132865
585 Ga0496100_0147554
586 Ga0496102_0123489
587 Ga0496104_0042193
588 Ga0496104_0905981
589 Ga0496105_0114844
590 Ga0496106_0084974
591 Ga0496107_0350906
592 Ga0496110_0222394
593 Ga0496111_0021886
594 Ga0496112_0697013
595 Ga0496115_0213295
596 Ga0496115_0414155
597 Ga0501047_0169527
598 Ga0501070_0023073
599 Ga0501044_0002198
600 nmdc:mga05p37_190611_c1
601 nmdc:mga05p37_23728_c1
602 nmdc:mga05p37_387232_c1
603 nmdc:mga05p37_84319_c1
604 nmdc:mga05p37_9697_c1
605 nmdc:mga09592_153432_c1
606 nmdc:mga0qj67_7462_c1
607 nmdc:mga06r32_529721_c1
608 nmdc:mga08y16_236976_c1
609 nmdc:mga0n895_56833_c1
610 nmdc:mga0rr50_168354_c1
611 nmdc:mga0rr50_284309_c1
612 nmdc:mga0rr50_47746_c1
613 nmdc:mga0rr50_68169_c1
614 nmdc:mga08x19_26159_c1
615 nmdc:mga08x19_316419_c1
616 nmdc:mga08x19_316517_c1
617 nmdc:mga08x19_364284_c1
618 nmdc:mga08x19_472617_c1
619 nmdc:mga08x19_57133_c1
620 nmdc:mga0a205_204558_c1
621 nmdc:mga0a205_27676_c1
622 Ga0495601_0200277

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

25

215

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

31

256

0.91

PF08659

KR

KR domain

25

161

0.88

PF23441

18

257

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
3un1-assembly1.cif.gz_A crystal structure of an oxidoreductase from sinorhizobium meliloti 1021 0.9394 4 236
3un1-assembly1.cif.gz_A crystal structure of an oxidoreductase from sinorhizobium meliloti 1021 0.924 4 236
6t7m-assembly1.cif.gz_C crystal structure of salmonella typhimurium fabg at 2.65 a resolution 0.9206 5 230
2cdh-assembly1.cif.gz_G architecture of the thermomyces lanuginosus fungal fatty acid synthase at 5 angstrom resolution. 0.9201 4 230
5itv-assembly3.cif.gz_D crystal structure of bacillus subtilis bacc dihydroanticapsin 7-dehydrogenase in complex with nadh 0.916 5 229
ID Description Score Start End Superfamily
af_A0A1D6ED38_49_231_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9462 4 175 3.40.50.720
5itvD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.916 5 229 3.40.50.720
5itvA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9151 5 229 3.40.50.720
3awdA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9147 5 229 3.40.50.720
af_Q5BLE6_285_550_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9124 5 230 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1W9HII7-F1-model_v4 3-oxoacyl-ACP reductase 0.9837 1 155
AF-A0A7I8CZV1-F1-model_v4 Gluconate 5-dehydrogenase 0.9611 1 194 GO:0016616
GO:0030497
AF-A0A1W9HII7-F1-model_v4 3-oxoacyl-ACP reductase 0.9592 1 155
AF-A0A520JEG2-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9548 1 161 GO:0016020
AF-A0A447J550-F1-model_v4 deleted 0.9537 4 180

Map