F400792

General Info

Members Datasets Scaffolds Average Seq Length
310 219 620 620

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100048124|Ga0307408_1000481241
Length 735
Sequence MLVAYAVADVTLAHRLQRGDESVWLIEARDGEFECLHQFASLLLDIEFEHVADARVEAEQFTVKEGGDGGSVWFDAGKAFTNEFLLAAGHADGCSTLQPAAEFHLRSSAGLNARARICRQTFLSAVSELRFAPVSILSVHNISVRFNDRYVLEGLSLTINEHDRIGMVGRNGSGKSTLLKIIAGLQQPDSGEVTKRRDLLIGYLPQEFSLDPALTVEENVRAGAKHITDLIHEFESLPADSKRHHDIEQQILAHDGWHLDSRIATAMAHLNCPPPQSSITKLSGGEQRRIALCRAIISQPDLLILDEPTNHLDTESIEWLAEFLENYPGTFLLVTHDRYFLDRITNTIVEVSNGKSYSYEGNYTDYLLAKAEREATAETTEHKRQMFLRRELEWVRRGPKARTTKSKSRLDRYFEVAGEKSVEIDKDVDLVLPPAPQLANRIVELTNVGMELGDRCLFSHFNLSFAAGQRIGVFGRNGLGKTTLLKLMLGQIEPTQGTVKIGMLTKFNYVDQGRLQLNENRTVLDEVSDGSEFVIFGEDKLSVRAYLKRFLFTDDRITALVKHLSGGERSRLLLARILKNGGNFLILDEPTNDLDLPTLRVLEEALIAFAGVVVVVSHDRYFLNRVCTGIIAFEGDGRVVYSEGNYDYDRKPRKLNFKEARELEGMESAIAEVESEIARIEALFSEPDFNRKYGPQMNELTAELAAQKEKLSALFARWEELENIRVGAAAESPSQ

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
76 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
77 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
78 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
81 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
87 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
109 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
110 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
111 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
112 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
113 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
120 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
138 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
163 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
164 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
169 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
178 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
179 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
180 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
181 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
182 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
183 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
184 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
185 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
186 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
187 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
188 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
189 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
190 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
191 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
192 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
193 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
194 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
195 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
196 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
197 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
198 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
199 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
200 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
201 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
202 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
203 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
204 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
205 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
206 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
207 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
208 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
209 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
210 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
211 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
212 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
213 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
214 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
215 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
216 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
217 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
218 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
219 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.13
Metatranscriptomes 0
Isolates 13.87

Biome Distribution

Category Percentage (%)
Aerial Root 0.65
Bulb 0
Endosphere 0.65
Nodule 0.32
Rhizoplane 0.65
Rhizosphere 87.1
Stem 0
Stem Tuber 0
Unclassified 0.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100048124 3300031548 Bacteria 3057
2 JGI24741J21665_1005171 3300001915 Bacteria 2771
3 rootH2_10037204 3300003320 Bacteria 4117
4 rootH1_10077897 3300003323 Bacteria 2798
5 Ga0065714_10064676 3300005288 Bacteria 24213
6 Ga0065704_10071161 3300005289 Bacteria 12737
7 Ga0065704_10078987 3300005289 Bacteria 4286
8 Ga0065704_10085525 3300005289 Bacteria 3213
9 Ga0070658_10014800 3300005327 Bacteria 6252
10 Ga0070690_100031322 3300005330 Bacteria 3312
11 Ga0070670_100031850 3300005331 Bacteria 4541
12 Ga0070670_100132808 3300005331 Bacteria 2150
13 Ga0070682_100000138 3300005337 Bacteria 59549
14 Ga0070689_100003414 3300005340 Bacteria 10560
15 Ga0070668_100090953 3300005347 Bacteria 2405
16 Ga0070688_100009055 3300005365 Bacteria 5429
17 Ga0070667_100003195 3300005367 Bacteria 14039
18 Ga0070698_100062424 3300005471 Bacteria 3759
19 Ga0070679_100016106 3300005530 Bacteria 7202
20 Ga0068853_100050422 3300005539 Bacteria 3581
21 Ga0070686_100002590 3300005544 Bacteria 9978
22 Ga0068855_100000030 3300005563 Bacteria 171124
23 Ga0068855_100020678 3300005563 Bacteria 7893
24 Ga0068857_100062006 3300005577 Bacteria 3324
25 Ga0068856_100000079 3300005614 Bacteria 92486
26 Ga0068856_100014217 3300005614 Bacteria 7694
27 Ga0068852_100045222 3300005616 Bacteria 3744
28 Ga0068859_100056491 3300005617 Bacteria 3951
29 Ga0068859_100215094 3300005617 Bacteria 2009
30 Ga0068861_100002847 3300005719 Bacteria 11381
31 Ga0068858_100137292 3300005842 Bacteria 2295
32 Ga0068860_100048274 3300005843 Bacteria 4057
33 Ga0081455_10008427 3300005937 Bacteria 10723
34 Ga0081455_10039771 3300005937 Bacteria 4152
35 Ga0075428_100004049 3300006844 Bacteria 16108
36 Ga0075428_100078941 3300006844 Bacteria 3593
37 Ga0068865_100007013 3300006881 Bacteria 6915
38 Ga0097620_100056495 3300006931 Bacteria 3951
39 Ga0097620_100215075 3300006931 Bacteria 2009
40 Ga0105244_10000001 3300009036 Bacteria 1034899
41 Ga0105240_10021964 3300009093 Bacteria 8476
42 Ga0105240_10071829 3300009093 Bacteria 4279
43 Ga0111539_10001471 3300009094 Bacteria 31449
44 Ga0111539_10003860 3300009094 Bacteria 19731
45 Ga0111539_10042574 3300009094 Bacteria 5451
46 Ga0105245_10000292 3300009098 Bacteria 47870
47 Ga0105243_10001433 3300009148 Bacteria 21013
48 Ga0105242_10014901 3300009176 Bacteria 6025
49 Ga0105237_10003702 3300009545 Bacteria 18025
50 Ga0105238_10010063 3300009551 Bacteria 9488
51 Ga0105238_10011817 3300009551 Bacteria 8796
52 Ga0105249_10035755 3300009553 Bacteria 4504
53 Ga0157373_10000005 3300013100 Bacteria 262158
54 Ga0157371_10000052 3300013102 Bacteria 179522
55 Ga0157370_10002334 3300013104 Bacteria 22941
56 Ga0157369_10000355 3300013105 Bacteria 60997
57 Ga0157375_10003431 3300013308 Bacteria 13746
58 Ga0182008_10000037 3300014497 Bacteria 129884
59 Ga0182006_1000003 3300015261 Bacteria 826681
60 Ga0163161_10013292 3300017792 Bacteria 5724
61 Ga0209675_1000323 3300025291 Bacteria 42747
62 Ga0207655_1000018 3300025728 Bacteria 537129
63 Ga0207707_10116926 3300025912 Bacteria 2330
64 Ga0207695_10052894 3300025913 Bacteria 4251
65 Ga0207695_10063709 3300025913 Bacteria 3799
66 Ga0207695_10085988 3300025913 Bacteria 3172
67 Ga0207671_10005587 3300025914 Bacteria 11549
68 Ga0207663_10002254 3300025916 Bacteria 9225
69 Ga0207694_10009264 3300025924 Bacteria 7430
70 Ga0207694_10011782 3300025924 Bacteria 6596
71 Ga0207687_10000048 3300025927 Bacteria 96215
72 Ga0207686_10010680 3300025934 Bacteria 5002
73 Ga0207709_10001011 3300025935 Bacteria 20847
74 Ga0207670_10003129 3300025936 Bacteria 8758
75 Ga0207667_10000104 3300025949 Bacteria 134147
76 Ga0207712_10079324 3300025961 Bacteria 2385
77 Ga0207668_10022729 3300025972 Bacteria 4020
78 Ga0207658_10081477 3300025986 Bacteria 2482
79 Ga0207703_10058381 3300026035 Bacteria 3149
80 Ga0207702_10003055 3300026078 Bacteria 15552
81 Ga0207702_10052317 3300026078 Bacteria 3455
82 Ga0207702_10100030 3300026078 Bacteria 2557
83 Ga0207641_10005505 3300026088 Bacteria 10795
84 Ga0207641_10104018 3300026088 Bacteria 2506
85 Ga0207641_10125445 3300026088 Bacteria 2298
86 Ga0207676_10021333 3300026095 Bacteria 4751
87 Ga0207674_10096271 3300026116 Bacteria 2945
88 Ga0207675_100004903 3300026118 Bacteria 12898
89 Ga0207428_10010770 3300027907 Bacteria 8152
90 Ga0207428_10014404 3300027907 Bacteria 6873
91 Ga0207428_10091029 3300027907 Bacteria 2368
92 Ga0268264_10001831 3300028381 Bacteria 19421
93 Ga0265337_1000211 3300028556 Bacteria 31300
94 Ga0265337_1000980 3300028556 Bacteria 14955
95 Ga0265337_1001856 3300028556 Bacteria 10097
96 Ga0265326_10001037 3300028558 Bacteria 9939
97 Ga0265326_10003010 3300028558 Bacteria 5607
98 Ga0265319_1000202 3300028563 Bacteria 45057
99 Ga0265319_1005253 3300028563 Bacteria 6243
100 Ga0265334_10007945 3300028573 Bacteria 4533
101 Ga0265318_10002257 3300028577 Bacteria 10379
102 Ga0265318_10009151 3300028577 Bacteria 4372
103 Ga0265323_10000322 3300028653 Bacteria 27460
104 Ga0265323_10000910 3300028653 Bacteria 15621
105 Ga0265323_10015505 3300028653 Bacteria 2997
106 Ga0265322_10000172 3300028654 Bacteria 29559
107 Ga0265336_10000163 3300028666 Bacteria 47125
108 Ga0265338_10000160 3300028800 Bacteria 122713
109 Ga0265338_10000310 3300028800 Bacteria 88170
110 Ga0265338_10000475 3300028800 Bacteria 71543
111 Ga0265338_10000528 3300028800 Bacteria 67191
112 Ga0265338_10001064 3300028800 Bacteria 45619
113 Ga0265338_10001856 3300028800 Bacteria 33182
114 Ga0265338_10004158 3300028800 Bacteria 19773
115 Ga0265338_10005770 3300028800 Bacteria 16007
116 Ga0265338_10008287 3300028800 Bacteria 12647
117 Ga0265338_10011884 3300028800 Bacteria 9998
118 Ga0265338_10021233 3300028800 Bacteria 6781
119 Ga0265338_10041942 3300028800 Bacteria 4271
120 Ga0265338_10065546 3300028800 Bacteria 3149
121 Ga0265338_10068887 3300028800 Bacteria 3045
122 Ga0265324_10000595 3300029957 Bacteria 24811
123 Ga0265324_10002351 3300029957 Bacteria 9768
124 Ga0265324_10005448 3300029957 Bacteria 5495
125 Ga0265324_10005538 3300029957 Bacteria 5439
126 Ga0265324_10005623 3300029957 Bacteria 5374
127 Ga0265324_10007305 3300029957 Bacteria 4496
128 Ga0265330_10003608 3300031235 Bacteria 8060
129 Ga0265332_10004756 3300031238 Bacteria 6330
130 Ga0265328_10016859 3300031239 Unclassified 2837
131 Ga0265320_10005826 3300031240 Bacteria 7850
132 Ga0265320_10012589 3300031240 Bacteria 4915
133 Ga0265325_10011081 3300031241 Bacteria 5188
134 Ga0265329_10001545 3300031242 Bacteria 11025
135 Ga0265329_10004970 3300031242 Bacteria 5442
136 Ga0265340_10008655 3300031247 Bacteria 5486
137 Ga0265331_10000987 3300031250 Bacteria 22426
138 Ga0265327_10001087 3300031251 Bacteria 37858
139 Ga0265316_10017648 3300031344 Bacteria 6157
140 Ga0265316_10106863 3300031344 Unclassified 2122
141 Ga0307509_10016757 3300031507 Bacteria 8468
142 Ga0307408_100019377 3300031548 Bacteria 4581
143 Ga0265313_10005284 3300031595 Bacteria 9559
144 Ga0307508_10001440 3300031616 Bacteria 26792
145 Ga0265314_10000050 3300031711 Bacteria 189257
146 Ga0265314_10017230 3300031711 Bacteria 5675
147 Ga0265314_10074346 3300031711 Bacteria 2264
148 Ga0265342_10003225 3300031712 Bacteria 13555
149 Ga0316576_10000082 3300031727 Bacteria 32863
150 Ga0316576_10011103 3300031727 Bacteria 5883
151 Ga0316576_10037231 3300031727 Bacteria 3482
152 Ga0316578_10005106 3300031728 Bacteria 6319
153 Ga0307516_10028200 3300031730 Bacteria 5683
154 Ga0307413_10000638 3300031824 Bacteria 11854
155 Ga0307410_10067431 3300031852 Bacteria 2468
156 Ga0307406_10012093 3300031901 Bacteria 4912
157 Ga0307407_10001114 3300031903 Bacteria 9388
158 Ga0307412_10000062 3300031911 Bacteria 126099
159 Ga0307412_10000155 3300031911 Bacteria 48968
160 Ga0307412_10001478 3300031911 Bacteria 13061
161 Ga0307412_10037368 3300031911 Bacteria 3120
162 Ga0307409_100003077 3300031995 Bacteria 8927
163 Ga0307416_100000013 3300032002 Bacteria 283585
164 Ga0307416_100117701 3300032002 Bacteria 2359
165 Ga0307414_10000041 3300032004 Bacteria 144783
166 Ga0307414_10015055 3300032004 Bacteria 4660
167 Ga0307411_10001176 3300032005 Bacteria 10305
168 Ga0307411_10012566 3300032005 Bacteria 4629
169 Ga0373930_0001719 3300034816 Bacteria 3317
170 Ga0373929_0001338 3300035085 Bacteria 4737
171 Ga0373944_0000235 3300035089 Bacteria 12039
172 Ga0373932_0000001 3300035112 Bacteria 1459067
173 Ga0316574_0002903 3300035398 Bacteria 8719
174 Ga0316574_0068665 3300035398 Bacteria 2235
175 Ga0373931_0000004 3300035691 Bacteria 535140
176 Ga0373947_0013760 3300035725 Bacteria 4638
177 Ga0373937_0030007 3300036401 Bacteria 4925
178 Ga0373937_0139799 3300036401 Bacteria 2265
179 Ga0373925_0000572 3300037068 Bacteria 35958
180 Ga0373925_0012494 3300037068 Bacteria 6151
181 Ga0395900_0155674 3300037418 Bacteria 2334
182 Ga0436365_1247076 3300039437 Bacteria 4473
183 Ga0439465_0000262 3300041413 Bacteria 14602
184 Ga0439445_0000623 3300042004 Bacteria 7285
185 Ga0451577_0000947 3300042876 Bacteria 42570
186 Ga0451577_0001087 3300042876 Bacteria 38893
187 Ga0451577_0002332 3300042876 Bacteria 22872
188 Ga0451577_0017512 3300042876 Bacteria 6619
189 Ga0451577_0093335 3300042876 Bacteria 2688
190 Ga0453683_0003623 3300044673 Bacteria 11331
191 Ga0453684_0000004 3300044712 Bacteria 1469893
192 Ga0453684_0001615 3300044712 Bacteria 61811
193 Ga0453684_0003288 3300044712 Bacteria 36835
194 Ga0453684_0017937 3300044712 Bacteria 10909
195 Ga0453684_0050612 3300044712 Bacteria 5461
196 Ga0451576_0004382 3300045051 Bacteria 18392
197 Ga0451576_0014108 3300045051 Bacteria 8904
198 Ga0451576_0020414 3300045051 Bacteria 7216
199 Ga0451576_0039802 3300045051 Bacteria 4976
200 Ga0451576_0041284 3300045051 Bacteria 4878
201 Ga0451576_0114941 3300045051 Bacteria 2802
202 Ga0466967_0078235 3300045976 Bacteria 2979
203 Ga0495627_000068 3300046453 Bacteria 126904
204 Ga0495592_0000180 3300046454 Bacteria 55455
205 Ga0495596_0001332 3300046500 Bacteria 14238
206 Ga0495606_0057007 3300046507 Bacteria 2518
207 Ga0495610_0000006 3300046512 Bacteria 856822
208 Ga0495628_0000045 3300046516 Bacteria 98769
209 Ga0495632_0002092 3300046519 Bacteria 15620
210 Ga0495643_0059404 3300046522 Bacteria 2032
211 Ga0495663_0000110 3300046525 Bacteria 34123
212 Ga0495654_0000017 3300046530 Bacteria 295999
213 Ga0495640_0024174 3300046533 Bacteria 4421
214 Ga0495586_0000644 3300046535 Bacteria 20079
215 Ga0495609_0000017 3300046538 Bacteria 306684
216 Ga0495645_0006706 3300046543 Bacteria 8000
217 Ga0495633_0000037 3300046558 Bacteria 184006
218 Ga0495633_0003345 3300046558 Bacteria 10758
219 Ga0495668_0002080 3300046616 Bacteria 17333
220 Ga0495634_0001840 3300046642 Bacteria 18279
221 Ga0495625_0000501 3300046660 Bacteria 58243
222 Ga0495599_0005735 3300046678 Bacteria 7451
223 Ga0495680_0016217 3300047322 Bacteria 6407
224 Ga0495686_0000127 3300047472 Bacteria 156278
225 Ga0495686_0002112 3300047472 Bacteria 19479
226 Ga0496114_0038362 3300048917 Bacteria 3964
227 Ga0496115_0005011 3300048918 Bacteria 9620
228 Ga0496116_0000052 3300048919 Bacteria 295469
229 Ga0496117_0000082 3300048920 Bacteria 220895
230 Ga0496118_0000321 3300048921 Bacteria 82959
231 Ga0496119_0000006 3300048922 Bacteria 505999
232 Ga0496121_0055852 3300048924 Bacteria 3286
233 Ga0496122_0000230 3300048925 Bacteria 125542
234 Ga0496122_0001851 3300048925 Bacteria 32256
235 Ga0496122_0001875 3300048925 Bacteria 31961
236 Ga0496122_0002049 3300048925 Bacteria 29920
237 Ga0496123_0000476 3300048926 Bacteria 69684
238 Ga0496123_0008868 3300048926 Bacteria 9157
239 Ga0496124_0003570 3300048927 Bacteria 18914
240 Ga0496125_0000029 3300048928 Bacteria 382675
241 Ga0496125_0000778 3300048928 Bacteria 52180
242 Ga0496125_0001315 3300048928 Bacteria 36765
243 Ga0496125_0005167 3300048928 Bacteria 14678
244 Ga0496126_0002224 3300048929 Bacteria 26840
245 Ga0501032_0037643 3300049569 Bacteria 3298
246 Ga0501033_0000930 3300049570 Bacteria 26737
247 Ga0501033_0019007 3300049570 Bacteria 5195
248 Ga0501047_0051109 3300049581 Bacteria 3992
249 Ga0501047_0069148 3300049581 Bacteria 3401
250 Ga0501047_0142917 3300049581 Bacteria 2271
251 Ga0501068_0036252 3300049584 Unclassified 2948
252 Ga0501072_0009956 3300049588 Bacteria 7231
253 Ga0501073_0037414 3300049589 Bacteria 3445
254 Ga0501074_0014855 3300049590 Bacteria 5662
255 Ga0501080_0005581 3300049742 Bacteria 11240
256 Ga0501083_0002256 3300049744 Bacteria 13184
257 Ga0501241_000003 3300049758 Bacteria 178857
258 Ga0501269_000126 3300049766 Bacteria 24145
259 Ga0501035_0003667 3300049822 Bacteria 14637
260 Ga0501044_0000686 3300049823 Bacteria 40958
261 nmdc:mga09592_30241_c1 3300050508 Bacteria 4506
262 nmdc:mga06r32_29467_c1 3300050510 Bacteria 5145
263 nmdc:mga08y16_118618_c1 3300050511 Bacteria 2754
264 nmdc:mga08y16_1320_c1 3300050511 Bacteria 24657
265 nmdc:mga08y16_6875_c1 3300050511 Bacteria 11929
266 Ga0500616_0001064 3300053153 Bacteria 28833
267 Ga0501084_0006825 3300054114 Bacteria 9394
268 2511232908 2511231000 Bacteria 4488346
269 2524004896 2523533629 Bacteria 2982326
270 2585143692 2582581278 Bacteria 5296881
271 2585157616 2582581281 Bacteria 4487904
272 2585162014 2582581282 Bacteria 4495830
273 2585425739 2582581873 Bacteria 3032664
274 2587679344 2585428045 Bacteria 5203023
275 2587747225 2585428060 Bacteria 5304711
276 2587751845 2585428061 Bacteria 3939663
277 2587867192 2585428095 Bacteria 3789702
278 2587945143 2585428115 Bacteria 4420269
279 2588210476 2585428182 Bacteria 5007281
280 2588214287 2585428183 Bacteria 5166119
281 2588217069 2585428184 Bacteria 4978681
282 2588223270 2585428185 Bacteria 4969476
283 2588232757 2585428187 Bacteria 4629388
284 2588443840 2588253712 Bacteria 5403181
285 2590601736 2588254255 Bacteria 5014294
286 2590613555 2588254257 Bacteria 5436094
287 2729200252 2728369107 Bacteria 5082720
288 2738699843 2738541273 Bacteria 4048577
289 2739253592 2738543014 Bacteria 4048139
290 2740059241 2739367874 Bacteria 4872888
291 2753673302 2751185877 Bacteria 4921427
292 2765574405 2765235839 Bacteria 5314748
293 2772607461 2772190705 Bacteria 4666226
294 2775671783 2775506739 Bacteria 3855222
295 2787509490 2786546548 Bacteria 4745694
296 2816874629 2816332188 Bacteria 5133218
297 2842085183 2842083920 Bacteria 4857652
298 2871722154 2871720351 Bacteria 4862476
299 2889295080 2889290771 Bacteria 5530962
300 2906001953 2905999023 Bacteria 4591259
301 2919098778 2919097161 Bacteria 3860339
302 2919402235 2919399522 Bacteria 5164947
303 2945925862 2945924605 Bacteria 4296724
304 2946022867 2946019816 Bacteria 4621265
305 2956898202 2956897341 Bacteria 5447711
306 2977244784 2977243572 Bacteria 4374394
307 2984573309 2984572630 Bacteria 4186940
308 2984606744 2984606641 Bacteria 4186971
309 2993376209 2993372514 Bacteria 4214139
310 2993483023 2993480792 Bacteria 4022225
311 Ga0307408_100048124
312 JGI24741J21665_1005171
313 rootH2_10037204
314 rootH1_10077897
315 Ga0065714_10064676
316 Ga0065704_10071161
317 Ga0065704_10078987
318 Ga0065704_10085525
319 Ga0070658_10014800
320 Ga0070690_100031322
321 Ga0070670_100031850
322 Ga0070670_100132808
323 Ga0070682_100000138
324 Ga0070689_100003414
325 Ga0070668_100090953
326 Ga0070688_100009055
327 Ga0070667_100003195
328 Ga0070698_100062424
329 Ga0070679_100016106
330 Ga0068853_100050422
331 Ga0070686_100002590
332 Ga0068855_100000030
333 Ga0068855_100020678
334 Ga0068857_100062006
335 Ga0068856_100000079
336 Ga0068856_100014217
337 Ga0068852_100045222
338 Ga0068859_100056491
339 Ga0068859_100215094
340 Ga0068861_100002847
341 Ga0068858_100137292
342 Ga0068860_100048274
343 Ga0081455_10008427
344 Ga0081455_10039771
345 Ga0075428_100004049
346 Ga0075428_100078941
347 Ga0068865_100007013
348 Ga0097620_100056495
349 Ga0097620_100215075
350 Ga0105244_10000001
351 Ga0105240_10021964
352 Ga0105240_10071829
353 Ga0111539_10001471
354 Ga0111539_10003860
355 Ga0111539_10042574
356 Ga0105245_10000292
357 Ga0105243_10001433
358 Ga0105242_10014901
359 Ga0105237_10003702
360 Ga0105238_10010063
361 Ga0105238_10011817
362 Ga0105249_10035755
363 Ga0157373_10000005
364 Ga0157371_10000052
365 Ga0157370_10002334
366 Ga0157369_10000355
367 Ga0157375_10003431
368 Ga0182008_10000037
369 Ga0182006_1000003
370 Ga0163161_10013292
371 Ga0209675_1000323
372 Ga0207655_1000018
373 Ga0207707_10116926
374 Ga0207695_10052894
375 Ga0207695_10063709
376 Ga0207695_10085988
377 Ga0207671_10005587
378 Ga0207663_10002254
379 Ga0207694_10009264
380 Ga0207694_10011782
381 Ga0207687_10000048
382 Ga0207686_10010680
383 Ga0207709_10001011
384 Ga0207670_10003129
385 Ga0207667_10000104
386 Ga0207712_10079324
387 Ga0207668_10022729
388 Ga0207658_10081477
389 Ga0207703_10058381
390 Ga0207702_10003055
391 Ga0207702_10052317
392 Ga0207702_10100030
393 Ga0207641_10005505
394 Ga0207641_10104018
395 Ga0207641_10125445
396 Ga0207676_10021333
397 Ga0207674_10096271
398 Ga0207675_100004903
399 Ga0207428_10010770
400 Ga0207428_10014404
401 Ga0207428_10091029
402 Ga0268264_10001831
403 Ga0265337_1000211
404 Ga0265337_1000980
405 Ga0265337_1001856
406 Ga0265326_10001037
407 Ga0265326_10003010
408 Ga0265319_1000202
409 Ga0265319_1005253
410 Ga0265334_10007945
411 Ga0265318_10002257
412 Ga0265318_10009151
413 Ga0265323_10000322
414 Ga0265323_10000910
415 Ga0265323_10015505
416 Ga0265322_10000172
417 Ga0265336_10000163
418 Ga0265338_10000160
419 Ga0265338_10000310
420 Ga0265338_10000475
421 Ga0265338_10000528
422 Ga0265338_10001064
423 Ga0265338_10001856
424 Ga0265338_10004158
425 Ga0265338_10005770
426 Ga0265338_10008287
427 Ga0265338_10011884
428 Ga0265338_10021233
429 Ga0265338_10041942
430 Ga0265338_10065546
431 Ga0265338_10068887
432 Ga0265324_10000595
433 Ga0265324_10002351
434 Ga0265324_10005448
435 Ga0265324_10005538
436 Ga0265324_10005623
437 Ga0265324_10007305
438 Ga0265330_10003608
439 Ga0265332_10004756
440 Ga0265328_10016859
441 Ga0265320_10005826
442 Ga0265320_10012589
443 Ga0265325_10011081
444 Ga0265329_10001545
445 Ga0265329_10004970
446 Ga0265340_10008655
447 Ga0265331_10000987
448 Ga0265327_10001087
449 Ga0265316_10017648
450 Ga0265316_10106863
451 Ga0307509_10016757
452 Ga0307408_100019377
453 Ga0265313_10005284
454 Ga0307508_10001440
455 Ga0265314_10000050
456 Ga0265314_10017230
457 Ga0265314_10074346
458 Ga0265342_10003225
459 Ga0316576_10000082
460 Ga0316576_10011103
461 Ga0316576_10037231
462 Ga0316578_10005106
463 Ga0307516_10028200
464 Ga0307413_10000638
465 Ga0307410_10067431
466 Ga0307406_10012093
467 Ga0307407_10001114
468 Ga0307412_10000062
469 Ga0307412_10000155
470 Ga0307412_10001478
471 Ga0307412_10037368
472 Ga0307409_100003077
473 Ga0307416_100000013
474 Ga0307416_100117701
475 Ga0307414_10000041
476 Ga0307414_10015055
477 Ga0307411_10001176
478 Ga0307411_10012566
479 Ga0373930_0001719
480 Ga0373929_0001338
481 Ga0373944_0000235
482 Ga0373932_0000001
483 Ga0316574_0002903
484 Ga0316574_0068665
485 Ga0373931_0000004
486 Ga0373947_0013760
487 Ga0373937_0030007
488 Ga0373937_0139799
489 Ga0373925_0000572
490 Ga0373925_0012494
491 Ga0395900_0155674
492 Ga0436365_1247076
493 Ga0439465_0000262
494 Ga0439445_0000623
495 Ga0451577_0000947
496 Ga0451577_0001087
497 Ga0451577_0002332
498 Ga0451577_0017512
499 Ga0451577_0093335
500 Ga0453683_0003623
501 Ga0453684_0000004
502 Ga0453684_0001615
503 Ga0453684_0003288
504 Ga0453684_0017937
505 Ga0453684_0050612
506 Ga0451576_0004382
507 Ga0451576_0014108
508 Ga0451576_0020414
509 Ga0451576_0039802
510 Ga0451576_0041284
511 Ga0451576_0114941
512 Ga0466967_0078235
513 Ga0495627_000068
514 Ga0495592_0000180
515 Ga0495596_0001332
516 Ga0495606_0057007
517 Ga0495610_0000006
518 Ga0495628_0000045
519 Ga0495632_0002092
520 Ga0495643_0059404
521 Ga0495663_0000110
522 Ga0495654_0000017
523 Ga0495640_0024174
524 Ga0495586_0000644
525 Ga0495609_0000017
526 Ga0495645_0006706
527 Ga0495633_0000037
528 Ga0495633_0003345
529 Ga0495668_0002080
530 Ga0495634_0001840
531 Ga0495625_0000501
532 Ga0495599_0005735
533 Ga0495680_0016217
534 Ga0495686_0000127
535 Ga0495686_0002112
536 Ga0496114_0038362
537 Ga0496115_0005011
538 Ga0496116_0000052
539 Ga0496117_0000082
540 Ga0496118_0000321
541 Ga0496119_0000006
542 Ga0496121_0055852
543 Ga0496122_0000230
544 Ga0496122_0001851
545 Ga0496122_0001875
546 Ga0496122_0002049
547 Ga0496123_0000476
548 Ga0496123_0008868
549 Ga0496124_0003570
550 Ga0496125_0000029
551 Ga0496125_0000778
552 Ga0496125_0001315
553 Ga0496125_0005167
554 Ga0496126_0002224
555 Ga0501032_0037643
556 Ga0501033_0000930
557 Ga0501033_0019007
558 Ga0501047_0051109
559 Ga0501047_0069148
560 Ga0501047_0142917
561 Ga0501068_0036252
562 Ga0501072_0009956
563 Ga0501073_0037414
564 Ga0501074_0014855
565 Ga0501080_0005581
566 Ga0501083_0002256
567 Ga0501241_000003
568 Ga0501269_000126
569 Ga0501035_0003667
570 Ga0501044_0000686
571 nmdc:mga09592_30241_c1
572 nmdc:mga06r32_29467_c1
573 nmdc:mga08y16_118618_c1
574 nmdc:mga08y16_1320_c1
575 nmdc:mga08y16_6875_c1
576 Ga0500616_0001064
577 Ga0501084_0006825
578 2511232908
579 2524004896
580 2585143692
581 2585157616
582 2585162014
583 2585425739
584 2587679344
585 2587747225
586 2587751845
587 2587867192
588 2587945143
589 2588210476
590 2588214287
591 2588217069
592 2588223270
593 2588232757
594 2588443840
595 2590601736
596 2590613555
597 2729200252
598 2738699843
599 2739253592
600 2740059241
601 2753673302
602 2765574405
603 2772607461
604 2775671783
605 2787509490
606 2816874629
607 2842085183
608 2871722154
609 2889295080
610 2906001953
611 2919098778
612 2919402235
613 2945925862
614 2946022867
615 2956898202
616 2977244784
617 2984573309
618 2984606744
619 2993376209
620 2993483023

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16326

ABC_tran_CTD

ABC transporter C-terminal domain

654

723

0.99

PF00005

ABC_tran

ABC transporter

152

310

0.96

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

277

342

0.94

PF12848

ABC_tran_Xtn

ABC transporter

349

427

0.93

PF00005

ABC_tran

ABC transporter

458

592

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ee6-assembly1.cif.gz_A cryo-em structure of human abca7 in pe/ch nanodiscs 0.8274 292 503
7z16-assembly1.cif.gz_J e. coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation 0.8248 293 496
5zxd-assembly1.cif.gz_A crystal structure of atp-bound human abcf1 0.8172 1 513
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.8142 295 496
8eeb-assembly1.cif.gz_A cryo-em structure of human abca7 in digitonin 0.8103 292 498
ID Description Score Start End Superfamily
af_Q2G091_283_549_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.892 258 517 3.40.50.300
af_O53916_1_235_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8819 2 241 3.40.50.300
af_O53916_1_235_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8677 2 241 3.40.50.300
af_P0A9U3_282_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8671 281 507 3.40.50.300
af_P63389_6_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8614 9 259 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7S1GC22-F1-model_v4 ABC transporter domain-containing protein 0.9213 392 514 GO:0005524
GO:0016887
GO:0045900
AF-A0A378MFW0-F1-model_v4 Uncharacterized ABC transporter ATP-binding protein YjjK 0.9063 275 510 GO:0005524
GO:0016887
AF-A0A3A0AZZ8-F1-model_v4 ABC transporter 0.9046 1 510 GO:0005524
GO:0016887
AF-A0A7S1GC22-F1-model_v4 ABC transporter domain-containing protein 0.9007 392 514 GO:0005524
GO:0016887
GO:0045900
AF-A0A2D9HPP8-F1-model_v4 Energy-dependent translational throttle protein EttA 0.8989 1 253 GO:0000049
GO:0005524
GO:0006412
GO:0016887
GO:0019843
GO:0045900

Map